Belongs to the NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03250 AT5G03250 |
| fragaria_vesca | FvH4_6g16010 FvH4_7g19310 FvH4_7g19310 FvH4_7g19310 |
| malus_domestica | MD01G1107700.v1.1 MD04G1096800.v1.1 MD07G1173300.v1.1 |
| prunus_persica | Prupe.2G212500_v2.0.a1 Prupe.6G236100_v2.0.a1 |
| pyrus_communis | pycom01g13460 pycom04g09190 pycom07g16800 pycom12g11690 |
| rosa_chinensis | RchiOBHm_Chr1g0363191 RchiOBHm_Chr3g0469731 |
| rosa_laevigata | RLG00000024326 RLG00000027585 |
| rosa_multiflora | Rmu_sc0002925.1_g000004 Rmu_sc0010644.1_g000001 Rmu_sc0022819.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00293390 Rroxscaffold_6G00411520 |
| rosa_rugosa | Rorug01G0305300 Rorug03G0103400 Rorug03G0103500 Rorug03G0103600 Rorug03G0103700 Rorug03G0103800 Rorug03G0103800 |
| rosa_samantha | Rh1AG314100 Rh1BG277600 Rh1CG294000 Rh1DG308300 Rh3AG153200 Rh3BG177200 Rh3CG168100 Rh3DG198400 |
| rosa_wichuraiana | Rw1G027830 Rw3G014440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2991 |
| Acc36I | ACCTGC | 1 cut(s) | 2509 |
| Acc65I | GGTACC | 1 cut(s) | 15 |
| AccB1I | GGYRCC | 4 cut(s) | 15, 1820, 2591, 4381 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1598 |
| AccBSI | CCGCTC | 1 cut(s) | 829 |
| AccI | GTMKAC | 2 cut(s) | 4448, 4815 |
| AccII | CGCG | 2 cut(s) | 13, 234 |
| AccIII | TCCGGA | 3 cut(s) | 49, 82, 913 |
| AcoI | YGGCCR | 2 cut(s) | 42, 4756 |
| AcyI | GRCGYC | 2 cut(s) | 102, 126 |
| AdeI | CACNNNGTG | 1 cut(s) | 1922 |
| AfaI | GTAC | 9 cut(s) | 17, 35, 2481, 2700, 3373, 3481, 4228, 4317, 4470 |
| AflIII | ACRYGT | 5 cut(s) | 1303, 1505, 2239, 2275, 4498 |
| AjnI | CCWGG | 8 cut(s) | 1749, 2179, 2587, 3036, 3666, 4213, 4471, 4971 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3616, 3648 |
| AleI | CACNNNNGTG | 1 cut(s) | 4373 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 3180, 3212, 4425, 4457 |
| Alw21I | GWGCWC | 3 cut(s) | 57, 418, 845 |
| Alw26I | GTCTC | 7 cut(s) | 366, 770, 915, 2149, 3267, 3572, 4138 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 358, 1283, 3191, 3880, 4220, 4478 |
| Aor13HI | TCCGGA | 3 cut(s) | 49, 82, 913 |
| AoxI | GGCC | 8 cut(s) | 42, 87, 214, 2206, 2665, 3664, 4009, 4756 |
| ApeKI | GCWGC | 9 cut(s) | 161, 1460, 2002, 2540, 2741, 3299, 3937, 4402, 4748 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2888, 2920, 4664, 4696 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 171, 2709, 2835, 3606, 3618, 4557, 4788 |
| Asp718I | GGTACC | 1 cut(s) | 15 |
