Rh3CG297100

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0016993
Physical Location & Seq
Reverse (-)
30431722 .. 30455419
23698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG297100.1

Sequence Viewer

Length: 945 bp
ATGAAGAACTGCTCCTGCATAGCCTATGCAAATTCCAATATCGGGAAGGAATTAGCTGCATCAGAGCAAGAGACTACTACCACAATCAATGCTAAACCTGCTAAATCCAATGTGAAGAAAGTGAGAATCATAGTTAGCACTCTTGTTTACCCTACGGGGCAGCTGATACTGGGTGTAGCCCTGCTCGTTCATGTTTGGAAGAAGGATGCAGAAAAACTGACCCGCAGCCACAAGGAAAATCTGGAATTACCATTGTTTGACTTGGCTACTGTTGTAAATGCAACCTGTAACTTCTCAAACGACAATAAACGAGGAGAAGGTGACTCCAGATCTGTCTTTAAGGCATGGAAGCTCTTCACAGAAGGCAGATCCATCGAACTTCTATTGGTAGAGACTCCAGCACCCTACATGAAGTCATGTGATCGATTCATAATAACGTTGATCGTCTCCAAGTATAACATGATTCCTAATATAATTTGGAGATTTAAGAGTTCAATAAATAGGACCTTTGGTTACATTGTTGTGTACATAGTGAAACACAACAGACAACTAATAAGGGAGAGAAATTTGTTGGTCATCGAGGATAAATCAACTCATGGTTCGGTGATATTAAGACTAGGCAAGTCAAAGCACTGTAGTGCAACCACAATGAATGTTAATGATTCAGCTGATTACTCAAAACTTGAAAGAGTATTAAGGTCAAAGAAGAGAAACTTGAGGGCTCGAGAGACATTGAGATCGCCATTTTCACGTGGCAAGTATTTCCACGGATCTGTTCCTATTGGGCCTAGTTTTCAAGCTGAAATTCCTGAATGGACAGTTGATTGGCTTAAGGATGGAAATAAGAACACCGCTTATATCCATCGACGAGCGTCCAATGAGAAGCATCGTAACACTATCCAGGGACATACTGAGTCTGGGCAATGGGTAAGAGTTTTGATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

314

Amino Acids

35.81

Weight (kDa)

