Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0002522

Physical Location & Seq

Genomic Coordinates Reverse (-)

22039552 .. 22043238

Gene Structure 3687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1107700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGGCGTGCGTGAAGCTGGGATCCAAATCTGAAGTCTTCTTCCTTGATGGCAAAACTTGGCTTTGCTCAACTGGACTTGCTAGTGACGTCATAGTTGAAGTTGGAGAAACGTCTTTCCATCTCCACAAGTTTCCATTGCTATCGAGAAGCGGATTACTAGACAACATTATTGGAGAACTTCCTAGCGAGGATGAGCAAAAAGGCATAGTGCAACTGCATGACATTCCAGGTGGAGCCAAAATTTTCTTGCTGGTAGCCAAATTTTGTTACGGTGTAAGAATGGAACTCAACGCATTGAATGTAGTAAGTGTGAGGTGCGCTGCTGAGTATCTTCGTATGAGTGAAGAATACAGTGAGGGAAACCTCATCACGCAAGCGGAGGATTTTCTAAACGAAATCTTCAGCAATTGGAGCGACTCAATTAAAGCACTCGAAACCTGCGAAGAGGTCTTGCCTCATGCCGAAGAGCTTCATCTTGTTTCGAGATGCATCAATTCATTGGCAATGAAAGCGAGTGCCGATCCAGGTTTATTTAGTTGGCCTGTGACGGGAAAGGATGCCGTGCAGAGCTCAGAGGGTGTGGTGTTTTGGAATGGAATATGCACGACAGCAAAGCCACACCCGGTCAGCGAAGATTGGTGGTATGAAGATGTCTCATTCCTGAAGTATCCATTTTTCAAAAGGCTGATTCGAGCAGTTGAAATAGGAGGCATGAAGCCAGAGAGGAAGGCTGGCTCAATAATGCACTACGCAAAGAGGCATCTTTCCTTGTTGGGCAGGCAATCAAGTTTCCATAATGGAAATCGTGTTGCCCCGTTATCAACTGTTCCTGCTGCATCTGATGGAGACCAAAGGACTCTCCTTGAGGAGATTGTGGGATTACTTCCTGATCAGAAGGGCGTTACGCCAACCAACTTCCTGCTTAGGCTTCTCCGAACATCTATGATTTTGCAAGCTAGTGCATCATGTCTCGAGAGCTTAGAGAAACGAGTTGGTGCTCAATTGGATCAAGCAGCTCTTGAAGATCTTCTGATACCAAACATGGGGTACTCAGTGGAGACCCTATATGATATTGACTGCGTTCAGCGGATTCTTGACCACTTCATGCTCATGGACCGCGATTCAATTAATTATACTTCTAGCTCTATTGTTGATGAGGGCCAGCTGATCGGCTCTTCTCAACCGCTGACTGCAATAACCTCGGTGGCAAACCTGGTGGATGGATATCTTGCTGAAGTTGCACCTGATGTTAACTTGAAACTGCAGAAATTTCAGTCACTAGCTGCTGCTATCCCGGAATATGCCAGACCATTAGATGATGGAATTTATCGTGCTATCGATGTATACCTCAAGGCCCATCCTTGGCTGACAGACTCCGAGAAGGAACAAATCTGCCGGCTTATGAACTGCCAGAAGCTCTCATTGGAAGCCAGCACGCACGCAGCGCAAAATGAGAGGCTGCCACTTCGCGTCATTGTCCAAGTTCTGTTCTTCGAACAGCTTCGCCTGCGCACATCAATTGCCGGCTGGTTCTTTGCATCTGACAACCTCGAGAACTCACAAACCCAAAGTGGAAATCTTGCGCTTGCTCGAACTGAGGCACCTACTCAAGCTGGCACTACGCGCGATCATGTTGCAACAGTTGACATGAGAGAACGAGTTTTGGAGCTTGAGAAAGAGTGCTTGAGCATGAAGCAAGAGATTGGGAAGCTGGTGAAGACAAAGGGGAGTTGGAACACATTCTTGAAGAGGTTTGGCTTGAGGCTCAAGTCAAAAGCTAATGCAAAAAAAACACCCAAACCCTGCAAACAAAATTATGAATATAATCGATTAAGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

614

Amino Acids

68.46

Weight (kDa)

5.82

Isoelectric Point (pI)

