Isoamylase 3
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0347231 RchiOBHm_Chr2g0148441 |
| rosa_laevigata | RLG00000029050 |
| rosa_roxburghii | Rroxscaffold_6G00419110 |
| rosa_samantha | Rh2AG478400 Rh2CG464600 Rh2DG555200 Rh3CG254100 Rh5DG281200 Rh7DG158900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 204 |
| AciI | CCGC | 1 cut(s) | 50 |
| AcsI | RAATTY | 1 cut(s) | 284 |
| AfaI | GTAC | 1 cut(s) | 266 |
| AgsI | TTSAA | 5 cut(s) | 46, 85, 118, 273, 376 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AluBI | AGCT | 3 cut(s) | 13, 22, 350 |
| AluI | AGCT | 3 cut(s) | 13, 22, 350 |
| Alw26I | GTCTC | 1 cut(s) | 283 |
| ApeKI | GCWGC | 1 cut(s) | 399 |
| ApoI | RAATTY | 1 cut(s) | 284 |
| AspLEI | GCGC | 1 cut(s) | 55 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 334, 366 |
| BbvI | GCAGC | 1 cut(s) | 411 |
| BccI | CCATC | 1 cut(s) | 228 |
| BcoDI | GTCTC | 1 cut(s) | 283 |
| BfaI | CTAG | 1 cut(s) | 227 |
| BfoI | RGCGCY | 1 cut(s) | 56 |
| BisI | GCNGC | 2 cut(s) | 51, 400 |
| BlsI | GCNGC | 2 cut(s) | 52, 401 |
| BmsI | GCATC | 2 cut(s) | 231, 308 |
| BsaBI | GATNNNNATC | 1 cut(s) | 204 |
| Bse8I | GATNNNNATC | 1 cut(s) | 204 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseJI | GATNNNNATC | 1 cut(s) | 204 |
| BseMII | CTCAG | 1 cut(s) | 337 |
| BseRI | GAGGAG | 1 cut(s) | 236 |
| BseXI | GCAGC | 1 cut(s) | 411 |
| BsmAI | GTCTC | 1 cut(s) | 283 |
| BspACI | CCGC | 1 cut(s) | 50 |
| BspCNI | CTCAG | 1 cut(s) | 336 |
| Bst4CI | ACNGT | 1 cut(s) | 192 |
| BstC8I | GCNNGC | 1 cut(s) | 168 |
| BstDEI | CTNAG | 1 cut(s) | 323 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstH2I | RGCGCY | 1 cut(s) | 56 |
| BstHHI | GCGC | 1 cut(s) | 55 |
| BstMAI | GTCTC | 1 cut(s) | 283 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstNSI | RCATGY | 1 cut(s) | 431 |
| BstV1I | GCAGC | 1 cut(s) | 411 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| BtsIMutI | CAGTG | 1 cut(s) | 107 |
| Cac8I | GCNNGC | 1 cut(s) | 168 |
| CfoI | GCGC | 1 cut(s) | 55 |
| Csp6I | GTAC | 1 cut(s) | 265 |
| CviAII | CATG | 2 cut(s) | 197, 428 |
| CviJI | RGCY | 6 cut(s) | 13, 22, 131, 328, 350, 415 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 22, 131, 328, 350, 415 |
| CviQI | GTAC | 1 cut(s) | 265 |
| DdeI | CTNAG | 1 cut(s) | 323 |
| FaeI | CATG | 2 cut(s) | 200, 431 |
| FaiI | YATR | 8 cut(s) | 185, 198, 204, 210, 252, 259, 344, 429 |
| FatI | CATG | 2 cut(s) | 196, 427 |
| Fnu4HI | GCNGC | 2 cut(s) | 51, 400 |