9.92

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 106
AciI CCGC 2 cut(s) 223, 852
AclI AACGTT 1 cut(s) 437
AclWI GGATC 2 cut(s) 363, 778
AcsI RAATTY 3 cut(s) 31, 565, 804
AcvI CACGTG 1 cut(s) 752
AfaI GTAC 1 cut(s) 527
AfiI CCNNNNNNNGG 1 cut(s) 42
AflII CTTAAG 1 cut(s) 830
AgsI TTSAA 3 cut(s) 495, 686, 797
AjnI CCWGG 1 cut(s) 900
AleI CACNNNNGTG 1 cut(s) 636
AluBI AGCT 5 cut(s) 56, 163, 352, 668, 800
AluI AGCT 5 cut(s) 56, 163, 352, 668, 800
Alw26I GTCTC 4 cut(s) 65, 386, 451, 722
AlwI GGATC 2 cut(s) 363, 778
Ama87I CYCGRG 1 cut(s) 723
AoxI GGCC 1 cut(s) 785
ApeKI GCWGC 3 cut(s) 56, 160, 225
ApoI RAATTY 3 cut(s) 31, 565, 804
Asp700I GAANNNNTTC 1 cut(s) 353
AspS9I GGNCC 2 cut(s) 504, 785
AsuHPI GGTGA 2 cut(s) 332, 616
AvaI CYCGRG 1 cut(s) 723
AvaII GGWCC 1 cut(s) 504
BanII GRGCYC 1 cut(s) 724
BbrPI CACGTG 1 cut(s) 752
BbvI GCAGC 3 cut(s) 43, 172, 237
BccI CCATC 3 cut(s) 380, 830, 870
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BciT130I CCWGG 1 cut(s) 902
BcoDI GTCTC 4 cut(s) 65, 386, 451, 722
BfaI CTAG 2 cut(s) 617, 789
BfmI CTRYAG 1 cut(s) 634
BfrI CTTAAG 1 cut(s) 830
BfuAI ACCTGC 1 cut(s) 106
BglII AGATCT 1 cut(s) 329
BisI GCNGC 3 cut(s) 57, 161, 226
BlsI GCNGC 3 cut(s) 58, 162, 227
Bme1390I CCNGG 1 cut(s) 902
Bme18I GGWCC 1 cut(s) 504
BmeT110I CYCGRG 1 cut(s) 723
BmgT120I GGNCC 2 cut(s) 504, 785
BmrFI CCNGG 1 cut(s) 902
BmrI ACTGGG 1 cut(s) 179
BmsI GCATC 3 cut(s) 68, 196, 895
BmuI ACTGGG 1 cut(s) 179
BoxI GACNNNNGTC 1 cut(s) 871
BpmI CTGGAG 2 cut(s) 310, 381
BpuEI CTTGAG 1 cut(s) 736
Bsa29I ATCGAT 1 cut(s) 424
BsaAI YACGTR 1 cut(s) 752
BsaJI CCNNGG 2 cut(s) 766, 901
Bsc4I CCNNNNNNNGG 1 cut(s) 42
Bse1I ACTGG 1 cut(s) 174
Bse3DI GCAATG 1 cut(s) 929
BseBI CCWGG 1 cut(s) 902
BseCI ATCGAT 1 cut(s) 424
BseDI CCNNGG 2 cut(s) 766, 901
BseGI GGATG 2 cut(s) 211, 841
BseLI CCNNNNNNNGG 1 cut(s) 42
BseMI GCAATG 1 cut(s) 929
BseMII CTCAG 1 cut(s) 903
BseNI ACTGG 1 cut(s) 174
BseRI GAGGAG 1 cut(s) 327
BseXI GCAGC 3 cut(s) 43, 172, 237
BshFI GGCC 1 cut(s) 787
BshVI ATCGAT 1 cut(s) 424
BsiHKCI CYCGRG 1 cut(s) 723
BslFI GGGAC 1 cut(s) 918
BslI CCNNNNNNNGG 1 cut(s) 42
BsmAI GTCTC 4 cut(s) 65, 386, 451, 722
BsmBI CGTCTC 1 cut(s) 451
BsmFI GGGAC 1 cut(s) 918
BsnI GGCC 1 cut(s) 787
BsoBI CYCGRG 1 cut(s) 723
Bsp1286I GDGCHC 1 cut(s) 724
Bsp1407I TGTACA 1 cut(s) 525
Bsp143I GATC 6 cut(s) 329, 368, 421, 441, 737, 770
BspACI CCGC 2 cut(s) 223, 852
BspANI GGCC 1 cut(s) 787
BspCNI CTCAG 1 cut(s) 904
BspDI ATCGAT 1 cut(s) 424
BspMI ACCTGC 1 cut(s) 106
BspPI GGATC 2 cut(s) 363, 778
BspQI GCTCTTC 1 cut(s) 359
BspTI CTTAAG 1 cut(s) 830
BsrDI GCAATG 1 cut(s) 929
BsrGI TGTACA 1 cut(s) 525
BsrI ACTGG 1 cut(s) 174
BssECI CCNNGG 2 cut(s) 766, 901
BssMI GATC 6 cut(s) 329, 368, 421, 441, 737, 770
Bst2UI CCWGG 1 cut(s) 902
