Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0013037

Physical Location & Seq

Genomic Coordinates Reverse (-)

60387522 .. 60389855

Gene Structure 2334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G036670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGGCTGTTTCATCTTCATCTTCCTTCTTCTTCTTCTTCTTCTTCTTCCTTGTCCTCTGTCTCGTTCCTCTAACTTCATCTTTCTCAACTGACCAATCCGACGCTCACCGGACGTTCATCGTCCACGTGTCGAAATATTCCAAGCCTTCTGTTCTCCTCCCACCGCCGCTGCTCCTCTACACCTACTCACGCGCCGTCCATGGCTTCTCCGCCACGCTCTCCCCCTCCCAGGCCCACGCGCTCCACTCCCACCCCGCCGTCCTCTCCGTCGTCCCCGACATGCCGCGCCAGCTCCACACCACCCGCACCTACAACTTCCTCGGCCTCGCCGACAACTTCGGCCTCTGGCCCAACTCCGACTACGCGGACGACGTCATCATCGGAGTTCTCGACACCGGGATTTGGCCCGAGCGCCCGAGCTTCTCTGACTCGGGTCTGGGTCCCGTCCCGGAGACGTGGAAAGGCAAATGCGTGACCGCCGGCGACTTTCCGGCCTCCGCTTGTAACCGGAAGATCATCGGCGCCAGAGCTTATTTCAACGGCTACGAATCCCACCTCGGAAAACCCATGGACGAGTCCAACGAATCCAGATCCCCACGCGACACAGAAGGCCACGGCACCCACACAGCCTCCACCGCCGGCGGGTCTAGGGTTTCTAACGCCAGCTTCTACGAATACGCCTACGGCGAAGCCAGAGGCATGGCCAGCAAAGCCAGAATCGCAGCCTATAAAATCTGCTGGACTTTTGGTTGTTTCGATTCGGATATTCTCGCCGCCATGGACCAAGCAATCGCCGACGGAGTCCACATCATCTCGCTCTCCGTCGGAGCCAGCGGCGGAGCTCCGCCTTACGATCGCGACTCCATCGCAATCGGAGCTTTCGGCGCCGCCCAGCACGGCGTTCTGGTCTCGGCCTCTGCAGGAAACTCCGGGCCCGGCGCGTTTACCGCCACCAACATCGCTCCTTGGATCCTTACAGTCGGAGCTTCCACCCTTGACAGAGAGTTCCCAGCCGATGTCGTTTTGGGCGACGGCAGAGTCTTCAACGGCGTGTCGTTGTACTCCGGCGAGGGGCTAGTGGACTTCAAGCTCCCGCTAGTCTACGGCGGAGACTGCGGCAGTAGGTACTGCTATTCAGGGTCTCTGCAACCGTCAAAAGTACAAGGCAAGATCGTTGTTTGTGATCGTGGAGGTAACGCCAGAGTCGCCAAAGGCAGCGCCGTTAAGCTTGCAGGTGGGGTCGGAATGATAATGGCAAATACAGAAGAGAGCGGTGAGGAGCTTCTTGCTGATTCTCACCTCGTCCCAGCAGCAATGGTGGGTCAAATCGCTGCCGATCAGATAAGGAGCTACATCAGATTGGGGAACTATCCGACTGCAACGATCAAATTCCGAGGAACTGTAATTGGGCCTTCTCCACCATCGCCAAAGGTGGCTTCGTTTTCGAGCAGGGGTCCGAATTCTCTGACTCCGGAGATATTGAAACCCGATGTGATTGCTCCTGGAGTGAACATTCTAGCTGGGTGGACTGGTGCTTCTTCCCCTACTGATTTGGACATTGATTCGAGACGAGTTGAGTTCAATATAATTTCTGGCACATCCATGTCCTGCCCGCATGTTAGTGGCATTGCAGCTCTGCTTCGAAAGGCCTATCCGGAATGGTCTCCTGCTGCTATTAAATCCGCGTTGGTGACAACAGCTTATACTTTGGACAATTCCGGGAAGAAGATTGAGGATCTTGCAACTGGGAGAGAATCGACGCCTTTTGTTCATGGAGCCGGGCATGTTGATCCCAATAGGGCACTTAATCCGGGGTTGGTGTATGATATCAATGTGAATGACTATGTTGCATTCATGTGCTCGATTGGTTATGCTGGGGATGATATATGTGCCAGAAACAGTTTAACTAGTCCTGGTGATTTGAATTATCCGTCATTTGCAGTGGTGTTTAAGCCTGGCCAGGAGTTGGTGAAGTACAAGAGAGTTGTGACGAATGTTGGGAGTGTTGCTGATGCAGTTTATGAGGTAAATGTGGATGCTCCGGCGGGTGTTGAAATCAGTGTTGAGCCGAGTAAGCTGGTTTTCAGTGAAGAAAATCAGACTCAGAGTTATGAGGTTACATTTGCAAAAGGTGTTGGGTATGGAAATGGGGAGAGATATGGGTCGATTGAGTGGAGCAATGGGCATCACCATGTGAGGAGTCCAGTTGCTGTTAGGTGGAGCAACACTGGGTATTCAGCCTCCTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006508 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009653 GO:0010016 GO:0010150 GO:0010223 GO:0010346 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0070011 GO:0071704 GO:0071944 GO:0090693 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

749

Amino Acids

79.38

Weight (kDa)

5.96

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	52 - 99	2e-10	Peptidase inhibitor I9
Peptidase_S8	PF00082	123 - 578	5e-50	Subtilase family
PA	PF02225	364 - 448	3.9e-13	PA domain
fn3_6	PF17766	640 - 738	2.7e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14067
fragaria_vesca	FvH4_6g35010
malus_domestica	MD09G1180500.v1.1 MD17G1166500.v1.1
prunus_persica	Prupe.3G039000_v2.0.a1
pyrus_communis	pycom09g09790
rosa_chinensis	RchiOBHm_Chr2g0146061
rosa_laevigata	RLG00000020182
rosa_multiflora	Rmu_sc0010454.1_g000002 Rmu_sc0014682.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434860 Rroxscaffold_2G00100300
rosa_rugosa	Rorug02G0393600
rosa_samantha	Rh2AG449000 Rh2BG461400 Rh2CG436000 Rh2DG470600
rosa_wichuraiana	Rw2G036670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1223
AasI	GACNNNNNNGTC	1 cut(s)	1037
AatII	GACGTC	1 cut(s)	375
Acc36I	ACCTGC	1 cut(s)	1223
AccB1I	GGYRCC	3 cut(s)	521, 617, 884
AccB7I	CCANNNNNTGG	1 cut(s)	1966
AccBSI	CCGCTC	1 cut(s)	1272
AccI	GTMKAC	1 cut(s)	1101
AccII	CGCG	8 cut(s)	192, 239, 286, 365, 600, 858, 941, 1685
AccIII	TCCGGA	2 cut(s)	1471, 1654
AclWI	GGATC	5 cut(s)	585, 964, 977, 1743, 1784
AcoI	YGGCCR	2 cut(s)	702, 1957
AcsI	RAATTY	2 cut(s)	1388, 1459
AcvI	CACGTG	1 cut(s)	127
AcyI	GRCGYC	4 cut(s)	372, 522, 885, 1760
AdeI	CACNNNGTG	1 cut(s)	2194
AfaI	GTAC	4 cut(s)	1061, 1127, 1161, 1976
AfiI	CCNNNNNNNGG	5 cut(s)	229, 402, 642, 1071, 1966
AflIII	ACRYGT	1 cut(s)	126
