Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013037

Physical Location & Seq

Genomic Coordinates Reverse (-)

62163149 .. 62165592

Gene Structure 2444 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020182

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGGCTGTTTCATCTTCATCTCCCTTCATCTTCTTCTTCTTCCTTGTCCTCTGTCTCGTTCATGTAACTTCTTTGCCAACTGACCAATCCGACGGTCACCGTACGTTCATCGTCCACTTGTCGAAATATTCCAAGCCTGCTCTCTTCTCCTCCCACCGCCGCTGGTACACCTCCATCCTCCGCTCCCTCCCTCCTTCCCCTCACCCCACCAAGCTCCTCTACACCTACTCACGCGCCGTCCATGGCTTCTCCGCCACGCTCTCCCCTTCCCAGGCCCACGCGCTCCAGTCCCACCCCGCCGTCCTCTCCGTCGTCCCCGACATGCCCCGCCAGCTCCACACCACCCGCACCTACAACTTCCTCGGCCTCGCCGACAACTTCGGCCTCTGGCCCAACTCCGACTACGCGGACGACGTCATCATCGGAGTTCTCGACACCGGGATTTGGCCCGAGCGCCCGAGCTTCTCTGACTCGGGTCTGGGTCCTGTTCCGAAGACATGGAAAGGCAAATGCGTGACCGCCGGCGACTTTCCGGCCTCCGCTTGTAACCGGAAGATCATCGGCGCCAGAGCTTATTTCAACGGCTACGAATCCCACCTCGGAAAACCCATGGACGAGTCCAACGAATCCAGATCCCCACGCGACACAGAAGGCCACGGCACCCACACAGCCTCCACCGCCGGCGGGTCTAGGGTTTCTAACGCCAGCTTCTACGAATACGCCTACGGCGAAGCCAGAGGTATGGCCAGCAAAGCCAGAATCGCCGCCTATAAAATCTGCTGGACTTTTGGTTGTTTCGATTCGGATATTCTCGCCGCCATGGACCAAGCAATCGCCGACGGAGTCCACATAATCTCTCTCTCCGTCGGAGCCAGCGGCGGAGCTCCGCCTTACGATCGCGACTCCATCGCAATCGGAGCTTTCGGTGCGGCCCAGCACGGCGTTCTGGTCTCGGCCTCTGCAGGAAACTCCGGGCCCGGCGCATTTACCGCCACCAACATCGCTCCTTGGATCCTTACAGTCGGAGCTTCCACTCTTGACAGAGAGTTCCCAGCCGATGTCGTTTTGGGCGACGGCAGAGTCTTCAACGGCGTGTCGTTGTACTCGGGCGAGGGTCTAGTGGACTTCAAGCTCCCGTTAGTCTACGGCGGAGACTGCGGCAGTAGGTACTGCTATGCAGGGTATCTGCAACCGTCAAAAGTACAAGGCAAGATCGTTGTTTGTGATCGTGGAGGTAACGCCAGAGTCGCCAAAGGCAGCGCCGTTAAGCTTGCGGGTGGGATCGGAATGATAATGGCCAACACTGAAGAGAGCGGTGAAGAGCTTCTTGCTGATTCTCACCTCGTCCCAGCAACAATGGTGGGTCAAATCGCTGCCGATCAGATAAGGAACTACATCAGATTGGGGAACTATCCGACTGCAACGATCAAATTCCGAGGAACTGTGATTGGGCCTTCTCCCCCATCGCCAAAGGTAGCTTCGTTTTCGAGCAGGGGTCCGAATTCTCTGACTCCGGAGATATTGAAACCCGATGTGATTGCTCCTGGAGTGAACATTCTAGCTGGGTGGACTGGTGCTTCTTCCCCTACTGATTTGGACATTGATCCGAGACGAGTTGAGTTCAATATAATTTCTGGCACGTCCATGTCCTGCCCGCATGTTAGTGGCATTGCAGCTCTGCTTCGAAAGGCCTATCCGGAATGGTCTCCTGCTGCTATTAAATCCGCATTGGTGACAACAGCTTATACTTTGGACAATTCCGGGAAGAAAATTGAGGATCTTGCAAATGGGAGAGAATCGACACCTTTTGTTCATGGAGCCGGGCATGTTGATCCCAATAGGGCACTTAATCCCGGGTTGGTGTATGATATCAATGTGAATGACTATGTTGCATTCATGTGCTCGATTGGTTATGGTCCTAGGCAGATAGCTGTTTTCGTGAGAGAGTTAGCTGGGGATGATGTATGTGCTAGAAACAGTTTAGCTAGTCCTGGTGATTTGAATTATCCGTCATTTGCAGTGGTGTTTAAGCCTGGCCAGGAGTTGGTGAAGTACAAGAGAGTTGTGACGAATGTTGGGAGTGTTGCTGATGCAGTTTATGAGGTAAATGTGGATGCTCCGGCGGGTGTTGAAATCAGTGTTGAGCCGAGTAAGCTGGTTTTCAGTGAAGAAAATCAGACTCAGAGTTATGAGGTTACATTTGCGAAAAGTGTTGGGTATGGAAATGGGGAGAGATATGGGTCGATTGAGTGGAGCAATGGGCATCACCATGTGAGGAGTCCAGTTGCTGTTAGGTGGAGCAATACTGGCCCCTGTGTAAATTTTACGATTGTGGTTTCAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006508 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009653 GO:0010016 GO:0010150 GO:0010223 GO:0010346 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0070011 GO:0071704 GO:0071944 GO:0090693 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

782

Amino Acids

83.17

Weight (kDa)

6.6

Isoelectric Point (pI)

37.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	35 - 113	1.2e-18	Peptidase inhibitor I9
Peptidase_S8	PF00082	137 - 592	1.7e-50	Subtilase family
PA	PF02225	378 - 462	9e-14	PA domain
fn3_6	PF17766	666 - 764	1.6e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14067
fragaria_vesca	FvH4_6g35010
malus_domestica	MD09G1180500.v1.1 MD17G1166500.v1.1
prunus_persica	Prupe.3G039000_v2.0.a1
pyrus_communis	pycom09g09790
rosa_chinensis	RchiOBHm_Chr2g0146061
rosa_laevigata	RLG00000020182
rosa_multiflora	Rmu_sc0010454.1_g000002 Rmu_sc0014682.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434860 Rroxscaffold_2G00100300
rosa_rugosa	Rorug02G0393600
rosa_samantha	Rh2AG449000 Rh2BG461400 Rh2CG436000 Rh2DG470600
rosa_wichuraiana	Rw2G036670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1079
AatII	GACGTC	1 cut(s)	417
AccB1I	GGYRCC	2 cut(s)	563, 659
AccB7I	CCANNNNNTGG	1 cut(s)	2044
AccBSI	CCGCTC	2 cut(s)	183, 1314
AccI	GTMKAC	1 cut(s)	1143
AccII	CGCG	5 cut(s)	234, 281, 407, 642, 900
AccIII	TCCGGA	2 cut(s)	1513, 1696
AclWI	GGATC	7 cut(s)	627, 1006, 1019, 1289, 1598, 1785, 1826
AcoI	YGGCCR	3 cut(s)	744, 1296, 2035
AcsI	RAATTY	3 cut(s)	1430, 1501, 2320
AcuI	CTGAAG	1 cut(s)	1326
AcyI	GRCGYC	2 cut(s)	414, 564
AdeI	CACNNNGTG	1 cut(s)	2272
AfaI	GTAC	6 cut(s)	103, 167, 1103, 1169, 1203, 2054
AfiI	CCNNNNNNNGG	4 cut(s)	271, 444, 684, 2044
