Rmu_sc0032631.1_g000002

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032631.1
OG0019355
Physical Location & Seq
Reverse (-)
6698 .. 7538
841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032631.1_g000002.1.cds

Sequence Viewer

Length: 525 bp
atgacgtttgatgcaatgtgctgcatgctaatgagtatcacggatgagcccttgctaaggcagcttgacaaagactgcattgcagtctcgaatggactgatatctgttcctgtcttgattccaggcactagatattacaaaggcatcaaggcacgcagacgtcttttggaaacctttaaagacatgattgccaaaagacggagtgggaaggagtggccagaaccagaagatttcctacagtccatgttacgaagagattcataccctcccaatgaaaagctgcaagactcggaaatcatggacaacctaatgacacttctgatttcagggcaaatcagctcttcagctgcaatgatgtggagtgtcaagtttctggatgagaaccaacaagtccaagacaaacttagggtaagcctccgtctcaggcagtcaggcctatctacatgtccgccattggttaaagggattagtttttctaacccacatgaacatctagtagatgtttacttattatatcagttataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
p450

Protein Analysis

174

Amino Acids

19.99

Weight (kDa)

7.65

Isoelectric Point (pI)

60.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019355)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0155041
rosa_multiflora Rmu_sc0002263.1_g000022 Rmu_sc0032631.1_g000002
rosa_roxburghii Rroxscaffold_3G00220030 Rroxscaffold_6G00423150 Rroxscaffold_6G00423790
rosa_samantha Rh4CG121300 Rh5BG085100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 523
AatII GACGTC 1 cut(s) 163
AciI CCGC 1 cut(s) 449
AcoI YGGCCR 1 cut(s) 215
AcuI CTGAAG 1 cut(s) 327
AcyI GRCGYC 1 cut(s) 160
AfiI CCNNNNNNNGG 2 cut(s) 57, 198
AflIII ACRYGT 1 cut(s) 443
AjnI CCWGG 1 cut(s) 121
AluBI AGCT 4 cut(s) 64, 280, 339, 347
AluI AGCT 4 cut(s) 64, 280, 339, 347
Alw26I GTCTC 2 cut(s) 91, 425
AoxI GGCC 2 cut(s) 215, 433
ApeKI GCWGC 4 cut(s) 21, 61, 280, 347
Asp700I GAANNNNTTC 1 cut(s) 256
BalI TGGCCA 1 cut(s) 217
BanII GRGCYC 1 cut(s) 51
BarI GAAGNNNNNNTAC 2 cut(s) 219, 251
BbvI GCAGC 4 cut(s) 8, 73, 267, 334
BciT130I CCWGG 1 cut(s) 123
BcoDI GTCTC 2 cut(s) 91, 425
BfaI CTAG 2 cut(s) 129, 494
BfmI CTRYAG 1 cut(s) 236
BisI GCNGC 4 cut(s) 22, 62, 281, 348
BlsI GCNGC 4 cut(s) 23, 63, 282, 349
Bme1390I CCNGG 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 123
BmsI GCATC 1 cut(s) 153
Bpu10I CCTNAGC 1 cut(s) 56
BsaHI GRCGYC 1 cut(s) 160
Bsc4I CCNNNNNNNGG 2 cut(s) 57, 198
Bse3DI GCAATG 3 cut(s) 21, 78, 357
BseBI CCWGG 1 cut(s) 123
BseGI GGATG 2 cut(s) 49, 382
BseLI CCNNNNNNNGG 2 cut(s) 57, 198