| AspLEI | GCGC | 1 cut(s) | 663 |
| AspS9I | GGNCC | 4 cut(s) | 1631, 2287, 3998, 4009 |
| AsuHPI | GGTGA | 9 cut(s) | 355, 611, 777, 1602, 1962, 2383, 3410, 3518, 4151 |
| AsuII | TTCGAA | 1 cut(s) | 4196 |
| AvaII | GGWCC | 3 cut(s) | 1631, 2287, 3998 |
| BalI | TGGCCA | 1 cut(s) | 4758 |
| BanI | GGYRCC | 4 cut(s) | 15, 1820, 2591, 4381 |
| BanII | GRGCYC | 3 cut(s) | 57, 845, 998 |
| BbsI | GAAGAC | 3 cut(s) | 1119, 3621, 4401 |
| Bbv12I | GWGCWC | 3 cut(s) | 57, 418, 845 |
| BbvCI | CCTCAGC | 2 cut(s) | 4407, 4605 |
| BbvI | GCAGC | 9 cut(s) | 148, 1472, 2014, 2527, 2728, 3286, 3949, 4414, 4735 |
| BceAI | ACGGC | 4 cut(s) | 52, 286, 396, 4395 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 143, 177, 4017, 4051 |
| BciT130I | CCWGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| BciVI | GTATCC | 3 cut(s) | 1133, 1207, 1495 |
| BclI | TGATCA | 2 cut(s) | 360, 3331 |
| BcoDI | GTCTC | 7 cut(s) | 366, 770, 915, 2149, 3267, 3572, 4138 |
| BfmI | CTRYAG | 8 cut(s) | 729, 900, 1992, 2100, 2430, 2631, 3935, 4587 |
| BfuAI | ACCTGC | 1 cut(s) | 2509 |
| BfuI | GTATCC | 3 cut(s) | 1133, 1207, 1495 |
| BglII | AGATCT | 2 cut(s) | 2354, 2722 |
| BmcAI | AGTACT | 3 cut(s) | 2700, 3373, 3481 |
| Bme1390I | CCNGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| Bme18I | GGWCC | 3 cut(s) | 1631, 2287, 3998 |
| BmgT120I | GGNCC | 4 cut(s) | 1631, 2287, 3998, 4009 |
| BmiI | GGNNCC | 6 cut(s) | 17, 1632, 1822, 2593, 3699, 4383 |
| BmrFI | CCNGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| BmrI | ACTGGG | 2 cut(s) | 1155, 3347 |
| BmuI | ACTGGG | 2 cut(s) | 1155, 3347 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2240, 2276 |
| BpiI | GAAGAC | 3 cut(s) | 1119, 3621, 4401 |
| BpmI | CTGGAG | 6 cut(s) | 610, 674, 2160, 2202, 2571, 2769 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1755, 4407, 4605 |
| Bpu14I | TTCGAA | 1 cut(s) | 4196 |
| BpuEI | CTTGAG | 4 cut(s) | 2149, 3770, 4090, 4331 |
| BsaAI | YACGTR | 1 cut(s) | 1180 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2472, 3021, 4062 |
| BsaHI | GRCGYC | 2 cut(s) | 102, 126 |
| BsaI | GGTCTC | 1 cut(s) | 4138 |
| BsaWI | WCCGGW | 3 cut(s) | 49, 82, 913 |
| Bse1I | ACTGG | 7 cut(s) | 332, 804, 1161, 1398, 1953, 3000, 3342 |
| Bse3DI | GCAATG | 6 cut(s) | 1894, 2025, 2404, 2605, 3794, 3859 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2472, 3021, 4062 |
| BseAI | TCCGGA | 3 cut(s) | 49, 82, 913 |
| BseBI | CCWGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| BseJI | GATNNNNATC | 3 cut(s) | 2472, 3021, 4062 |