AgsI	TTSAA	7 cut(s)	580, 1087, 1129, 1525, 1624, 2002, 2132
AjiI	CACGTC	1 cut(s)	1641
AjnI	CCWGG	5 cut(s)	270, 1543, 1990, 2032, 2037
AjuI	GAANNNNNNNTTGG	2 cut(s)	1462, 1494
Alw21I	GWGCWC	2 cut(s)	886, 1904
Alw26I	GTCTC	5 cut(s)	59, 955, 1146, 1603, 1710
AlwI	GGATC	7 cut(s)	627, 1006, 1019, 1289, 1598, 1785, 1826
AlwNI	CAGNNNCTG	1 cut(s)	2288
Ama87I	CYCGRG	5 cut(s)	449, 457, 472, 1105, 1853
Aor13HI	TCCGGA	2 cut(s)	1513, 1696
ApaI	GGGCCC	1 cut(s)	978
ApeKI	GCWGC	4 cut(s)	1257, 1373, 1673, 1712
ApoI	RAATTY	3 cut(s)	1430, 1501, 2320
Asp700I	GAANNNNTTC	1 cut(s)	1323
AspA2I	CCTAGG	1 cut(s)	1919
AspLEI	GCGC	6 cut(s)	236, 283, 456, 566, 983, 1262
AsuC2I	CCSGG	7 cut(s)	439, 973, 978, 1762, 1822, 1854, 1855
AsuHPI	GGTGA	8 cut(s)	89, 194, 1328, 1331, 1744, 2006, 2059, 2258
AsuII	TTCGAA	1 cut(s)	1684
AvaI	CYCGRG	5 cut(s)	449, 457, 472, 1105, 1853
AvaII	GGWCC	4 cut(s)	482, 823, 1496, 1916
AvrII	CCTAGG	1 cut(s)	1919
BaeGI	GKGCMC	2 cut(s)	978, 1846
BalI	TGGCCA	3 cut(s)	746, 1298, 2037
BamHI	GGATCC	1 cut(s)	1011
BanI	GGYRCC	2 cut(s)	563, 659
BanII	GRGCYC	2 cut(s)	886, 978
BbsI	GAAGAC	2 cut(s)	500, 1075
Bbv12I	GWGCWC	2 cut(s)	886, 1904
BbvI	GCAGC	4 cut(s)	1269, 1360, 1685, 1699
BccI	CCATC	3 cut(s)	182, 914, 1471
BcgI	CGANNNNNNTGC	2 cut(s)	1520, 1554
BciT130I	CCWGG	5 cut(s)	272, 1545, 1992, 2034, 2039
BcnI	CCSGG	7 cut(s)	439, 973, 978, 1762, 1822, 1854, 1855
BcoDI	GTCTC	5 cut(s)	59, 955, 1146, 1603, 1710
BfaI	CTAG	6 cut(s)	690, 1118, 1559, 1920, 1971, 1986
BfmI	CTRYAG	1 cut(s)	960
BfoI	RGCGCY	3 cut(s)	457, 567, 1263
BlnI	CCTAGG	1 cut(s)	1919
Bme18I	GGWCC	4 cut(s)	482, 823, 1496, 1916
BmeT110I	CYCGRG	5 cut(s)	449, 457, 472, 1105, 1853
BmgBI	CACGTC	1 cut(s)	1641
BmiI	GGNNCC	9 cut(s)	483, 565, 661, 871, 976, 1013, 1497, 1819, 2311
BmsI	GCATC	3 cut(s)	2080, 2104, 2272
BoxI	GACNNNNGTC	1 cut(s)	474
BpiI	GAAGAC	2 cut(s)	500, 1075
BpmI	CTGGAG	2 cut(s)	269, 1566
Bpu14I	TTCGAA	1 cut(s)	1684
BpuMI	CCSGG	7 cut(s)	439, 973, 978, 1762, 1822, 1854, 1855
BsaHI	GRCGYC	2 cut(s)	414, 564
BsaI	GGTCTC	2 cut(s)	955, 1710
BsaWI	WCCGGW	3 cut(s)	549, 1513, 1696
BsaXI	ACNNNNNCTCC	2 cut(s)	656, 686
Bsc4I	CCNNNNNNNGG	4 cut(s)	271, 444, 684, 2044
Bse118I	RCCGGY	2 cut(s)	521, 680
