Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013037

Physical Location & Seq

Genomic Coordinates Forward (+)

22162710 .. 22164716

Gene Structure 2007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00100300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGCCCCGCCAGCTCCACACCACCCGCACCTACAACTTCCTCGGCCTCGCCGACAACTTCGGCCTCTGGCCCAACTCCGACTACGCGGATGACGTCATCATCGGAGTTCTCGACACCGGGATTTGGCCCGAGCGCCCGAGCTTCTCTGACTCGGCTCTGGGTCCCGTCCCGGAGACGTGGAAAGGCAAATGCGTGACCGCCGGCGACTTTCCGGCCTCCGCTTGTAACCGGAAGATCATCGGCGCCAGAGCTTATTTCAACGGCTACGAATCCTACCTCGGAAAACCCATGGACGAGTCCAACGAATCCAGATCCCCACGCGACACAGAAGGCCACGGCACCCACACAGCCTCCACCGCCGGCGGGTCCAGGGTTTCTAACGCCAGCTTCTACGAATACGCCTACGGCGAAGCCAGAGGTATGGCCAGCAAAGCCAGAATCGCAGCCTATAAAATCTGCTGGACTTTTGGTTGTTTCGATTCGGATATTCTCGCCGCCATGGACCAAGCAATCGCCGACGGAGTCCACATCATCTCCCTCTCCGTCGGAGCCAGCGGCGGCGCTCCGCCTTACGATCGCGACTCCATCGCGATCGGAGCATTCGGTGCGGCCCAGCACGGCGTTCTGGTCTCGGCCTCTGCAGGAAACTCCGGGCCCGGCGCGTTTACCGCCACCAACATCGCTCCTTGGATTCTTACAGTCGGAGCTTCCACTCTTGACAGAGAGTTCCCAGCCGATGTCGTTCTGGGCGACGGCAGAGTCTTCAACGGCGTGTCGTTGTACTCCGGCGAGGGTCTAGTGGACTTCAAGCTCCCGTTAGTCTACGGCGGAGACTGCGGCAGTAGGTACTGCTTTGCAGGGTCTCTGCAACCGTCAAAAGTGCAAGGCAAGATCGTTGTTTGTGATCGTGGAGGTAACGCCAGAGTCGCCAAAGGAAGCGCCGTTAAGCTTGCAGGTGGGATCGGAATGATAATGGCAAATACGGAAGAGAGCGGTGAAGAGCTTCTTGCTGATTCTCACCTCGTCCCAGCAACCATGGTGGGTCAAATCGCTGCCGATCAGATAAGGAACTACATCAGATTGGGGGAATATCCAACTGCAACGATCAAATTCCGAGGAACTGTAATTGGGCCTTCTCCACCATCGCCTAAAGTAGCTTCGTTTTCGAGCAGGGGTCCAAATTCTCTGACTCCGGAGATATTGAAACCCGATGTGATTGCTCCTGGAGTGAACATTCTAGCTGGGTGGACTGGTGCTTCTTCCCCTACTGATTTGGACATTGATTCGAGACGAGTTGAGTTCAATATAATTTCTGGCACATCCATGTCCTGCCCGCATGTTAGTGGCATTGCAGCTCTGCTTCGAAAGGCCTATCCGGAATGGTCTCCTGCTGCTATTAAATCCGCATTGGTGACAACAGCTTATACTTTGGACAATTCCGGGAAGAAGATTGAGGATCTTGCAAATGGGAGAGAATCGACGCCTTTTGTTCATGGAGCCGGGCATGTTGATCCCAACAGGGCACTTAATCCCGGGTTAGTGTATGATATCAATGTGAATGACTATGTTGCATTCATGTGCTCGATTGGTTATGGTCCTAGGCAGATAGCTGTTTTCGTGAGAGAGTTAGCTGGGGATGATATATGTGCCAGAAACAGTTTAGCTAGTCCTGGTGATTTGAATTATCCGTCATTTGCAGTGGTGTTTAAGCCTGGCCAGGAGTTGGTGAAGTACAAGAGAGTTGTGACGAATGTTGGGAGTGTTGCTGATGCAGTTTATGAGGTAAATGTGGATGCTCCGGCGGGTGTTGAAATCAGTGTTGAGCCGAGTAAGCTGGTTTTCAGTGAAGAAAATCAGACTCAGAGTTATGAGGTTACATTTGCGAAAGGTGCTGGGTACGGAAATGGGGAGAGATATGGGTCAATTGAGTGGAGCAATGGGCATCACCATGTGAGGAGTCCAGTTGCTGTTAGGTGGAGCAATACTGGGTATTCAGCCTCCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006508 