| BseMI | GCAATG | 6 cut(s) | 1894, 2025, 2404, 2605, 3794, 3859 |
| BseMII | CTCAG | 6 cut(s) | 858, 2925, 4421, 4619, 4689, 4811 |
| BseNI | ACTGG | 7 cut(s) | 332, 804, 1161, 1398, 1953, 3000, 3342 |
| BseRI | GAGGAG | 6 cut(s) | 408, 411, 671, 1310, 2390, 2430 |
| BseXI | GCAGC | 9 cut(s) | 148, 1472, 2014, 2527, 2728, 3286, 3949, 4414, 4735 |
| BseYI | CCCAGC | 2 cut(s) | 455, 461 |
| BsgI | GTGCAG | 1 cut(s) | 1388 |
| Bsh1236I | CGCG | 2 cut(s) | 13, 234 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3314 |
| BshFI | GGCC | 8 cut(s) | 44, 89, 216, 2208, 2667, 3666, 4011, 4758 |
| BshNI | GGYRCC | 4 cut(s) | 15, 1820, 2591, 4381 |
| BsiEI | CGRYCG | 1 cut(s) | 3314 |
| BsiHKAI | GWGCWC | 3 cut(s) | 57, 418, 845 |
| BsiSI | CCGG | 6 cut(s) | 50, 83, 914, 3317, 4292, 4670 |
| BslFI | GGGAC | 6 cut(s) | 1644, 1717, 2305, 3019, 3967, 4487 |
| BsmAI | GTCTC | 7 cut(s) | 366, 770, 915, 2149, 3267, 3572, 4138 |
| BsmBI | CGTCTC | 2 cut(s) | 2149, 3267 |
| BsmFI | GGGAC | 6 cut(s) | 1644, 1717, 2305, 3019, 3967, 4487 |
| BsmI | GAATGC | 5 cut(s) | 413, 663, 2129, 4101, 4487 |
| BsnI | GGCC | 8 cut(s) | 44, 89, 216, 2208, 2667, 3666, 4011, 4758 |
| Bso31I | GGTCTC | 1 cut(s) | 4138 |
| Bsp119I | TTCGAA | 1 cut(s) | 4196 |
| Bsp1286I | GDGCHC | 4 cut(s) | 57, 418, 845, 998 |
| Bsp13I | TCCGGA | 3 cut(s) | 49, 82, 913 |
| Bsp1407I | TGTACA | 1 cut(s) | 4226 |
| Bsp19I | CCATGG | 6 cut(s) | 108, 1597, 2150, 3450, 3558, 4389 |
| BspANI | GGCC | 8 cut(s) | 44, 89, 216, 2208, 2667, 3666, 4011, 4758 |
| BspCNI | CTCAG | 6 cut(s) | 857, 2924, 4420, 4618, 4688, 4810 |
| BspEI | TCCGGA | 3 cut(s) | 49, 82, 913 |
| BspFNI | CGCG | 2 cut(s) | 13, 234 |
| BspHI | TCATGA | 2 cut(s) | 175, 1722 |
| BspLI | GGNNCC | 6 cut(s) | 17, 1632, 1822, 2593, 3699, 4383 |
| BspMAI | CTGCAG | 3 cut(s) | 733, 904, 3939 |
| BspMI | ACCTGC | 1 cut(s) | 2509 |
| BspQI | GCTCTTC | 1 cut(s) | 1992 |
| BspT104I | TTCGAA | 1 cut(s) | 4196 |
| BspT107I | GGYRCC | 4 cut(s) | 15, 1820, 2591, 4381 |
| BspTNI | GGTCTC | 1 cut(s) | 4138 |
| BsrBI | CCGCTC | 1 cut(s) | 829 |
| BsrDI | GCAATG | 6 cut(s) | 1894, 2025, 2404, 2605, 3794, 3859 |
| BsrGI | TGTACA | 1 cut(s) | 4226 |
| BsrI | ACTGG | 7 cut(s) | 332, 804, 1161, 1398, 1953, 3000, 3342 |
| BssNI | GRCGYC | 2 cut(s) | 102, 126 |
| BssT1I | CCWWGG | 8 cut(s) | 108, 1017, 1597, 2150, 2668, 3450, 3558, 4389 |
| Bst2UI | CCWGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| Bst6I | CTCTTC | 5 cut(s) | 1357, 1992, 2325, 2343, 2841 |
