RchiOBHm_Chr4g0401101

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
19085781 .. 19088152
2372 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37306

Sequence Viewer

Length: 138 bp
ATGTTCTTAAAAACTCTCCAGAAGGAATCGAGGCCAAAAGATGAAGTTTTTACGTGGAAAAATCGGTTGGACGGTTTCTGCAAATTTCGCCGGTTTCTGAAAATTTTTCCGGCCATCACGACTGTTTTAGGTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

45

Amino Acids

5.42

Weight (kDa)

10.01

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 2 cut(s) 83, 102
AjuI GAANNNNNNNTTGG 2 cut(s) 50, 82
AoxI GGCC 2 cut(s) 32, 111
ApoI RAATTY 2 cut(s) 83, 102
BccI CCATC 1 cut(s) 122
BsaAI YACGTR 1 cut(s) 54
Bse118I RCCGGY 1 cut(s) 90
BshFI GGCC 2 cut(s) 34, 113
BsiSI CCGG 2 cut(s) 91, 110
BsnI GGCC 2 cut(s) 34, 113
BspANI GGCC 2 cut(s) 34, 113
BsrFI RCCGGY 1 cut(s) 90
BssAI RCCGGY 1 cut(s) 90
Bst4CI ACNGT 2 cut(s) 74, 124
BstBAI YACGTR 1 cut(s) 54
BstMWI GCNNNNNNNGC 1 cut(s) 87
BsuRI GGCC 2 cut(s) 34, 113
Cfr10I RCCGGY 1 cut(s) 90
CviJI RGCY 2 cut(s) 34, 113
CviKI_1 RGCY 2 cut(s) 34, 113
EaeI YGGCCR 1 cut(s) 111
HaeIII GGCC 2 cut(s) 34, 113
HapII CCGG 2 cut(s) 91, 110
HinfI GANTC 1 cut(s) 26
HpaII CCGG 2 cut(s) 91, 110
Hpy188I TCNGA 1 cut(s) 99
Hpy188III TCNNGA 2 cut(s) 19, 118
HpyAV CCTTC 1 cut(s) 16
HpyCH4III ACNGT 2 cut(s) 74, 124
HpyCH4IV ACGT 1 cut(s) 53
HpyCH4V TGCA 1 cut(s) 81
HpyF10VI GCNNNNNNNGC 1 cut(s) 87
HpySE526I ACGT 1 cut(s) 53
LpnPI CCDG 3 cut(s) 32, 104, 123
MaeII ACGT 1 cut(s) 53
MluCI AATT 2 cut(s) 83, 102
MmeI TCCRAC 1 cut(s) 48
MnlI CCTC 1 cut(s) 24
MseI TTAA 1 cut(s) 8
MspI CCGG 2 cut(s) 91, 110
MwoI GCNNNNNNNGC 1 cut(s) 87
PfeI GAWTC 1 cut(s) 26
Ppu21I YACGTR 1 cut(s) 54
SaqAI TTAA 1 cut(s) 8
SetI ASST 2 cut(s) 56, 133
SgeI CNNG 6 cut(s) 31, 42, 66, 103, 122, 130
Sse9I AATT 2 cut(s) 83, 102
TaaI ACNGT 2 cut(s) 74, 124
TaiI ACGT 1 cut(s) 56
TaqI TCGA 1 cut(s) 29
TasI AATT 2 cut(s) 83, 102
TfiI GAWTC 1 cut(s) 26
Tru1I TTAA 1 cut(s) 8
Tru9I TTAA 1 cut(s) 8
TspDTI ATGAA 1 cut(s) 57
XapI RAATTY 2 cut(s) 83, 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.