Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006550

Physical Location & Seq

Genomic Coordinates Reverse (-)

17002411 .. 17007827

Gene Structure 5417 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ37183

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGCGCCAGGTCCTATGGAGTCGGCATTGCCGGAATCATCATCGTCGTCGTCTTCCGGCGCTAACTCTGTTGTTGAGAGATCTGTGGCTGAGGATCTTCGTTTCAAGGAGCTGAGAGGTGTGCAATGGCGCTTAAATCTTGGGATTTTGCCTCTTTCTTCTTCCATTGATGATCTTCGCCGCGTCACAGCGGATTGTCGACGAAGATATGCTAGAATGAGAAGACGCCTTCTAGTTGATCCACCTAAGGATGGGAGTAGTTCTCCTGATCTTGCCATGGACAATCCTCTGTCCCAGAACCCAGAAAGCACCTGGGGTCGCTTCTTTCGGAATGCTGAGCTGGAGAAAATGGTTGACCAGGATTTATCACGTTTATACCCAGAACATGGAAGCTACTTCCAAACACCAGGATGTCAAGGCATGCTGAGAAGAATCTTGTTATTGTGGTGTCTCAGACATCCAGAGTGTGGTTACAGACAAGGAATGCACGAACTCTTGGCTCCTCTTCTATATGTTCTTCATGTTGACGTGGAGGGTCTATCTCAAGTGCGAAAGCTATATGAAGATCACTTCACTGATAAATTTGATGATCTATCTTATCATGAAAATGATTCGACTTACAATTTTGATTTAAAAAACCTTCCTGATTCCATGGAAGATGAGGATAGTTTGCAGGGAGATGCATCAAAAGTTAAGAGTCTGGATGAGCTTGATCCCAAGATACAGACCATTGTAATGCTCAGTGATGCTTATGGTGCTGAAGGTGAATTGGGTATTGTCTTATCTGAGAAATTTATGGAACACGATGCATACTGCATGTTTGATGCGTTAATGAGTGGGGTCAATGGTTCAGTTTCTATGGCAGAATTCTTCTCTCCCTCCCCTGCTGTTGGCTCTCAGACTAGCTTACCTCCTGTCATTGAAGCATCTGCTGCATTGTATCATTTGCTGTCTCTCGTTGATTCATCTCTACACAGCCACCTTGTTGAGCTTGGTGTTGAACCCCAGTATTTTGCACTCCGCTGGTTAAGGGTTTTATTTGGACGTGAATTTTCACTTGCAAATCTATTGATAATTTGGGATGAGATATTTCTGTCTGATAATCGTAAATTAGACAAAGGTGGTGAAGATGATGCAGGATCCGGCTTTAGCATCCTTAGTTCACCTCGAGGAGCATTTATTTCAGCCCTGGCAGTTTCCATGTTACTTCATTTGAGATCTTCCCTTCTTGCCACAGAGAATGCAACTGCATGTCTTCAACGGTTACTAAACTTTCCTGAGAATATTGATTTAAAGAAACTGATACAGAAGGCAACGTCATTGCAGGCTCTTGCTTTGGAGAACAATAGCTCATCCTCATTTCCTTCATATATGGGGCCATATGAGCATAGTAAATCAAAGGCTGTGAGAGGTCATAGTCTTTCAATCGACTCCGTTTCTCCAAAAACTCCATTAAGTTTGGTAAATGAAAGCTACTGGGAAGAGAAGTGGAGAGTTCTGCACAGGGAAGAAGAACTTAGGCAAGATATTTTGAAACAACAGGTTCCCAGCCAGAAGAAGCGATGGACTGAAAAAGTAAAATTGAGCCTATCTAGATCAGAATCTGCCCCATCTCCAGCAAAATGTGAGAATGGCAAAAAGACCCCTAGGTTTGCTGTTAGACGAAAGTTGCTGGAAGACCTCTCGAGAGTGCTCAGCTCAGAGGAAGATATTGAGAAATTAGGCACTCACAAAGACAAATGCTCTTCAGAAGTTGTGGTTAACAAAGAAGATGGTGTCAGTAAGGATCTTACTTCTGCAAATGAAGACAGATGTTTGAATGGAAGTCCAGCTAGTGAAGAGAACTCATTTGTTGGCTCATATCCAGCAAGTCCTCTGAGTGGGGCTGATGAACCTGAATTAGAGAAAAGTAGTGTTGGATCAAACTTATCCATTGATGAAAATGATGATAATCCAAATGATGATAATCCACAGTGTGTATCAGAAGGCCCACCTTGTCCGGTTTCTGATCCAGCTGAGGGTGTCTCTCAAGCATCCGAGTGCAGCAATCATTCAACGGGGAATTCAGTGACAGGAAAGGAACGAAAGCTTCTTTCTGGTAAATTCCAGAGGTTTTGGAAGTTGGGATGGAGTGCAGCTGGTGAAGGCACGTCCGAGAAAGGGGGCAACGCCCTTGACGCTACAAAATCTATCAGGAGTGATGTTGGTCAGAATGCAGCAAGCTCTTCTATGGCTGAAGGGTCCAATTCTGTAGTTAGCTGCAAAGGGGAAACTGTGGACCAGAATAGGACGGGTACTTTGAGGAATCTTGGGCATTCTATGCTTGATCATATACAGGTAATCGAGTCTGCTTTCCAGCAAGATCGAGGTGTTCAAGTGGGATCAGTCGAGAACTGTTCAACAAATACTTTAGTTGGCAAAGGACAAGTAACGGCCATTGCAGCTCTCAAGGAGCTTCGGAAGATCAGCAATCTTTTGTCAGAAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

829

Amino Acids

91.24

Weight (kDa)

5.2

Isoelectric Point (pI)

52.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	115 - 173	1.4e-12	Rab-GTPase-TBC domain
RabGAP-TBC	PF00566	265 - 367	1.4e-11	Rab-GTPase-TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006550)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29950 AT4G29950 AT4G29950 AT5G57210 AT5G57210
fragaria_vesca	FvH4_4g07350 FvH4_4g07350 FvH4_4g07350 FvH4_4g07350 FvH4_4g07350 FvH4_4g07350
malus_domestica	MD13G1242400.v1.1 MD16G1249600.v1.1
prunus_persica	Prupe.1G076400_v2.0.a1 Prupe.1G076400_v2.0.a1
pyrus_communis	pycom16g20900
rosa_chinensis	RchiOBHm_Chr4g0399721
rosa_laevigata	RLG00000009244
rosa_multiflora	Rmu_ssc0000118.1_g000009
rosa_roxburghii	Rroxscaffold_5G00344660
rosa_rugosa	Rorug04G0018500
rosa_samantha	Rh4AG096100 Rh4BG093600 Rh4CG104900 Rh4DG088900
rosa_wichuraiana	Rw4G007940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1167
AccB1I	GGYRCC	1 cut(s)	4
AccB7I	CCANNNNNTGG	2 cut(s)	386, 467
AccI	GTMKAC	1 cut(s)	199
AccII	CGCG	1 cut(s)	183
AciI	CCGC	3 cut(s)	181, 191, 1021
AclWI	GGATC	9 cut(s)	102, 233, 707, 1134, 1147, 1794, 1927, 2003, 2389
AcoI	YGGCCR	1 cut(s)	2433
AcsI	RAATTY	6 cut(s)	581, 791, 866, 1049, 2062, 2102
AcuI	CTGAAG	3 cut(s)	780, 1731, 2256
AcyI	GRCGYC	2 cut(s)	5, 226
AdeI	CACNNNGTG	1 cut(s)	1976
