RchiOBHm_Chr2g0147281

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
64907133 .. 64909386
2254 bp
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UTR
Exon/CDS
Intron
PRQ51693

Sequence Viewer

Length: 129 bp
ATGTTCTTAACAACTCTCCAGAAGGAATCGAGGCCTGAAATTGAAGTTTTTATGTCGAAATCGTGGCTCGCCGGTTTCTGCATTTCTTCGCCGGTTTCTGGAAATTTTCCGGCCACCTTCAAACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

42

Amino Acids

4.73

Weight (kDa)

7.94

Isoelectric Point (pI)

84.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 1 cut(s) 103
AfiI CCNNNNNNNGG 1 cut(s) 98
AgsI TTSAA 2 cut(s) 44, 121
AoxI GGCC 2 cut(s) 32, 111
ApoI RAATTY 1 cut(s) 103
Bsc4I CCNNNNNNNGG 1 cut(s) 98
Bse118I RCCGGY 2 cut(s) 71, 91
BseLI CCNNNNNNNGG 1 cut(s) 98
BshFI GGCC 2 cut(s) 34, 113
BsiSI CCGG 3 cut(s) 72, 92, 110
BslI CCNNNNNNNGG 1 cut(s) 98
BsnI GGCC 2 cut(s) 34, 113
BspANI GGCC 2 cut(s) 34, 113
BsrFI RCCGGY 2 cut(s) 71, 91
BssAI RCCGGY 2 cut(s) 71, 91
Bst4CI ACNGT 1 cut(s) 126
BstC8I GCNNGC 1 cut(s) 69
BsuRI GGCC 2 cut(s) 34, 113
Cac8I GCNNGC 1 cut(s) 69
Cfr10I RCCGGY 2 cut(s) 71, 91
CviJI RGCY 3 cut(s) 34, 67, 113
CviKI_1 RGCY 3 cut(s) 34, 67, 113
EaeI YGGCCR 1 cut(s) 111
Eco147I AGGCCT 1 cut(s) 34
FaiI YATR 1 cut(s) 53
HaeIII GGCC 2 cut(s) 34, 113
HapII CCGG 3 cut(s) 72, 92, 110
HinfI GANTC 1 cut(s) 26
HpaII CCGG 3 cut(s) 72, 92, 110
Hpy188III TCNNGA 2 cut(s) 19, 99
HpyAV CCTTC 2 cut(s) 16, 127
HpyCH4III ACNGT 1 cut(s) 126
HpyCH4V TGCA 1 cut(s) 81
LpnPI CCDG 6 cut(s) 32, 48, 84, 85, 105, 123
MboII GAAGA 1 cut(s) 78
MluCI AATT 2 cut(s) 39, 103
MnlI CCTC 1 cut(s) 24
MseI TTAA 1 cut(s) 8
MspI CCGG 3 cut(s) 72, 92, 110
PceI AGGCCT 1 cut(s) 34
PfeI GAWTC 1 cut(s) 26
SaqAI TTAA 1 cut(s) 8
SetI ASST 1 cut(s) 119
SgeI CNNG 9 cut(s) 31, 42, 47, 75, 80, 84, 104, 111, 122
Sse9I AATT 2 cut(s) 39, 103
SseBI AGGCCT 1 cut(s) 34
StuI AGGCCT 1 cut(s) 34
TaaI ACNGT 1 cut(s) 126
TaqI TCGA 2 cut(s) 29, 56
TasI AATT 2 cut(s) 39, 103
TfiI GAWTC 1 cut(s) 26
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
XapI RAATTY 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.