TMEM214, C-terminal, caspase 4 activator
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0355661 RchiOBHm_Chr3g0490641 |
| rosa_laevigata | RLG00000002036 RLG00000003840 |
| rosa_multiflora | Rmu_sc0001371.1_g000012 |
| rosa_roxburghii | Rroxscaffold_180G00433290 Rroxscaffold_4G00300050 |
| rosa_samantha | Rh2DG624700 Rh5AG413600 Rh6AG329600 Rh7BG437100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 55 |
| AccI | GTMKAC | 1 cut(s) | 184 |
| AciI | CCGC | 1 cut(s) | 55 |
| AclI | AACGTT | 1 cut(s) | 145 |
| AgsI | TTSAA | 1 cut(s) | 137 |
| AjnI | CCWGG | 1 cut(s) | 28 |
| Alw26I | GTCTC | 2 cut(s) | 9, 58 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 80, 112 |
| BanII | GRGCYC | 1 cut(s) | 130 |
| BciT130I | CCWGG | 1 cut(s) | 30 |
| BcoDI | GTCTC | 2 cut(s) | 9, 58 |
| Bme1390I | CCNGG | 1 cut(s) | 30 |
| BmrFI | CCNGG | 1 cut(s) | 30 |
| BpmI | CTGGAG | 1 cut(s) | 30 |
| BsaI | GGTCTC | 1 cut(s) | 58 |
| BseBI | CCWGG | 1 cut(s) | 30 |
| BseRI | GAGGAG | 1 cut(s) | 27 |
| BsmAI | GTCTC | 2 cut(s) | 9, 58 |
| Bso31I | GGTCTC | 1 cut(s) | 58 |
| Bsp1286I | GDGCHC | 1 cut(s) | 130 |
| Bsp143I | GATC | 1 cut(s) | 83 |
| BspACI | CCGC | 1 cut(s) | 55 |
| BspQI | GCTCTTC | 1 cut(s) | 45 |
| BspTNI | GGTCTC | 1 cut(s) | 58 |
| BsrBI | CCGCTC | 1 cut(s) | 55 |
| BssMI | GATC | 1 cut(s) | 83 |
| BssNAI | GTATAC | 1 cut(s) | 185 |
| Bst1107I | GTATAC | 1 cut(s) | 185 |
| Bst2UI | CCWGG | 1 cut(s) | 30 |
| Bst4CI | ACNGT | 1 cut(s) | 189 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstKTI | GATC | 1 cut(s) | 86 |
| BstMAI | GTCTC | 2 cut(s) | 9, 58 |
| BstMBI | GATC | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 125 |
| BstNI | CCWGG | 1 cut(s) | 30 |
| BstSCI | CCNGG | 1 cut(s) | 28 |
| BstZ17I | GTATAC | 1 cut(s) | 185 |
| CviJI | RGCY | 1 cut(s) | 128 |
| CviKI_1 | RGCY | 1 cut(s) | 128 |
| DpnI | GATC | 1 cut(s) | 85 |
| DpnII | GATC | 1 cut(s) | 83 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco24I | GRGCYC | 1 cut(s) | 130 |
| Eco31I | GGTCTC | 1 cut(s) | 58 |
| EcoRII | CCWGG | 1 cut(s) | 28 |
| EcoT38I | GRGCYC | 1 cut(s) | 130 |
| FaiI | YATR | 2 cut(s) | 111, 185 |
| FauI | CCCGC | 1 cut(s) | 48 |
| FblI | GTMKAC | 1 cut(s) | 184 |
| FriOI | GRGCYC | 1 cut(s) | 130 |
| GsuI | CTGGAG | 1 cut(s) | 30 |
| HinfI | GANTC | 1 cut(s) | 5 |
| Hpy166II | GTNNAC | 1 cut(s) | 185 |
| Hpy188I | TCNGA | 3 cut(s) | 63, 78, 100 |
| Hpy188III | TCNNGA | 1 cut(s) | 9 |
| Hpy8I | GTNNAC | 1 cut(s) | 185 |
| Hpy99I | CGWCG | 2 cut(s) | 82, 107 |
| HpyAV | CCTTC | 1 cut(s) | 34 |
| HpyCH4III | ACNGT | 1 cut(s) | 189 |
| HpyCH4IV | ACGT | 1 cut(s) | 145 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 125 |
| HpySE526I | ACGT | 1 cut(s) | 145 |
| Kzo9I | GATC | 1 cut(s) | 83 |
| LguI | GCTCTTC | 1 cut(s) | 45 |
| LpnPI | CCDG | 5 cut(s) | 15, 42, 109, 116, 160 |
| MaeII | ACGT | 1 cut(s) | 145 |
| MalI | GATC | 1 cut(s) | 85 |
| MbiI | CCGCTC | 1 cut(s) | 55 |
| MboI | GATC | 1 cut(s) | 83 |
| MboII | GAAGA | 1 cut(s) | 62 |
| MhlI | GDGCHC | 1 cut(s) | 130 |
| MmeI | TCCRAC | 3 cut(s) | 78, 101, 166 |
| MnlI | CCTC | 3 cut(s) | 5, 37, 109 |
| MspR9I | CCNGG | 1 cut(s) | 30 |
| MvaI | CCWGG | 1 cut(s) | 30 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 125 |
| NdeII | GATC | 1 cut(s) | 83 |
| PciSI | GCTCTTC | 1 cut(s) | 45 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 111 |
| Psp1406I | AACGTT | 1 cut(s) | 145 |
| Psp6I | CCWGG | 1 cut(s) | 28 |
| PspGI | CCWGG | 1 cut(s) | 28 |
| SapI | GCTCTTC | 1 cut(s) | 45 |
| Sau3AI | GATC | 1 cut(s) | 83 |
| ScrFI | CCNGG | 1 cut(s) | 30 |
| SduI | GDGCHC | 1 cut(s) | 130 |
| SetI | ASST | 2 cut(s) | 34, 148 |
| SsiI | CCGC | 1 cut(s) | 55 |
| StyD4I | CCNGG | 1 cut(s) | 28 |
| TaaI | ACNGT | 1 cut(s) | 189 |
| TaiI | ACGT | 1 cut(s) | 148 |
| TaqI | TCGA | 1 cut(s) | 86 |
| XmiI | GTMKAC | 1 cut(s) | 184 |