AgsI	TTSAA	7 cut(s)	538, 1045, 1087, 1483, 1582, 1924, 2054
AhlI	ACTAGT	1 cut(s)	1907
AjiI	CACGTC	1 cut(s)	456
AjnI	CCWGG	5 cut(s)	228, 1501, 1912, 1954, 1959
AjuI	GAANNNNNNNTTGG	2 cut(s)	1420, 1452
Alw21I	GWGCWC	2 cut(s)	844, 1862
Alw26I	GTCTC	7 cut(s)	65, 446, 913, 1104, 1146, 1561, 1668
AlwI	GGATC	5 cut(s)	585, 964, 977, 1743, 1784
AlwNI	CAGNNNCTG	1 cut(s)	2210
Ama87I	CYCGRG	3 cut(s)	407, 415, 430
Aor13HI	TCCGGA	2 cut(s)	1471, 1654
ApaI	GGGCCC	1 cut(s)	936
ApeKI	GCWGC	7 cut(s)	169, 722, 1215, 1310, 1331, 1631, 1670
ApoI	RAATTY	2 cut(s)	1388, 1459
AspLEI	GCGC	8 cut(s)	194, 241, 288, 414, 524, 887, 941, 1220
AspS9I	GGNCC	9 cut(s)	232, 348, 405, 440, 781, 932, 933, 1409, 1454
AsuC2I	CCSGG	7 cut(s)	397, 449, 931, 936, 1720, 1780, 1812
AsuHPI	GGTGA	7 cut(s)	98, 1286, 1289, 1702, 1928, 1981, 2180
AsuII	TTCGAA	1 cut(s)	1642
AvaI	CYCGRG	3 cut(s)	407, 415, 430
AvaII	GGWCC	3 cut(s)	440, 781, 1454
BaeGI	GKGCMC	2 cut(s)	936, 1804
BalI	TGGCCA	2 cut(s)	704, 1959
BamHI	GGATCC	1 cut(s)	969
BanI	GGYRCC	3 cut(s)	521, 617, 884
BanII	GRGCYC	2 cut(s)	844, 936
BbrPI	CACGTG	1 cut(s)	127
BbsI	GAAGAC	1 cut(s)	1033
Bbv12I	GWGCWC	2 cut(s)	844, 1862
BbvI	GCAGC	7 cut(s)	156, 734, 1227, 1318, 1322, 1643, 1657
BccI	CCATC	2 cut(s)	872, 1429
BcgI	CGANNNNNNTGC	2 cut(s)	1478, 1512
BciT130I	CCWGG	5 cut(s)	230, 1503, 1914, 1956, 1961
BcnI	CCSGG	7 cut(s)	397, 449, 931, 936, 1720, 1780, 1812
BcoDI	GTCTC	7 cut(s)	65, 446, 913, 1104, 1146, 1561, 1668
BcuI	ACTAGT	1 cut(s)	1907
BfaI	CTAG	5 cut(s)	648, 1076, 1097, 1517, 1908
BfmI	CTRYAG	1 cut(s)	918
BfoI	RGCGCY	4 cut(s)	415, 525, 888, 1221
BfuAI	ACCTGC	1 cut(s)	1223
Bme18I	GGWCC	3 cut(s)	440, 781, 1454
BmeT110I	CYCGRG	3 cut(s)	407, 415, 430
BmgBI	CACGTC	1 cut(s)	456
BmgT120I	GGNCC	9 cut(s)	232, 348, 405, 440, 781, 932, 933, 1409, 1454
BmrI	ACTGGG	2 cut(s)	1755, 2238
BmsI	GCATC	3 cut(s)	2002, 2026, 2194
BmuI	ACTGGG	2 cut(s)	1755, 2238
BoxI	GACNNNNGTC	1 cut(s)	432
BpiI	GAAGAC	1 cut(s)	1033
BpmI	CTGGAG	1 cut(s)	1524
Bpu14I	TTCGAA	1 cut(s)	1642
BpuMI	CCSGG	7 cut(s)	397, 449, 931, 936, 1720, 1780, 1812
BsaAI	YACGTR	1 cut(s)	127
BsaHI	GRCGYC	4 cut(s)	372, 522, 885, 1760
BsaI	GGTCTC	3 cut(s)	913, 1146, 1668