| BstACI | GRCGYC | 2 cut(s) | 102, 126 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 4417, 4615 |
| BstAUI | TGTACA | 1 cut(s) | 4226 |
| BstBAI | YACGTR | 1 cut(s) | 1180 |
| BstBI | TTCGAA | 1 cut(s) | 4196 |
| BstC8I | GCNNGC | 4 cut(s) | 3240, 3664, 3822, 4872 |
| BstDSI | CCRYGG | 8 cut(s) | 108, 217, 367, 1597, 2150, 3450, 3558, 4389 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 4086 |
| BstFNI | CGCG | 2 cut(s) | 13, 234 |
| BstHHI | GCGC | 1 cut(s) | 663 |
| BstMAI | GTCTC | 7 cut(s) | 366, 770, 915, 2149, 3267, 3572, 4138 |
| BstMCI | CGRYCG | 1 cut(s) | 3314 |
| BstNI | CCWGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| BstNSI | RCATGY | 9 cut(s) | 471, 632, 1307, 1509, 2243, 2279, 3585, 3815, 4502 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2240, 2276 |
| BstSCI | CCNGG | 8 cut(s) | 1749, 2179, 2587, 3036, 3666, 4213, 4471, 4971 |
| BstSFI | CTRYAG | 8 cut(s) | 729, 900, 1992, 2100, 2430, 2631, 3935, 4587 |
| BstUI | CGCG | 2 cut(s) | 13, 234 |
| BstV1I | GCAGC | 9 cut(s) | 148, 1472, 2014, 2527, 2728, 3286, 3949, 4414, 4735 |
| BstV2I | GAAGAC | 3 cut(s) | 1119, 3621, 4401 |
| BstX2I | RGATCY | 5 cut(s) | 555, 725, 2354, 2722, 4710 |
| BstYI | RGATCY | 5 cut(s) | 555, 725, 2354, 2722, 4710 |
| BsuI | GTATCC | 3 cut(s) | 1133, 1207, 1495 |
| BsuRI | GGCC | 8 cut(s) | 44, 89, 216, 2208, 2667, 3666, 4011, 4758 |
| BtgI | CCRYGG | 8 cut(s) | 108, 217, 367, 1597, 2150, 3450, 3558, 4389 |
| BtgZI | GCGATG | 1 cut(s) | 2481 |
| BtsI | GCAGTG | 1 cut(s) | 1135 |
| BtsIMutI | CAGTG | 9 cut(s) | 483, 685, 1135, 1168, 1479, 3878, 4218, 4571, 4707 |
| BveI | ACCTGC | 1 cut(s) | 2509 |
| Cac8I | GCNNGC | 4 cut(s) | 3240, 3664, 3822, 4872 |
| CaiI | CAGNNNCTG | 6 cut(s) | 358, 1283, 3191, 3880, 4220, 4478 |
| CciI | TCATGA | 2 cut(s) | 175, 1722 |
| CfoI | GCGC | 1 cut(s) | 663 |
| Cfr13I | GGNCC | 4 cut(s) | 1631, 2287, 3998, 4009 |
| CseI | GACGC | 6 cut(s) | 19, 91, 115, 122, 223, 2520 |
| Csp6I | GTAC | 9 cut(s) | 16, 34, 2480, 2699, 3372, 3480, 4227, 4316, 4469 |
| CviQI | GTAC | 9 cut(s) | 16, 34, 2480, 2699, 3372, 3480, 4227, 4316, 4469 |
| DraI | TTTAAA | 3 cut(s) | 474, 502, 3684 |
| DraIII | CACNNNGTG | 1 cut(s) | 1922 |
| EaeI | YGGCCR | 2 cut(s) | 42, 4756 |
| Eam1104I | CTCTTC | 5 cut(s) | 1357, 1992, 2325, 2343, 2841 |
| EarI | CTCTTC | 5 cut(s) | 1357, 1992, 2325, 2343, 2841 |
| EciI | GGCGGA | 1 cut(s) | 4958 |
| Ecl136II | GAGCTC | 2 cut(s) | 55, 843 |
