Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000152

Orthogroup ID

OG0013037

Physical Location & Seq

Genomic Coordinates Reverse (-)

398957 .. 401287

Gene Structure 2331 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_152G00434860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCTGTTTCATCTTCATCTTCATCTTCCTTCATCTTCTTCTTCCTTGTCCTCTGTCTGGTTCATGTAACTTCTTTCTCAACTGACCAATCCGACGGTCACCGGACGTTCATCGTCCACGTGTCGAAATATTCCAAGCCTGCTCTTTTCTCCTCCCACCGCCGCTGGTACACCTCCATCCTCCGCTCCCTCCCTCCTTCCCCTCACCCCACCAAGCTCCTCTACACCTACTCACGCGCCGTCCATGGCTTCTCCGCCACGCTCTCCCCCTCCCAGGCCCACGCGCTCCAGTCCCACCCCGCCGTCCTCTCCGTCGTCCCCGACATGCCCCGCCAGCTCCACACCACCCGCACCTACAACTTCCTCGGCCTCGCCGACAACTTCGGCCTCTGGCCCAACTCCGACTACGCGGATGACGTCATCATCGGAGTTCTCGACACCGGGATTTGGCCCGAGCGCCCGAGCTTCTCTGACTCGGGTCTGGGTCCCGTCCCGGAGACGTGGAAAGGCAAATGCGTGACCGCCGGCGACTTTCCGGCCTCCGCTTGTAACCGGAAGATCATCGGCGCCAGAGCTTATTTCAACGGCTACGAATCCTACCTCGGAAAACCCATGGACGAGTCCAACGAATCCAGATCCCCACGCGACACAGAAGGCCACGGCACCCACACAGCCTCCACCGCCGGCGGGTCCAGGGTTTCTAACGCCAGCTTCTACGAATACGCCTACGGCGAAGCCAGAGGTATGGCCAGCAAAGCCAGAATCGCAGCCTATAAAATCTGCTGGACTTTTGGTTGTTTCGATTCGGATATTCTCGCCGCCATGGACCAAGCAATCGCCGACGGAGTCCACATCATCTCCCTCTCCGTCGGAGCCAGCGGCGGCGCTCCGCCTTACGATCGCGACTCCATCGCGATCGGAGCATTCGGTGCGGCCCAGCACGGCGTTCTGGTCTCGGCCTCTGCAGGAAACTCCGGGCCCGGCGCGTTTACCGCCACCAACATCGCTCCTTGGATTCTTACAGTCGGAGCTTCCACTCTTGACAGAGAGTTCCCAGCCGATGTCGTTCTGGGCGACGGCAGAGTCTTCAACGGCGTGTCGTTGTACTCCGGCGAGGGTCTAGTGGACTTCAAGCTCCCGTTAGTCTACGGCGGAGACTGCGGCAGTAGGTACTGCTTTGCAGGGTCTCTGCAACCGTCAAAAGTGCAAGGCAAGATCGTTGTTTGTGATCGTGGAGGTAACGCCAGAGTCGCCAAAGGAAGCGCCGTTAAGCTTGCAGGTGGGATCGGAATGATAATGGCAAATACGGAAGAGAGCGGTGAAGAGCTTCTTGCTGATTCTCACCTCGTCCCAGCAACCATGGTGGGTCAAATCGCTGCCGATCAGATAAGGAACTACATCAGATTGGGGGAATATCCAACTGCAACGATCAAATTCCGAGGAACTGTAATTGGGCCTTCTCCACCATCGCCTAAAGTAGCTTCGTTTTCGAGCAGGGGTCCAAATTCTCTGACTCCGGAGATATTGAAACCCGATGTGATTGCTCCTGGAGTGAACATTCTAGCTGGGTGGACTGGTGCTTCTTCCCCTACTGATTTGGACATTGATTCGAGACGAGTTGAGTTCAATATAATTTCTGGCACATCCATGTCCTGCCCGCATGTTAGTGGCATTGCAGCTCTGCTTCGAAAGGCCTATCCGGAATGGTCTCCTGCTGCTATTAAATCCGCATTGGTGACAACAGCTTATACTTTGGACAATTCCGGGAAGAAGATTGAGGATCTTGCAAATGGGAGAGAATCGACGCCTTTTGTTCATGGAGCCGGGCATGTTGATCCCAACAGGGCACTTAATCCCGGGTTAGTGTATGATATCAATGTGAATGACTATGTTGCATTCATGTGCTCGATTGGTTATGGTCCTAGGCAGATAGCTGTTTTCGTGAGAGAGTTAGCTGGGGATGATATATGTGCCAGAAACAGTTTAGCTAGTCCTGGTGATTTGAATTATCCGTCATTTGCAGTGGTGTTTAAGCCTGGCCAGGAGTTGGTGAAGTACAAGAGAGTTGTGACGAATGTTGGGAGTGTTGCTGATGCAGTTTATGAGGTAAATGTGGATGCTCCGGCGGGTGTTGAAATCAGTGTTGAGCCGAGTAAGCTGGTTTTCAGTGAAGAAAATCAGACTCAGAGTTATGAGGTTACATTTGCGAAAGGTGCTGGGTACGGAAATGGGGAGAGATATGGGTCAATTGAGTGGAGCAATGGGCATCACCATGTGAGGAGTCCAGTTGCTGTTAGGTGGAGCAATACTGGGTATTCAGCCTCCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001763 GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006508 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009653 GO:0010016 GO:0010150 GO:0010223 GO:0010346 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0030312 GO:0031090 GO:0032501 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0070011 GO:0071704 GO:0071944 GO:0090693 GO:0098588 GO:0098805 GO:0099402 GO:0140096 GO:1901564 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

776

Amino Acids

82.5

Weight (kDa)

6.29

Isoelectric Point (pI)

38.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	36 - 114	7.1e-18	Peptidase inhibitor I9
Peptidase_S8	PF00082	138 - 593	4.8e-50	Subtilase family
PA	PF02225	379 - 463	3.6e-13	PA domain
fn3_6	PF17766	667 - 765	1.1e-28	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14067
fragaria_vesca	FvH4_6g35010
malus_domestica	MD09G1180500.v1.1 MD17G1166500.v1.1
prunus_persica	Prupe.3G039000_v2.0.a1
pyrus_communis	pycom09g09790
rosa_chinensis	RchiOBHm_Chr2g0146061
rosa_laevigata	RLG00000020182
rosa_multiflora	Rmu_sc0010454.1_g000002 Rmu_sc0014682.1_g000001
rosa_roxburghii	Rroxscaffold_152G00434860 Rroxscaffold_2G00100300
rosa_rugosa	Rorug02G0393600
rosa_samantha	Rh2AG449000 Rh2BG461400 Rh2CG436000 Rh2DG470600
rosa_wichuraiana	Rw2G036670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1268
AasI	GACNNNNNNGTC	1 cut(s)	1082
AatII	GACGTC	1 cut(s)	420
Acc36I	ACCTGC	1 cut(s)	1268
AccB1I	GGYRCC	2 cut(s)	566, 662
AccB7I	CCANNNNNTGG	1 cut(s)	2047
AccBSI	CCGCTC	2 cut(s)	186, 1317
AccI	GTMKAC	1 cut(s)	1146
AccII	CGCG	7 cut(s)	237, 284, 410, 645, 903, 914, 986
AccIII	TCCGGA	2 cut(s)	1516, 1699
AclWI	GGATC	4 cut(s)	630, 1292, 1788, 1829
AcoI	YGGCCR	2 cut(s)	747, 2038
AcsI	RAATTY	2 cut(s)	1433, 1504
AcvI	CACGTG	1 cut(s)	121
AcyI	GRCGYC	3 cut(s)	417, 567, 1805
AdeI	CACNNNGTG	1 cut(s)	2275