BsaWI	WCCGGW	4 cut(s)	108, 507, 1471, 1654
BsaXI	ACNNNNNCTCC	2 cut(s)	614, 644
Bsc4I	CCNNNNNNNGG	5 cut(s)	229, 402, 642, 1071, 1966
Bse118I	RCCGGY	2 cut(s)	479, 638
Bse1I	ACTGG	4 cut(s)	1534, 1750, 2204, 2233
Bse3DI	GCAATG	3 cut(s)	1320, 1626, 2185
BseAI	TCCGGA	2 cut(s)	1471, 1654
BseBI	CCWGG	5 cut(s)	230, 1503, 1914, 1956, 1961
BseGI	GGATG	3 cut(s)	1598, 1885, 2041
BseLI	CCNNNNNNNGG	5 cut(s)	229, 402, 642, 1071, 1966
BseMI	GCAATG	3 cut(s)	1320, 1626, 2185
BseMII	CTCAG	1 cut(s)	2117
BseNI	ACTGG	4 cut(s)	1534, 1750, 2204, 2233
BseRI	GAGGAG	4 cut(s)	146, 164, 1292, 2212
BseSI	GKGCMC	2 cut(s)	936, 1804
BseXI	GCAGC	7 cut(s)	156, 734, 1227, 1318, 1322, 1643, 1657
BseYI	CCCAGC	5 cut(s)	891, 1009, 1306, 1520, 1874
Bsh1236I	CGCG	8 cut(s)	192, 239, 286, 365, 600, 858, 941, 1685
Bsh1285I	CGRYCG	1 cut(s)	856
BshNI	GGYRCC	3 cut(s)	521, 617, 884
BsiEI	CGRYCG	1 cut(s)	856
BsiHKAI	GWGCWC	2 cut(s)	844, 1862
BsiHKCI	CYCGRG	3 cut(s)	407, 415, 430
BslFI	GGGAC	4 cut(s)	257, 426, 431, 1289
BslI	CCNNNNNNNGG	5 cut(s)	229, 402, 642, 1071, 1966
BsmAI	GTCTC	7 cut(s)	65, 446, 913, 1104, 1146, 1561, 1668
BsmBI	CGTCTC	2 cut(s)	446, 1561
BsmFI	GGGAC	4 cut(s)	257, 426, 431, 1289
BsmI	GAATGC	1 cut(s)	1850
Bso31I	GGTCTC	3 cut(s)	913, 1146, 1668
BsoBI	CYCGRG	3 cut(s)	407, 415, 430
Bsp119I	TTCGAA	1 cut(s)	1642
Bsp120I	GGGCCC	1 cut(s)	932
Bsp1286I	GDGCHC	4 cut(s)	844, 936, 1804, 1862
Bsp13I	TCCGGA	2 cut(s)	1471, 1654
Bsp19I	CCATGG	3 cut(s)	199, 567, 777
Bsp68I	TCGCGA	1 cut(s)	858
BspCNI	CTCAG	1 cut(s)	2116
BspEI	TCCGGA	2 cut(s)	1471, 1654
BspFNI	CGCG	8 cut(s)	192, 239, 286, 365, 600, 858, 941, 1685
BspMAI	CTGCAG	1 cut(s)	922
BspMI	ACCTGC	1 cut(s)	1223
BspPI	GGATC	5 cut(s)	585, 964, 977, 1743, 1784
BspT104I	TTCGAA	1 cut(s)	1642
BspT107I	GGYRCC	3 cut(s)	521, 617, 884
BspTNI	GGTCTC	3 cut(s)	913, 1146, 1668
BsrBI	CCGCTC	1 cut(s)	1272
BsrDI	GCAATG	3 cut(s)	1320, 1626, 2185
BsrFI	RCCGGY	2 cut(s)	479, 638
BsrI	ACTGG	4 cut(s)	1534, 1750, 2204, 2233
BssAI	RCCGGY	2 cut(s)	479, 638
BssNI	GRCGYC	4 cut(s)	372, 522, 885, 1760
BssT1I	CCWWGG	4 cut(s)	199, 567, 777, 965
Bst2UI	CCWGG	5 cut(s)	230, 1503, 1914, 1956, 1961
Bst4CI	ACNGT	4 cut(s)	979, 1152, 1402, 1901
Bst6I	CTCTTC	1 cut(s)	1260