AfaI	GTAC	1 cut(s)	2296
AfiI	CCNNNNNNNGG	7 cut(s)	251, 386, 467, 890, 1880, 2018, 2160
AjiI	CACGTC	3 cut(s)	529, 1046, 2151
AjnI	CCWGG	5 cut(s)	7, 311, 357, 406, 1188
Alw21I	GWGCWC	1 cut(s)	1695
Alw26I	GTCTC	3 cut(s)	455, 957, 2029
AlwI	GGATC	9 cut(s)	102, 233, 707, 1134, 1147, 1794, 1927, 2003, 2389
AlwNI	CAGNNNCTG	1 cut(s)	1604
Ama87I	CYCGRG	2 cut(s)	1167, 1684
AoxI	GGCC	3 cut(s)	1376, 1987, 2433
ApeKI	GCWGC	6 cut(s)	932, 2043, 2135, 2216, 2259, 2441
ApoI	RAATTY	6 cut(s)	581, 791, 866, 1049, 2062, 2102
ArsI	GACNNNNNNTTYG	2 cut(s)	2281, 2313
AspA2I	CCTAGG	1 cut(s)	1646
AspLEI	GCGC	3 cut(s)	7, 62, 132
AspS9I	GGNCC	5 cut(s)	11, 1376, 1988, 2241, 2278
AsuHPI	GGTGA	4 cut(s)	776, 1136, 1155, 2153
AvaI	CYCGRG	2 cut(s)	1167, 1684
AvaII	GGWCC	3 cut(s)	11, 2241, 2278
AvrII	CCTAGG	1 cut(s)	1646
AxyI	CCTNAGG	1 cut(s)	246
BamHI	GGATCC	1 cut(s)	1139
BanI	GGYRCC	1 cut(s)	4
BbsI	GAAGAC	5 cut(s)	45, 229, 1247, 1683, 1812
Bbv12I	GWGCWC	1 cut(s)	1695
BbvCI	CCTCAGC	2 cut(s)	90, 2016
BbvI	GCAGC	6 cut(s)	919, 2055, 2147, 2228, 2246, 2453
BccI	CCATC	5 cut(s)	245, 1557, 1618, 1766, 2121
BceAI	ACGGC	1 cut(s)	2448
BciT130I	CCWGG	5 cut(s)	9, 313, 359, 408, 1190
BclI	TGATCA	1 cut(s)	2326
BcoDI	GTCTC	3 cut(s)	455, 957, 2029
BfaI	CTAG	6 cut(s)	213, 233, 903, 1593, 1647, 1833
BfmI	CTRYAG	1 cut(s)	2250
BfoI	RGCGCY	3 cut(s)	8, 63, 133
BglII	AGATCT	2 cut(s)	80, 1217
BisI	GCNGC	7 cut(s)	181, 933, 2044, 2136, 2217, 2260, 2442
BlnI	CCTAGG	1 cut(s)	1646
BlpI	GCTNAGC	2 cut(s)	336, 1694
BlsI	GCNGC	7 cut(s)	182, 934, 2045, 2137, 2218, 2261, 2443
Bme1390I	CCNGG	5 cut(s)	9, 313, 359, 408, 1190
Bme18I	GGWCC	3 cut(s)	11, 2241, 2278
BmeT110I	CYCGRG	2 cut(s)	1167, 1684
BmgBI	CACGTC	3 cut(s)	529, 1046, 2151
BmgT120I	GGNCC	5 cut(s)	11, 1376, 1988, 2241, 2278
BmiI	GGNNCC	6 cut(s)	6, 501, 1141, 1377, 1545, 2242
BmrFI	CCNGG	5 cut(s)	9, 313, 359, 408, 1190
BmrI	ACTGGG	2 cut(s)	1000, 1486
BmsI	GCATC	9 cut(s)	670, 692, 736, 796, 814, 935, 1123, 1161, 2042
BmuI	ACTGGG	2 cut(s)	1000, 1486
BpiI	GAAGAC	5 cut(s)	45, 229, 1247, 1683, 1812
BplI	GAGNNNNNCTC	4 cut(s)	247, 279, 2009, 2041