37.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	25 - 115	3.1e-06	BTB/POZ domain
NPH3	PF03000	212 - 478	4.6e-94	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03250 AT5G03250
fragaria_vesca	FvH4_6g16010 FvH4_7g19310 FvH4_7g19310 FvH4_7g19310
malus_domestica	MD01G1107700.v1.1 MD04G1096800.v1.1 MD07G1173300.v1.1
prunus_persica	Prupe.2G212500_v2.0.a1 Prupe.6G236100_v2.0.a1
pyrus_communis	pycom01g13460 pycom04g09190 pycom07g16800 pycom12g11690
rosa_chinensis	RchiOBHm_Chr1g0363191 RchiOBHm_Chr3g0469731
rosa_laevigata	RLG00000024326 RLG00000027585
rosa_multiflora	Rmu_sc0002925.1_g000004 Rmu_sc0010644.1_g000001 Rmu_sc0022819.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293390 Rroxscaffold_6G00411520
rosa_rugosa	Rorug01G0305300 Rorug03G0103400 Rorug03G0103500 Rorug03G0103600 Rorug03G0103700 Rorug03G0103800 Rorug03G0103800
rosa_samantha	Rh1AG314100 Rh1BG277600 Rh1CG294000 Rh1DG308300 Rh3AG153200 Rh3BG177200 Rh3CG168100 Rh3DG198400
rosa_wichuraiana	Rw1G027830 Rw3G014440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	90
Acc16I	TGCGCA	1 cut(s)	1511
Acc36I	ACCTGC	1 cut(s)	446
AccB1I	GGYRCC	1 cut(s)	1600
AccI	GTMKAC	1 cut(s)	1344
AccII	CGCG	4 cut(s)	1119, 1470, 1624, 1626
AciI	CCGC	5 cut(s)	150, 377, 1087, 1117, 1184
AclWI	GGATC	4 cut(s)	15, 28, 515, 1014
AcsI	RAATTY	4 cut(s)	240, 260, 1268, 1323
AcuI	CTGAAG	4 cut(s)	51, 385, 683, 1254
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	1 cut(s)	1049
AfiI	CCNNNNNNNGG	3 cut(s)	548, 1043, 1362
AgsI	TTSAA	8 cut(s)	98, 298, 679, 701, 1022, 1125, 1258, 1747
AjnI	CCWGG	3 cut(s)	226, 523, 1212
AjuI	GAANNNNNNNTTGG	2 cut(s)	1406, 1438
Alw21I	GWGCWC	2 cut(s)	572, 1000
Alw26I	GTCTC	4 cut(s)	658, 840, 974, 1052
AlwI	GGATC	4 cut(s)	15, 28, 515, 1014
Ama87I	CYCGRG	2 cut(s)	971, 1550
AoxI	GGCC	3 cut(s)	539, 1159, 1353
ApeKI	GCWGC	7 cut(s)	320, 833, 1013, 1283, 1286, 1442, 1459
ApoI	RAATTY	4 cut(s)	240, 260, 1268, 1323
ArsI	GACNNNNNNTTYG	2 cut(s)	18, 50
AseI	ATTAAT	1 cut(s)	1128
Asp700I	GAANNNNTTC	4 cut(s)	468, 1026, 1500, 1739
AspLEI	GCGC	5 cut(s)	320, 1447, 1512, 1585, 1626
AspS9I	GGNCC	3 cut(s)	1114, 1159, 1354
AsuC2I	CCSGG	2 cut(s)	623, 1295
AsuHPI	GGTGA	1 cut(s)	1726
AsuII	TTCGAA	1 cut(s)	1494
AvaI	CYCGRG	2 cut(s)	971, 1550