AfaI	GTAC	5 cut(s)	170, 1106, 1172, 2057, 2222
AfiI	CCNNNNNNNGG	5 cut(s)	58, 274, 447, 687, 2047
AflIII	ACRYGT	1 cut(s)	120
AgsI	TTSAA	7 cut(s)	583, 1090, 1132, 1528, 1627, 2005, 2135
AjiI	CACGTC	1 cut(s)	501
AjnI	CCWGG	6 cut(s)	273, 692, 1546, 1993, 2035, 2040
Alw21I	GWGCWC	1 cut(s)	1907
Alw26I	GTCTC	6 cut(s)	491, 958, 1149, 1191, 1606, 1713
AlwI	GGATC	4 cut(s)	630, 1292, 1788, 1829
AlwNI	CAGNNNCTG	1 cut(s)	2291
Ama87I	CYCGRG	4 cut(s)	452, 460, 475, 1856
Aor13HI	TCCGGA	2 cut(s)	1516, 1699
ApaI	GGGCCC	1 cut(s)	981
ApeKI	GCWGC	4 cut(s)	767, 1376, 1676, 1715
ApoI	RAATTY	2 cut(s)	1433, 1504
Asp700I	GAANNNNTTC	1 cut(s)	1326
AspA2I	CCTAGG	1 cut(s)	1922
AspLEI	GCGC	7 cut(s)	239, 286, 459, 569, 887, 986, 1265
AsuC2I	CCSGG	8 cut(s)	442, 494, 976, 981, 1765, 1825, 1857, 1858
AsuHPI	GGTGA	8 cut(s)	92, 197, 1331, 1334, 1747, 2009, 2062, 2261
AsuII	TTCGAA	1 cut(s)	1687
AvaI	CYCGRG	4 cut(s)	452, 460, 475, 1856
AvaII	GGWCC	5 cut(s)	485, 690, 826, 1499, 1919
AvrII	CCTAGG	1 cut(s)	1922
BaeGI	GKGCMC	2 cut(s)	981, 1849
BalI	TGGCCA	2 cut(s)	749, 2040
BanI	GGYRCC	2 cut(s)	566, 662
BanII	GRGCYC	1 cut(s)	981
BbrPI	CACGTG	1 cut(s)	121
BbsI	GAAGAC	1 cut(s)	1078
Bbv12I	GWGCWC	1 cut(s)	1907
BbvI	GCAGC	4 cut(s)	779, 1363, 1688, 1702
BccI	CCATC	3 cut(s)	185, 917, 1474
BcgI	CGANNNNNNTGC	2 cut(s)	1523, 1557
BciT130I	CCWGG	6 cut(s)	275, 694, 1548, 1995, 2037, 2042
BcnI	CCSGG	8 cut(s)	442, 494, 976, 981, 1765, 1825, 1857, 1858
BcoDI	GTCTC	6 cut(s)	491, 958, 1149, 1191, 1606, 1713
BfaI	CTAG	4 cut(s)	1121, 1562, 1923, 1989
BfmI	CTRYAG	1 cut(s)	963
BfoI	RGCGCY	4 cut(s)	460, 570, 888, 1266
BfuAI	ACCTGC	1 cut(s)	1268
BlnI	CCTAGG	1 cut(s)	1922
Bme18I	GGWCC	5 cut(s)	485, 690, 826, 1499, 1919
BmeT110I	CYCGRG	4 cut(s)	452, 460, 475, 1856
BmgBI	CACGTC	1 cut(s)	501
BmiI	GGNNCC	9 cut(s)	486, 487, 568, 664, 691, 874, 979, 1500, 1822
BmrI	ACTGGG	1 cut(s)	2319
BmsI	GCATC	3 cut(s)	2083, 2107, 2275
BmuI	ACTGGG	1 cut(s)	2319
BoxI	GACNNNNGTC	1 cut(s)	477
BpiI	GAAGAC	1 cut(s)	1078
BpmI	CTGGAG	2 cut(s)	272, 1569
Bpu14I	TTCGAA	1 cut(s)	1687
BpuMI	CCSGG	8 cut(s)	442, 494, 976, 981, 1765, 1825, 1857, 1858
BsaAI	YACGTR	1 cut(s)	121
BsaHI	GRCGYC	3 cut(s)	417, 567, 1805
BsaI	GGTCTC	3 cut(s)	958, 1191, 1713
BsaWI	WCCGGW	4 cut(s)	102, 552, 1516, 1699
BsaXI	ACNNNNNCTCC	4 cut(s)	659, 689, 842, 872