BpmI	CTGGAG	2 cut(s)	362, 1599
Bpu10I	CCTNAGC	2 cut(s)	90, 2016
Bpu1102I	GCTNAGC	2 cut(s)	336, 1694
BpuEI	CTTGAG	3 cut(s)	528, 2013, 2432
BsaBI	GATNNNNATC	3 cut(s)	1600, 1950, 1965
BsaHI	GRCGYC	2 cut(s)	5, 226
BsaJI	CCNNGG	5 cut(s)	276, 312, 651, 1188, 1646
BsaWI	WCCGGW	1 cut(s)	1999
Bsc4I	CCNNNNNNNGG	7 cut(s)	251, 386, 467, 890, 1880, 2018, 2160
Bse1I	ACTGG	2 cut(s)	1006, 1481
Bse21I	CCTNAGG	1 cut(s)	246
Bse3DI	GCAATG	4 cut(s)	26, 131, 1319, 2436
Bse8I	GATNNNNATC	3 cut(s)	1600, 1950, 1965
BseBI	CCWGG	5 cut(s)	9, 313, 359, 408, 1190
BseDI	CCNNGG	5 cut(s)	276, 312, 651, 1188, 1646
BseGI	GGATG	9 cut(s)	256, 416, 457, 709, 1087, 1152, 1352, 2033, 2132
BseJI	GATNNNNATC	3 cut(s)	1600, 1950, 1965
BseLI	CCNNNNNNNGG	7 cut(s)	251, 386, 467, 890, 1880, 2018, 2160
BseMI	GCAATG	4 cut(s)	26, 131, 1319, 2436
BseNI	ACTGG	2 cut(s)	1006, 1481
BseRI	GAGGAG	2 cut(s)	492, 1185
BseXI	GCAGC	6 cut(s)	919, 2055, 2147, 2228, 2246, 2453
BseYI	CCCAGC	1 cut(s)	1547
BsgI	GTGCAG	3 cut(s)	1484, 2062, 2154
Bsh1236I	CGCG	1 cut(s)	183
BshFI	GGCC	3 cut(s)	1378, 1989, 2435
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	1695
BsiHKCI	CYCGRG	2 cut(s)	1167, 1684
BsiSI	CCGG	4 cut(s)	32, 57, 1143, 2000
BslFI	GGGAC	1 cut(s)	277
BslI	CCNNNNNNNGG	7 cut(s)	251, 386, 467, 890, 1880, 2018, 2160
BsmAI	GTCTC	3 cut(s)	455, 957, 2029
BsmFI	GGGAC	1 cut(s)	277
BsmI	GAATGC	5 cut(s)	337, 489, 1246, 2218, 2314
BsnI	GGCC	3 cut(s)	1378, 1989, 2435
BsoBI	CYCGRG	2 cut(s)	1167, 1684
Bsp1286I	GDGCHC	1 cut(s)	1695
Bsp1720I	GCTNAGC	2 cut(s)	336, 1694
Bsp19I	CCATGG	2 cut(s)	276, 651
BspACI	CCGC	3 cut(s)	181, 191, 1021
BspANI	GGCC	3 cut(s)	1378, 1989, 2435
BspFNI	CGCG	1 cut(s)	183
BspHI	TCATGA	1 cut(s)	601
BspLI	GGNNCC	6 cut(s)	6, 501, 1141, 1377, 1545, 2242
BspPI	GGATC	9 cut(s)	102, 233, 707, 1134, 1147, 1794, 1927, 2003, 2389
BspQI	GCTCTTC	2 cut(s)	1750, 2230
BspT107I	GGYRCC	1 cut(s)	4
BsrDI	GCAATG	4 cut(s)	26, 131, 1319, 2436
BsrI	ACTGG	2 cut(s)	1006, 1481
BssECI	CCNNGG	5 cut(s)	276, 312, 651, 1188, 1646
BssNI	GRCGYC	2 cut(s)	5, 226
BssT1I	CCWWGG	3 cut(s)	276, 651, 1646