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009653 GO:0010016 GO:0010150 GO:0010223 GO:0010346 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0070011 GO:0071704 GO:0071944 GO:0090693 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

668

Amino Acids

70.6

Weight (kDa)

5.55

Isoelectric Point (pI)

33.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	30 - 485	5.2e-50	Subtilase family
PA	PF02225	271 - 355	2.9e-13	PA domain
fn3_6	PF17766	559 - 657	9.2e-29	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14067
fragaria_vesca	FvH4_6g35010
malus_domestica	MD09G1180500.v1.1 MD17G1166500.v1.1
prunus_persica	Prupe.3G039000_v2.0.a1
pyrus_communis	pycom09g09790
rosa_chinensis	RchiOBHm_Chr2g0146061
rosa_laevigata	RLG00000020182
rosa_multiflora	Rmu_sc0010454.1_g000002 Rmu_sc0014682.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434860 Rroxscaffold_2G00100300
rosa_rugosa	Rorug02G0393600
rosa_samantha	Rh2AG449000 Rh2BG461400 Rh2CG436000 Rh2DG470600
rosa_wichuraiana	Rw2G036670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	944
AasI	GACNNNNNNGTC	1 cut(s)	758
AatII	GACGTC	1 cut(s)	96
Acc36I	ACCTGC	1 cut(s)	944
AccB1I	GGYRCC	2 cut(s)	242, 338
AccB7I	CCANNNNNTGG	1 cut(s)	1723
AccBSI	CCGCTC	1 cut(s)	993
AccI	GTMKAC	1 cut(s)	822
AccII	CGCG	5 cut(s)	86, 321, 579, 590, 662
AccIII	TCCGGA	2 cut(s)	1192, 1375
AclWI	GGATC	4 cut(s)	306, 968, 1464, 1505
AcoI	YGGCCR	2 cut(s)	423, 1714
AcsI	RAATTY	2 cut(s)	1109, 1180
AcyI	GRCGYC	3 cut(s)	93, 243, 1481
AdeI	CACNNNGTG	1 cut(s)	1951
AfaI	GTAC	4 cut(s)	782, 848, 1733, 1898
AfiI	CCNNNNNNNGG	3 cut(s)	123, 363, 1723
AgsI	TTSAA	7 cut(s)	259, 766, 808, 1204, 1303, 1681, 1811
AjiI	CACGTC	1 cut(s)	177
AjnI	CCWGG	5 cut(s)	368, 1222, 1669, 1711, 1716
Alw21I	GWGCWC	1 cut(s)	1583
Alw26I	GTCTC	6 cut(s)	167, 634, 825, 867, 1282, 1389
AlwI	GGATC	4 cut(s)	306, 968, 1464, 1505
AlwNI	CAGNNNCTG	1 cut(s)	1967
Ama87I	CYCGRG	3 cut(s)	128, 136, 1532
Aor13HI	TCCGGA	2 cut(s)	1192, 1375
ApaI	GGGCCC	1 cut(s)	657
