DDE superfamily endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0145511 RchiOBHm_Chr2g0162641 RchiOBHm_Chr4g0406001 RchiOBHm_Chr5g0009581 RchiOBHm_Chr7g0231491 RchiOBHm_Chr7g0242041 |
| rosa_roxburghii | Rroxscaffold_3G00224770 Rroxscaffold_3G00239460 Rroxscaffold_3G00254770 Rroxscaffold_5G00363820 |
| rosa_samantha | Rh2AG173700 Rh2BG181300 Rh2DG179900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 154 |
| Alw21I | GWGCWC | 1 cut(s) | 103 |
| Alw44I | GTGCAC | 1 cut(s) | 99 |
| ApaLI | GTGCAC | 1 cut(s) | 99 |
| AspLEI | GCGC | 1 cut(s) | 154 |
| AsuHPI | GGTGA | 2 cut(s) | 32, 47 |
| BaeGI | GKGCMC | 1 cut(s) | 103 |
| Bbv12I | GWGCWC | 1 cut(s) | 103 |
| BccI | CCATC | 2 cut(s) | 32, 55 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseSI | GKGCMC | 1 cut(s) | 103 |
| Bsh1236I | CGCG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 103 |
| Bsp1286I | GDGCHC | 1 cut(s) | 103 |
| BspFNI | CGCG | 1 cut(s) | 154 |
| Bst4CI | ACNGT | 1 cut(s) | 20 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstFNI | CGCG | 1 cut(s) | 154 |
| BstHHI | GCGC | 1 cut(s) | 154 |
| BstSLI | GKGCMC | 1 cut(s) | 103 |
| BstUI | CGCG | 1 cut(s) | 154 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| CfoI | GCGC | 1 cut(s) | 154 |
| CviAII | CATG | 2 cut(s) | 89, 95 |
| FaeI | CATG | 2 cut(s) | 92, 98 |
| FaiI | YATR | 2 cut(s) | 90, 96 |
| FatI | CATG | 2 cut(s) | 88, 94 |
| FokI | GGATG | 1 cut(s) | 77 |
| GlaI | GCGC | 1 cut(s) | 153 |
| HhaI | GCGC | 1 cut(s) | 154 |
| Hin1II | CATG | 2 cut(s) | 92, 98 |
| Hin6I | GCGC | 1 cut(s) | 152 |
| HinP1I | GCGC | 1 cut(s) | 152 |
| HphI | GGTGA | 2 cut(s) | 32, 47 |
| Hpy166II | GTNNAC | 2 cut(s) | 101, 166 |
| Hpy8I | GTNNAC | 2 cut(s) | 101, 166 |
| HpyAV | CCTTC | 1 cut(s) | 26 |
| HpyCH4III | ACNGT | 1 cut(s) | 20 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 101 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| Hsp92II | CATG | 2 cut(s) | 92, 98 |
| HspAI | GCGC | 1 cut(s) | 152 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MboII | GAAGA | 3 cut(s) | 35, 89, 92 |
| MhlI | GDGCHC | 1 cut(s) | 103 |
| MluCI | AATT | 1 cut(s) | 10 |
| MseI | TTAA | 1 cut(s) | 44 |
| MslI | CAYNNNNRTG | 1 cut(s) | 93 |
| MvnI | CGCG | 1 cut(s) | 154 |
| NlaIII | CATG | 2 cut(s) | 92, 98 |
| RseI | CAYNNNNRTG | 1 cut(s) | 93 |
| SaqAI | TTAA | 1 cut(s) | 44 |
| SduI | GDGCHC | 1 cut(s) | 103 |
| SetI | ASST | 2 cut(s) | 37, 165 |
| SgeI | CNNG | 6 cut(s) | 29, 62, 101, 107, 116, 165 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 93 |
| Sse9I | AATT | 1 cut(s) | 10 |
| TaaI | ACNGT | 1 cut(s) | 20 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TasI | AATT | 1 cut(s) | 10 |
| Tru1I | TTAA | 1 cut(s) | 44 |
| Tru9I | TTAA | 1 cut(s) | 44 |
| VneI | GTGCAC | 1 cut(s) | 99 |