Bst2UI	CCWGG	5 cut(s)	9, 313, 359, 408, 1190
Bst4CI	ACNGT	4 cut(s)	1263, 1974, 2275, 2396
Bst6I	CTCTTC	5 cut(s)	510, 1476, 1750, 1833, 2230
BstACI	GRCGYC	2 cut(s)	5, 226
BstAPI	GCANNNNNTGC	2 cut(s)	932, 2320
BstC8I	GCNNGC	3 cut(s)	422, 1326, 2221
BstDSI	CCRYGG	2 cut(s)	276, 651
BstF5I	GGATG	9 cut(s)	256, 416, 457, 709, 1087, 1152, 1352, 2033, 2132
BstFNI	CGCG	1 cut(s)	183
BstH2I	RGCGCY	3 cut(s)	8, 63, 133
BstHHI	GCGC	3 cut(s)	7, 62, 132
BstMAI	GTCTC	3 cut(s)	455, 957, 2029
BstMWI	GCNNNNNNNGC	6 cut(s)	755, 932, 1384, 2177, 2320, 2441
BstNI	CCWGG	5 cut(s)	9, 313, 359, 408, 1190
BstNSI	RCATGY	3 cut(s)	424, 820, 1254
BstSCI	CCNGG	5 cut(s)	7, 311, 357, 406, 1188
BstSFI	CTRYAG	1 cut(s)	2250
BstUI	CGCG	1 cut(s)	183
BstV1I	GCAGC	6 cut(s)	919, 2055, 2147, 2228, 2246, 2453
BstV2I	GAAGAC	5 cut(s)	45, 229, 1247, 1683, 1812
BstX2I	RGATCY	5 cut(s)	80, 94, 1139, 1217, 1786
BstYI	RGATCY	5 cut(s)	80, 94, 1139, 1217, 1786
Bsu36I	CCTNAGG	1 cut(s)	246
BsuRI	GGCC	3 cut(s)	1378, 1989, 2435
BtgI	CCRYGG	2 cut(s)	276, 651
BtgZI	GCGATG	1 cut(s)	1576
BtrI	CACGTC	3 cut(s)	529, 1046, 2151
BtsCI	GGATG	9 cut(s)	256, 416, 457, 709, 1087, 1152, 1352, 2033, 2132
BtsIMutI	CAGTG	4 cut(s)	573, 748, 1979, 2073
Cac8I	GCNNGC	3 cut(s)	422, 1326, 2221
CaiI	CAGNNNCTG	1 cut(s)	1604
CciI	TCATGA	1 cut(s)	601
CfoI	GCGC	3 cut(s)	7, 62, 132
Cfr13I	GGNCC	5 cut(s)	11, 1376, 1988, 2241, 2278
CseI	GACGC	3 cut(s)	172, 234, 2186
Csp6I	GTAC	1 cut(s)	2295
CviAII	CATG	9 cut(s)	277, 386, 421, 521, 602, 652, 817, 1201, 1251
CviQI	GTAC	1 cut(s)	2295
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	2 cut(s)	633, 1293
DraIII	CACNNNGTG	1 cut(s)	1976
EaeI	YGGCCR	1 cut(s)	2433
Eam1104I	CTCTTC	5 cut(s)	510, 1476, 1750, 1833, 2230
EarI	CTCTTC	5 cut(s)	510, 1476, 1750, 1833, 2230
Eco130I	CCWWGG	3 cut(s)	276, 651, 1646
Eco47I	GGWCC	3 cut(s)	11, 2241, 2278
Eco57I	CTGAAG	3 cut(s)	780, 1731, 2256
Eco81I	CCTNAGG	1 cut(s)	246
Eco88I	CYCGRG	2 cut(s)	1167, 1684
EcoO109I	RGGNCCY	1 cut(s)	11
EcoRI	GAATTC	2 cut(s)	866, 2062
EcoRII	CCWGG	5 cut(s)	7, 311, 357, 406, 1188
EcoT14I	CCWWGG	3 cut(s)	276, 651, 1646