ApeKI	GCWGC	4 cut(s)	443, 1052, 1352, 1391
ApoI	RAATTY	2 cut(s)	1109, 1180
Asp700I	GAANNNNTTC	1 cut(s)	1002
AspA2I	CCTAGG	1 cut(s)	1598
AspLEI	GCGC	5 cut(s)	135, 245, 563, 662, 941
AsuC2I	CCSGG	8 cut(s)	118, 170, 652, 657, 1441, 1501, 1533, 1534
AsuHPI	GGTGA	6 cut(s)	1007, 1010, 1423, 1685, 1738, 1937
AsuII	TTCGAA	1 cut(s)	1363
AvaI	CYCGRG	3 cut(s)	128, 136, 1532
AvaII	GGWCC	5 cut(s)	161, 366, 502, 1175, 1595
AvrII	CCTAGG	1 cut(s)	1598
BaeGI	GKGCMC	2 cut(s)	657, 1525
BalI	TGGCCA	2 cut(s)	425, 1716
BanI	GGYRCC	2 cut(s)	242, 338
BanII	GRGCYC	1 cut(s)	657
BbsI	GAAGAC	1 cut(s)	754
Bbv12I	GWGCWC	1 cut(s)	1583
BbvI	GCAGC	4 cut(s)	455, 1039, 1364, 1378
BccI	CCATC	2 cut(s)	593, 1150
BceAI	ACGGC	8 cut(s)	277, 352, 421, 634, 769, 784, 841, 926
BcgI	CGANNNNNNTGC	2 cut(s)	1199, 1233
BciT130I	CCWGG	5 cut(s)	370, 1224, 1671, 1713, 1718
BcnI	CCSGG	8 cut(s)	118, 170, 652, 657, 1441, 1501, 1533, 1534
BcoDI	GTCTC	6 cut(s)	167, 634, 825, 867, 1282, 1389
BfaI	CTAG	4 cut(s)	797, 1238, 1599, 1665
BfmI	CTRYAG	1 cut(s)	639
BfoI	RGCGCY	4 cut(s)	136, 246, 564, 942
BfuAI	ACCTGC	1 cut(s)	944
BisI	GCNGC	9 cut(s)	444, 495, 556, 559, 609, 838, 1053, 1353, 1392
BlnI	CCTAGG	1 cut(s)	1598
BlsI	GCNGC	9 cut(s)	445, 496, 557, 560, 610, 839, 1054, 1354, 1393
Bme18I	GGWCC	5 cut(s)	161, 366, 502, 1175, 1595
BmeT110I	CYCGRG	3 cut(s)	128, 136, 1532
BmgBI	CACGTC	1 cut(s)	177
BmiI	GGNNCC	9 cut(s)	162, 163, 244, 340, 367, 550, 655, 1176, 1498
BmrI	ACTGGG	1 cut(s)	1995
BmsI	GCATC	3 cut(s)	1759, 1783, 1951
BmuI	ACTGGG	1 cut(s)	1995
BpiI	GAAGAC	1 cut(s)	754
BpmI	CTGGAG	1 cut(s)	1245
Bpu14I	TTCGAA	1 cut(s)	1363
BpuMI	CCSGG	8 cut(s)	118, 170, 652, 657, 1441, 1501, 1533, 1534
BsaHI	GRCGYC	3 cut(s)	93, 243, 1481
BsaI	GGTCTC	3 cut(s)	634, 867, 1389
BsaWI	WCCGGW	3 cut(s)	228, 1192, 1375
BsaXI	ACNNNNNCTCC	4 cut(s)	335, 365, 518, 548
Bsc4I	CCNNNNNNNGG	3 cut(s)	123, 363, 1723
Bse118I	RCCGGY	2 cut(s)	200, 359
Bse1I	ACTGG	3 cut(s)	1255, 1961, 1990
Bse3DI	GCAATG	2 cut(s)	1347, 1942
BseAI	TCCGGA	2 cut(s)	1192, 1375
BseBI	CCWGG	5 cut(s)	370, 1224, 1671, 1713, 1718
BseGI	GGATG	4 cut(s)	94, 1319, 1642, 1798
BseLI	CCNNNNNNNGG	3 cut(s)	123, 363, 1723
BseMI	GCAATG	2 cut(s)	1347, 1942