AvaII	GGWCC	1 cut(s)	1114
BamHI	GGATCC	1 cut(s)	20
BanI	GGYRCC	1 cut(s)	1600
BanII	GRGCYC	1 cut(s)	572
BbsI	GAAGAC	2 cut(s)	28, 1724
Bbv12I	GWGCWC	2 cut(s)	572, 1000
BbvI	GCAGC	7 cut(s)	307, 820, 1025, 1270, 1273, 1446, 1454
BccI	CCATC	6 cut(s)	41, 126, 836, 1214, 1313, 1365
BceAI	ACGGC	1 cut(s)	545
BcgI	CGANNNNNNTGC	4 cut(s)	1182, 1216, 1616, 1650
BciT130I	CCWGG	3 cut(s)	228, 525, 1214
BciVI	GTATCC	1 cut(s)	678
BclI	TGATCA	1 cut(s)	889
BcnI	CCSGG	2 cut(s)	623, 1295
BcoDI	GTCTC	4 cut(s)	658, 840, 974, 1052
BfaI	CTAG	6 cut(s)	81, 158, 183, 957, 1140, 1280
BfmI	CTRYAG	1 cut(s)	1262
BfuAI	ACCTGC	1 cut(s)	446
BfuI	GTATCC	1 cut(s)	678
BglII	AGATCT	1 cut(s)	1024
BisI	GCNGC	7 cut(s)	321, 834, 1014, 1284, 1287, 1443, 1460
BlsI	GCNGC	7 cut(s)	322, 835, 1015, 1285, 1288, 1444, 1461
Bme1390I	CCNGG	5 cut(s)	228, 525, 623, 1214, 1295
Bme18I	GGWCC	1 cut(s)	1114
BmeT110I	CYCGRG	2 cut(s)	971, 1550
BmgT120I	GGNCC	3 cut(s)	1114, 1159, 1354
BmiI	GGNNCC	3 cut(s)	22, 235, 1602
BmrFI	CCNGG	5 cut(s)	228, 525, 623, 1214, 1295
BmsI	GCATC	7 cut(s)	476, 498, 547, 769, 845, 971, 1547
BpiI	GAAGAC	2 cut(s)	28, 1724
Bpu10I	CCTNAGC	1 cut(s)	923
Bpu14I	TTCGAA	1 cut(s)	1494
BpuEI	CTTGAG	7 cut(s)	884, 1334, 1593, 1691, 1705, 1751, 1780
BpuMI	CCSGG	2 cut(s)	623, 1295
Bsa29I	ATCGAT	2 cut(s)	1338, 1828
BsaBI	GATNNNNATC	2 cut(s)	25, 1224
BsaHI	GRCGYC	1 cut(s)	87
BsaI	GGTCTC	2 cut(s)	840, 1052
BsaJI	CCNNGG	2 cut(s)	1200, 1361
Bsc4I	CCNNNNNNNGG	3 cut(s)	548, 1043, 1362
Bse118I	RCCGGY	2 cut(s)	1395, 1523
Bse1I	ACTGG	1 cut(s)	76
Bse3DI	GCAATG	2 cut(s)	134, 510
Bse8I	GATNNNNATC	2 cut(s)	25, 1224
BseBI	CCWGG	3 cut(s)	228, 525, 1214
BseCI	ATCGAT	2 cut(s)	1338, 1828
BseDI	CCNNGG	2 cut(s)	1200, 1361
BseGI	GGATG	4 cut(s)	196, 562, 1225, 1357
BseJI	GATNNNNATC	2 cut(s)	25, 1224
BseLI	CCNNNNNNNGG	3 cut(s)	548, 1043, 1362
BseMI	GCAATG	2 cut(s)	134, 510
BseMII	CTCAG	4 cut(s)	315, 585, 1065, 1587
BseNI	ACTGG	1 cut(s)	76
BseRI	GAGGAG	1 cut(s)	881
BseXI	GCAGC	7 cut(s)	307, 820, 1025, 1270, 1273, 1446, 1454
BseYI	CCCAGC	1 cut(s)	16
BsgI	GTGCAG	1 cut(s)	584
Bsh1236I	CGCG	4 cut(s)	1119, 1470, 1624, 1626
BshFI	GGCC	3 cut(s)	541, 1161, 1355
BshNI	GGYRCC	1 cut(s)	1600
BshVI	ATCGAT	2 cut(s)	1338, 1828
BsiHKAI	GWGCWC	2 cut(s)	572, 1000
BsiHKCI	CYCGRG	2 cut(s)	971, 1550
