No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g15970 |
| rosa_chinensis | RchiOBHm_Chr3g0469671 RchiOBHm_Chr4g0407791 |
| rosa_laevigata | RLG00000008698 |
| rosa_multiflora | Rmu_sc0018796.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00411550 |
| rosa_rugosa | Rorug03G0103400 |
| rosa_samantha | Rh3AG152900 Rh3BG176700 Rh3CG167600 Rh4DG140300 |
| rosa_wichuraiana | Rw3G014410 Rw4G011940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 523 |
| AciI | CCGC | 2 cut(s) | 34, 303 |
| AcoI | YGGCCR | 1 cut(s) | 147 |
| AcsI | RAATTY | 2 cut(s) | 6, 707 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 181, 347, 352 |
| AluBI | AGCT | 3 cut(s) | 194, 555, 687 |
| AluI | AGCT | 3 cut(s) | 194, 555, 687 |
| Alw26I | GTCTC | 1 cut(s) | 263 |
| AoxI | GGCC | 2 cut(s) | 147, 526 |
| ApeKI | GCWGC | 2 cut(s) | 305, 552 |
| ApoI | RAATTY | 2 cut(s) | 6, 707 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 170 |
| AspLEI | GCGC | 1 cut(s) | 523 |
| AspS9I | GGNCC | 1 cut(s) | 748 |
| AsuHPI | GGTGA | 1 cut(s) | 205 |
| AvaII | GGWCC | 1 cut(s) | 748 |
| BbvI | GCAGC | 2 cut(s) | 292, 564 |
| BccI | CCATC | 4 cut(s) | 139, 162, 480, 821 |
| BciVI | GTATCC | 1 cut(s) | 30 |
| BcoDI | GTCTC | 1 cut(s) | 263 |
| BfaI | CTAG | 2 cut(s) | 110, 530 |
| BfmI | CTRYAG | 2 cut(s) | 247, 716 |
| BfuI | GTATCC | 1 cut(s) | 30 |
| BisI | GCNGC | 2 cut(s) | 306, 553 |
| BlsI | GCNGC | 2 cut(s) | 307, 554 |
| Bme18I | GGWCC | 1 cut(s) | 748 |
| BmgT120I | GGNCC | 1 cut(s) | 748 |
| BmiI | GGNNCC | 1 cut(s) | 491 |
| BmsI | GCATC | 2 cut(s) | 582, 684 |
| BpmI | CTGGAG | 2 cut(s) | 641, 709 |
| BsaI | GGTCTC | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 1 cut(s) | 346 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 181, 347, 352 |
| Bse1I | ACTGG | 1 cut(s) | 658 |
| Bse3DI | GCAATG | 1 cut(s) | 781 |
| BseDI | CCNNGG | 1 cut(s) | 346 |
| BseGI | GGATG | 6 cut(s) | 150, 154, 206, 240, 442, 699 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 181, 347, 352 |
| BseMI | GCAATG | 1 cut(s) | 781 |
| BseMII | CTCAG | 3 cut(s) | 171, 246, 697 |
| BseNI | ACTGG | 1 cut(s) | 658 |
| BseRI | GAGGAG | 1 cut(s) | 94 |
| BseXI | GCAGC | 2 cut(s) | 292, 564 |
| BseYI | CCCAGC | 1 cut(s) | 460 |
| Bsh1236I | CGCG | 1 cut(s) | 523 |
| Bsh1285I | CGRYCG | 1 cut(s) | 14 |
| BshFI | GGCC | 2 cut(s) | 149, 528 |
| BsiEI | CGRYCG | 1 cut(s) | 14 |
| BslFI | GGGAC | 1 cut(s) | 622 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 181, 347, 352 |
| BsmAI | GTCTC | 1 cut(s) | 263 |
| BsmFI | GGGAC | 1 cut(s) | 622 |
| BsnI | GGCC | 2 cut(s) | 149, 528 |
