No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0355661 RchiOBHm_Chr3g0490641 |
| rosa_laevigata | RLG00000002036 RLG00000003840 |
| rosa_multiflora | Rmu_sc0001371.1_g000012 |
| rosa_roxburghii | Rroxscaffold_180G00433290 Rroxscaffold_4G00300050 |
| rosa_samantha | Rh2DG624700 Rh5AG413600 Rh6AG329600 Rh7BG437100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 187 |
| AcyI | GRCGYC | 1 cut(s) | 193 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 94 |
| AgeI | ACCGGT | 1 cut(s) | 74 |
| AhlI | ACTAGT | 1 cut(s) | 40 |
| AluBI | AGCT | 1 cut(s) | 115 |
| AluI | AGCT | 1 cut(s) | 115 |
| Alw26I | GTCTC | 1 cut(s) | 200 |
| AoxI | GGCC | 2 cut(s) | 11, 125 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 140, 172 |
| AsiGI | ACCGGT | 1 cut(s) | 74 |
| AsuHPI | GGTGA | 2 cut(s) | 37, 64 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BcoDI | GTCTC | 1 cut(s) | 200 |
| BcuI | ACTAGT | 1 cut(s) | 40 |
| BfaI | CTAG | 1 cut(s) | 41 |
| BfmI | CTRYAG | 1 cut(s) | 182 |
| BmiI | GGNNCC | 1 cut(s) | 209 |
| BsaHI | GRCGYC | 1 cut(s) | 193 |
| BsaJI | CCNNGG | 1 cut(s) | 88 |
| BsaWI | WCCGGW | 1 cut(s) | 74 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 192, 222 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 94 |
| Bse118I | RCCGGY | 1 cut(s) | 74 |
| BseDI | CCNNGG | 1 cut(s) | 88 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| BshFI | GGCC | 2 cut(s) | 13, 127 |
| BshTI | ACCGGT | 1 cut(s) | 74 |
| BsiSI | CCGG | 1 cut(s) | 75 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 94 |
| BsmAI | GTCTC | 1 cut(s) | 200 |
| BsmBI | CGTCTC | 1 cut(s) | 200 |
| BsnI | GGCC | 2 cut(s) | 13, 127 |
| Bsp143I | GATC | 2 cut(s) | 29, 143 |
| BspACI | CCGC | 1 cut(s) | 187 |
| BspANI | GGCC | 2 cut(s) | 13, 127 |
| BspLI | GGNNCC | 1 cut(s) | 209 |
| BsrFI | RCCGGY | 1 cut(s) | 74 |
| BssAI | RCCGGY | 1 cut(s) | 74 |
| BssECI | CCNNGG | 1 cut(s) | 88 |
| BssMI | GATC | 2 cut(s) | 29, 143 |
| BssNI | GRCGYC | 1 cut(s) | 193 |
| BssT1I | CCWWGG | 1 cut(s) | 88 |
| BstACI | GRCGYC | 1 cut(s) | 193 |
| BstDEI | CTNAG | 1 cut(s) | 8 |
| BstKTI | GATC | 2 cut(s) | 32, 146 |
| BstMAI | GTCTC | 1 cut(s) | 200 |
| BstMBI | GATC | 2 cut(s) | 29, 143 |
| BstSFI | CTRYAG | 1 cut(s) | 182 |
| BsuRI | GGCC | 2 cut(s) | 13, 127 |
| Cfr10I | RCCGGY | 1 cut(s) | 74 |
| CseI | GACGC | 1 cut(s) | 182 |
| CspAI | ACCGGT | 1 cut(s) | 74 |