BsiSI	CCGG	4 cut(s)	623, 1295, 1396, 1524
BslI	CCNNNNNNNGG	3 cut(s)	548, 1043, 1362
BsmAI	GTCTC	4 cut(s)	658, 840, 974, 1052
BsnI	GGCC	3 cut(s)	541, 1161, 1355
Bso31I	GGTCTC	2 cut(s)	840, 1052
BsoBI	CYCGRG	2 cut(s)	971, 1550
Bsp119I	TTCGAA	1 cut(s)	1494
Bsp1286I	GDGCHC	2 cut(s)	572, 1000
Bsp143I	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
BspACI	CCGC	5 cut(s)	150, 377, 1087, 1117, 1184
BspANI	GGCC	3 cut(s)	541, 1161, 1355
BspCNI	CTCAG	4 cut(s)	316, 584, 1064, 1588
BspDI	ATCGAT	2 cut(s)	1338, 1828
BspFNI	CGCG	4 cut(s)	1119, 1470, 1624, 1626
BspLI	GGNNCC	3 cut(s)	22, 235, 1602
BspMAI	CTGCAG	1 cut(s)	1266
BspMI	ACCTGC	1 cut(s)	446
BspPI	GGATC	4 cut(s)	15, 28, 515, 1014
BspQI	GCTCTTC	2 cut(s)	459, 1180
BspT104I	TTCGAA	1 cut(s)	1494
BspT107I	GGYRCC	1 cut(s)	1600
BspTNI	GGTCTC	2 cut(s)	840, 1052
BsrDI	GCAATG	2 cut(s)	134, 510
BsrFI	RCCGGY	2 cut(s)	1395, 1523
BsrI	ACTGG	1 cut(s)	76
BssAI	RCCGGY	2 cut(s)	1395, 1523
BssECI	CCNNGG	2 cut(s)	1200, 1361
BssMI	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
BssNAI	GTATAC	1 cut(s)	1345
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	1 cut(s)	1361
Bst1107I	GTATAC	1 cut(s)	1345
Bst2UI	CCWGG	3 cut(s)	228, 525, 1214
Bst4CI	ACNGT	4 cut(s)	272, 353, 826, 1642
Bst6I	CTCTTC	4 cut(s)	438, 459, 1180, 1742
BstACI	GRCGYC	1 cut(s)	87
BstBI	TTCGAA	1 cut(s)	1494
BstDEI	CTNAG	6 cut(s)	324, 571, 923, 979, 1051, 1596
BstF5I	GGATG	4 cut(s)	196, 562, 1225, 1357
BstFNI	CGCG	4 cut(s)	1119, 1470, 1624, 1626
BstHHI	GCGC	5 cut(s)	320, 1447, 1512, 1585, 1626
BstKTI	GATC	7 cut(s)	23, 523, 892, 1009, 1027, 1170, 1630
BstMAI	GTCTC	4 cut(s)	658, 840, 974, 1052
BstMBI	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
BstMWI	GCNNNNNNNGC	6 cut(s)	411, 509, 1238, 1444, 1507, 1623
BstNI	CCWGG	3 cut(s)	228, 525, 1214
BstSCI	CCNGG	5 cut(s)	226, 523, 621, 1212, 1293
BstSFI	CTRYAG	1 cut(s)	1262
BstUI	CGCG	4 cut(s)	1119, 1470, 1624, 1626
BstV1I	GCAGC	7 cut(s)	307, 820, 1025, 1270, 1273, 1446, 1454
BstV2I	GAAGAC	2 cut(s)	28, 1724
BstX2I	RGATCY	2 cut(s)	20, 1024
BstYI	RGATCY	2 cut(s)	20, 1024
BstZ17I	GTATAC	1 cut(s)	1345
Bsu15I	ATCGAT	2 cut(s)	1338, 1828
BsuI	GTATCC	1 cut(s)	678
BsuRI	GGCC	3 cut(s)	541, 1161, 1355
BsuTUI	ATCGAT	2 cut(s)	1338, 1828