Bst4CI ACNGT 3 cut(s) 271, 635, 820
Bst6I CTCTTC 2 cut(s) 359, 701
BstAFI CTTAAG 1 cut(s) 830
BstAUI TGTACA 1 cut(s) 525
BstBAI YACGTR 1 cut(s) 752
BstDEI CTNAG 1 cut(s) 912
BstDSI CCRYGG 1 cut(s) 766
BstF5I GGATG 2 cut(s) 211, 841
BstKTI GATC 6 cut(s) 332, 371, 424, 444, 740, 773
BstMAI GTCTC 4 cut(s) 65, 386, 451, 722
BstMBI GATC 6 cut(s) 329, 368, 421, 441, 737, 770
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstNI CCWGG 1 cut(s) 902
BstPAI GACNNNNGTC 1 cut(s) 871
BstSCI CCNGG 1 cut(s) 900
BstSFI CTRYAG 1 cut(s) 634
BstV1I GCAGC 3 cut(s) 43, 172, 237
BstX2I RGATCY 3 cut(s) 329, 368, 770
BstYI RGATCY 3 cut(s) 329, 368, 770
Bsu15I ATCGAT 1 cut(s) 424
BsuRI GGCC 1 cut(s) 787
BsuTUI ATCGAT 1 cut(s) 424
BtgI CCRYGG 1 cut(s) 766
BtsCI GGATG 2 cut(s) 211, 841
BtsIMutI CAGTG 1 cut(s) 631
BveI ACCTGC 1 cut(s) 106
Cfr13I GGNCC 2 cut(s) 504, 785
ClaI ATCGAT 1 cut(s) 424
CseI GACGC 1 cut(s) 861
Csp6I GTAC 1 cut(s) 526
CviAII CATG 6 cut(s) 191, 345, 409, 417, 460, 596
CviQI GTAC 1 cut(s) 526
DdeI CTNAG 1 cut(s) 912
DpnI GATC 6 cut(s) 331, 370, 423, 443, 739, 772
DpnII GATC 6 cut(s) 329, 368, 421, 441, 737, 770
Eam1104I CTCTTC 2 cut(s) 359, 701
EarI CTCTTC 2 cut(s) 359, 701
Eco24I GRGCYC 1 cut(s) 724
Eco47I GGWCC 1 cut(s) 504
Eco72I CACGTG 1 cut(s) 752
Eco88I CYCGRG 1 cut(s) 723
EcoO109I RGGNCCY 1 cut(s) 504
EcoRII CCWGG 1 cut(s) 900
EcoT38I GRGCYC 1 cut(s) 724
Esp3I CGTCTC 1 cut(s) 451
FaeI CATG 6 cut(s) 194, 348, 412, 420, 463, 599
FalI AAGNNNNNCTT 2 cut(s) 698, 730
FaqI GGGAC 1 cut(s) 918
FatI CATG 6 cut(s) 190, 344, 408, 416, 459, 595
FauI CCCGC 1 cut(s) 230
Fnu4HI GCNGC 3 cut(s) 57, 161, 226
FokI GGATG 2 cut(s) 218, 848
FriOI GRGCYC 1 cut(s) 724
Fsp4HI GCNGC 3 cut(s) 57, 161, 226
FspBI CTAG 2 cut(s) 617, 789
GluI GCNGC 3 cut(s) 57, 161, 226
GsuI CTGGAG 2 cut(s) 310, 381
HaeIII GGCC 1 cut(s) 787
HgaI GACGC 1 cut(s) 861
Hin1II CATG 6 cut(s) 194, 348, 412, 420, 463, 599
HinfI GANTC 7 cut(s) 126, 323, 394, 426, 463, 662, 914
HphI GGTGA 2 cut(s) 332, 616
Hpy166II GTNNAC 2 cut(s) 148, 526
Hpy188I TCNGA 1 cut(s) 64
Hpy188III TCNNGA 5 cut(s) 43, 242, 327, 725, 809
Hpy8I GTNNAC 2 cut(s) 148, 526
Hpy99I CGWCG 1 cut(s) 870
HpyAV CCTTC 4 cut(s) 40, 196, 311, 356
HpyCH4III ACNGT 3 cut(s) 271, 635, 820
HpyCH4IV ACGT 2 cut(s) 437, 751
HpyCH4V TGCA 6 cut(s) 18, 29, 59, 209, 281, 641
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpyF3I CTNAG 1 cut(s) 912
HpySE526I ACGT 2 cut(s) 437, 751
Hsp92II CATG 6 cut(s) 194, 348, 412, 420, 463, 599
Kzo9I GATC 6 cut(s) 329, 368, 421, 441, 737, 770
LguI GCTCTTC 1 cut(s) 359
LmnI GCTCC 1 cut(s) 17
Lsp1109I GCAGC 3 cut(s) 43, 172, 237
LweI GCATC 3 cut(s) 68, 196, 895
MaeI CTAG 2 cut(s) 617, 789
MaeII ACGT 2 cut(s) 437, 751
MaeIII GTNAC 4 cut(s) 287, 320, 512, 890
MalI GATC 6 cut(s) 331, 370, 423, 443, 739, 772