| Eco130I | CCWWGG | 8 cut(s) | 108, 1017, 1597, 2150, 2668, 3450, 3558, 4389 |
| Eco147I | AGGCCT | 2 cut(s) | 89, 2667 |
| Eco24I | GRGCYC | 3 cut(s) | 57, 845, 998 |
| Eco31I | GGTCTC | 1 cut(s) | 4138 |
| Eco32I | GATATC | 2 cut(s) | 3435, 3543 |
| Eco47I | GGWCC | 3 cut(s) | 1631, 2287, 3998 |
| Eco53kI | GAGCTC | 2 cut(s) | 55, 843 |
| EcoICRI | GAGCTC | 2 cut(s) | 55, 843 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 4086 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1631 |
| EcoRI | GAATTC | 1 cut(s) | 4788 |
| EcoRII | CCWGG | 8 cut(s) | 1749, 2179, 2587, 3036, 3666, 4213, 4471, 4971 |
| EcoRV | GATATC | 2 cut(s) | 3435, 3543 |
| EcoT14I | CCWWGG | 8 cut(s) | 108, 1017, 1597, 2150, 2668, 3450, 3558, 4389 |
| EcoT38I | GRGCYC | 3 cut(s) | 57, 845, 998 |
| ErhI | CCWWGG | 8 cut(s) | 108, 1017, 1597, 2150, 2668, 3450, 3558, 4389 |
| Esp3I | CGTCTC | 2 cut(s) | 2149, 3267 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3616, 3648, 4542, 4574 |
| FaqI | GGGAC | 6 cut(s) | 1644, 1717, 2305, 3019, 3967, 4487 |
| FauI | CCCGC | 2 cut(s) | 834, 4033 |
| FauNDI | CATATG | 3 cut(s) | 1624, 2859, 3255 |
| FbaI | TGATCA | 2 cut(s) | 360, 3331 |
| FblI | GTMKAC | 2 cut(s) | 4448, 4815 |
| FriOI | GRGCYC | 3 cut(s) | 57, 845, 998 |
| GlaI | GCGC | 1 cut(s) | 662 |
| GsaI | CCCAGC | 2 cut(s) | 459, 465 |
| GsuI | CTGGAG | 6 cut(s) | 610, 674, 2160, 2202, 2571, 2769 |
| HaeIII | GGCC | 8 cut(s) | 44, 89, 216, 2208, 2667, 3666, 4011, 4758 |
| HapII | CCGG | 6 cut(s) | 50, 83, 914, 3317, 4292, 4670 |
| HgaI | GACGC | 6 cut(s) | 19, 91, 115, 122, 223, 2520 |
| HhaI | GCGC | 1 cut(s) | 663 |
| Hin1I | GRCGYC | 2 cut(s) | 102, 126 |
| Hin6I | GCGC | 1 cut(s) | 661 |
| HinP1I | GCGC | 1 cut(s) | 661 |
| HincII | GTYRAC | 6 cut(s) | 9, 325, 736, 1264, 2089, 3629 |
| HindII | GTYRAC | 6 cut(s) | 9, 325, 736, 1264, 2089, 3629 |
| HindIII | AAGCTT | 3 cut(s) | 1485, 1945, 4556 |
| HpaII | CCGG | 6 cut(s) | 50, 83, 914, 3317, 4292, 4670 |
| HphI | GGTGA | 9 cut(s) | 355, 611, 777, 1602, 1962, 2383, 3410, 3518, 4151 |
| Hpy99I | CGWCG | 3 cut(s) | 107, 125, 696 |
| HpyCH4IV | ACGT | 3 cut(s) | 612, 1179, 2158 |
| HpySE526I | ACGT | 3 cut(s) | 612, 1179, 2158 |
| Hsp92I | GRCGYC | 2 cut(s) | 102, 126 |
| HspAI | GCGC | 1 cut(s) | 661 |
| Kpn2I | TCCGGA | 3 cut(s) | 49, 82, 913 |
| KpnI | GGTACC | 1 cut(s) | 19 |
| Ksp22I | TGATCA | 2 cut(s) | 360, 3331 |
| LguI | GCTCTTC | 1 cut(s) | 1992 |
| Lsp1109I | GCAGC | 9 cut(s) | 148, 1472, 2014, 2527, 2728, 3286, 3949, 4414, 4735 |