BstACI	GRCGYC	4 cut(s)	372, 522, 885, 1760
BstBAI	YACGTR	1 cut(s)	127
BstBI	TTCGAA	1 cut(s)	1642
BstC8I	GCNNGC	8 cut(s)	290, 481, 640, 664, 706, 832, 1230, 1613
BstDEI	CTNAG	1 cut(s)	2103
BstDSI	CCRYGG	4 cut(s)	199, 567, 613, 777
BstF5I	GGATG	3 cut(s)	1598, 1885, 2041
BstFNI	CGCG	8 cut(s)	192, 239, 286, 365, 600, 858, 941, 1685
BstH2I	RGCGCY	4 cut(s)	415, 525, 888, 1221
BstHHI	GCGC	8 cut(s)	194, 241, 288, 414, 524, 887, 941, 1220
BstMAI	GTCTC	7 cut(s)	65, 446, 913, 1104, 1146, 1561, 1668
BstMCI	CGRYCG	1 cut(s)	856
BstNI	CCWGG	5 cut(s)	230, 1503, 1914, 1956, 1961
BstNSI	RCATGY	3 cut(s)	283, 1619, 1787
BstPAI	GACNNNNGTC	1 cut(s)	432
BstSFI	CTRYAG	1 cut(s)	918
BstSLI	GKGCMC	2 cut(s)	936, 1804
BstUI	CGCG	8 cut(s)	192, 239, 286, 365, 600, 858, 941, 1685
BstV1I	GCAGC	7 cut(s)	156, 734, 1227, 1318, 1322, 1643, 1657
BstV2I	GAAGAC	1 cut(s)	1033
BstX2I	RGATCY	3 cut(s)	590, 969, 1735
BstXI	CCANNNNNNTGG	1 cut(s)	700
BstYI	RGATCY	3 cut(s)	590, 969, 1735
BtgI	CCRYGG	4 cut(s)	199, 567, 613, 777
BtgZI	GCGATG	3 cut(s)	850, 943, 1407
BtrI	CACGTC	1 cut(s)	456
BtsCI	GGATG	3 cut(s)	1598, 1885, 2041
BtsI	GCAGTG	1 cut(s)	1947
BtsIMutI	CAGTG	4 cut(s)	1947, 2065, 2092, 2226
BtuMI	TCGCGA	1 cut(s)	858
BveI	ACCTGC	1 cut(s)	1223
Cac8I	GCNNGC	8 cut(s)	290, 481, 640, 664, 706, 832, 1230, 1613
CaiI	CAGNNNCTG	1 cut(s)	2210
CfoI	GCGC	8 cut(s)	194, 241, 288, 414, 524, 887, 941, 1220
Cfr10I	RCCGGY	2 cut(s)	479, 638
Cfr13I	GGNCC	9 cut(s)	232, 348, 405, 440, 781, 932, 933, 1409, 1454
CseI	GACGC	2 cut(s)	110, 1768
Csp6I	GTAC	4 cut(s)	1060, 1126, 1160, 1975
CviQI	GTAC	4 cut(s)	1060, 1126, 1160, 1975
DdeI	CTNAG	1 cut(s)	2103
DinI	GGCGCC	2 cut(s)	523, 886
DraIII	CACNNNGTG	1 cut(s)	2194
DrdI	GACNNNNNNGTC	1 cut(s)	1037
DseDI	GACNNNNNNGTC	1 cut(s)	1037
EaeI	YGGCCR	2 cut(s)	702, 1957
Eam1104I	CTCTTC	1 cut(s)	1260
EarI	CTCTTC	1 cut(s)	1260
EciI	GGCGGA	4 cut(s)	199, 834, 852, 1122
Ecl136II	GAGCTC	1 cut(s)	842
Eco130I	CCWWGG	4 cut(s)	199, 567, 777, 965
Eco147I	AGGCCT	1 cut(s)	1649
Eco24I	GRGCYC	2 cut(s)	844, 936
Eco31I	GGTCTC	3 cut(s)	913, 1146, 1668
Eco32I	GATATC	1 cut(s)	1828
Eco47I	GGWCC	3 cut(s)	440, 781, 1454
Eco53kI	GAGCTC	1 cut(s)	842
Eco72I	CACGTG	1 cut(s)	127