BtsCI	GGATG	4 cut(s)	196, 562, 1225, 1357
BtsIMutI	CAGTG	2 cut(s)	358, 1059
BveI	ACCTGC	1 cut(s)	446
CfoI	GCGC	5 cut(s)	320, 1447, 1512, 1585, 1626
Cfr10I	RCCGGY	2 cut(s)	1395, 1523
Cfr13I	GGNCC	3 cut(s)	1114, 1159, 1354
ClaI	ATCGAT	2 cut(s)	1338, 1828
CseI	GACGC	1 cut(s)	1459
CsiI	ACCWGGT	1 cut(s)	1212
Csp6I	GTAC	1 cut(s)	1048
CspCI	CAANNNNNGTGG	2 cut(s)	1197, 1232
CviQI	GTAC	1 cut(s)	1048
DdeI	CTNAG	6 cut(s)	324, 571, 923, 979, 1051, 1596
DpnI	GATC	7 cut(s)	22, 522, 891, 1008, 1026, 1169, 1629
DpnII	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
Eam1104I	CTCTTC	4 cut(s)	438, 459, 1180, 1742
EarI	CTCTTC	4 cut(s)	438, 459, 1180, 1742
Ecl136II	GAGCTC	1 cut(s)	570
Eco130I	CCWWGG	1 cut(s)	1361
Eco24I	GRGCYC	1 cut(s)	572
Eco31I	GGTCTC	2 cut(s)	840, 1052
Eco32I	GATATC	1 cut(s)	1226
Eco47I	GGWCC	1 cut(s)	1114
Eco53kI	GAGCTC	1 cut(s)	570
Eco57I	CTGAAG	4 cut(s)	51, 385, 683, 1254
Eco88I	CYCGRG	2 cut(s)	971, 1550
EcoICRI	GAGCTC	1 cut(s)	570
EcoRII	CCWGG	3 cut(s)	226, 523, 1212
EcoRV	GATATC	1 cut(s)	1226
EcoT14I	CCWWGG	1 cut(s)	1361
EcoT22I	ATGCAT	1 cut(s)	491
EcoT38I	GRGCYC	1 cut(s)	572
ErhI	CCWWGG	1 cut(s)	1361
FalI	AAGNNNNNCTT	2 cut(s)	1002, 1034
FbaI	TGATCA	1 cut(s)	889
FblI	GTMKAC	1 cut(s)	1344
Fnu4HI	GCNGC	7 cut(s)	321, 834, 1014, 1284, 1287, 1443, 1460
FokI	GGATG	4 cut(s)	203, 569, 1232, 1344
FriOI	GRGCYC	1 cut(s)	572
Fsp4HI	GCNGC	7 cut(s)	321, 834, 1014, 1284, 1287, 1443, 1460
FspBI	CTAG	6 cut(s)	81, 158, 183, 957, 1140, 1280
FspI	TGCGCA	1 cut(s)	1511
GlaI	GCGC	5 cut(s)	319, 1446, 1511, 1584, 1625
GluI	GCNGC	7 cut(s)	321, 834, 1014, 1284, 1287, 1443, 1460
GsaI	CCCAGC	1 cut(s)	20
HaeIII	GGCC	3 cut(s)	541, 1161, 1355
HapII	CCGG	4 cut(s)	623, 1295, 1396, 1524
HgaI	GACGC	1 cut(s)	1459
HhaI	GCGC	5 cut(s)	320, 1447, 1512, 1585, 1626
Hin1I	GRCGYC	1 cut(s)	87
Hin6I	GCGC	5 cut(s)	318, 1445, 1510, 1583, 1624
HinP1I	GCGC	5 cut(s)	318, 1445, 1510, 1583, 1624
HincII	GTYRAC	2 cut(s)	1252, 1645
HindII	GTYRAC	2 cut(s)	1252, 1645
HinfI	GANTC	6 cut(s)	416, 688, 856, 1090, 1121, 1373
HpaI	GTTAAC	1 cut(s)	1252
HpaII	CCGG	4 cut(s)	623, 1295, 1396, 1524
HphI	GGTGA	1 cut(s)	1726
Hpy166II	GTNNAC	3 cut(s)	1252, 1345, 1645
Hpy188I	TCNGA	8 cut(s)	31, 574, 841, 894, 935, 1032, 1378, 1543
Hpy8I	GTNNAC	3 cut(s)	1252, 1345, 1645