| MaeII | ACGT | 3 cut(s) | 612, 1179, 2158 |
| MbiI | CCGCTC | 1 cut(s) | 829 |
| MflI | RGATCY | 5 cut(s) | 555, 725, 2354, 2722, 4710 |
| MhlI | GDGCHC | 4 cut(s) | 57, 418, 845, 998 |
| MlsI | TGGCCA | 1 cut(s) | 4758 |
| MluNI | TGGCCA | 1 cut(s) | 4758 |
| MmeI | TCCRAC | 7 cut(s) | 262, 1089, 2477, 2678, 3210, 4534, 4991 |
| Mox20I | TGGCCA | 1 cut(s) | 4758 |
| MroI | TCCGGA | 3 cut(s) | 49, 82, 913 |
| MroXI | GAANNNNTTC | 7 cut(s) | 171, 2709, 2835, 3606, 3618, 4557, 4788 |
| MscI | TGGCCA | 1 cut(s) | 4758 |
| MslI | CAYNNNNRTG | 2 cut(s) | 720, 4373 |
| Msp20I | TGGCCA | 1 cut(s) | 4758 |
| MspI | CCGG | 6 cut(s) | 50, 83, 914, 3317, 4292, 4670 |
| MspR9I | CCNGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| Mva1269I | GAATGC | 5 cut(s) | 413, 663, 2129, 4101, 4487 |
| MvaI | CCWGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| MvnI | CGCG | 2 cut(s) | 13, 234 |
| NcoI | CCATGG | 6 cut(s) | 108, 1597, 2150, 3450, 3558, 4389 |
| NdeI | CATATG | 3 cut(s) | 1624, 2859, 3255 |
| NlaIV | GGNNCC | 6 cut(s) | 17, 1632, 1822, 2593, 3699, 4383 |
| NmeAIII | GCCGAG | 1 cut(s) | 178 |
| NmuCI | GTSAC | 7 cut(s) | 680, 1049, 1608, 3876, 4139, 4375, 4879 |
| NspI | RCATGY | 9 cut(s) | 471, 632, 1307, 1509, 2243, 2279, 3585, 3815, 4502 |
| NspV | TTCGAA | 1 cut(s) | 4196 |
| OliI | CACNNNNGTG | 1 cut(s) | 4373 |
| PagI | TCATGA | 2 cut(s) | 175, 1722 |
| PceI | AGGCCT | 2 cut(s) | 89, 2667 |
| PciI | ACATGT | 5 cut(s) | 1303, 1505, 2239, 2275, 4498 |
| PciSI | GCTCTTC | 1 cut(s) | 1992 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 42 |
| PctI | GAATGC | 5 cut(s) | 413, 663, 2129, 4101, 4487 |
| PdmI | GAANNNNTTC | 7 cut(s) | 171, 2709, 2835, 3606, 3618, 4557, 4788 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1598 |
| PfoI | TCCNGGA | 1 cut(s) | 2179 |
| Ppu21I | YACGTR | 1 cut(s) | 1180 |
| PpuMI | RGGWCCY | 1 cut(s) | 1631 |
| PscI | ACATGT | 5 cut(s) | 1303, 1505, 2239, 2275, 4498 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2240, 2276 |
| PsiI | TTATAA | 1 cut(s) | 2991 |
| Psp124BI | GAGCTC | 2 cut(s) | 57, 845 |
| Psp5II | RGGWCCY | 1 cut(s) | 1631 |
| Psp6I | CCWGG | 8 cut(s) | 1749, 2179, 2587, 3036, 3666, 4213, 4471, 4971 |
| PspFI | CCCAGC | 2 cut(s) | 455, 461 |
| PspGI | CCWGG | 8 cut(s) | 1749, 2179, 2587, 3036, 3666, 4213, 4471, 4971 |
| PspN4I | GGNNCC | 6 cut(s) | 17, 1632, 1822, 2593, 3699, 4383 |
| PspPI | GGNCC | 4 cut(s) | 1631, 2287, 3998, 4009 |
| PspPPI | RGGWCCY | 1 cut(s) | 1631 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 916, 948 |