BseMII	CTCAG	1 cut(s)	1874
BseNI	ACTGG	3 cut(s)	1255, 1961, 1990
BseRI	GAGGAG	1 cut(s)	1969
BseSI	GKGCMC	2 cut(s)	657, 1525
BseXI	GCAGC	4 cut(s)	455, 1039, 1364, 1378
BseYI	CCCAGC	6 cut(s)	612, 730, 1027, 1241, 1631, 1892
Bsh1236I	CGCG	5 cut(s)	86, 321, 579, 590, 662
Bsh1285I	CGRYCG	2 cut(s)	577, 594
BshNI	GGYRCC	2 cut(s)	242, 338
BsiEI	CGRYCG	2 cut(s)	577, 594
BsiHKAI	GWGCWC	1 cut(s)	1583
BsiHKCI	CYCGRG	3 cut(s)	128, 136, 1532
BslFI	GGGAC	3 cut(s)	147, 152, 1010
BslI	CCNNNNNNNGG	3 cut(s)	123, 363, 1723
BsmAI	GTCTC	6 cut(s)	167, 634, 825, 867, 1282, 1389
BsmBI	CGTCTC	2 cut(s)	167, 1282
BsmFI	GGGAC	3 cut(s)	147, 152, 1010
BsmI	GAATGC	2 cut(s)	599, 1571
Bso31I	GGTCTC	3 cut(s)	634, 867, 1389
BsoBI	CYCGRG	3 cut(s)	128, 136, 1532
Bsp119I	TTCGAA	1 cut(s)	1363
Bsp120I	GGGCCC	1 cut(s)	653
Bsp1286I	GDGCHC	3 cut(s)	657, 1525, 1583
Bsp13I	TCCGGA	2 cut(s)	1192, 1375
Bsp19I	CCATGG	3 cut(s)	288, 498, 1035
Bsp68I	TCGCGA	2 cut(s)	579, 590
BspCNI	CTCAG	1 cut(s)	1873
BspEI	TCCGGA	2 cut(s)	1192, 1375
BspFNI	CGCG	5 cut(s)	86, 321, 579, 590, 662
BspLI	GGNNCC	9 cut(s)	162, 163, 244, 340, 367, 550, 655, 1176, 1498
BspMAI	CTGCAG	1 cut(s)	643
BspMI	ACCTGC	1 cut(s)	944
BspPI	GGATC	4 cut(s)	306, 968, 1464, 1505
BspQI	GCTCTTC	1 cut(s)	993
BspT104I	TTCGAA	1 cut(s)	1363
BspT107I	GGYRCC	2 cut(s)	242, 338
BspTNI	GGTCTC	3 cut(s)	634, 867, 1389
BsrBI	CCGCTC	1 cut(s)	993
BsrDI	GCAATG	2 cut(s)	1347, 1942
BsrFI	RCCGGY	2 cut(s)	200, 359
BsrI	ACTGG	3 cut(s)	1255, 1961, 1990
BssAI	RCCGGY	2 cut(s)	200, 359
BssNI	GRCGYC	3 cut(s)	93, 243, 1481
BssT1I	CCWWGG	5 cut(s)	288, 498, 686, 1035, 1598
Bst2UI	CCWGG	5 cut(s)	370, 1224, 1671, 1713, 1718
Bst4CI	ACNGT	4 cut(s)	700, 873, 1123, 1658
Bst6I	CTCTTC	2 cut(s)	981, 993
BstACI	GRCGYC	3 cut(s)	93, 243, 1481
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstBI	TTCGAA	1 cut(s)	1363
BstC8I	GCNNGC	8 cut(s)	11, 202, 361, 385, 427, 553, 951, 1334
BstDEI	CTNAG	1 cut(s)	1860
BstDSI	CCRYGG	4 cut(s)	288, 334, 498, 1035
BstF5I	GGATG	4 cut(s)	94, 1319, 1642, 1798
BstFNI	CGCG	5 cut(s)	86, 321, 579, 590, 662
BstH2I	RGCGCY	4 cut(s)	136, 246, 564, 942
BstHHI	GCGC	5 cut(s)	135, 245, 563, 662, 941