HpyAV	CCTTC	3 cut(s)	721, 889, 1375
HpyCH4III	ACNGT	4 cut(s)	272, 353, 826, 1642
HpyCH4IV	ACGT	2 cut(s)	87, 110
HpyF10VI	GCNNNNNNNGC	6 cut(s)	411, 509, 1238, 1444, 1507, 1623
HpyF3I	CTNAG	6 cut(s)	324, 571, 923, 979, 1051, 1596
HpySE526I	ACGT	2 cut(s)	87, 110
Hsp92I	GRCGYC	1 cut(s)	87
HspAI	GCGC	5 cut(s)	318, 1445, 1510, 1583, 1624
KroI	GCCGGC	2 cut(s)	1395, 1523
KroNI	GCCGGC	2 cut(s)	1397, 1525
Ksp22I	TGATCA	1 cut(s)	889
KspAI	GTTAAC	1 cut(s)	1252
Kzo9I	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
LguI	GCTCTTC	2 cut(s)	459, 1180
LmnI	GCTCC	3 cut(s)	233, 411, 1666
Lsp1109I	GCAGC	7 cut(s)	307, 820, 1025, 1270, 1273, 1446, 1454
LweI	GCATC	7 cut(s)	476, 498, 547, 769, 845, 971, 1547
MabI	ACCWGGT	1 cut(s)	1212
MaeI	CTAG	6 cut(s)	81, 158, 183, 957, 1140, 1280
MaeII	ACGT	2 cut(s)	87, 110
MaeIII	GTNAC	5 cut(s)	83, 266, 544, 901, 1275
MalI	GATC	7 cut(s)	22, 522, 891, 1008, 1026, 1169, 1629
MboI	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
MfeI	CAATTG	3 cut(s)	406, 1001, 1518
MflI	RGATCY	2 cut(s)	20, 1024
MhlI	GDGCHC	2 cut(s)	572, 1000
MlyI	GAGTC	3 cut(s)	410, 850, 1367
MmeI	TCCRAC	2 cut(s)	82, 1712
Mph1103I	ATGCAT	1 cut(s)	491
MroNI	GCCGGC	2 cut(s)	1395, 1523
MroXI	GAANNNNTTC	4 cut(s)	468, 1026, 1500, 1739
MseI	TTAA	4 cut(s)	423, 1128, 1251, 1832
MslI	CAYNNNNRTG	1 cut(s)	1109
MspA1I	CMGCKG	3 cut(s)	1087, 1165, 1186
MspI	CCGG	4 cut(s)	623, 1295, 1396, 1524
MspR9I	CCNGG	5 cut(s)	228, 525, 623, 1214, 1295
MunI	CAATTG	3 cut(s)	406, 1001, 1518
MvaI	CCWGG	3 cut(s)	228, 525, 1214
MvnI	CGCG	4 cut(s)	1119, 1470, 1624, 1626
MwoI	GCNNNNNNNGC	6 cut(s)	411, 509, 1238, 1444, 1507, 1623
NaeI	GCCGGC	2 cut(s)	1397, 1525
NciI	CCSGG	2 cut(s)	623, 1295
NdeII	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
NgoMIV	GCCGGC	2 cut(s)	1395, 1523
NlaIV	GGNNCC	3 cut(s)	22, 235, 1602
NmuCI	GTSAC	3 cut(s)	83, 544, 1275
NsbI	TGCGCA	1 cut(s)	1511
NsiI	ATGCAT	1 cut(s)	491
NspV	TTCGAA	1 cut(s)	1494
PaeR7I	CTCGAG	2 cut(s)	971, 1550
PciSI	GCTCTTC	2 cut(s)	459, 1180
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PdiI	GCCGGC	2 cut(s)	1397, 1525
PdmI	GAANNNNTTC	4 cut(s)	468, 1026, 1500, 1739
PfeI	GAWTC	3 cut(s)	688, 1090, 1121
PfoI	TCCNGGA	1 cut(s)	1293
PkrI	GCNGC	7 cut(s)	322, 835, 1015, 1285, 1288, 1444, 1461