EcoT22I	ATGCAT	2 cut(s)	685, 811
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	276, 651, 1646
FaeI	CATG	9 cut(s)	280, 389, 424, 524, 605, 655, 820, 1204, 1254
FalI	AAGNNNNNCTT	2 cut(s)	1500, 1532
FaqI	GGGAC	1 cut(s)	277
FatI	CATG	9 cut(s)	276, 385, 420, 520, 601, 651, 816, 1200, 1250
FauNDI	CATATG	1 cut(s)	1381
FbaI	TGATCA	1 cut(s)	2326
FblI	GTMKAC	1 cut(s)	199
Fnu4HI	GCNGC	7 cut(s)	181, 933, 2044, 2136, 2217, 2260, 2442
FokI	GGATG	9 cut(s)	263, 423, 444, 716, 1094, 1139, 1339, 2020, 2139
Fsp4HI	GCNGC	7 cut(s)	181, 933, 2044, 2136, 2217, 2260, 2442
FspBI	CTAG	6 cut(s)	213, 233, 903, 1593, 1647, 1833
GlaI	GCGC	3 cut(s)	6, 61, 131
GluI	GCNGC	7 cut(s)	181, 933, 2044, 2136, 2217, 2260, 2442
GsaI	CCCAGC	1 cut(s)	1551
GsuI	CTGGAG	2 cut(s)	362, 1599
HaeII	RGCGCY	3 cut(s)	8, 63, 133
HaeIII	GGCC	3 cut(s)	1378, 1989, 2435
HapII	CCGG	4 cut(s)	32, 57, 1143, 2000
HgaI	GACGC	3 cut(s)	172, 234, 2186
HhaI	GCGC	3 cut(s)	7, 62, 132
Hin1I	GRCGYC	2 cut(s)	5, 226
Hin1II	CATG	9 cut(s)	280, 389, 424, 524, 605, 655, 820, 1204, 1254
Hin6I	GCGC	3 cut(s)	5, 60, 130
HinP1I	GCGC	3 cut(s)	5, 60, 130
HincII	GTYRAC	4 cut(s)	200, 355, 526, 1762
HindII	GTYRAC	4 cut(s)	200, 355, 526, 1762
HindIII	AAGCTT	1 cut(s)	2087
HpaI	GTTAAC	1 cut(s)	1762
HpaII	CCGG	4 cut(s)	32, 57, 1143, 2000
HphI	GGTGA	4 cut(s)	776, 1136, 1155, 2153
Hpy166II	GTNNAC	6 cut(s)	200, 355, 526, 1163, 1762, 2278
Hpy8I	GTNNAC	6 cut(s)	200, 355, 526, 1163, 1762, 2278
Hpy99I	CGWCG	3 cut(s)	49, 52, 204
HpyAV	CCTTC	9 cut(s)	239, 650, 755, 1235, 1303, 1374, 1979, 2138, 2231
HpyCH4III	ACNGT	4 cut(s)	1263, 1974, 2275, 2396
HpyCH4IV	ACGT	5 cut(s)	370, 528, 1045, 1316, 2150
HpyF10VI	GCNNNNNNNGC	6 cut(s)	755, 932, 1384, 2177, 2320, 2441
HpySE526I	ACGT	5 cut(s)	370, 528, 1045, 1316, 2150
Hsp92I	GRCGYC	2 cut(s)	5, 226
Hsp92II	CATG	9 cut(s)	280, 389, 424, 524, 605, 655, 820, 1204, 1254
HspAI	GCGC	3 cut(s)	5, 60, 130
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	2326
KspAI	GTTAAC	1 cut(s)	1762
LguI	GCTCTTC	2 cut(s)	1750, 2230
LmnI	GCTCC	4 cut(s)	109, 505, 1172, 2452
Lsp1109I	GCAGC	6 cut(s)	919, 2055, 2147, 2228, 2246, 2453