Bse1I	ACTGG	4 cut(s)	286, 1576, 2282, 2311
Bse3DI	GCAATG	2 cut(s)	1668, 2263
BseAI	TCCGGA	2 cut(s)	1513, 1696
BseBI	CCWGG	5 cut(s)	272, 1545, 1992, 2034, 2039
BseGI	GGATG	3 cut(s)	174, 1963, 2119
BseLI	CCNNNNNNNGG	4 cut(s)	271, 444, 684, 2044
BseMI	GCAATG	2 cut(s)	1668, 2263
BseMII	CTCAG	1 cut(s)	2195
BseNI	ACTGG	4 cut(s)	286, 1576, 2282, 2311
BseRI	GAGGAG	3 cut(s)	139, 206, 2290
BseSI	GKGCMC	2 cut(s)	978, 1846
BseXI	GCAGC	4 cut(s)	1269, 1360, 1685, 1699
BseYI	CCCAGC	5 cut(s)	933, 1051, 1348, 1562, 1952
Bsh1236I	CGCG	5 cut(s)	234, 281, 407, 642, 900
Bsh1285I	CGRYCG	1 cut(s)	898
BshNI	GGYRCC	2 cut(s)	563, 659
BsiEI	CGRYCG	1 cut(s)	898
BsiHKAI	GWGCWC	2 cut(s)	886, 1904
BsiHKCI	CYCGRG	5 cut(s)	449, 457, 472, 1105, 1853
BsiWI	CGTACG	1 cut(s)	101
BslFI	GGGAC	3 cut(s)	274, 299, 1331
BslI	CCNNNNNNNGG	4 cut(s)	271, 444, 684, 2044
BsmAI	GTCTC	5 cut(s)	59, 955, 1146, 1603, 1710
BsmBI	CGTCTC	1 cut(s)	1603
BsmFI	GGGAC	3 cut(s)	274, 299, 1331
BsmI	GAATGC	1 cut(s)	1892
Bso31I	GGTCTC	2 cut(s)	955, 1710
BsoBI	CYCGRG	5 cut(s)	449, 457, 472, 1105, 1853
Bsp119I	TTCGAA	1 cut(s)	1684
Bsp120I	GGGCCC	1 cut(s)	974
Bsp1286I	GDGCHC	4 cut(s)	886, 978, 1846, 1904
Bsp13I	TCCGGA	2 cut(s)	1513, 1696
Bsp19I	CCATGG	3 cut(s)	241, 609, 819
Bsp68I	TCGCGA	1 cut(s)	900
BspCNI	CTCAG	1 cut(s)	2194
BspEI	TCCGGA	2 cut(s)	1513, 1696
BspFNI	CGCG	5 cut(s)	234, 281, 407, 642, 900
BspLI	GGNNCC	9 cut(s)	483, 565, 661, 871, 976, 1013, 1497, 1819, 2311
BspMAI	CTGCAG	1 cut(s)	964
BspPI	GGATC	7 cut(s)	627, 1006, 1019, 1289, 1598, 1785, 1826
BspQI	GCTCTTC	1 cut(s)	1314
BspT104I	TTCGAA	1 cut(s)	1684
BspT107I	GGYRCC	2 cut(s)	563, 659
BspTNI	GGTCTC	2 cut(s)	955, 1710
BsrBI	CCGCTC	2 cut(s)	183, 1314
BsrDI	GCAATG	2 cut(s)	1668, 2263
BsrFI	RCCGGY	2 cut(s)	521, 680
BsrI	ACTGG	4 cut(s)	286, 1576, 2282, 2311
BssAI	RCCGGY	2 cut(s)	521, 680
BssNI	GRCGYC	2 cut(s)	414, 564
BssT1I	CCWWGG	5 cut(s)	241, 609, 819, 1007, 1919
Bst2UI	CCWGG	5 cut(s)	272, 1545, 1992, 2034, 2039
Bst4CI	ACNGT	6 cut(s)	95, 101, 1021, 1194, 1444, 1979
Bst6I	CTCTTC	3 cut(s)	149, 1302, 1314
BstACI	GRCGYC	2 cut(s)	414, 564
BstBI	TTCGAA	1 cut(s)	1684
BstC8I	GCNNGC	9 cut(s)	138, 332, 523, 682, 706, 748, 874, 1272, 1655
BstDEI	CTNAG	1 cut(s)	2181