| Bso31I | GGTCTC | 1 cut(s) | 263 |
| BspACI | CCGC | 2 cut(s) | 34, 303 |
| BspANI | GGCC | 2 cut(s) | 149, 528 |
| BspCNI | CTCAG | 3 cut(s) | 172, 245, 696 |
| BspFNI | CGCG | 1 cut(s) | 523 |
| BspLI | GGNNCC | 1 cut(s) | 491 |
| BspTNI | GGTCTC | 1 cut(s) | 263 |
| BsrDI | GCAATG | 1 cut(s) | 781 |
| BsrI | ACTGG | 1 cut(s) | 658 |
| BssECI | CCNNGG | 1 cut(s) | 346 |
| BssT1I | CCWWGG | 1 cut(s) | 346 |
| Bst4CI | ACNGT | 3 cut(s) | 53, 251, 280 |
| BstDEI | CTNAG | 5 cut(s) | 180, 190, 232, 481, 683 |
| BstEII | GGTNACC | 1 cut(s) | 379 |
| BstF5I | GGATG | 6 cut(s) | 150, 154, 206, 240, 442, 699 |
| BstFNI | CGCG | 1 cut(s) | 523 |
| BstHHI | GCGC | 1 cut(s) | 523 |
| BstMAI | GTCTC | 1 cut(s) | 263 |
| BstMCI | CGRYCG | 1 cut(s) | 14 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 191 |
| BstPI | GGTNACC | 1 cut(s) | 379 |
| BstSFI | CTRYAG | 2 cut(s) | 247, 716 |
| BstUI | CGCG | 1 cut(s) | 523 |
| BstV1I | GCAGC | 2 cut(s) | 292, 564 |
| BsuI | GTATCC | 1 cut(s) | 30 |
| BsuRI | GGCC | 2 cut(s) | 149, 528 |
| BtsCI | GGATG | 6 cut(s) | 150, 154, 206, 240, 442, 699 |
| BtsIMutI | CAGTG | 1 cut(s) | 643 |
| CfoI | GCGC | 1 cut(s) | 523 |
| Cfr13I | GGNCC | 1 cut(s) | 748 |
| CseI | GACGC | 1 cut(s) | 787 |
| CviAII | CATG | 1 cut(s) | 376 |
| CviJI | RGCY | 9 cut(s) | 113, 149, 185, 194, 351, 528, 555, 630, 687 |
| CviKI_1 | RGCY | 9 cut(s) | 113, 149, 185, 194, 351, 528, 555, 630, 687 |
| DdeI | CTNAG | 5 cut(s) | 180, 190, 232, 481, 683 |
| EaeI | YGGCCR | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 1 cut(s) | 346 |
| Eco31I | GGTCTC | 1 cut(s) | 263 |
| Eco47I | GGWCC | 1 cut(s) | 748 |
| Eco91I | GGTNACC | 1 cut(s) | 379 |
| EcoO65I | GGTNACC | 1 cut(s) | 379 |
| EcoT14I | CCWWGG | 1 cut(s) | 346 |
| ErhI | CCWWGG | 1 cut(s) | 346 |
| FaeI | CATG | 1 cut(s) | 379 |
| FaqI | GGGAC | 1 cut(s) | 622 |
| FatI | CATG | 1 cut(s) | 375 |
| Fnu4HI | GCNGC | 2 cut(s) | 306, 553 |
| FokI | GGATG | 6 cut(s) | 141, 157, 193, 227, 449, 706 |
| Fsp4HI | GCNGC | 2 cut(s) | 306, 553 |
| FspBI | CTAG | 2 cut(s) | 110, 530 |
| GlaI | GCGC | 1 cut(s) | 522 |
| GluI | GCNGC | 2 cut(s) | 306, 553 |
| GsaI | CCCAGC | 1 cut(s) | 464 |
| GsuI | CTGGAG | 2 cut(s) | 641, 709 |
| HaeIII | GGCC | 2 cut(s) | 149, 528 |
| HgaI | GACGC | 1 cut(s) | 787 |
| HhaI | GCGC | 1 cut(s) | 523 |
| Hin1II | CATG | 1 cut(s) | 379 |
| Hin6I | GCGC | 1 cut(s) | 521 |
| HinP1I | GCGC | 1 cut(s) | 521 |
| HinfI | GANTC | 3 cut(s) | 237, 536, 646 |
| HphI | GGTGA | 1 cut(s) | 205 |
| Hpy188I | TCNGA | 4 cut(s) | 120, 165, 181, 706 |
| Hpy188III | TCNNGA | 1 cut(s) | 234 |