BstMAI	GTCTC	6 cut(s)	167, 634, 825, 867, 1282, 1389
BstMCI	CGRYCG	2 cut(s)	577, 594
BstNI	CCWGG	5 cut(s)	370, 1224, 1671, 1713, 1718
BstNSI	RCATGY	2 cut(s)	1340, 1508
BstSFI	CTRYAG	1 cut(s)	639
BstSLI	GKGCMC	2 cut(s)	657, 1525
BstUI	CGCG	5 cut(s)	86, 321, 579, 590, 662
BstV1I	GCAGC	4 cut(s)	455, 1039, 1364, 1378
BstV2I	GAAGAC	1 cut(s)	754
BstX2I	RGATCY	2 cut(s)	311, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	421
BstYI	RGATCY	2 cut(s)	311, 1456
BtgI	CCRYGG	4 cut(s)	288, 334, 498, 1035
BtgZI	GCGATG	3 cut(s)	571, 664, 1128
BtrI	CACGTC	1 cut(s)	177
BtsCI	GGATG	4 cut(s)	94, 1319, 1642, 1798
BtsI	GCAGTG	1 cut(s)	1704
BtsIMutI	CAGTG	3 cut(s)	1704, 1822, 1849
BtuMI	TCGCGA	2 cut(s)	579, 590
BveI	ACCTGC	1 cut(s)	944
Cac8I	GCNNGC	8 cut(s)	11, 202, 361, 385, 427, 553, 951, 1334
CaiI	CAGNNNCTG	1 cut(s)	1967
CfoI	GCGC	5 cut(s)	135, 245, 563, 662, 941
Cfr10I	RCCGGY	2 cut(s)	200, 359
Cfr9I	CCCGGG	1 cut(s)	1532
CseI	GACGC	1 cut(s)	1489
Csp6I	GTAC	4 cut(s)	781, 847, 1732, 1897
CspCI	CAANNNNNGTGG	2 cut(s)	1020, 1055
CviAII	CATG	9 cut(s)	289, 499, 1036, 1324, 1337, 1493, 1505, 1576, 1949
CviQI	GTAC	4 cut(s)	781, 847, 1732, 1897
DdeI	CTNAG	1 cut(s)	1860
DinI	GGCGCC	1 cut(s)	244
DraIII	CACNNNGTG	1 cut(s)	1951
DrdI	GACNNNNNNGTC	1 cut(s)	758
DseDI	GACNNNNNNGTC	1 cut(s)	758
EaeI	YGGCCR	2 cut(s)	423, 1714
Eam1104I	CTCTTC	2 cut(s)	981, 993
EarI	CTCTTC	2 cut(s)	981, 993
EciI	GGCGGA	2 cut(s)	555, 843
Eco130I	CCWWGG	5 cut(s)	288, 498, 686, 1035, 1598
Eco147I	AGGCCT	1 cut(s)	1370
Eco24I	GRGCYC	1 cut(s)	657
Eco31I	GGTCTC	3 cut(s)	634, 867, 1389
Eco32I	GATATC	1 cut(s)	1549
Eco47I	GGWCC	5 cut(s)	161, 366, 502, 1175, 1595
Eco88I	CYCGRG	3 cut(s)	128, 136, 1532
EcoO109I	RGGNCCY	1 cut(s)	161
EcoRII	CCWGG	5 cut(s)	368, 1222, 1669, 1711, 1716
EcoRV	GATATC	1 cut(s)	1549
EcoT14I	CCWWGG	5 cut(s)	288, 498, 686, 1035, 1598
EcoT38I	GRGCYC	1 cut(s)	657
EgeI	GGCGCC	1 cut(s)	244
EheI	GGCGCC	1 cut(s)	244
ErhI	CCWWGG	5 cut(s)	288, 498, 686, 1035, 1598
Esp3I	CGTCTC	2 cut(s)	167, 1282
FaeI	CATG	9 cut(s)	292, 502, 1039, 1327, 1340, 1496, 1508, 1579, 1952
FalI	AAGNNNNNCTT	2 cut(s)	990, 1022
FaqI	GGGAC	3 cut(s)	147, 152, 1010
FatI	CATG	9 cut(s)	288, 498, 1035, 1323, 1336, 1492, 1504, 1575, 1948
