Isoamylase 3
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0347231 RchiOBHm_Chr2g0148441 |
| rosa_laevigata | RLG00000029050 |
| rosa_roxburghii | Rroxscaffold_6G00419110 |
| rosa_samantha | Rh2AG478400 Rh2CG464600 Rh2DG555200 Rh3CG254100 Rh5DG281200 Rh7DG158900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AfaI | GTAC | 2 cut(s) | 70, 83 |
| AgsI | TTSAA | 1 cut(s) | 90 |
| Alw26I | GTCTC | 1 cut(s) | 100 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 1 cut(s) | 117 |
| BccI | CCATC | 1 cut(s) | 45 |
| BcoDI | GTCTC | 1 cut(s) | 100 |
| BfaI | CTAG | 1 cut(s) | 44 |
| BmsI | GCATC | 2 cut(s) | 48, 125 |
| BsaBI | GATNNNNATC | 1 cut(s) | 21 |
| Bse8I | GATNNNNATC | 1 cut(s) | 21 |
| BseJI | GATNNNNATC | 1 cut(s) | 21 |
| BseMII | CTCAG | 1 cut(s) | 154 |
| BseRI | GAGGAG | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 100 |
| BspCNI | CTCAG | 1 cut(s) | 153 |
| Bst4CI | ACNGT | 1 cut(s) | 9 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstMAI | GTCTC | 1 cut(s) | 100 |
| Csp6I | GTAC | 2 cut(s) | 69, 82 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 1 cut(s) | 145 |
| CviKI_1 | RGCY | 1 cut(s) | 145 |
| CviQI | GTAC | 2 cut(s) | 69, 82 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 5 cut(s) | 15, 21, 27, 76, 163 |
| FatI | CATG | 1 cut(s) | 13 |
| FspBI | CTAG | 1 cut(s) | 44 |
| Hin1II | CATG | 1 cut(s) | 17 |
| HinfI | GANTC | 1 cut(s) | 86 |
| HphI | GGTGA | 1 cut(s) | 117 |
| Hpy188I | TCNGA | 1 cut(s) | 33 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| HpyCH4III | ACNGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| LmnI | GCTCC | 1 cut(s) | 66 |
| LpnPI | CCDG | 2 cut(s) | 127, 131 |
| LweI | GCATC | 2 cut(s) | 48, 125 |
| MaeI | CTAG | 1 cut(s) | 44 |
| MboII | GAAGA | 2 cut(s) | 67, 114 |
| MluCI | AATT | 1 cut(s) | 101 |
| MnlI | CCTC | 1 cut(s) | 74 |
| NlaIII | CATG | 1 cut(s) | 17 |
| PfeI | GAWTC | 1 cut(s) | 86 |
| PsiI | TTATAA | 1 cut(s) | 21 |
| RsaI | GTAC | 2 cut(s) | 70, 83 |
| RsaNI | GTAC | 2 cut(s) | 69, 82 |
| SfaNI | GCATC | 2 cut(s) | 48, 125 |
| SgeI | CNNG | 4 cut(s) | 26, 56, 154, 158 |
| Sse9I | AATT | 1 cut(s) | 101 |
| SspMI | CTAG | 1 cut(s) | 44 |
| TaaI | ACNGT | 1 cut(s) | 9 |
| TaqI | TCGA | 1 cut(s) | 133 |
| TasI | AATT | 1 cut(s) | 101 |
| TfiI | GAWTC | 1 cut(s) | 86 |
| TspDTI | ATGAA | 2 cut(s) | 17, 143 |
| TspGWI | ACGGA | 1 cut(s) | 56 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XbaI | TCTAGA | 1 cut(s) | 43 |
| XspI | CTAG | 1 cut(s) | 44 |