| HpyAV | CCTTC | 4 cut(s) | 109, 226, 238, 559 |
| HpyCH4III | ACNGT | 3 cut(s) | 53, 251, 280 |
| HpyCH4V | TGCA | 2 cut(s) | 323, 842 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 191 |
| HpyF3I | CTNAG | 5 cut(s) | 180, 190, 232, 481, 683 |
| Hsp92II | CATG | 1 cut(s) | 379 |
| HspAI | GCGC | 1 cut(s) | 521 |
| LpnPI | CCDG | 8 cut(s) | 219, 247, 310, 408, 446, 660, 671, 673 |
| Lsp1109I | GCAGC | 2 cut(s) | 292, 564 |
| LweI | GCATC | 2 cut(s) | 582, 684 |
| MaeI | CTAG | 2 cut(s) | 110, 530 |
| MaeIII | GTNAC | 1 cut(s) | 379 |
| MboII | GAAGA | 2 cut(s) | 214, 467 |
| MfeI | CAATTG | 1 cut(s) | 504 |
| MluCI | AATT | 3 cut(s) | 6, 504, 707 |
| MlyI | GAGTC | 1 cut(s) | 545 |
| MmeI | TCCRAC | 2 cut(s) | 143, 623 |
| MnlI | CCTC | 7 cut(s) | 115, 175, 221, 351, 511, 629, 684 |
| MroXI | GAANNNNTTC | 1 cut(s) | 170 |
| MseI | TTAA | 5 cut(s) | 359, 390, 429, 668, 762 |
| MspA1I | CMGCKG | 2 cut(s) | 305, 687 |
| MunI | CAATTG | 1 cut(s) | 504 |
| MvnI | CGCG | 1 cut(s) | 523 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 191 |
| NlaIII | CATG | 1 cut(s) | 379 |
| NlaIV | GGNNCC | 1 cut(s) | 491 |
| PdmI | GAANNNNTTC | 1 cut(s) | 170 |
| PfeI | GAWTC | 2 cut(s) | 237, 646 |
| PkrI | GCNGC | 2 cut(s) | 307, 554 |
| PleI | GAGTC | 1 cut(s) | 544 |
| PpsI | GAGTC | 1 cut(s) | 544 |
| PspEI | GGTNACC | 1 cut(s) | 379 |
| PspFI | CCCAGC | 1 cut(s) | 460 |
| PspN4I | GGNNCC | 1 cut(s) | 491 |
| PspPI | GGNCC | 1 cut(s) | 748 |
| PvuII | CAGCTG | 1 cut(s) | 687 |
| SaqAI | TTAA | 5 cut(s) | 359, 390, 429, 668, 762 |
| SatI | GCNGC | 2 cut(s) | 306, 553 |
| Sau96I | GGNCC | 1 cut(s) | 748 |
| SchI | GAGTC | 1 cut(s) | 545 |
| SetI | ASST | 8 cut(s) | 196, 218, 386, 435, 495, 557, 679, 689 |
| SfaNI | GCATC | 2 cut(s) | 582, 684 |
| SfcI | CTRYAG | 2 cut(s) | 247, 716 |
| SinI | GGWCC | 1 cut(s) | 748 |
| Sse9I | AATT | 3 cut(s) | 6, 504, 707 |
| SsiI | CCGC | 2 cut(s) | 34, 303 |
| SspMI | CTAG | 2 cut(s) | 110, 530 |
| StyI | CCWWGG | 1 cut(s) | 346 |
| TaaI | ACNGT | 3 cut(s) | 53, 251, 280 |
| TasI | AATT | 3 cut(s) | 6, 504, 707 |
| TfiI | GAWTC | 2 cut(s) | 237, 646 |
| Tru1I | TTAA | 5 cut(s) | 359, 390, 429, 668, 762 |
| Tru9I | TTAA | 5 cut(s) | 359, 390, 429, 668, 762 |
| TscAI | CASTG | 1 cut(s) | 643 |
| TseI | GCWGC | 2 cut(s) | 305, 552 |
| TspDTI | ATGAA | 4 cut(s) | 208, 229, 389, 578 |
| TspGWI | ACGGA | 1 cut(s) | 835 |
| TspRI | CASTG | 1 cut(s) | 643 |
| VpaK11BI | GGWCC | 1 cut(s) | 748 |
| XapI | RAATTY | 2 cut(s) | 6, 707 |
| XmnI | GAANNNNTTC | 1 cut(s) | 170 |
| XspI | CTAG | 2 cut(s) | 110, 530 |