FauI	CCCGC	5 cut(s)	14, 32, 356, 1341, 1795
FauNDI	CATATG	1 cut(s)	2003
FblI	GTMKAC	1 cut(s)	822
Fnu4HI	GCNGC	9 cut(s)	444, 495, 556, 559, 609, 838, 1053, 1353, 1392
FokI	GGATG	4 cut(s)	101, 1306, 1649, 1805
FriOI	GRGCYC	1 cut(s)	657
Fsp4HI	GCNGC	9 cut(s)	444, 495, 556, 559, 609, 838, 1053, 1353, 1392
FspBI	CTAG	4 cut(s)	797, 1238, 1599, 1665
GlaI	GCGC	5 cut(s)	134, 244, 562, 661, 940
GluI	GCNGC	9 cut(s)	444, 495, 556, 559, 609, 838, 1053, 1353, 1392
GsaI	CCCAGC	6 cut(s)	616, 734, 1031, 1245, 1635, 1896
GsuI	CTGGAG	1 cut(s)	1245
HaeII	RGCGCY	4 cut(s)	136, 246, 564, 942
HgaI	GACGC	1 cut(s)	1489
HhaI	GCGC	5 cut(s)	135, 245, 563, 662, 941
Hin1I	GRCGYC	3 cut(s)	93, 243, 1481
Hin1II	CATG	9 cut(s)	292, 502, 1039, 1327, 1340, 1496, 1508, 1579, 1952
Hin6I	GCGC	5 cut(s)	133, 243, 561, 660, 939
HinP1I	GCGC	5 cut(s)	133, 243, 561, 660, 939
HindIII	AAGCTT	1 cut(s)	947
HphI	GGTGA	6 cut(s)	1007, 1010, 1423, 1685, 1738, 1937
Hpy166II	GTNNAC	6 cut(s)	526, 666, 802, 823, 1231, 1248
Hpy188III	TCNNGA	9 cut(s)	110, 309, 578, 589, 716, 1193, 1287, 1376, 1618
Hpy8I	GTNNAC	6 cut(s)	526, 666, 802, 823, 1231, 1248
Hpy99I	CGWCG	4 cut(s)	521, 548, 755, 1483
HpyAV	CCTTC	2 cut(s)	323, 1143
HpyCH4III	ACNGT	4 cut(s)	700, 873, 1123, 1658
HpyCH4IV	ACGT	2 cut(s)	93, 176
HpyF3I	CTNAG	1 cut(s)	1860
HpySE526I	ACGT	2 cut(s)	93, 176
Hsp92I	GRCGYC	3 cut(s)	93, 243, 1481
Hsp92II	CATG	9 cut(s)	292, 502, 1039, 1327, 1340, 1496, 1508, 1579, 1952
HspAI	GCGC	5 cut(s)	133, 243, 561, 660, 939
KasI	GGCGCC	1 cut(s)	242
KflI	GGGWCCC	1 cut(s)	161
Kpn2I	TCCGGA	2 cut(s)	1192, 1375
KroI	GCCGGC	2 cut(s)	200, 359
KroNI	GCCGGC	2 cut(s)	202, 361
LguI	GCTCTTC	1 cut(s)	993
Lsp1109I	GCAGC	4 cut(s)	455, 1039, 1364, 1378
LweI	GCATC	3 cut(s)	1759, 1783, 1951
MaeI	CTAG	4 cut(s)	797, 1238, 1599, 1665
MaeII	ACGT	2 cut(s)	93, 176
MaeIII	GTNAC	6 cut(s)	193, 224, 914, 1411, 1744, 1873
MbiI	CCGCTC	1 cut(s)	993
MboII	GAAGA	8 cut(s)	244, 754, 998, 1010, 1251, 1456, 1459, 1859
MfeI	CAATTG	1 cut(s)	1923
MflI	RGATCY	2 cut(s)	311, 1456
MhlI	GDGCHC	3 cut(s)	657, 1525, 1583
MlsI	TGGCCA	2 cut(s)	425, 1716
MluCI	AATT	7 cut(s)	1109, 1125, 1180, 1308, 1435, 1681, 1923