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 274, 447, 687, 2047
Bse118I	RCCGGY	2 cut(s)	524, 683
Bse1I	ACTGG	4 cut(s)	289, 1579, 2285, 2314
Bse3DI	GCAATG	2 cut(s)	1671, 2266
BseAI	TCCGGA	2 cut(s)	1516, 1699
BseBI	CCWGG	6 cut(s)	275, 694, 1548, 1995, 2037, 2042
BseGI	GGATG	5 cut(s)	177, 418, 1643, 1966, 2122
BseLI	CCNNNNNNNGG	5 cut(s)	58, 274, 447, 687, 2047
BseMI	GCAATG	2 cut(s)	1671, 2266
BseMII	CTCAG	1 cut(s)	2198
BseNI	ACTGG	4 cut(s)	289, 1579, 2285, 2314
BseRI	GAGGAG	3 cut(s)	142, 209, 2293
BseSI	GKGCMC	2 cut(s)	981, 1849
BseXI	GCAGC	4 cut(s)	779, 1363, 1688, 1702
BseYI	CCCAGC	6 cut(s)	936, 1054, 1351, 1565, 1955, 2216
Bsh1236I	CGCG	7 cut(s)	237, 284, 410, 645, 903, 914, 986
Bsh1285I	CGRYCG	2 cut(s)	901, 918
BshNI	GGYRCC	2 cut(s)	566, 662
BsiEI	CGRYCG	2 cut(s)	901, 918
BsiHKAI	GWGCWC	1 cut(s)	1907
BsiHKCI	CYCGRG	4 cut(s)	452, 460, 475, 1856
BslFI	GGGAC	5 cut(s)	277, 302, 471, 476, 1334
BslI	CCNNNNNNNGG	5 cut(s)	58, 274, 447, 687, 2047
BsmAI	GTCTC	6 cut(s)	491, 958, 1149, 1191, 1606, 1713
BsmBI	CGTCTC	2 cut(s)	491, 1606
BsmFI	GGGAC	5 cut(s)	277, 302, 471, 476, 1334
BsmI	GAATGC	2 cut(s)	923, 1895
Bso31I	GGTCTC	3 cut(s)	958, 1191, 1713
BsoBI	CYCGRG	4 cut(s)	452, 460, 475, 1856
Bsp119I	TTCGAA	1 cut(s)	1687
Bsp120I	GGGCCC	1 cut(s)	977
Bsp1286I	GDGCHC	3 cut(s)	981, 1849, 1907
Bsp13I	TCCGGA	2 cut(s)	1516, 1699
Bsp19I	CCATGG	4 cut(s)	244, 612, 822, 1359
Bsp68I	TCGCGA	2 cut(s)	903, 914
BspCNI	CTCAG	1 cut(s)	2197
BspEI	TCCGGA	2 cut(s)	1516, 1699
BspFNI	CGCG	7 cut(s)	237, 284, 410, 645, 903, 914, 986
BspLI	GGNNCC	9 cut(s)	486, 487, 568, 664, 691, 874, 979, 1500, 1822
BspMAI	CTGCAG	1 cut(s)	967
BspMI	ACCTGC	1 cut(s)	1268
BspPI	GGATC	4 cut(s)	630, 1292, 1788, 1829
BspQI	GCTCTTC	1 cut(s)	1317
BspT104I	TTCGAA	1 cut(s)	1687
BspT107I	GGYRCC	2 cut(s)	566, 662
BspTNI	GGTCTC	3 cut(s)	958, 1191, 1713
BsrBI	CCGCTC	2 cut(s)	186, 1317
BsrDI	GCAATG	2 cut(s)	1671, 2266
BsrFI	RCCGGY	2 cut(s)	524, 683
BsrI	ACTGG	4 cut(s)	289, 1579, 2285, 2314
BssAI	RCCGGY	2 cut(s)	524, 683
BssNI	GRCGYC	3 cut(s)	417, 567, 1805
BssT1I	CCWWGG	6 cut(s)	244, 612, 822, 1010, 1359, 1922
Bst2UI	CCWGG	6 cut(s)	275, 694, 1548, 1995, 2037, 2042
Bst4CI	ACNGT	5 cut(s)	98, 1024, 1197, 1447, 1982
Bst6I	CTCTTC	2 cut(s)	1305, 1317
BstACI	GRCGYC	3 cut(s)	417, 567, 1805