MboI GATC 6 cut(s) 329, 368, 421, 441, 737, 770
MboII GAAGA 5 cut(s) 16, 127, 211, 346, 718
MflI RGATCY 3 cut(s) 329, 368, 770
MhlI GDGCHC 1 cut(s) 724
MluCI AATT 6 cut(s) 31, 50, 245, 474, 565, 804
MlyI GAGTC 3 cut(s) 317, 388, 923
MnlI CCTC 3 cut(s) 305, 574, 711
MroXI GAANNNNTTC 1 cut(s) 353
MseI TTAA 6 cut(s) 339, 486, 611, 657, 695, 831
MslI CAYNNNNRTG 2 cut(s) 521, 636
MspA1I CMGCKG 2 cut(s) 163, 668
MspCI CTTAAG 1 cut(s) 830
MspR9I CCNGG 1 cut(s) 902
MvaI CCWGG 1 cut(s) 902
MwoI GCNNNNNNNGC 1 cut(s) 98
NdeII GATC 6 cut(s) 329, 368, 421, 441, 737, 770
NlaIII CATG 6 cut(s) 194, 348, 412, 420, 463, 599
NmuCI GTSAC 1 cut(s) 320
OliI CACNNNNGTG 1 cut(s) 636
PaeR7I CTCGAG 1 cut(s) 723
PciSI GCTCTTC 1 cut(s) 359
PdmI GAANNNNTTC 1 cut(s) 353
PfeI GAWTC 4 cut(s) 126, 426, 463, 662
PkrI GCNGC 3 cut(s) 58, 162, 227
PleI GAGTC 3 cut(s) 317, 388, 922
PmaCI CACGTG 1 cut(s) 752
PmlI CACGTG 1 cut(s) 752
PpsI GAGTC 3 cut(s) 317, 388, 922
Ppu21I YACGTR 1 cut(s) 752
PpuMI RGGWCCY 1 cut(s) 504
PshAI GACNNNNGTC 1 cut(s) 871
Psp1406I AACGTT 1 cut(s) 437
Psp5II RGGWCCY 1 cut(s) 504
Psp6I CCWGG 1 cut(s) 900
PspCI CACGTG 1 cut(s) 752
PspGI CCWGG 1 cut(s) 900
PspPI GGNCC 2 cut(s) 504, 785
PspPPI RGGWCCY 1 cut(s) 504
PsuI RGATCY 3 cut(s) 329, 368, 770
PvuII CAGCTG 2 cut(s) 163, 668
RsaI GTAC 1 cut(s) 527
RsaNI GTAC 1 cut(s) 526
RseI CAYNNNNRTG 2 cut(s) 521, 636
SapI GCTCTTC 1 cut(s) 359
SaqAI TTAA 6 cut(s) 339, 486, 611, 657, 695, 831
SatI GCNGC 3 cut(s) 57, 161, 226
Sau3AI GATC 6 cut(s) 329, 368, 421, 441, 737, 770
Sau96I GGNCC 2 cut(s) 504, 785
SchI GAGTC 3 cut(s) 317, 388, 923
ScrFI CCNGG 1 cut(s) 902
SduI GDGCHC 1 cut(s) 724
SfaNI GCATC 3 cut(s) 68, 196, 895
SfcI CTRYAG 1 cut(s) 634
Sfr274I CTCGAG 1 cut(s) 723
SinI GGWCC 1 cut(s) 504
SlaI CTCGAG 1 cut(s) 723
SmiMI CAYNNNNRTG 2 cut(s) 521, 636
SmlI CTYRAG 3 cut(s) 715, 723, 830
SmoI CTYRAG 3 cut(s) 715, 723, 830
Sse9I AATT 6 cut(s) 31, 50, 245, 474, 565, 804
SsiI CCGC 2 cut(s) 223, 852
SspMI CTAG 2 cut(s) 617, 789
StyD4I CCNGG 1 cut(s) 900
TaaI ACNGT 3 cut(s) 271, 635, 820
TaiI ACGT 2 cut(s) 440, 754
TaqI TCGA 5 cut(s) 375, 424, 579, 724, 865
TasI AATT 6 cut(s) 31, 50, 245, 474, 565, 804
TatI WGTACW 1 cut(s) 525
TfiI GAWTC 4 cut(s) 126, 426, 463, 662
Tru1I TTAA 6 cut(s) 339, 486, 611, 657, 695, 831
Tru9I TTAA 6 cut(s) 339, 486, 611, 657, 695, 831
TscAI CASTG 1 cut(s) 638
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 3 cut(s) 56, 160, 225
Tsp45I GTSAC 1 cut(s) 320
TspDTI ATGAA 5 cut(s) 17, 179, 418, 425, 665
TspGWI ACGGA 1 cut(s) 783
TspRI CASTG 1 cut(s) 638
Vha464I CTTAAG 1 cut(s) 830
VpaK11BI GGWCC 1 cut(s) 504
XapI RAATTY 3 cut(s) 31, 565, 804
XhoI CTCGAG 1 cut(s) 723
XmnI GAANNNNTTC 1 cut(s) 353
XspI CTAG 2 cut(s) 617, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.