Rh4CG121300

Integral membrane Yip1 family protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
23335987 .. 23336295
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG121300.1

Sequence Viewer

Length: 309 bp
ATGAGATTGTTCTCCCATAAAATAAGAAGCTTAACAAAGTTGTCTTTTTCAGGGGGGACACATAATTTTCTTTCAGAGCCTAAGTCTTCTTGGTTATTGCTTGTTCCCTCTGGATGTTGGAGCTTTAATCTGTATGGTGAAGGACAATGTGATATTGAAGGTGGTTGTAGTAAGCATTACACTGGCTTGGAGTTCTTGGTCTGCATATCCTTTCATGAGTTCAGCAGTCAACCCCAGGAGAAAAGCTCTCGCACTTTACCCAGTTTTCTTGCTGTATGTATCTGTTGGTTTTCTTATCATCGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

11.64

Weight (kDa)

8.27

Isoelectric Point (pI)

58.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019355)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 158
AjnI CCWGG 1 cut(s) 234
AluBI AGCT 3 cut(s) 30, 123, 246
AluI AGCT 3 cut(s) 30, 123, 246
AsuHPI GGTGA 1 cut(s) 149
BbsI GAAGAC 1 cut(s) 78
BciT130I CCWGG 1 cut(s) 236
Bme1390I CCNGG 1 cut(s) 236
BmrFI CCNGG 1 cut(s) 236
BmrI ACTGGG 1 cut(s) 255
BmuI ACTGGG 1 cut(s) 255
BpiI GAAGAC 1 cut(s) 78
BplI GAGNNNNNCTC 2 cut(s) 230, 262
BsaJI CCNNGG 1 cut(s) 234
Bse1I ACTGG 2 cut(s) 187, 261
BseBI CCWGG 1 cut(s) 236
BseDI CCNNGG 1 cut(s) 234
BseGI GGATG 1 cut(s) 119
BseNI ACTGG 2 cut(s) 187, 261
BslFI GGGAC 1 cut(s) 70
BsmFI GGGAC 1 cut(s) 70
BspHI TCATGA 1 cut(s) 214
BsrI ACTGG 2 cut(s) 187, 261
BssECI CCNNGG 1 cut(s) 234
Bst2UI CCWGG 1 cut(s) 236
BstDEI CTNAG 1 cut(s) 81
BstF5I GGATG 1 cut(s) 119
BstNI CCWGG 1 cut(s) 236
BstSCI CCNGG 1 cut(s) 234
BstV2I GAAGAC 1 cut(s) 78
BtgZI GCGATG 1 cut(s) 284
BtsCI GGATG 1 cut(s) 119
BtsIMutI CAGTG 1 cut(s) 180
CciI TCATGA 1 cut(s) 214
CviAII CATG 1 cut(s) 215
CviJI RGCY 5 cut(s) 30, 79, 123, 186, 246
CviKI_1 RGCY 5 cut(s) 30, 79, 123, 186, 246
DdeI CTNAG 1 cut(s) 81
EcoRII CCWGG 1 cut(s) 234
FaeI CATG 1 cut(s) 218
FaiI YATR 6 cut(s) 18, 63, 135, 206, 216, 277
FaqI GGGAC 1 cut(s) 70
FatI CATG 1 cut(s) 214
FokI GGATG 1 cut(s) 126
Hin1II CATG 1 cut(s) 218
HincII GTYRAC 1 cut(s) 230
HindII GTYRAC 1 cut(s) 230
HindIII AAGCTT 1 cut(s) 28
HphI GGTGA 1 cut(s) 149
Hpy166II GTNNAC 1 cut(s) 230
Hpy188I TCNGA 1 cut(s) 76
Hpy188III TCNNGA 2 cut(s) 111, 215
Hpy8I GTNNAC 1 cut(s) 230
HpyAV CCTTC 2 cut(s) 134, 152
HpyCH4V TGCA 1 cut(s) 204
HpyF3I CTNAG 1 cut(s) 81
Hsp92II CATG 1 cut(s) 218
LmnI GCTCC 1 cut(s) 120
LpnPI CCDG 6 cut(s) 36, 96, 168, 221, 248, 274
MboII GAAGA 1 cut(s) 78
MluCI AATT 1 cut(s) 64
MmeI TCCRAC 1 cut(s) 98
MnlI CCTC 1 cut(s) 118
MseI TTAA 2 cut(s) 32, 126
MspR9I CCNGG 1 cut(s) 236
MvaI CCWGG 1 cut(s) 236
NlaIII CATG 1 cut(s) 218
PagI TCATGA 1 cut(s) 214
Psp6I CCWGG 1 cut(s) 234
PspGI CCWGG 1 cut(s) 234
SaqAI TTAA 2 cut(s) 32, 126
ScrFI CCNGG 1 cut(s) 236
SetI ASST 4 cut(s) 32, 125, 163, 248
Sse9I AATT 1 cut(s) 64
StyD4I CCNGG 1 cut(s) 234
TasI AATT 1 cut(s) 64
Tru1I TTAA 2 cut(s) 32, 126
Tru9I TTAA 2 cut(s) 32, 126
TscAI CASTG 1 cut(s) 187
TspDTI ATGAA 1 cut(s) 203
TspRI CASTG 1 cut(s) 187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.