| FokI | GGATG | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 2 cut(s) | 51, 400 |
| FspBI | CTAG | 1 cut(s) | 227 |
| GlaI | GCGC | 1 cut(s) | 54 |
| GluI | GCNGC | 2 cut(s) | 51, 400 |
| HaeII | RGCGCY | 1 cut(s) | 56 |
| HhaI | GCGC | 1 cut(s) | 55 |
| Hin1II | CATG | 2 cut(s) | 200, 431 |
| Hin6I | GCGC | 1 cut(s) | 53 |
| HinP1I | GCGC | 1 cut(s) | 53 |
| HinfI | GANTC | 3 cut(s) | 25, 85, 269 |
| Hpy166II | GTNNAC | 1 cut(s) | 386 |
| Hpy188I | TCNGA | 1 cut(s) | 216 |
| Hpy188III | TCNNGA | 2 cut(s) | 227, 362 |
| Hpy8I | GTNNAC | 1 cut(s) | 386 |
| Hpy99I | CGWCG | 1 cut(s) | 397 |
| HpyAV | CCTTC | 1 cut(s) | 417 |
| HpyCH4III | ACNGT | 1 cut(s) | 192 |
| HpyCH4V | TGCA | 2 cut(s) | 74, 299 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| HpyF3I | CTNAG | 1 cut(s) | 323 |
| Hsp92II | CATG | 2 cut(s) | 200, 431 |
| HspAI | GCGC | 1 cut(s) | 53 |
| LmnI | GCTCC | 1 cut(s) | 249 |
| LpnPI | CCDG | 4 cut(s) | 152, 310, 314, 369 |
| Lsp1109I | GCAGC | 1 cut(s) | 411 |
| LweI | GCATC | 2 cut(s) | 231, 308 |
| MaeI | CTAG | 1 cut(s) | 227 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MluCI | AATT | 4 cut(s) | 75, 113, 171, 284 |
| MlyI | GAGTC | 1 cut(s) | 19 |
| MnlI | CCTC | 2 cut(s) | 152, 257 |
| MseI | TTAA | 2 cut(s) | 380, 433 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NlaIII | CATG | 2 cut(s) | 200, 431 |
| NspI | RCATGY | 1 cut(s) | 431 |
| PfeI | GAWTC | 2 cut(s) | 85, 269 |
| PkrI | GCNGC | 2 cut(s) | 52, 401 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| PsiI | TTATAA | 1 cut(s) | 204 |
| RsaI | GTAC | 1 cut(s) | 266 |
| RsaNI | GTAC | 1 cut(s) | 265 |
| SaqAI | TTAA | 2 cut(s) | 380, 433 |
| SatI | GCNGC | 2 cut(s) | 51, 400 |
| SchI | GAGTC | 1 cut(s) | 19 |
| SetI | ASST | 6 cut(s) | 15, 24, 83, 97, 101, 352 |
| SfaNI | GCATC | 2 cut(s) | 231, 308 |
| Sse9I | AATT | 4 cut(s) | 75, 113, 171, 284 |
| SsiI | CCGC | 1 cut(s) | 50 |
| SspMI | CTAG | 1 cut(s) | 227 |
| TaaI | ACNGT | 1 cut(s) | 192 |
| TaqI | TCGA | 1 cut(s) | 316 |
| TasI | AATT | 4 cut(s) | 75, 113, 171, 284 |
| TauI | GCSGC | 1 cut(s) | 53 |
| TfiI | GAWTC | 2 cut(s) | 85, 269 |
| Tru1I | TTAA | 2 cut(s) | 380, 433 |
| Tru9I | TTAA | 2 cut(s) | 380, 433 |
| TscAI | CASTG | 1 cut(s) | 114 |
| TseI | GCWGC | 1 cut(s) | 399 |
| TspDTI | ATGAA | 1 cut(s) | 200 |
| TspGWI | ACGGA | 1 cut(s) | 50 |
| TspRI | CASTG | 1 cut(s) | 114 |
| XapI | RAATTY | 1 cut(s) | 284 |
| XbaI | TCTAGA | 1 cut(s) | 226 |
| XceI | RCATGY | 1 cut(s) | 431 |
| XspI | CTAG | 1 cut(s) | 227 |