RchiOBHm_Chr2g0155041

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
72061260 .. 72061996
737 bp
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UTR
Exon/CDS
Intron
PRQ52396

Sequence Viewer

Length: 165 bp
ATGGTCAAGATGGACCAAAGTGGTGTTATGGGGGTTGGGTGCTGTAGGACCAGTGTGGTGTACTGTGATTTGATGATTGTGAAAATGTATTCCTTGTGGTTTTTCATGAGTGGTTTGATGTCTCTTTGCAGACGTATTACTGTTGGATTTTTACTTGATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

6.14

Weight (kDa)

8.47

Isoelectric Point (pI)

62.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019355)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 62
Alw26I GTCTC 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 13, 48
AvaII GGWCC 2 cut(s) 13, 48
BccI CCATC 1 cut(s) 4
BcoDI GTCTC 1 cut(s) 126
BfmI CTRYAG 1 cut(s) 43
Bme18I GGWCC 2 cut(s) 13, 48
BmgT120I GGNCC 2 cut(s) 13, 48
Bse1I ACTGG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 51
BsmAI GTCTC 1 cut(s) 126
BspHI TCATGA 1 cut(s) 105
BsrI ACTGG 1 cut(s) 51
Bst4CI ACNGT 2 cut(s) 65, 142
BstMAI GTCTC 1 cut(s) 126
BstSFI CTRYAG 1 cut(s) 43
BtsIMutI CAGTG 1 cut(s) 58
CciI TCATGA 1 cut(s) 105
Cfr13I GGNCC 2 cut(s) 13, 48
Csp6I GTAC 1 cut(s) 61
CviAII CATG 1 cut(s) 106
CviQI GTAC 1 cut(s) 61
Eco47I GGWCC 2 cut(s) 13, 48
FaeI CATG 1 cut(s) 109
FaiI YATR 2 cut(s) 29, 107
FatI CATG 1 cut(s) 105
Hin1II CATG 1 cut(s) 109
Hpy166II GTNNAC 1 cut(s) 61
Hpy188III TCNNGA 2 cut(s) 7, 106
Hpy8I GTNNAC 1 cut(s) 61
HpyCH4III ACNGT 2 cut(s) 65, 142
HpyCH4IV ACGT 1 cut(s) 133
HpyCH4V TGCA 1 cut(s) 129
HpySE526I ACGT 1 cut(s) 133
Hsp92II CATG 1 cut(s) 109
LpnPI CCDG 1 cut(s) 64
MaeII ACGT 1 cut(s) 133
MmeI TCCRAC 1 cut(s) 124
NlaIII CATG 1 cut(s) 109
PagI TCATGA 1 cut(s) 105
PspPI GGNCC 2 cut(s) 13, 48
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
Sau96I GGNCC 2 cut(s) 13, 48
SetI ASST 1 cut(s) 136
SfcI CTRYAG 1 cut(s) 43
SgeI CNNG 4 cut(s) 19, 63, 106, 118
SinI GGWCC 2 cut(s) 13, 48
TaaI ACNGT 2 cut(s) 65, 142
TaiI ACGT 1 cut(s) 136
TatI WGTACW 1 cut(s) 60
TscAI CASTG 1 cut(s) 58
TspDTI ATGAA 1 cut(s) 94
TspRI CASTG 1 cut(s) 58
VpaK11BI GGWCC 2 cut(s) 13, 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.