BstDSI	CCRYGG	4 cut(s)	241, 609, 655, 819
BstEII	GGTNACC	1 cut(s)	95
BstF5I	GGATG	3 cut(s)	174, 1963, 2119
BstFNI	CGCG	5 cut(s)	234, 281, 407, 642, 900
BstH2I	RGCGCY	3 cut(s)	457, 567, 1263
BstHHI	GCGC	6 cut(s)	236, 283, 456, 566, 983, 1262
BstMAI	GTCTC	5 cut(s)	59, 955, 1146, 1603, 1710
BstMCI	CGRYCG	1 cut(s)	898
BstNI	CCWGG	5 cut(s)	272, 1545, 1992, 2034, 2039
BstNSI	RCATGY	3 cut(s)	325, 1661, 1829
BstPAI	GACNNNNGTC	1 cut(s)	474
BstPI	GGTNACC	1 cut(s)	95
BstSFI	CTRYAG	1 cut(s)	960
BstSLI	GKGCMC	2 cut(s)	978, 1846
BstUI	CGCG	5 cut(s)	234, 281, 407, 642, 900
BstV1I	GCAGC	4 cut(s)	1269, 1360, 1685, 1699
BstV2I	GAAGAC	2 cut(s)	500, 1075
BstX2I	RGATCY	3 cut(s)	632, 1011, 1777
BstXI	CCANNNNNNTGG	1 cut(s)	742
BstYI	RGATCY	3 cut(s)	632, 1011, 1777
BtgI	CCRYGG	4 cut(s)	241, 609, 655, 819
BtgZI	GCGATG	3 cut(s)	892, 985, 1449
BtrI	CACGTC	1 cut(s)	1641
BtsCI	GGATG	3 cut(s)	174, 1963, 2119
BtsI	GCAGTG	1 cut(s)	2025
BtsIMutI	CAGTG	4 cut(s)	1302, 2025, 2143, 2170
BtuMI	TCGCGA	1 cut(s)	900
Cac8I	GCNNGC	9 cut(s)	138, 332, 523, 682, 706, 748, 874, 1272, 1655
CaiI	CAGNNNCTG	1 cut(s)	2288
CfoI	GCGC	6 cut(s)	236, 283, 456, 566, 983, 1262
Cfr10I	RCCGGY	2 cut(s)	521, 680
Cfr9I	CCCGGG	1 cut(s)	1853
Csp6I	GTAC	6 cut(s)	102, 166, 1102, 1168, 1202, 2053
CspCI	CAANNNNNGTGG	2 cut(s)	1341, 1376
CviQI	GTAC	6 cut(s)	102, 166, 1102, 1168, 1202, 2053
DdeI	CTNAG	1 cut(s)	2181
DinI	GGCGCC	1 cut(s)	565
DraIII	CACNNNGTG	1 cut(s)	2272
DrdI	GACNNNNNNGTC	1 cut(s)	1079
DseDI	GACNNNNNNGTC	1 cut(s)	1079
EaeI	YGGCCR	3 cut(s)	744, 1296, 2035
Eam1104I	CTCTTC	3 cut(s)	149, 1302, 1314
EarI	CTCTTC	3 cut(s)	149, 1302, 1314
EciI	GGCGGA	4 cut(s)	241, 876, 894, 1164
Ecl136II	GAGCTC	1 cut(s)	884
Eco130I	CCWWGG	5 cut(s)	241, 609, 819, 1007, 1919
Eco147I	AGGCCT	1 cut(s)	1691
Eco24I	GRGCYC	2 cut(s)	886, 978
Eco31I	GGTCTC	2 cut(s)	955, 1710
Eco32I	GATATC	1 cut(s)	1870
Eco47I	GGWCC	4 cut(s)	482, 823, 1496, 1916
Eco53kI	GAGCTC	1 cut(s)	884
Eco57I	CTGAAG	1 cut(s)	1326
Eco88I	CYCGRG	5 cut(s)	449, 457, 472, 1105, 1853
Eco91I	GGTNACC	1 cut(s)	95
EcoICRI	GAGCTC	1 cut(s)	884
EcoO109I	RGGNCCY	1 cut(s)	482
EcoO65I	GGTNACC	1 cut(s)	95
EcoRI	GAATTC	1 cut(s)	1501
EcoRII	CCWGG	5 cut(s)	270, 1543, 1990, 2032, 2037