Eco88I	CYCGRG	3 cut(s)	407, 415, 430
EcoICRI	GAGCTC	1 cut(s)	842
EcoO109I	RGGNCCY	1 cut(s)	440
EcoRI	GAATTC	1 cut(s)	1459
EcoRII	CCWGG	5 cut(s)	228, 1501, 1912, 1954, 1959
EcoRV	GATATC	1 cut(s)	1828
EcoT14I	CCWWGG	4 cut(s)	199, 567, 777, 965
EcoT38I	GRGCYC	2 cut(s)	844, 936
EgeI	GGCGCC	2 cut(s)	523, 886
EheI	GGCGCC	2 cut(s)	523, 886
ErhI	CCWWGG	4 cut(s)	199, 567, 777, 965
Esp3I	CGTCTC	2 cut(s)	446, 1561
FaqI	GGGAC	4 cut(s)	257, 426, 431, 1289
FauI	CCCGC	6 cut(s)	262, 311, 635, 1101, 1620, 2038
FblI	GTMKAC	1 cut(s)	1101
FokI	GGATG	3 cut(s)	1585, 1892, 2048
FriOI	GRGCYC	2 cut(s)	844, 936
FspBI	CTAG	5 cut(s)	648, 1076, 1097, 1517, 1908
GlaI	GCGC	8 cut(s)	193, 240, 287, 413, 523, 886, 940, 1219
GsaI	CCCAGC	5 cut(s)	895, 1013, 1310, 1524, 1878
GsuI	CTGGAG	1 cut(s)	1524
HaeII	RGCGCY	4 cut(s)	415, 525, 888, 1221
HgaI	GACGC	2 cut(s)	110, 1768
HhaI	GCGC	8 cut(s)	194, 241, 288, 414, 524, 887, 941, 1220
Hin1I	GRCGYC	4 cut(s)	372, 522, 885, 1760
Hin6I	GCGC	8 cut(s)	192, 239, 286, 412, 522, 885, 939, 1218
HinP1I	GCGC	8 cut(s)	192, 239, 286, 412, 522, 885, 939, 1218
HindIII	AAGCTT	1 cut(s)	1226
HphI	GGTGA	7 cut(s)	98, 1286, 1289, 1702, 1928, 1981, 2180
Hpy166II	GTNNAC	7 cut(s)	124, 805, 945, 1081, 1102, 1510, 1527
Hpy188III	TCNNGA	6 cut(s)	389, 588, 857, 1472, 1566, 1655
Hpy8I	GTNNAC	7 cut(s)	124, 805, 945, 1081, 1102, 1510, 1527
Hpy99I	CGWCG	7 cut(s)	104, 272, 374, 800, 827, 1034, 1762
HpyAV	CCTTC	4 cut(s)	34, 156, 602, 1422
HpyCH4III	ACNGT	4 cut(s)	979, 1152, 1402, 1901
HpyCH4IV	ACGT	4 cut(s)	113, 126, 372, 455
HpyF3I	CTNAG	1 cut(s)	2103
HpySE526I	ACGT	4 cut(s)	113, 126, 372, 455
Hsp92I	GRCGYC	4 cut(s)	372, 522, 885, 1760
HspAI	GCGC	8 cut(s)	192, 239, 286, 412, 522, 885, 939, 1218
KasI	GGCGCC	2 cut(s)	521, 884
KflI	GGGWCCC	1 cut(s)	440
Kpn2I	TCCGGA	2 cut(s)	1471, 1654
KroI	GCCGGC	2 cut(s)	479, 638
KroNI	GCCGGC	2 cut(s)	481, 640
Lsp1109I	GCAGC	7 cut(s)	156, 734, 1227, 1318, 1322, 1643, 1657
LweI	GCATC	3 cut(s)	2002, 2026, 2194
MaeI	CTAG	5 cut(s)	648, 1076, 1097, 1517, 1908
MaeII	ACGT	4 cut(s)	113, 126, 372, 455
MaeIII	GTNAC	6 cut(s)	472, 503, 1193, 1690, 1987, 2116
MbiI	CCGCTC	1 cut(s)	1272
MflI	RGATCY	3 cut(s)	590, 969, 1735