PleI	GAGTC	3 cut(s)	410, 850, 1367
PpsI	GAGTC	3 cut(s)	410, 850, 1367
PshBI	ATTAAT	1 cut(s)	1128
Psp124BI	GAGCTC	1 cut(s)	572
Psp6I	CCWGG	3 cut(s)	226, 523, 1212
PspFI	CCCAGC	1 cut(s)	16
PspGI	CCWGG	3 cut(s)	226, 523, 1212
PspN4I	GGNNCC	3 cut(s)	22, 235, 1602
PspPI	GGNCC	3 cut(s)	1114, 1159, 1354
PstI	CTGCAG	1 cut(s)	1266
PsuI	RGATCY	2 cut(s)	20, 1024
PvuII	CAGCTG	1 cut(s)	1165
RsaI	GTAC	1 cut(s)	1049
RsaNI	GTAC	1 cut(s)	1048
RseI	CAYNNNNRTG	1 cut(s)	1109
SacI	GAGCTC	1 cut(s)	572
SapI	GCTCTTC	2 cut(s)	459, 1180
SaqAI	TTAA	4 cut(s)	423, 1128, 1251, 1832
SatI	GCNGC	7 cut(s)	321, 834, 1014, 1284, 1287, 1443, 1460
Sau3AI	GATC	7 cut(s)	20, 520, 889, 1006, 1024, 1167, 1627
Sau96I	GGNCC	3 cut(s)	1114, 1159, 1354
SchI	GAGTC	3 cut(s)	410, 850, 1367
ScrFI	CCNGG	5 cut(s)	228, 525, 623, 1214, 1295
SduI	GDGCHC	2 cut(s)	572, 1000
SexAI	ACCWGGT	1 cut(s)	1212
SfaNI	GCATC	7 cut(s)	476, 498, 547, 769, 845, 971, 1547
SfcI	CTRYAG	1 cut(s)	1262
Sfr274I	CTCGAG	2 cut(s)	971, 1550
SfuI	TTCGAA	1 cut(s)	1494
SinI	GGWCC	1 cut(s)	1114
SlaI	CTCGAG	2 cut(s)	971, 1550
SmiMI	CAYNNNNRTG	1 cut(s)	1109
SmlI	CTYRAG	9 cut(s)	863, 971, 1349, 1550, 1608, 1670, 1684, 1759, 1766
SmoI	CTYRAG	9 cut(s)	863, 971, 1349, 1550, 1608, 1670, 1684, 1759, 1766
SsiI	CCGC	5 cut(s)	150, 377, 1087, 1117, 1184
SspMI	CTAG	6 cut(s)	81, 158, 183, 957, 1140, 1280
SstI	GAGCTC	1 cut(s)	572
StyD4I	CCNGG	5 cut(s)	226, 523, 621, 1212, 1293
StyI	CCWWGG	1 cut(s)	1361
TaaI	ACNGT	4 cut(s)	272, 353, 826, 1642
TaiI	ACGT	2 cut(s)	90, 113
TfiI	GAWTC	3 cut(s)	688, 1090, 1121
Tru1I	TTAA	4 cut(s)	423, 1128, 1251, 1832
Tru9I	TTAA	4 cut(s)	423, 1128, 1251, 1832
TscAI	CASTG	2 cut(s)	358, 1059
TseFI	GTSAC	3 cut(s)	83, 544, 1275
TseI	GCWGC	7 cut(s)	320, 833, 1013, 1283, 1286, 1442, 1459
Tsp45I	GTSAC	3 cut(s)	83, 544, 1275
TspDTI	ATGAA	9 cut(s)	461, 486, 521, 660, 728, 1093, 1418, 1706, 1833
TspRI	CASTG	2 cut(s)	358, 1059
VpaK11BI	GGWCC	1 cut(s)	1114
VspI	ATTAAT	1 cut(s)	1128
XapI	RAATTY	4 cut(s)	240, 260, 1268, 1323
XhoI	CTCGAG	2 cut(s)	971, 1550
XmiI	GTMKAC	1 cut(s)	1344
XmnI	GAANNNNTTC	4 cut(s)	468, 1026, 1500, 1739
XspI	CTAG	6 cut(s)	81, 158, 183, 957, 1140, 1280
ZraI	GACGTC	1 cut(s)	88
Zsp2I	ATGCAT	1 cut(s)	491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.