EcoRV	GATATC	1 cut(s)	1870
EcoT14I	CCWWGG	5 cut(s)	241, 609, 819, 1007, 1919
EcoT38I	GRGCYC	2 cut(s)	886, 978
EgeI	GGCGCC	1 cut(s)	565
EheI	GGCGCC	1 cut(s)	565
ErhI	CCWWGG	5 cut(s)	241, 609, 819, 1007, 1919
Esp3I	CGTCTC	1 cut(s)	1603
FalI	AAGNNNNNCTT	2 cut(s)	1311, 1343
FaqI	GGGAC	3 cut(s)	274, 299, 1331
FauI	CCCGC	7 cut(s)	304, 335, 353, 677, 1267, 1662, 2116
FblI	GTMKAC	1 cut(s)	1143
FokI	GGATG	3 cut(s)	161, 1970, 2126
FriOI	GRGCYC	2 cut(s)	886, 978
FspBI	CTAG	6 cut(s)	690, 1118, 1559, 1920, 1971, 1986
GlaI	GCGC	6 cut(s)	235, 282, 455, 565, 982, 1261
GsaI	CCCAGC	5 cut(s)	937, 1055, 1352, 1566, 1956
GsuI	CTGGAG	2 cut(s)	269, 1566
HaeII	RGCGCY	3 cut(s)	457, 567, 1263
HhaI	GCGC	6 cut(s)	236, 283, 456, 566, 983, 1262
Hin1I	GRCGYC	2 cut(s)	414, 564
Hin6I	GCGC	6 cut(s)	234, 281, 454, 564, 981, 1260
HinP1I	GCGC	6 cut(s)	234, 281, 454, 564, 981, 1260
HindIII	AAGCTT	1 cut(s)	1268
HphI	GGTGA	8 cut(s)	89, 194, 1328, 1331, 1744, 2006, 2059, 2258
Hpy166II	GTNNAC	7 cut(s)	115, 168, 847, 1123, 1144, 1552, 1569
Hpy188III	TCNNGA	7 cut(s)	431, 630, 899, 1037, 1514, 1697, 1939
Hpy8I	GTNNAC	7 cut(s)	115, 168, 847, 1123, 1144, 1552, 1569
Hpy99I	CGWCG	6 cut(s)	95, 314, 416, 842, 869, 1076
HpyAV	CCTTC	5 cut(s)	34, 204, 276, 644, 1464
HpyCH4III	ACNGT	6 cut(s)	95, 101, 1021, 1194, 1444, 1979
HpyCH4IV	ACGT	3 cut(s)	104, 414, 1640
HpyCH4V	TGCA	9 cut(s)	962, 1178, 1189, 1421, 1673, 1784, 1892, 2018, 2093
HpyF3I	CTNAG	1 cut(s)	2181
HpySE526I	ACGT	3 cut(s)	104, 414, 1640
Hsp92I	GRCGYC	2 cut(s)	414, 564
HspAI	GCGC	6 cut(s)	234, 281, 454, 564, 981, 1260
KasI	GGCGCC	1 cut(s)	563
Kpn2I	TCCGGA	2 cut(s)	1513, 1696
KroI	GCCGGC	2 cut(s)	521, 680
KroNI	GCCGGC	2 cut(s)	523, 682
LguI	GCTCTTC	1 cut(s)	1314
Lsp1109I	GCAGC	4 cut(s)	1269, 1360, 1685, 1699
LweI	GCATC	3 cut(s)	2080, 2104, 2272
MaeI	CTAG	6 cut(s)	690, 1118, 1559, 1920, 1971, 1986
MaeII	ACGT	3 cut(s)	104, 414, 1640
MaeIII	GTNAC	8 cut(s)	64, 95, 514, 545, 1235, 1732, 2065, 2194
MbiI	CCGCTC	2 cut(s)	183, 1314
MflI	RGATCY	3 cut(s)	632, 1011, 1777
MhlI	GDGCHC	4 cut(s)	886, 978, 1846, 1904
MlsI	TGGCCA	3 cut(s)	746, 1298, 2037
MluCI	AATT	7 cut(s)	1430, 1501, 1629, 1756, 1770, 2002, 2320
MluNI	TGGCCA	3 cut(s)	746, 1298, 2037
