RchiOBHm_Chr3g0484841

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
31321786 .. 31323603
1818 bp
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UTR
Exon/CDS
Intron
PRQ44953

Sequence Viewer

Length: 315 bp
ATGAAAAAGGAGCAGTACCATTTTCTGTATATAAGTTTATTGAAAAGAAGTAACAAAACATGCTTCCTTTACTTCATTTCAGCAGAAAAACTGAGCCGCAGCTACAAGGAAAATCTGGAATTACCATTGTTTGACTTGGCTACTATTGTAAATGTTACCTGTAACTTCTCAAATGACAATAAACTAGGAGAAGGTGACTCCAGATCTGTCTTTAAGATAGATCAAAAAGCATGTTACTGGATTGGCCTAAGCGCTTTGACATTATTAATGGCATTGCTCGGGAGCTTCTCTATCTTCATCAAGATTCTTGACTGA

Protein Analysis

104

Amino Acids

11.99

Weight (kDa)

8.79

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 97
AfaI GTAC 1 cut(s) 17
AfeI AGCGCT 1 cut(s) 253
AgsI TTSAA 1 cut(s) 43
AluBI AGCT 2 cut(s) 102, 285
AluI AGCT 2 cut(s) 102, 285
Ama87I CYCGRG 1 cut(s) 278
Aor51HI AGCGCT 1 cut(s) 253
AoxI GGCC 1 cut(s) 244
ApeKI GCWGC 1 cut(s) 99
AseI ATTAAT 1 cut(s) 266
AspLEI GCGC 1 cut(s) 254
AsuHPI GGTGA 1 cut(s) 206
AvaI CYCGRG 1 cut(s) 278
BbvI GCAGC 1 cut(s) 111
BfaI CTAG 1 cut(s) 185
BfoI RGCGCY 1 cut(s) 255
BglII AGATCT 1 cut(s) 203
BisI GCNGC 2 cut(s) 97, 100
BlsI GCNGC 2 cut(s) 98, 101
BmeT110I CYCGRG 1 cut(s) 278
BpmI CTGGAG 1 cut(s) 184
Bpu10I CCTNAGC 1 cut(s) 248
Bse1I ACTGG 1 cut(s) 242
Bse3DI GCAATG 1 cut(s) 272
BseMI GCAATG 1 cut(s) 272
BseMII CTCAG 1 cut(s) 83
BseNI ACTGG 1 cut(s) 242
BseXI GCAGC 1 cut(s) 111
BshFI GGCC 1 cut(s) 246
BsiHKCI CYCGRG 1 cut(s) 278
BsnI GGCC 1 cut(s) 246
BsoBI CYCGRG 1 cut(s) 278
Bsp143I GATC 2 cut(s) 203, 220
BspACI CCGC 1 cut(s) 97
BspANI GGCC 1 cut(s) 246
BspCNI CTCAG 1 cut(s) 84
BsrDI GCAATG 1 cut(s) 272
BsrI ACTGG 1 cut(s) 242
BssMI GATC 2 cut(s) 203, 220
BstDEI CTNAG 2 cut(s) 92, 248
BstH2I RGCGCY 1 cut(s) 255
BstHHI GCGC 1 cut(s) 254
BstKTI GATC 2 cut(s) 206, 223
BstMBI GATC 2 cut(s) 203, 220
BstNSI RCATGY 2 cut(s) 63, 234
BstV1I GCAGC 1 cut(s) 111
BstX2I RGATCY 1 cut(s) 203
BstYI RGATCY 1 cut(s) 203
BsuRI GGCC 1 cut(s) 246
CfoI GCGC 1 cut(s) 254
Csp6I GTAC 1 cut(s) 16
CviAII CATG 2 cut(s) 60, 231
CviJI RGCY 5 cut(s) 96, 102, 140, 246, 285
CviKI_1 RGCY 5 cut(s) 96, 102, 140, 246, 285
CviQI GTAC 1 cut(s) 16
DdeI CTNAG 2 cut(s) 92, 248
DpnI GATC 2 cut(s) 205, 222
DpnII GATC 2 cut(s) 203, 220
Eco47III AGCGCT 1 cut(s) 253
Eco88I CYCGRG 1 cut(s) 278
FaeI CATG 2 cut(s) 63, 234
FaiI YATR 4 cut(s) 30, 32, 61, 232
FatI CATG 2 cut(s) 59, 230
Fnu4HI GCNGC 2 cut(s) 97, 100
Fsp4HI GCNGC 2 cut(s) 97, 100
FspBI CTAG 1 cut(s) 185
GlaI GCGC 1 cut(s) 253
GluI GCNGC 2 cut(s) 97, 100
GsuI CTGGAG 1 cut(s) 184
HaeII RGCGCY 1 cut(s) 255
HaeIII GGCC 1 cut(s) 246
HhaI GCGC 1 cut(s) 254
Hin1II CATG 2 cut(s) 63, 234
Hin6I GCGC 1 cut(s) 252
HinP1I GCGC 1 cut(s) 252
HinfI GANTC 2 cut(s) 197, 304
HphI GGTGA 1 cut(s) 206
Hpy188III TCNNGA 5 cut(s) 116, 201, 280, 301, 308
HpyAV CCTTC 1 cut(s) 185
HpyF3I CTNAG 2 cut(s) 92, 248
Hsp92II CATG 2 cut(s) 63, 234
HspAI GCGC 1 cut(s) 252
Kzo9I GATC 2 cut(s) 203, 220
LmnI GCTCC 2 cut(s) 10, 282
LpnPI CCDG 4 cut(s) 101, 172, 214, 223
Lsp1109I GCAGC 1 cut(s) 111
MaeI CTAG 1 cut(s) 185
MaeIII GTNAC 5 cut(s) 50, 154, 161, 194, 233
MalI GATC 2 cut(s) 205, 222
MboI GATC 2 cut(s) 203, 220
MboII GAAGA 1 cut(s) 286
MflI RGATCY 1 cut(s) 203
MluCI AATT 1 cut(s) 119
MlyI GAGTC 1 cut(s) 191
MseI TTAA 2 cut(s) 213, 266
NdeII GATC 2 cut(s) 203, 220
NlaIII CATG 2 cut(s) 63, 234
NmuCI GTSAC 1 cut(s) 194
NspI RCATGY 2 cut(s) 63, 234
PfeI GAWTC 1 cut(s) 304
PkrI GCNGC 2 cut(s) 98, 101
PleI GAGTC 1 cut(s) 191
PpsI GAGTC 1 cut(s) 191
PshBI ATTAAT 1 cut(s) 266
PsuI RGATCY 1 cut(s) 203
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
SaqAI TTAA 2 cut(s) 213, 266
SatI GCNGC 2 cut(s) 97, 100
Sau3AI GATC 2 cut(s) 203, 220
SchI GAGTC 1 cut(s) 191
SetI ASST 4 cut(s) 104, 161, 196, 287
Sse9I AATT 1 cut(s) 119
SsiI CCGC 1 cut(s) 97
SspMI CTAG 1 cut(s) 185
TasI AATT 1 cut(s) 119
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 1 cut(s) 304
Tru1I TTAA 2 cut(s) 213, 266
Tru9I TTAA 2 cut(s) 213, 266
TseFI GTSAC 1 cut(s) 194
TseI GCWGC 1 cut(s) 99
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 3 cut(s) 17, 64, 286
VspI ATTAAT 1 cut(s) 266
XceI RCATGY 2 cut(s) 63, 234
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.