No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0347231 RchiOBHm_Chr2g0148441 |
| rosa_laevigata | RLG00000029050 |
| rosa_roxburghii | Rroxscaffold_6G00419110 |
| rosa_samantha | Rh2AG478400 Rh2CG464600 Rh2DG555200 Rh3CG254100 Rh5DG281200 Rh7DG158900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 50 |
| AclWI | GGATC | 1 cut(s) | 52 |
| AgsI | TTSAA | 2 cut(s) | 46, 85 |
| AluBI | AGCT | 1 cut(s) | 13 |
| AluI | AGCT | 1 cut(s) | 13 |
| AlwI | GGATC | 1 cut(s) | 52 |
| ApeKI | GCWGC | 1 cut(s) | 135 |
| AspLEI | GCGC | 1 cut(s) | 55 |
| BbvI | GCAGC | 1 cut(s) | 147 |
| BccI | CCATC | 1 cut(s) | 89 |
| BfoI | RGCGCY | 1 cut(s) | 56 |
| BisI | GCNGC | 2 cut(s) | 51, 136 |
| BlsI | GCNGC | 2 cut(s) | 52, 137 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseXI | GCAGC | 1 cut(s) | 147 |
| Bsp143I | GATC | 1 cut(s) | 57 |
| BspACI | CCGC | 1 cut(s) | 50 |
| BspPI | GGATC | 1 cut(s) | 52 |
| BssMI | GATC | 1 cut(s) | 57 |
| BstDEI | CTNAG | 2 cut(s) | 77, 104 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstH2I | RGCGCY | 1 cut(s) | 56 |
| BstHHI | GCGC | 1 cut(s) | 55 |
| BstKTI | GATC | 1 cut(s) | 60 |
| BstMBI | GATC | 1 cut(s) | 57 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstNSI | RCATGY | 1 cut(s) | 167 |
| BstV1I | GCAGC | 1 cut(s) | 147 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| CfoI | GCGC | 1 cut(s) | 55 |
| CviAII | CATG | 1 cut(s) | 164 |
| CviJI | RGCY | 3 cut(s) | 13, 22, 151 |
| CviKI_1 | RGCY | 3 cut(s) | 13, 22, 151 |
| DdeI | CTNAG | 2 cut(s) | 77, 104 |
| DpnI | GATC | 1 cut(s) | 59 |
| DpnII | GATC | 1 cut(s) | 57 |
| FaeI | CATG | 1 cut(s) | 167 |
| FaiI | YATR | 2 cut(s) | 90, 165 |
| FatI | CATG | 1 cut(s) | 163 |
| Fnu4HI | GCNGC | 2 cut(s) | 51, 136 |
| FokI | GGATG | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 2 cut(s) | 51, 136 |
| GlaI | GCGC | 1 cut(s) | 54 |
| GluI | GCNGC | 2 cut(s) | 51, 136 |
| HaeII | RGCGCY | 1 cut(s) | 56 |
| HhaI | GCGC | 1 cut(s) | 55 |
| Hin1II | CATG | 1 cut(s) | 167 |
| Hin6I | GCGC | 1 cut(s) | 53 |
| HinP1I | GCGC | 1 cut(s) | 53 |
| HincII | GTYRAC | 1 cut(s) | 111 |
| HindII | GTYRAC | 1 cut(s) | 111 |
| HinfI | GANTC | 2 cut(s) | 25, 85 |
| Hpy166II | GTNNAC | 2 cut(s) | 111, 122 |
| Hpy8I | GTNNAC | 2 cut(s) | 111, 122 |
| Hpy99I | CGWCG | 1 cut(s) | 133 |
| HpyAV | CCTTC | 1 cut(s) | 153 |
| HpyCH4IV | ACGT | 1 cut(s) | 113 |
| HpyCH4V | TGCA | 1 cut(s) | 74 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| HpyF3I | CTNAG | 2 cut(s) | 77, 104 |
| HpySE526I | ACGT | 1 cut(s) | 113 |
| Hsp92II | CATG | 1 cut(s) | 167 |
| HspAI | GCGC | 1 cut(s) | 53 |
| Kzo9I | GATC | 1 cut(s) | 57 |
| Lsp1109I | GCAGC | 1 cut(s) | 147 |
| MaeII | ACGT | 1 cut(s) | 113 |
| MalI | GATC | 1 cut(s) | 59 |
| MboI | GATC | 1 cut(s) | 57 |
| MlyI | GAGTC | 1 cut(s) | 19 |
| MseI | TTAA | 2 cut(s) | 116, 169 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NdeII | GATC | 1 cut(s) | 57 |
| NlaIII | CATG | 1 cut(s) | 167 |
| NspI | RCATGY | 1 cut(s) | 167 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PkrI | GCNGC | 2 cut(s) | 52, 137 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SaqAI | TTAA | 2 cut(s) | 116, 169 |
| SatI | GCNGC | 2 cut(s) | 51, 136 |
| Sau3AI | GATC | 1 cut(s) | 57 |
| SchI | GAGTC | 1 cut(s) | 19 |
| SetI | ASST | 4 cut(s) | 15, 83, 110, 116 |
| SgeI | CNNG | 5 cut(s) | 31, 137, 144, 158, 164 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| SsiI | CCGC | 1 cut(s) | 50 |
| TaiI | ACGT | 1 cut(s) | 116 |
| TauI | GCSGC | 1 cut(s) | 53 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| Tru1I | TTAA | 2 cut(s) | 116, 169 |
| Tru9I | TTAA | 2 cut(s) | 116, 169 |
| TseI | GCWGC | 1 cut(s) | 135 |
| TspGWI | ACGGA | 1 cut(s) | 50 |
| XceI | RCATGY | 1 cut(s) | 167 |