MluNI	TGGCCA	2 cut(s)	425, 1716
Mly113I	GGCGCC	1 cut(s)	243
MlyI	GAGTC	9 cut(s)	143, 305, 531, 575, 768, 933, 1183, 1852, 1966
MmeI	TCCRAC	5 cut(s)	102, 324, 526, 682, 1118
Mox20I	TGGCCA	2 cut(s)	425, 1716
MreI	CGCCGGCG	2 cut(s)	200, 359
MroI	TCCGGA	2 cut(s)	1192, 1375
MroNI	GCCGGC	2 cut(s)	200, 359
MroXI	GAANNNNTTC	1 cut(s)	1002
MscI	TGGCCA	2 cut(s)	425, 1716
MseI	TTAA	4 cut(s)	945, 1398, 1527, 1707
MslI	CAYNNNNRTG	4 cut(s)	1322, 1341, 1576, 1947
Msp20I	TGGCCA	2 cut(s)	425, 1716
MspA1I	CMGCKG	1 cut(s)	555
MunI	CAATTG	1 cut(s)	1923
Mva1269I	GAATGC	2 cut(s)	599, 1571
MvaI	CCWGG	5 cut(s)	370, 1224, 1671, 1713, 1718
MvnI	CGCG	5 cut(s)	86, 321, 579, 590, 662
NaeI	GCCGGC	2 cut(s)	202, 361
NarI	GGCGCC	1 cut(s)	243
NciI	CCSGG	8 cut(s)	118, 170, 652, 657, 1441, 1501, 1533, 1534
NcoI	CCATGG	3 cut(s)	288, 498, 1035
NdeI	CATATG	1 cut(s)	2003
NgoMIV	GCCGGC	2 cut(s)	200, 359
NlaIII	CATG	9 cut(s)	292, 502, 1039, 1327, 1340, 1496, 1508, 1579, 1952
NlaIV	GGNNCC	9 cut(s)	162, 163, 244, 340, 367, 550, 655, 1176, 1498
NmeAIII	GCCGAG	4 cut(s)	21, 131, 611, 1851
NmuCI	GTSAC	3 cut(s)	193, 1411, 1744
NruI	TCGCGA	2 cut(s)	579, 590
NspI	RCATGY	2 cut(s)	1340, 1508
NspV	TTCGAA	1 cut(s)	1363
PaqCI	CACCTGC	1 cut(s)	944
PceI	AGGCCT	1 cut(s)	1370
PciSI	GCTCTTC	1 cut(s)	993
PcsI	WCGNNNNNNNCGW	6 cut(s)	48, 90, 108, 300, 405, 747
PctI	GAATGC	2 cut(s)	599, 1571
PdiI	GCCGGC	2 cut(s)	202, 361
PdmI	GAANNNNTTC	1 cut(s)	1002
PfeI	GAWTC	8 cut(s)	269, 305, 438, 479, 691, 1013, 1283, 1475
PflFI	GACNNNGTC	1 cut(s)	521
PflMI	CCANNNNNTGG	1 cut(s)	1723
PfoI	TCCNGGA	3 cut(s)	168, 1222, 1439
PkrI	GCNGC	9 cut(s)	445, 496, 557, 560, 610, 839, 1054, 1354, 1393
Ple19I	CGATCG	2 cut(s)	577, 594
PleI	GAGTC	9 cut(s)	143, 304, 530, 575, 767, 932, 1183, 1852, 1965
PluTI	GGCGCC	1 cut(s)	246
PpsI	GAGTC	9 cut(s)	143, 304, 530, 575, 767, 932, 1183, 1852, 1965
PpuMI	RGGWCCY	1 cut(s)	161
Psp5II	RGGWCCY	1 cut(s)	161
Psp6I	CCWGG	5 cut(s)	368, 1222, 1669, 1711, 1716
PspFI	CCCAGC	6 cut(s)	612, 730, 1027, 1241, 1631, 1892
PspGI	CCWGG	5 cut(s)	368, 1222, 1669, 1711, 1716
PspN4I	GGNNCC	9 cut(s)	162, 163, 244, 340, 367, 550, 655, 1176, 1498
PspOMI	GGGCCC	1 cut(s)	653
PspPPI	RGGWCCY	1 cut(s)	161