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstBAI	YACGTR	1 cut(s)	121
BstBI	TTCGAA	1 cut(s)	1687
BstC8I	GCNNGC	9 cut(s)	141, 335, 526, 685, 709, 751, 877, 1275, 1658
BstDEI	CTNAG	1 cut(s)	2184
BstDSI	CCRYGG	5 cut(s)	244, 612, 658, 822, 1359
BstEII	GGTNACC	1 cut(s)	98
BstF5I	GGATG	5 cut(s)	177, 418, 1643, 1966, 2122
BstFNI	CGCG	7 cut(s)	237, 284, 410, 645, 903, 914, 986
BstH2I	RGCGCY	4 cut(s)	460, 570, 888, 1266
BstHHI	GCGC	7 cut(s)	239, 286, 459, 569, 887, 986, 1265
BstMAI	GTCTC	6 cut(s)	491, 958, 1149, 1191, 1606, 1713
BstMCI	CGRYCG	2 cut(s)	901, 918
BstNI	CCWGG	6 cut(s)	275, 694, 1548, 1995, 2037, 2042
BstNSI	RCATGY	3 cut(s)	328, 1664, 1832
BstPAI	GACNNNNGTC	1 cut(s)	477
BstPI	GGTNACC	1 cut(s)	98
BstSFI	CTRYAG	1 cut(s)	963
BstSLI	GKGCMC	2 cut(s)	981, 1849
BstUI	CGCG	7 cut(s)	237, 284, 410, 645, 903, 914, 986
BstV1I	GCAGC	4 cut(s)	779, 1363, 1688, 1702
BstV2I	GAAGAC	1 cut(s)	1078
BstX2I	RGATCY	2 cut(s)	635, 1780
BstXI	CCANNNNNNTGG	1 cut(s)	745
BstYI	RGATCY	2 cut(s)	635, 1780
BtgI	CCRYGG	5 cut(s)	244, 612, 658, 822, 1359
BtgZI	GCGATG	3 cut(s)	895, 988, 1452
BtrI	CACGTC	1 cut(s)	501
BtsCI	GGATG	5 cut(s)	177, 418, 1643, 1966, 2122
BtsI	GCAGTG	1 cut(s)	2028
BtsIMutI	CAGTG	3 cut(s)	2028, 2146, 2173
BtuMI	TCGCGA	2 cut(s)	903, 914
BveI	ACCTGC	1 cut(s)	1268
Cac8I	GCNNGC	9 cut(s)	141, 335, 526, 685, 709, 751, 877, 1275, 1658
CaiI	CAGNNNCTG	1 cut(s)	2291
CfoI	GCGC	7 cut(s)	239, 286, 459, 569, 887, 986, 1265
Cfr10I	RCCGGY	2 cut(s)	524, 683
Cfr9I	CCCGGG	1 cut(s)	1856
CseI	GACGC	1 cut(s)	1813
Csp6I	GTAC	5 cut(s)	169, 1105, 1171, 2056, 2221
CspCI	CAANNNNNGTGG	2 cut(s)	1344, 1379
CviQI	GTAC	5 cut(s)	169, 1105, 1171, 2056, 2221
DdeI	CTNAG	1 cut(s)	2184
DinI	GGCGCC	1 cut(s)	568
DraIII	CACNNNGTG	1 cut(s)	2275
DrdI	GACNNNNNNGTC	1 cut(s)	1082
DseDI	GACNNNNNNGTC	1 cut(s)	1082
EaeI	YGGCCR	2 cut(s)	747, 2038
Eam1104I	CTCTTC	2 cut(s)	1305, 1317
EarI	CTCTTC	2 cut(s)	1305, 1317
EciI	GGCGGA	3 cut(s)	244, 879, 1167
Eco130I	CCWWGG	6 cut(s)	244, 612, 822, 1010, 1359, 1922
Eco147I	AGGCCT	1 cut(s)	1694
Eco24I	GRGCYC	1 cut(s)	981
Eco31I	GGTCTC	3 cut(s)	958, 1191, 1713
Eco32I	GATATC	1 cut(s)	1873
Eco47I	GGWCC	5 cut(s)	485, 690, 826, 1499, 1919
Eco72I	CACGTG	1 cut(s)	121
Eco88I	CYCGRG	4 cut(s)	452, 460, 475, 1856
Eco91I	GGTNACC	1 cut(s)	98