MhlI	GDGCHC	4 cut(s)	844, 936, 1804, 1862
MlsI	TGGCCA	2 cut(s)	704, 1959
MluCI	AATT	6 cut(s)	1388, 1404, 1459, 1587, 1714, 1924
MluNI	TGGCCA	2 cut(s)	704, 1959
Mly113I	GGCGCC	2 cut(s)	522, 885
MlyI	GAGTC	9 cut(s)	422, 584, 810, 854, 1047, 1212, 1462, 2095, 2209
MmeI	TCCRAC	7 cut(s)	123, 381, 603, 805, 961, 1222, 1397
Mox20I	TGGCCA	2 cut(s)	704, 1959
MreI	CGCCGGCG	2 cut(s)	479, 638
MroI	TCCGGA	2 cut(s)	1471, 1654
MroNI	GCCGGC	2 cut(s)	479, 638
MscI	TGGCCA	2 cut(s)	704, 1959
MseI	TTAA	5 cut(s)	1224, 1677, 1806, 1904, 1950
MslI	CAYNNNNRTG	4 cut(s)	1601, 1620, 1855, 2190
Msp20I	TGGCCA	2 cut(s)	704, 1959
MspA1I	CMGCKG	2 cut(s)	169, 834
Mva1269I	GAATGC	1 cut(s)	1850
MvaI	CCWGG	5 cut(s)	230, 1503, 1914, 1956, 1961
MvnI	CGCG	8 cut(s)	192, 239, 286, 365, 600, 858, 941, 1685
NaeI	GCCGGC	2 cut(s)	481, 640
NarI	GGCGCC	2 cut(s)	522, 885
NciI	CCSGG	7 cut(s)	397, 449, 931, 936, 1720, 1780, 1812
NcoI	CCATGG	3 cut(s)	199, 567, 777
NgoMIV	GCCGGC	2 cut(s)	479, 638
NmeAIII	GCCGAG	3 cut(s)	300, 890, 2094
NmuCI	GTSAC	3 cut(s)	472, 1690, 1987
NruI	TCGCGA	1 cut(s)	858
NspI	RCATGY	3 cut(s)	283, 1619, 1787
NspV	TTCGAA	1 cut(s)	1642
PaqCI	CACCTGC	1 cut(s)	1223
PceI	AGGCCT	1 cut(s)	1649
PcsI	WCGNNNNNNNCGW	6 cut(s)	327, 369, 387, 579, 684, 1026
PctI	GAATGC	1 cut(s)	1850
PdiI	GCCGGC	2 cut(s)	481, 640
PfeI	GAWTC	7 cut(s)	548, 584, 717, 758, 1292, 1562, 1754
PflFI	GACNNNGTC	2 cut(s)	371, 800
PflMI	CCANNNNNTGG	1 cut(s)	1966
PfoI	TCCNGGA	3 cut(s)	447, 1501, 1718
Ple19I	CGATCG	1 cut(s)	856
PleI	GAGTC	9 cut(s)	422, 583, 809, 854, 1046, 1211, 1462, 2095, 2208
PluTI	GGCGCC	2 cut(s)	525, 888
PmaCI	CACGTG	1 cut(s)	127
PmlI	CACGTG	1 cut(s)	127
PpsI	GAGTC	9 cut(s)	422, 583, 809, 854, 1046, 1211, 1462, 2095, 2208
Ppu21I	YACGTR	1 cut(s)	127
PpuMI	RGGWCCY	1 cut(s)	440
PshAI	GACNNNNGTC	1 cut(s)	432
Psp124BI	GAGCTC	1 cut(s)	844
Psp5II	RGGWCCY	1 cut(s)	440
Psp6I	CCWGG	5 cut(s)	228, 1501, 1912, 1954, 1959
PspCI	CACGTG	1 cut(s)	127
PspFI	CCCAGC	5 cut(s)	891, 1009, 1306, 1520, 1874
PspGI	CCWGG	5 cut(s)	228, 1501, 1912, 1954, 1959
PspOMI	GGGCCC	1 cut(s)	932
PspPI	GGNCC	9 cut(s)	232, 348, 405, 440, 781, 932, 933, 1409, 1454
PspPPI	RGGWCCY	1 cut(s)	440
PstI	CTGCAG	1 cut(s)	922