PstI	CTGCAG	1 cut(s)	643
PstNI	CAGNNNCTG	1 cut(s)	1967
PsuI	RGATCY	2 cut(s)	311, 1456
PsyI	GACNNNGTC	1 cut(s)	521
PvuI	CGATCG	2 cut(s)	577, 594
RruI	TCGCGA	2 cut(s)	579, 590
RsaI	GTAC	4 cut(s)	782, 848, 1733, 1898
RsaNI	GTAC	4 cut(s)	781, 847, 1732, 1897
RseI	CAYNNNNRTG	4 cut(s)	1322, 1341, 1576, 1947
SapI	GCTCTTC	1 cut(s)	993
SaqAI	TTAA	4 cut(s)	945, 1398, 1527, 1707
SatI	GCNGC	9 cut(s)	444, 495, 556, 559, 609, 838, 1053, 1353, 1392
SchI	GAGTC	9 cut(s)	143, 305, 531, 575, 768, 933, 1183, 1852, 1966
SduI	GDGCHC	3 cut(s)	657, 1525, 1583
SfaNI	GCATC	3 cut(s)	1759, 1783, 1951
SfcI	CTRYAG	1 cut(s)	639
SfoI	GGCGCC	1 cut(s)	244
SfuI	TTCGAA	1 cut(s)	1363
SgrAI	CRCCGGYG	2 cut(s)	200, 359
SinI	GGWCC	5 cut(s)	161, 366, 502, 1175, 1595
SmaI	CCCGGG	1 cut(s)	1534
SmiMI	CAYNNNNRTG	4 cut(s)	1322, 1341, 1576, 1947
Sse9I	AATT	7 cut(s)	1109, 1125, 1180, 1308, 1435, 1681, 1923
SseBI	AGGCCT	1 cut(s)	1370
SspDI	GGCGCC	1 cut(s)	242
SspMI	CTAG	4 cut(s)	797, 1238, 1599, 1665
StuI	AGGCCT	1 cut(s)	1370
StyI	CCWWGG	5 cut(s)	288, 498, 686, 1035, 1598
TaaI	ACNGT	4 cut(s)	700, 873, 1123, 1658
TaiI	ACGT	2 cut(s)	96, 179
TaqI	TCGA	7 cut(s)	111, 477, 1166, 1286, 1363, 1478, 1583
TasI	AATT	7 cut(s)	1109, 1125, 1180, 1308, 1435, 1681, 1923
TatI	WGTACW	2 cut(s)	780, 1731
TauI	GCSGC	5 cut(s)	497, 558, 561, 611, 840
TfiI	GAWTC	8 cut(s)	269, 305, 438, 479, 691, 1013, 1283, 1475
Tru1I	TTAA	4 cut(s)	945, 1398, 1527, 1707
Tru9I	TTAA	4 cut(s)	945, 1398, 1527, 1707
TscAI	CASTG	3 cut(s)	1704, 1822, 1849
TseFI	GTSAC	3 cut(s)	193, 1411, 1744
TseI	GCWGC	4 cut(s)	443, 1052, 1352, 1391
Tsp45I	GTSAC	3 cut(s)	193, 1411, 1744
TspDTI	ATGAA	2 cut(s)	1481, 1564
TspGWI	ACGGA	5 cut(s)	532, 534, 998, 1677, 1914
TspMI	CCCGGG	1 cut(s)	1532
TspRI	CASTG	3 cut(s)	1704, 1822, 1849
Tth111I	GACNNNGTC	1 cut(s)	521
Van91I	CCANNNNNTGG	1 cut(s)	1723
VpaK11BI	GGWCC	5 cut(s)	161, 366, 502, 1175, 1595
XapI	RAATTY	2 cut(s)	1109, 1180
XceI	RCATGY	2 cut(s)	1340, 1508
XmaI	CCCGGG	1 cut(s)	1532
XmaJI	CCTAGG	1 cut(s)	1598
XmiI	GTMKAC	1 cut(s)	822
XmnI	GAANNNNTTC	1 cut(s)	1002
XspI	CTAG	4 cut(s)	797, 1238, 1599, 1665
ZraI	GACGTC	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.