BseMI GCAATG 3 cut(s) 21, 78, 357
BseMII CTCAG 1 cut(s) 436
BseXI GCAGC 4 cut(s) 8, 73, 267, 334
BshFI GGCC 2 cut(s) 217, 435
BslI CCNNNNNNNGG 2 cut(s) 57, 198
BsmAI GTCTC 2 cut(s) 91, 425
BsmBI CGTCTC 1 cut(s) 425
BsnI GGCC 2 cut(s) 217, 435
Bsp1286I GDGCHC 1 cut(s) 51
BspACI CCGC 1 cut(s) 449
BspANI GGCC 2 cut(s) 217, 435
BspCNI CTCAG 1 cut(s) 435
BspQI GCTCTTC 1 cut(s) 346
BsrDI GCAATG 3 cut(s) 21, 78, 357
BssNI GRCGYC 1 cut(s) 160
Bst2UI CCWGG 1 cut(s) 123
Bst4CI ACNGT 1 cut(s) 240
Bst6I CTCTTC 2 cut(s) 247, 346
BstACI GRCGYC 1 cut(s) 160
BstC8I GCNNGC 2 cut(s) 26, 154
BstDEI CTNAG 3 cut(s) 56, 404, 422
BstENI CCTNNNNNAGG 1 cut(s) 55
BstF5I GGATG 2 cut(s) 49, 382
BstMAI GTCTC 2 cut(s) 91, 425
BstMWI GCNNNNNNNGC 1 cut(s) 61
BstNI CCWGG 1 cut(s) 123
BstNSI RCATGY 2 cut(s) 28, 447
BstSCI CCNGG 1 cut(s) 121
BstSFI CTRYAG 1 cut(s) 236
BstV1I GCAGC 4 cut(s) 8, 73, 267, 334
BsuRI GGCC 2 cut(s) 217, 435
BtsCI GGATG 2 cut(s) 49, 382
Cac8I GCNNGC 2 cut(s) 26, 154
CviAII CATG 6 cut(s) 25, 184, 244, 298, 444, 485
CviJI RGCY 8 cut(s) 49, 64, 217, 280, 339, 347, 414, 435
CviKI_1 RGCY 8 cut(s) 49, 64, 217, 280, 339, 347, 414, 435
DdeI CTNAG 3 cut(s) 56, 404, 422
DraI TTTAAA 1 cut(s) 178
EaeI YGGCCR 1 cut(s) 215
Eam1104I CTCTTC 2 cut(s) 247, 346
EarI CTCTTC 2 cut(s) 247, 346
EciI GGCGGA 1 cut(s) 438
Eco147I AGGCCT 1 cut(s) 435
Eco24I GRGCYC 1 cut(s) 51
Eco32I GATATC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 327
EcoNI CCTNNNNNAGG 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 121
EcoRV GATATC 1 cut(s) 102
EcoT38I GRGCYC 1 cut(s) 51
Esp3I CGTCTC 1 cut(s) 425
FaeI CATG 6 cut(s) 28, 187, 247, 301, 447, 488
FaiI YATR 9 cut(s) 26, 185, 245, 262, 299, 445, 486, 514, 523
FalI AAGNNNNNCTT 2 cut(s) 387, 419
FatI CATG 6 cut(s) 24, 183, 243, 297, 443, 484
Fnu4HI GCNGC 4 cut(s) 22, 62, 281, 348
FokI GGATG 2 cut(s) 56, 389
FriOI GRGCYC 1 cut(s) 51
Fsp4HI GCNGC 4 cut(s) 22, 62, 281, 348
FspBI CTAG 2 cut(s) 129, 494
GluI GCNGC 4 cut(s) 22, 62, 281, 348
HaeIII GGCC 2 cut(s) 217, 435
Hin1I GRCGYC 1 cut(s) 160
Hin1II CATG 6 cut(s) 28, 187, 247, 301, 447, 488
HinfI GANTC 3 cut(s) 118, 257, 287
Hpy166II GTNNAC 1 cut(s) 505
Hpy188I TCNGA 2 cut(s) 292, 321
Hpy188III TCNNGA 3 cut(s) 88, 115, 374
Hpy8I GTNNAC 1 cut(s) 505
HpyAV CCTTC 1 cut(s) 202
HpyCH4III ACNGT 1 cut(s) 240