EcoO109I	RGGNCCY	1 cut(s)	485
EcoO65I	GGTNACC	1 cut(s)	98
EcoRII	CCWGG	6 cut(s)	273, 692, 1546, 1993, 2035, 2040
EcoRV	GATATC	1 cut(s)	1873
EcoT14I	CCWWGG	6 cut(s)	244, 612, 822, 1010, 1359, 1922
EcoT38I	GRGCYC	1 cut(s)	981
EgeI	GGCGCC	1 cut(s)	568
EheI	GGCGCC	1 cut(s)	568
ErhI	CCWWGG	6 cut(s)	244, 612, 822, 1010, 1359, 1922
Esp3I	CGTCTC	2 cut(s)	491, 1606
FalI	AAGNNNNNCTT	2 cut(s)	1314, 1346
FaqI	GGGAC	5 cut(s)	277, 302, 471, 476, 1334
FauI	CCCGC	6 cut(s)	307, 338, 356, 680, 1665, 2119
FauNDI	CATATG	1 cut(s)	2327
FblI	GTMKAC	1 cut(s)	1146
FokI	GGATG	5 cut(s)	164, 425, 1630, 1973, 2129
FriOI	GRGCYC	1 cut(s)	981
FspBI	CTAG	4 cut(s)	1121, 1562, 1923, 1989
GlaI	GCGC	7 cut(s)	238, 285, 458, 568, 886, 985, 1264
GsaI	CCCAGC	6 cut(s)	940, 1058, 1355, 1569, 1959, 2220
GsuI	CTGGAG	2 cut(s)	272, 1569
HaeII	RGCGCY	4 cut(s)	460, 570, 888, 1266
HgaI	GACGC	1 cut(s)	1813
HhaI	GCGC	7 cut(s)	239, 286, 459, 569, 887, 986, 1265
Hin1I	GRCGYC	3 cut(s)	417, 567, 1805
Hin6I	GCGC	7 cut(s)	237, 284, 457, 567, 885, 984, 1263
HinP1I	GCGC	7 cut(s)	237, 284, 457, 567, 885, 984, 1263
HindIII	AAGCTT	1 cut(s)	1271
HphI	GGTGA	8 cut(s)	92, 197, 1331, 1334, 1747, 2009, 2062, 2261
Hpy166II	GTNNAC	8 cut(s)	118, 171, 850, 990, 1126, 1147, 1555, 1572
Hpy188III	TCNNGA	9 cut(s)	434, 633, 902, 913, 1040, 1517, 1611, 1700, 1942
Hpy8I	GTNNAC	8 cut(s)	118, 171, 850, 990, 1126, 1147, 1555, 1572
Hpy99I	CGWCG	6 cut(s)	98, 317, 845, 872, 1079, 1807
HpyAV	CCTTC	4 cut(s)	40, 207, 647, 1467
HpyCH4III	ACNGT	5 cut(s)	98, 1024, 1197, 1447, 1982
HpyCH4IV	ACGT	4 cut(s)	107, 120, 417, 500
HpyF3I	CTNAG	1 cut(s)	2184
HpySE526I	ACGT	4 cut(s)	107, 120, 417, 500
Hsp92I	GRCGYC	3 cut(s)	417, 567, 1805
HspAI	GCGC	7 cut(s)	237, 284, 457, 567, 885, 984, 1263
KasI	GGCGCC	1 cut(s)	566
KflI	GGGWCCC	1 cut(s)	485
Kpn2I	TCCGGA	2 cut(s)	1516, 1699
KroI	GCCGGC	2 cut(s)	524, 683
KroNI	GCCGGC	2 cut(s)	526, 685
LguI	GCTCTTC	1 cut(s)	1317
Lsp1109I	GCAGC	4 cut(s)	779, 1363, 1688, 1702
LweI	GCATC	3 cut(s)	2083, 2107, 2275
MaeI	CTAG	4 cut(s)	1121, 1562, 1923, 1989
MaeII	ACGT	4 cut(s)	107, 120, 417, 500
MaeIII	GTNAC	8 cut(s)	67, 98, 517, 548, 1238, 1735, 2068, 2197
MbiI	CCGCTC	2 cut(s)	186, 1317
MfeI	CAATTG	1 cut(s)	2247
MflI	RGATCY	2 cut(s)	635, 1780
MhlI	GDGCHC	3 cut(s)	981, 1849, 1907
MlsI	TGGCCA	2 cut(s)	749, 2040