PstNI	CAGNNNCTG	1 cut(s)	2210
PsuI	RGATCY	3 cut(s)	590, 969, 1735
PsyI	GACNNNGTC	2 cut(s)	371, 800
PvuI	CGATCG	1 cut(s)	856
RruI	TCGCGA	1 cut(s)	858
RsaI	GTAC	4 cut(s)	1061, 1127, 1161, 1976
RsaNI	GTAC	4 cut(s)	1060, 1126, 1160, 1975
RseI	CAYNNNNRTG	4 cut(s)	1601, 1620, 1855, 2190
SacI	GAGCTC	1 cut(s)	844
SaqAI	TTAA	5 cut(s)	1224, 1677, 1806, 1904, 1950
Sau96I	GGNCC	9 cut(s)	232, 348, 405, 440, 781, 932, 933, 1409, 1454
SchI	GAGTC	9 cut(s)	422, 584, 810, 854, 1047, 1212, 1462, 2095, 2209
SduI	GDGCHC	4 cut(s)	844, 936, 1804, 1862
SfaNI	GCATC	3 cut(s)	2002, 2026, 2194
SfcI	CTRYAG	1 cut(s)	918
SfoI	GGCGCC	2 cut(s)	523, 886
SfuI	TTCGAA	1 cut(s)	1642
SgrAI	CRCCGGYG	2 cut(s)	479, 638
SinI	GGWCC	3 cut(s)	440, 781, 1454
SmiMI	CAYNNNNRTG	4 cut(s)	1601, 1620, 1855, 2190
SpeI	ACTAGT	1 cut(s)	1907
Sse9I	AATT	6 cut(s)	1388, 1404, 1459, 1587, 1714, 1924
SseBI	AGGCCT	1 cut(s)	1649
SspDI	GGCGCC	2 cut(s)	521, 884
SspI	AATATT	1 cut(s)	137
SspMI	CTAG	5 cut(s)	648, 1076, 1097, 1517, 1908
SstI	GAGCTC	1 cut(s)	844
StuI	AGGCCT	1 cut(s)	1649
StyI	CCWWGG	4 cut(s)	199, 567, 777, 965
TaaI	ACNGT	4 cut(s)	979, 1152, 1402, 1901
TaiI	ACGT	4 cut(s)	116, 129, 375, 458
TaqI	TCGA	9 cut(s)	131, 390, 756, 1445, 1565, 1642, 1757, 1862, 2165
TasI	AATT	6 cut(s)	1388, 1404, 1459, 1587, 1714, 1924
TatI	WGTACW	3 cut(s)	1059, 1159, 1974
TauI	GCSGC	6 cut(s)	169, 286, 776, 837, 890, 1119
TfiI	GAWTC	7 cut(s)	548, 584, 717, 758, 1292, 1562, 1754
Tru1I	TTAA	5 cut(s)	1224, 1677, 1806, 1904, 1950
Tru9I	TTAA	5 cut(s)	1224, 1677, 1806, 1904, 1950
TscAI	CASTG	4 cut(s)	1947, 2065, 2092, 2233
TseFI	GTSAC	3 cut(s)	472, 1690, 1987
TseI	GCWGC	7 cut(s)	169, 722, 1215, 1310, 1331, 1631, 1670
Tsp45I	GTSAC	3 cut(s)	472, 1690, 1987
TspDTI	ATGAA	5 cut(s)	6, 66, 106, 1760, 1843
TspGWI	ACGGA	4 cut(s)	256, 811, 813, 1920
TspRI	CASTG	4 cut(s)	1947, 2065, 2092, 2233
Tth111I	GACNNNGTC	2 cut(s)	371, 800
Van91I	CCANNNNNTGG	1 cut(s)	1966
VpaK11BI	GGWCC	3 cut(s)	440, 781, 1454
XapI	RAATTY	2 cut(s)	1388, 1459
XceI	RCATGY	3 cut(s)	283, 1619, 1787
XmiI	GTMKAC	1 cut(s)	1101
XspI	CTAG	5 cut(s)	648, 1076, 1097, 1517, 1908
ZraI	GACGTC	1 cut(s)	373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.