LweI	GCATC	9 cut(s)	670, 692, 736, 796, 814, 935, 1123, 1161, 2042
MaeI	CTAG	6 cut(s)	213, 233, 903, 1593, 1647, 1833
MaeII	ACGT	5 cut(s)	370, 528, 1045, 1316, 2150
MaeIII	GTNAC	6 cut(s)	184, 470, 1203, 1263, 2068, 2428
MflI	RGATCY	5 cut(s)	80, 94, 1139, 1217, 1786
MhlI	GDGCHC	1 cut(s)	1695
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	29, 706, 1424, 2354
MmeI	TCCRAC	1 cut(s)	1897
Mph1103I	ATGCAT	2 cut(s)	685, 811
MseI	TTAA	8 cut(s)	134, 632, 693, 830, 1028, 1292, 1454, 1761
MslI	CAYNNNNRTG	4 cut(s)	409, 606, 734, 2038
MspA1I	CMGCKG	4 cut(s)	191, 1023, 2015, 2138
MspI	CCGG	4 cut(s)	32, 57, 1143, 2000
MspR9I	CCNGG	5 cut(s)	9, 313, 359, 408, 1190
Mva1269I	GAATGC	5 cut(s)	337, 489, 1246, 2218, 2314
MvaI	CCWGG	5 cut(s)	9, 313, 359, 408, 1190
MvnI	CGCG	1 cut(s)	183
MwoI	GCNNNNNNNGC	6 cut(s)	755, 932, 1384, 2177, 2320, 2441
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	2 cut(s)	276, 651
NdeI	CATATG	1 cut(s)	1381
NlaIII	CATG	9 cut(s)	280, 389, 424, 524, 605, 655, 820, 1204, 1254
NlaIV	GGNNCC	6 cut(s)	6, 501, 1141, 1377, 1545, 2242
NmuCI	GTSAC	2 cut(s)	184, 2068
NsiI	ATGCAT	2 cut(s)	685, 811
NspI	RCATGY	3 cut(s)	424, 820, 1254
PaeI	GCATGC	1 cut(s)	424
PaeR7I	CTCGAG	2 cut(s)	1167, 1684
PagI	TCATGA	1 cut(s)	601
PciSI	GCTCTTC	2 cut(s)	1750, 2230
PctI	GAATGC	5 cut(s)	337, 489, 1246, 2218, 2314
PfeI	GAWTC	7 cut(s)	35, 432, 611, 647, 962, 1601, 2305
PflMI	CCANNNNNTGG	2 cut(s)	386, 467
PkrI	GCNGC	7 cut(s)	182, 934, 2045, 2137, 2218, 2261, 2443
PleI	GAGTC	4 cut(s)	28, 705, 1424, 2353
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	4 cut(s)	28, 705, 1424, 2353
PpuMI	RGGWCCY	1 cut(s)	11
Psp5II	RGGWCCY	1 cut(s)	11
Psp6I	CCWGG	5 cut(s)	7, 311, 357, 406, 1188
PspFI	CCCAGC	1 cut(s)	1547
PspGI	CCWGG	5 cut(s)	7, 311, 357, 406, 1188
PspN4I	GGNNCC	6 cut(s)	6, 501, 1141, 1377, 1545, 2242
PspPI	GGNCC	5 cut(s)	11, 1376, 1988, 2241, 2278
PspPPI	RGGWCCY	1 cut(s)	11
PspXI	VCTCGAGB	1 cut(s)	1167
PstNI	CAGNNNCTG	1 cut(s)	1604
PsuI	RGATCY	5 cut(s)	80, 94, 1139, 1217, 1786
PvuII	CAGCTG	2 cut(s)	2015, 2138
RsaI	GTAC	1 cut(s)	2296