Mly113I	GGCGCC	1 cut(s)	564
MlyI	GAGTC	9 cut(s)	464, 626, 852, 896, 1089, 1254, 1504, 2173, 2287
MmeI	TCCRAC	6 cut(s)	114, 423, 645, 847, 1003, 1439
Mox20I	TGGCCA	3 cut(s)	746, 1298, 2037
MreI	CGCCGGCG	2 cut(s)	521, 680
MroI	TCCGGA	2 cut(s)	1513, 1696
MroNI	GCCGGC	2 cut(s)	521, 680
MroXI	GAANNNNTTC	1 cut(s)	1323
MscI	TGGCCA	3 cut(s)	746, 1298, 2037
MseI	TTAA	4 cut(s)	1266, 1719, 1848, 2028
MslI	CAYNNNNRTG	4 cut(s)	1643, 1662, 1897, 2268
Msp20I	TGGCCA	3 cut(s)	746, 1298, 2037
MspA1I	CMGCKG	2 cut(s)	162, 876
Mva1269I	GAATGC	1 cut(s)	1892
MvaI	CCWGG	5 cut(s)	272, 1545, 1992, 2034, 2039
MvnI	CGCG	5 cut(s)	234, 281, 407, 642, 900
NaeI	GCCGGC	2 cut(s)	523, 682
NarI	GGCGCC	1 cut(s)	564
NciI	CCSGG	7 cut(s)	439, 973, 978, 1762, 1822, 1854, 1855
NcoI	CCATGG	3 cut(s)	241, 609, 819
NgoMIV	GCCGGC	2 cut(s)	521, 680
NlaIV	GGNNCC	9 cut(s)	483, 565, 661, 871, 976, 1013, 1497, 1819, 2311
NmeAIII	GCCGAG	3 cut(s)	342, 932, 2172
NmuCI	GTSAC	4 cut(s)	95, 514, 1732, 2065
NruI	TCGCGA	1 cut(s)	900
NspI	RCATGY	3 cut(s)	325, 1661, 1829
NspV	TTCGAA	1 cut(s)	1684
PceI	AGGCCT	1 cut(s)	1691
PciSI	GCTCTTC	1 cut(s)	1314
PcsI	WCGNNNNNNNCGW	6 cut(s)	369, 411, 429, 621, 726, 1068
PctI	GAATGC	1 cut(s)	1892
PdiI	GCCGGC	2 cut(s)	523, 682
PdmI	GAANNNNTTC	1 cut(s)	1323
PfeI	GAWTC	6 cut(s)	590, 626, 759, 800, 1334, 1796
Pfl23II	CGTACG	1 cut(s)	101
PflFI	GACNNNGTC	2 cut(s)	413, 842
PflMI	CCANNNNNTGG	1 cut(s)	2044
PfoI	TCCNGGA	2 cut(s)	1543, 1760
Ple19I	CGATCG	1 cut(s)	898
PleI	GAGTC	9 cut(s)	464, 625, 851, 896, 1088, 1253, 1504, 2173, 2286
PluTI	GGCGCC	1 cut(s)	567
PpsI	GAGTC	9 cut(s)	464, 625, 851, 896, 1088, 1253, 1504, 2173, 2286
PpuMI	RGGWCCY	1 cut(s)	482
PshAI	GACNNNNGTC	1 cut(s)	474
Psp124BI	GAGCTC	1 cut(s)	886
Psp5II	RGGWCCY	1 cut(s)	482
Psp6I	CCWGG	5 cut(s)	270, 1543, 1990, 2032, 2037
PspEI	GGTNACC	1 cut(s)	95
PspFI	CCCAGC	5 cut(s)	933, 1051, 1348, 1562, 1952
PspGI	CCWGG	5 cut(s)	270, 1543, 1990, 2032, 2037
PspLI	CGTACG	1 cut(s)	101
PspN4I	GGNNCC	9 cut(s)	483, 565, 661, 871, 976, 1013, 1497, 1819, 2311
PspOMI	GGGCCC	1 cut(s)	974
PspPPI	RGGWCCY	1 cut(s)	482
PstI	CTGCAG	1 cut(s)	964
PstNI	CAGNNNCTG	1 cut(s)	2288
PsuI	RGATCY	3 cut(s)	632, 1011, 1777