MluCI	AATT	7 cut(s)	1433, 1449, 1504, 1632, 1759, 2005, 2247
MluNI	TGGCCA	2 cut(s)	749, 2040
Mly113I	GGCGCC	1 cut(s)	567
MlyI	GAGTC	9 cut(s)	467, 629, 855, 899, 1092, 1257, 1507, 2176, 2290
MmeI	TCCRAC	6 cut(s)	117, 426, 648, 850, 1006, 1442
Mox20I	TGGCCA	2 cut(s)	749, 2040
MreI	CGCCGGCG	2 cut(s)	524, 683
MroI	TCCGGA	2 cut(s)	1516, 1699
MroNI	GCCGGC	2 cut(s)	524, 683
MroXI	GAANNNNTTC	1 cut(s)	1326
MscI	TGGCCA	2 cut(s)	749, 2040
MseI	TTAA	4 cut(s)	1269, 1722, 1851, 2031
MslI	CAYNNNNRTG	4 cut(s)	1646, 1665, 1900, 2271
Msp20I	TGGCCA	2 cut(s)	749, 2040
MspA1I	CMGCKG	2 cut(s)	165, 879
MunI	CAATTG	1 cut(s)	2247
Mva1269I	GAATGC	2 cut(s)	923, 1895
MvaI	CCWGG	6 cut(s)	275, 694, 1548, 1995, 2037, 2042
MvnI	CGCG	7 cut(s)	237, 284, 410, 645, 903, 914, 986
NaeI	GCCGGC	2 cut(s)	526, 685
NarI	GGCGCC	1 cut(s)	567
NciI	CCSGG	8 cut(s)	442, 494, 976, 981, 1765, 1825, 1857, 1858
NcoI	CCATGG	4 cut(s)	244, 612, 822, 1359
NdeI	CATATG	1 cut(s)	2327
NgoMIV	GCCGGC	2 cut(s)	524, 683
NlaIV	GGNNCC	9 cut(s)	486, 487, 568, 664, 691, 874, 979, 1500, 1822
NmeAIII	GCCGAG	3 cut(s)	345, 935, 2175
NmuCI	GTSAC	4 cut(s)	98, 517, 1735, 2068
NruI	TCGCGA	2 cut(s)	903, 914
NspI	RCATGY	3 cut(s)	328, 1664, 1832
NspV	TTCGAA	1 cut(s)	1687
PaqCI	CACCTGC	1 cut(s)	1268
PceI	AGGCCT	1 cut(s)	1694
PciSI	GCTCTTC	1 cut(s)	1317
PcsI	WCGNNNNNNNCGW	6 cut(s)	372, 414, 432, 624, 729, 1071
PctI	GAATGC	2 cut(s)	923, 1895
PdiI	GCCGGC	2 cut(s)	526, 685
PdmI	GAANNNNTTC	1 cut(s)	1326
PfeI	GAWTC	8 cut(s)	593, 629, 762, 803, 1015, 1337, 1607, 1799
PflFI	GACNNNGTC	1 cut(s)	845
PflMI	CCANNNNNTGG	1 cut(s)	2047
PfoI	TCCNGGA	3 cut(s)	492, 1546, 1763
Ple19I	CGATCG	2 cut(s)	901, 918
PleI	GAGTC	9 cut(s)	467, 628, 854, 899, 1091, 1256, 1507, 2176, 2289
PluTI	GGCGCC	1 cut(s)	570
PmaCI	CACGTG	1 cut(s)	121
PmlI	CACGTG	1 cut(s)	121
PpsI	GAGTC	9 cut(s)	467, 628, 854, 899, 1091, 1256, 1507, 2176, 2289
Ppu21I	YACGTR	1 cut(s)	121
PpuMI	RGGWCCY	1 cut(s)	485
PshAI	GACNNNNGTC	1 cut(s)	477
Psp5II	RGGWCCY	1 cut(s)	485
Psp6I	CCWGG	6 cut(s)	273, 692, 1546, 1993, 2035, 2040
PspCI	CACGTG	1 cut(s)	121
PspEI	GGTNACC	1 cut(s)	98
PspFI	CCCAGC	6 cut(s)	936, 1054, 1351, 1565, 1955, 2216
PspGI	CCWGG	6 cut(s)	273, 692, 1546, 1993, 2035, 2040
PspN4I	GGNNCC	9 cut(s)	486, 487, 568, 664, 691, 874, 979, 1500, 1822
