DDE superfamily endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0145511 RchiOBHm_Chr2g0162641 RchiOBHm_Chr4g0406001 RchiOBHm_Chr5g0009581 RchiOBHm_Chr7g0231491 RchiOBHm_Chr7g0242041 |
| rosa_roxburghii | Rroxscaffold_3G00224770 Rroxscaffold_3G00239460 Rroxscaffold_3G00254770 Rroxscaffold_5G00363820 |
| rosa_samantha | Rh2AG173700 Rh2BG181300 Rh2DG179900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 240 |
| Alw26I | GTCTC | 1 cut(s) | 67 |
| AspLEI | GCGC | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 2 cut(s) | 119, 134 |
| BccI | CCATC | 2 cut(s) | 119, 142 |
| BcoDI | GTCTC | 1 cut(s) | 67 |
| Bse3DI | GCAATG | 1 cut(s) | 39 |
| BseGI | GGATG | 1 cut(s) | 157 |
| BseMI | GCAATG | 1 cut(s) | 39 |
| BsgI | GTGCAG | 1 cut(s) | 207 |
| BsmAI | GTCTC | 1 cut(s) | 67 |
| BspHI | TCATGA | 1 cut(s) | 85 |
| BsrDI | GCAATG | 1 cut(s) | 39 |
| Bst4CI | ACNGT | 1 cut(s) | 107 |
| BstF5I | GGATG | 1 cut(s) | 157 |
| BstHHI | GCGC | 1 cut(s) | 241 |
| BstMAI | GTCTC | 1 cut(s) | 67 |
| BstNSI | RCATGY | 1 cut(s) | 80 |
| BtsCI | GGATG | 1 cut(s) | 157 |
| CciI | TCATGA | 1 cut(s) | 85 |
| CfoI | GCGC | 1 cut(s) | 241 |
| CviAII | CATG | 6 cut(s) | 49, 77, 86, 137, 176, 182 |
| FaeI | CATG | 6 cut(s) | 52, 80, 89, 140, 179, 185 |
| FatI | CATG | 6 cut(s) | 48, 76, 85, 136, 175, 181 |
| FokI | GGATG | 1 cut(s) | 164 |
| FspAI | RTGCGCAY | 1 cut(s) | 240 |
| FspI | TGCGCA | 1 cut(s) | 240 |
| GlaI | GCGC | 1 cut(s) | 240 |
| HhaI | GCGC | 1 cut(s) | 241 |
| Hin1II | CATG | 6 cut(s) | 52, 80, 89, 140, 179, 185 |
| Hin6I | GCGC | 1 cut(s) | 239 |
| HinP1I | GCGC | 1 cut(s) | 239 |
| HphI | GGTGA | 2 cut(s) | 119, 134 |
| Hpy166II | GTNNAC | 1 cut(s) | 103 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| Hpy8I | GTNNAC | 1 cut(s) | 103 |
| HpyAV | CCTTC | 1 cut(s) | 113 |
| HpyCH4III | ACNGT | 1 cut(s) | 107 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 80, 188 |
| Hsp92II | CATG | 6 cut(s) | 52, 80, 89, 140, 179, 185 |
| HspAI | GCGC | 1 cut(s) | 239 |
| MboII | GAAGA | 5 cut(s) | 43, 122, 176, 179, 203 |
| MluCI | AATT | 1 cut(s) | 61 |
| MseI | TTAA | 1 cut(s) | 259 |
| MslI | CAYNNNNRTG | 1 cut(s) | 180 |
| NlaIII | CATG | 6 cut(s) | 52, 80, 89, 140, 179, 185 |
| NsbI | TGCGCA | 1 cut(s) | 240 |
| NspI | RCATGY | 1 cut(s) | 80 |
| PagI | TCATGA | 1 cut(s) | 85 |
| RseI | CAYNNNNRTG | 1 cut(s) | 180 |
| SaqAI | TTAA | 1 cut(s) | 259 |
| SetI | ASST | 2 cut(s) | 10, 124 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 180 |
| Sse9I | AATT | 1 cut(s) | 61 |
| TaaI | ACNGT | 1 cut(s) | 107 |
| TasI | AATT | 1 cut(s) | 61 |
| Tru1I | TTAA | 1 cut(s) | 259 |
| Tru9I | TTAA | 1 cut(s) | 259 |
| TspDTI | ATGAA | 1 cut(s) | 47 |
| TspGWI | ACGGA | 1 cut(s) | 85 |
| XceI | RCATGY | 1 cut(s) | 80 |