PsyI	GACNNNGTC	2 cut(s)	413, 842
PvuI	CGATCG	1 cut(s)	898
RruI	TCGCGA	1 cut(s)	900
RsaI	GTAC	6 cut(s)	103, 167, 1103, 1169, 1203, 2054
RsaNI	GTAC	6 cut(s)	102, 166, 1102, 1168, 1202, 2053
RseI	CAYNNNNRTG	4 cut(s)	1643, 1662, 1897, 2268
SacI	GAGCTC	1 cut(s)	886
SapI	GCTCTTC	1 cut(s)	1314
SaqAI	TTAA	4 cut(s)	1266, 1719, 1848, 2028
SchI	GAGTC	9 cut(s)	464, 626, 852, 896, 1089, 1254, 1504, 2173, 2287
SduI	GDGCHC	4 cut(s)	886, 978, 1846, 1904
SfaNI	GCATC	3 cut(s)	2080, 2104, 2272
SfcI	CTRYAG	1 cut(s)	960
SfoI	GGCGCC	1 cut(s)	565
SfuI	TTCGAA	1 cut(s)	1684
SgrAI	CRCCGGYG	2 cut(s)	521, 680
SinI	GGWCC	4 cut(s)	482, 823, 1496, 1916
SmaI	CCCGGG	1 cut(s)	1855
SmiMI	CAYNNNNRTG	4 cut(s)	1643, 1662, 1897, 2268
Sse9I	AATT	7 cut(s)	1430, 1501, 1629, 1756, 1770, 2002, 2320
SseBI	AGGCCT	1 cut(s)	1691
SspDI	GGCGCC	1 cut(s)	563
SspI	AATATT	1 cut(s)	128
SspMI	CTAG	6 cut(s)	690, 1118, 1559, 1920, 1971, 1986
SstI	GAGCTC	1 cut(s)	886
StuI	AGGCCT	1 cut(s)	1691
StyI	CCWWGG	5 cut(s)	241, 609, 819, 1007, 1919
TaaI	ACNGT	6 cut(s)	95, 101, 1021, 1194, 1444, 1979
TaiI	ACGT	3 cut(s)	107, 417, 1643
TaqI	TCGA	8 cut(s)	122, 432, 798, 1487, 1684, 1799, 1904, 2243
TasI	AATT	7 cut(s)	1430, 1501, 1629, 1756, 1770, 2002, 2320
TatI	WGTACW	3 cut(s)	1101, 1201, 2052
TauI	GCSGC	6 cut(s)	162, 767, 818, 879, 932, 1161
TfiI	GAWTC	6 cut(s)	590, 626, 759, 800, 1334, 1796
Tru1I	TTAA	4 cut(s)	1266, 1719, 1848, 2028
Tru9I	TTAA	4 cut(s)	1266, 1719, 1848, 2028
TscAI	CASTG	4 cut(s)	1309, 2025, 2143, 2170
TseFI	GTSAC	4 cut(s)	95, 514, 1732, 2065
TseI	GCWGC	4 cut(s)	1257, 1373, 1673, 1712
Tsp45I	GTSAC	4 cut(s)	95, 514, 1732, 2065
TspDTI	ATGAA	6 cut(s)	6, 16, 50, 97, 1802, 1885
TspGWI	ACGGA	4 cut(s)	298, 853, 855, 1998
TspMI	CCCGGG	1 cut(s)	1853
TspRI	CASTG	4 cut(s)	1309, 2025, 2143, 2170
Tth111I	GACNNNGTC	2 cut(s)	413, 842
Van91I	CCANNNNNTGG	1 cut(s)	2044
VpaK11BI	GGWCC	4 cut(s)	482, 823, 1496, 1916
XapI	RAATTY	3 cut(s)	1430, 1501, 2320
XceI	RCATGY	3 cut(s)	325, 1661, 1829
XmaI	CCCGGG	1 cut(s)	1853
XmaJI	CCTAGG	1 cut(s)	1919
XmiI	GTMKAC	1 cut(s)	1143
XmnI	GAANNNNTTC	1 cut(s)	1323
XspI	CTAG	6 cut(s)	690, 1118, 1559, 1920, 1971, 1986
ZraI	GACGTC	1 cut(s)	415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.