| CviJI | RGCY | 4 cut(s) | 13, 115, 127, 208 |
| CviKI_1 | RGCY | 4 cut(s) | 13, 115, 127, 208 |
| DdeI | CTNAG | 1 cut(s) | 8 |
| DpnI | GATC | 2 cut(s) | 31, 145 |
| DpnII | GATC | 2 cut(s) | 29, 143 |
| Eco130I | CCWWGG | 1 cut(s) | 88 |
| Eco147I | AGGCCT | 1 cut(s) | 13 |
| EcoT14I | CCWWGG | 1 cut(s) | 88 |
| ErhI | CCWWGG | 1 cut(s) | 88 |
| Esp3I | CGTCTC | 1 cut(s) | 200 |
| FspBI | CTAG | 1 cut(s) | 41 |
| HaeIII | GGCC | 2 cut(s) | 13, 127 |
| HapII | CCGG | 1 cut(s) | 75 |
| HgaI | GACGC | 1 cut(s) | 182 |
| Hin1I | GRCGYC | 1 cut(s) | 193 |
| HpaII | CCGG | 1 cut(s) | 75 |
| HphI | GGTGA | 2 cut(s) | 37, 64 |
| Hpy166II | GTNNAC | 1 cut(s) | 72 |
| Hpy188I | TCNGA | 3 cut(s) | 9, 160, 200 |
| Hpy8I | GTNNAC | 1 cut(s) | 72 |
| Hpy99I | CGWCG | 1 cut(s) | 204 |
| HpyAV | CCTTC | 2 cut(s) | 94, 198 |
| HpyCH4V | TGCA | 1 cut(s) | 140 |
| HpyF3I | CTNAG | 1 cut(s) | 8 |
| Hsp92I | GRCGYC | 1 cut(s) | 193 |
| Kzo9I | GATC | 2 cut(s) | 29, 143 |
| LmnI | GCTCC | 2 cut(s) | 112, 213 |
| LpnPI | CCDG | 4 cut(s) | 8, 73, 88, 150 |
| MaeI | CTAG | 1 cut(s) | 41 |
| MaeIII | GTNAC | 1 cut(s) | 77 |
| MalI | GATC | 2 cut(s) | 31, 145 |
| MboI | GATC | 2 cut(s) | 29, 143 |
| MboII | GAAGA | 1 cut(s) | 163 |
| MluCI | AATT | 3 cut(s) | 54, 64, 219 |
| MmeI | TCCRAC | 1 cut(s) | 223 |
| MnlI | CCTC | 4 cut(s) | 3, 97, 103, 117 |
| MseI | TTAA | 3 cut(s) | 53, 120, 218 |
| MspA1I | CMGCKG | 1 cut(s) | 187 |
| MspI | CCGG | 1 cut(s) | 75 |
| NdeII | GATC | 2 cut(s) | 29, 143 |
| NlaIV | GGNNCC | 1 cut(s) | 209 |
| PceI | AGGCCT | 1 cut(s) | 13 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 94 |
| PinAI | ACCGGT | 1 cut(s) | 74 |
| PspN4I | GGNNCC | 1 cut(s) | 209 |
| SaqAI | TTAA | 3 cut(s) | 53, 120, 218 |
| Sau3AI | GATC | 2 cut(s) | 29, 143 |
| SetI | ASST | 2 cut(s) | 94, 117 |
| SfcI | CTRYAG | 1 cut(s) | 182 |
| SgeI | CNNG | 7 cut(s) | 35, 53, 72, 87, 101, 149, 153 |
| SpeI | ACTAGT | 1 cut(s) | 40 |
| Sse9I | AATT | 3 cut(s) | 54, 64, 219 |
| SseBI | AGGCCT | 1 cut(s) | 13 |
| SsiI | CCGC | 1 cut(s) | 187 |
| SspMI | CTAG | 1 cut(s) | 41 |
| StuI | AGGCCT | 1 cut(s) | 13 |
| StyI | CCWWGG | 1 cut(s) | 88 |
| TaqI | TCGA | 2 cut(s) | 32, 146 |
| TasI | AATT | 3 cut(s) | 54, 64, 219 |
| Tru1I | TTAA | 3 cut(s) | 53, 120, 218 |
| Tru9I | TTAA | 3 cut(s) | 53, 120, 218 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 94 |
| XspI | CTAG | 1 cut(s) | 41 |