PspOMI	GGGCCC	1 cut(s)	977
PspPPI	RGGWCCY	1 cut(s)	485
PstI	CTGCAG	1 cut(s)	967
PstNI	CAGNNNCTG	1 cut(s)	2291
PsuI	RGATCY	2 cut(s)	635, 1780
PsyI	GACNNNGTC	1 cut(s)	845
PvuI	CGATCG	2 cut(s)	901, 918
RruI	TCGCGA	2 cut(s)	903, 914
RsaI	GTAC	5 cut(s)	170, 1106, 1172, 2057, 2222
RsaNI	GTAC	5 cut(s)	169, 1105, 1171, 2056, 2221
RseI	CAYNNNNRTG	4 cut(s)	1646, 1665, 1900, 2271
SapI	GCTCTTC	1 cut(s)	1317
SaqAI	TTAA	4 cut(s)	1269, 1722, 1851, 2031
SchI	GAGTC	9 cut(s)	467, 629, 855, 899, 1092, 1257, 1507, 2176, 2290
SduI	GDGCHC	3 cut(s)	981, 1849, 1907
SfaNI	GCATC	3 cut(s)	2083, 2107, 2275
SfcI	CTRYAG	1 cut(s)	963
SfoI	GGCGCC	1 cut(s)	568
SfuI	TTCGAA	1 cut(s)	1687
SgrAI	CRCCGGYG	2 cut(s)	524, 683
SinI	GGWCC	5 cut(s)	485, 690, 826, 1499, 1919
SmaI	CCCGGG	1 cut(s)	1858
SmiMI	CAYNNNNRTG	4 cut(s)	1646, 1665, 1900, 2271
Sse9I	AATT	7 cut(s)	1433, 1449, 1504, 1632, 1759, 2005, 2247
SseBI	AGGCCT	1 cut(s)	1694
SspDI	GGCGCC	1 cut(s)	566
SspI	AATATT	1 cut(s)	131
SspMI	CTAG	4 cut(s)	1121, 1562, 1923, 1989
StuI	AGGCCT	1 cut(s)	1694
StyI	CCWWGG	6 cut(s)	244, 612, 822, 1010, 1359, 1922
TaaI	ACNGT	5 cut(s)	98, 1024, 1197, 1447, 1982
TaiI	ACGT	4 cut(s)	110, 123, 420, 503
TaqI	TCGA	8 cut(s)	125, 435, 801, 1490, 1610, 1687, 1802, 1907
TasI	AATT	7 cut(s)	1433, 1449, 1504, 1632, 1759, 2005, 2247
TatI	WGTACW	2 cut(s)	1104, 2055
TauI	GCSGC	6 cut(s)	165, 821, 882, 885, 935, 1164
TfiI	GAWTC	8 cut(s)	593, 629, 762, 803, 1015, 1337, 1607, 1799
Tru1I	TTAA	4 cut(s)	1269, 1722, 1851, 2031
Tru9I	TTAA	4 cut(s)	1269, 1722, 1851, 2031
TscAI	CASTG	3 cut(s)	2028, 2146, 2173
TseFI	GTSAC	4 cut(s)	98, 517, 1735, 2068
TseI	GCWGC	4 cut(s)	767, 1376, 1676, 1715
Tsp45I	GTSAC	4 cut(s)	98, 517, 1735, 2068
TspDTI	ATGAA	7 cut(s)	6, 12, 22, 53, 100, 1805, 1888
TspGWI	ACGGA	6 cut(s)	301, 856, 858, 1322, 2001, 2238
TspMI	CCCGGG	1 cut(s)	1856
TspRI	CASTG	3 cut(s)	2028, 2146, 2173
Tth111I	GACNNNGTC	1 cut(s)	845
Van91I	CCANNNNNTGG	1 cut(s)	2047
VpaK11BI	GGWCC	5 cut(s)	485, 690, 826, 1499, 1919
XapI	RAATTY	2 cut(s)	1433, 1504
XceI	RCATGY	3 cut(s)	328, 1664, 1832
XmaI	CCCGGG	1 cut(s)	1856
XmaJI	CCTAGG	1 cut(s)	1922
XmiI	GTMKAC	1 cut(s)	1146
XmnI	GAANNNNTTC	1 cut(s)	1326
XspI	CTAG	4 cut(s)	1121, 1562, 1923, 1989
ZraI	GACGTC	1 cut(s)	418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.