RsaNI	GTAC	1 cut(s)	2295
RseI	CAYNNNNRTG	4 cut(s)	409, 606, 734, 2038
SalI	GTCGAC	1 cut(s)	198
SapI	GCTCTTC	2 cut(s)	1750, 2230
SaqAI	TTAA	8 cut(s)	134, 632, 693, 830, 1028, 1292, 1454, 1761
SatI	GCNGC	7 cut(s)	181, 933, 2044, 2136, 2217, 2260, 2442
Sau96I	GGNCC	5 cut(s)	11, 1376, 1988, 2241, 2278
SchI	GAGTC	4 cut(s)	29, 706, 1424, 2354
ScrFI	CCNGG	5 cut(s)	9, 313, 359, 408, 1190
SduI	GDGCHC	1 cut(s)	1695
SfaNI	GCATC	9 cut(s)	670, 692, 736, 796, 814, 935, 1123, 1161, 2042
SfcI	CTRYAG	1 cut(s)	2250
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	2 cut(s)	1167, 1684
SinI	GGWCC	3 cut(s)	11, 2241, 2278
SlaI	CTCGAG	2 cut(s)	1167, 1684
SmiMI	CAYNNNNRTG	4 cut(s)	409, 606, 734, 2038
SmlI	CTYRAG	5 cut(s)	543, 1167, 1684, 2028, 2447
SmoI	CTYRAG	5 cut(s)	543, 1167, 1684, 2028, 2447
SphI	GCATGC	1 cut(s)	424
SsiI	CCGC	3 cut(s)	181, 191, 1021
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1285
SspMI	CTAG	6 cut(s)	213, 233, 903, 1593, 1647, 1833
StyD4I	CCNGG	5 cut(s)	7, 311, 357, 406, 1188
StyI	CCWWGG	3 cut(s)	276, 651, 1646
TaaI	ACNGT	4 cut(s)	1263, 1974, 2275, 2396
TaiI	ACGT	5 cut(s)	373, 531, 1048, 1319, 2153
TaqI	TCGA	8 cut(s)	199, 614, 1168, 1428, 1685, 2343, 2365, 2388
TauI	GCSGC	1 cut(s)	183
TfiI	GAWTC	7 cut(s)	35, 432, 611, 647, 962, 1601, 2305
Tru1I	TTAA	8 cut(s)	134, 632, 693, 830, 1028, 1292, 1454, 1761
Tru9I	TTAA	8 cut(s)	134, 632, 693, 830, 1028, 1292, 1454, 1761
TscAI	CASTG	4 cut(s)	580, 748, 1979, 2073
TseFI	GTSAC	2 cut(s)	184, 2068
TseI	GCWGC	6 cut(s)	932, 2043, 2135, 2216, 2259, 2441
Tsp45I	GTSAC	2 cut(s)	184, 2068
TspGWI	ACGGA	1 cut(s)	1423
TspRI	CASTG	4 cut(s)	580, 748, 1979, 2073
Van91I	CCANNNNNTGG	2 cut(s)	386, 467
VpaK11BI	GGWCC	3 cut(s)	11, 2241, 2278
XapI	RAATTY	6 cut(s)	581, 791, 866, 1049, 2062, 2102
XbaI	TCTAGA	1 cut(s)	1592
XceI	RCATGY	3 cut(s)	424, 820, 1254
XcmI	CCANNNNNNNNNTGG	1 cut(s)	309
XhoI	CTCGAG	2 cut(s)	1167, 1684
XmaJI	CCTAGG	1 cut(s)	1646
XmiI	GTMKAC	1 cut(s)	199
XspI	CTAG	6 cut(s)	213, 233, 903, 1593, 1647, 1833
Zsp2I	ATGCAT	2 cut(s)	685, 811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.