| PstI | CTGCAG | 3 cut(s) | 733, 904, 3939 |
| PstNI | CAGNNNCTG | 6 cut(s) | 358, 1283, 3191, 3880, 4220, 4478 |
| PsuI | RGATCY | 5 cut(s) | 555, 725, 2354, 2722, 4710 |
| RsaI | GTAC | 9 cut(s) | 17, 35, 2481, 2700, 3373, 3481, 4228, 4317, 4470 |
| RsaNI | GTAC | 9 cut(s) | 16, 34, 2480, 2699, 3372, 3480, 4227, 4316, 4469 |
| RseI | CAYNNNNRTG | 2 cut(s) | 720, 4373 |
| SacI | GAGCTC | 2 cut(s) | 57, 845 |
| SapI | GCTCTTC | 1 cut(s) | 1992 |
| Sau96I | GGNCC | 4 cut(s) | 1631, 2287, 3998, 4009 |
| ScaI | AGTACT | 3 cut(s) | 2700, 3373, 3481 |
| ScrFI | CCNGG | 8 cut(s) | 1751, 2181, 2589, 3038, 3668, 4215, 4473, 4973 |
| SduI | GDGCHC | 4 cut(s) | 57, 418, 845, 998 |
| SfcI | CTRYAG | 8 cut(s) | 729, 900, 1992, 2100, 2430, 2631, 3935, 4587 |
| SfuI | TTCGAA | 1 cut(s) | 4196 |
| SinI | GGWCC | 3 cut(s) | 1631, 2287, 3998 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 720, 4373 |
| SmlI | CTYRAG | 4 cut(s) | 2164, 3749, 4105, 4310 |
| SmoI | CTYRAG | 4 cut(s) | 2164, 3749, 4105, 4310 |
| SseBI | AGGCCT | 2 cut(s) | 89, 2667 |
| SspI | AATATT | 1 cut(s) | 171 |
| SstI | GAGCTC | 2 cut(s) | 57, 845 |
| StuI | AGGCCT | 2 cut(s) | 89, 2667 |
| StyD4I | CCNGG | 8 cut(s) | 1749, 2179, 2587, 3036, 3666, 4213, 4471, 4971 |
| StyI | CCWWGG | 8 cut(s) | 108, 1017, 1597, 2150, 2668, 3450, 3558, 4389 |
| TaiI | ACGT | 3 cut(s) | 615, 1182, 2161 |
| TaqI | TCGA | 4 cut(s) | 96, 2645, 4196, 4332 |
| TatI | WGTACW | 5 cut(s) | 2479, 2698, 3371, 3479, 4226 |
| TauI | GCSGC | 2 cut(s) | 68, 1887 |
| TscAI | CASTG | 9 cut(s) | 490, 685, 1135, 1168, 1486, 3885, 4225, 4578, 4707 |
| TseFI | GTSAC | 7 cut(s) | 680, 1049, 1608, 3876, 4139, 4375, 4879 |
| TseI | GCWGC | 9 cut(s) | 161, 1460, 2002, 2540, 2741, 3299, 3937, 4402, 4748 |
| Tsp45I | GTSAC | 7 cut(s) | 680, 1049, 1608, 3876, 4139, 4375, 4879 |
| TspGWI | ACGGA | 5 cut(s) | 40, 480, 548, 1232, 3291 |
| TspRI | CASTG | 9 cut(s) | 490, 685, 1135, 1168, 1486, 3885, 4225, 4578, 4707 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1598 |
| VpaK11BI | GGWCC | 3 cut(s) | 1631, 2287, 3998 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 4086 |
| XbaI | TCTAGA | 1 cut(s) | 4493 |
| XceI | RCATGY | 9 cut(s) | 471, 632, 1307, 1509, 2243, 2279, 3585, 3815, 4502 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1072, 3786, 3992 |
| XmiI | GTMKAC | 2 cut(s) | 4448, 4815 |
| XmnI | GAANNNNTTC | 7 cut(s) | 171, 2709, 2835, 3606, 3618, 4557, 4788 |
| ZrmI | AGTACT | 3 cut(s) | 2700, 3373, 3481 |