HpyCH4IV ACGT 2 cut(s) 5, 160
HpyCH4V TGCA 6 cut(s) 14, 24, 78, 83, 283, 350
HpyF10VI GCNNNNNNNGC 1 cut(s) 61
HpyF3I CTNAG 3 cut(s) 56, 404, 422
HpySE526I ACGT 2 cut(s) 5, 160
Hsp92I GRCGYC 1 cut(s) 160
Hsp92II CATG 6 cut(s) 28, 187, 247, 301, 447, 488
LguI GCTCTTC 1 cut(s) 346
LpnPI CCDG 9 cut(s) 108, 123, 135, 231, 237, 312, 359, 409, 417
Lsp1109I GCAGC 4 cut(s) 8, 73, 267, 334
LweI GCATC 1 cut(s) 153
MaeI CTAG 2 cut(s) 129, 494
MaeII ACGT 2 cut(s) 5, 160
MaeIII GTNAC 1 cut(s) 246
MboII GAAGA 3 cut(s) 239, 264, 333
MhlI GDGCHC 1 cut(s) 51
MlsI TGGCCA 1 cut(s) 217
MluNI TGGCCA 1 cut(s) 217
MlyI GAGTC 1 cut(s) 281
MnlI CCTC 2 cut(s) 276, 425
Mox20I TGGCCA 1 cut(s) 217
MroXI GAANNNNTTC 1 cut(s) 256
MscI TGGCCA 1 cut(s) 217
MseI TTAA 2 cut(s) 177, 459
MslI CAYNNNNRTG 1 cut(s) 29
Msp20I TGGCCA 1 cut(s) 217
MspA1I CMGCKG 1 cut(s) 347
MspR9I CCNGG 1 cut(s) 123
MvaI CCWGG 1 cut(s) 123
MwoI GCNNNNNNNGC 1 cut(s) 61
NlaIII CATG 6 cut(s) 28, 187, 247, 301, 447, 488
NspI RCATGY 2 cut(s) 28, 447
PaeI GCATGC 1 cut(s) 28
PceI AGGCCT 1 cut(s) 435
PciI ACATGT 1 cut(s) 443
PciSI GCTCTTC 1 cut(s) 346
PdmI GAANNNNTTC 1 cut(s) 256
PfeI GAWTC 2 cut(s) 118, 257
PkrI GCNGC 4 cut(s) 23, 63, 282, 349
PleI GAGTC 1 cut(s) 281
PpsI GAGTC 1 cut(s) 281
PscI ACATGT 1 cut(s) 443
PsiI TTATAA 1 cut(s) 523
Psp6I CCWGG 1 cut(s) 121
PspGI CCWGG 1 cut(s) 121
PvuII CAGCTG 1 cut(s) 347
RseI CAYNNNNRTG 1 cut(s) 29
SapI GCTCTTC 1 cut(s) 346
SaqAI TTAA 2 cut(s) 177, 459
SatI GCNGC 4 cut(s) 22, 62, 281, 348
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 1 cut(s) 123
SduI GDGCHC 1 cut(s) 51
SetI ASST 8 cut(s) 8, 66, 163, 176, 282, 309, 341, 349
SfaNI GCATC 1 cut(s) 153
SfcI CTRYAG 1 cut(s) 236
SmiMI CAYNNNNRTG 1 cut(s) 29
SphI GCATGC 1 cut(s) 28
SseBI AGGCCT 1 cut(s) 435
SsiI CCGC 1 cut(s) 449
SspMI CTAG 2 cut(s) 129, 494
StuI AGGCCT 1 cut(s) 435
StyD4I CCNGG 1 cut(s) 121
TaaI ACNGT 1 cut(s) 240
TaiI ACGT 2 cut(s) 8, 163
TaqI TCGA 1 cut(s) 89
TfiI GAWTC 2 cut(s) 118, 257
Tru1I TTAA 2 cut(s) 177, 459
Tru9I TTAA 2 cut(s) 177, 459
TseI GCWGC 4 cut(s) 21, 61, 280, 347
TspDTI ATGAA 3 cut(s) 249, 288, 501
TspGWI ACGGA 3 cut(s) 56, 214, 407
XagI CCTNNNNNAGG 1 cut(s) 55
XceI RCATGY 2 cut(s) 28, 447
XmnI GAANNNNTTC 1 cut(s) 256
XspI CTAG 2 cut(s) 129, 494
ZraI GACGTC 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.