Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002522

Physical Location & Seq

Genomic Coordinates Reverse (-)

11591490 .. 11594341

Gene Structure 2852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g09190.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGCTTGCATGAAGCTTGGAGCTAAGTCTGAAGCATTCCATCGCGAAGGCCAAACTTGTGGGCTACTAGAGAGGCTTATCGAAGAGTGTTCTAGTGAGGAAGGATCTTCTTGTGCCTTGCAACTTCATGGTGTGCCCGGGGGAGCTAAAGCATTTGAGCTTGTAACCAAATTCTGCTATGGCGTCAAAATAGAACTGACTGCTATGAACGTAGTCATCCTTAGATGTGCAGCAGAATACCTCCAAATGACTGAAGATTACGAACAGGGAAATCTCATTGCGCAAACAGAGGTTTTCCTTACTGAAGTCTTCAGCAATTGGAGAGACTCCATAGTAGCTCTTGAAACATGTGAAGAAGTTCAACAATATGCCGAAGAGCTCCACATTGCTTCACGATGCATTGATTCCTTGGCTATCAAAGCTTGTGCAGATCCAAAGTTATTCAGTTGGCCTATATTATCAGGAGAAAATGACATGAAGAACCCAACAGCGTCATGGAACGGAATAACTTCTGATGATGCTAAGCCCCAACCTCTCGCTGATGATTGGTGGTATGAAGATGCATCCTTACTTAGCTTACCTCTCTATAAGCGATTGATTCAAGCTGTTGAATTGAAAGGAATGAGGCCTGAGAGTATTGCCGCTTCTCTCATATTCTATGTTAGAAAGTATCTCCCCTTGATGAATAGACAGTCGAGCTTTCATGACACAAATTATGTAAACTCAGGCACCACCATTTCTAACATTTCTGAGGCAGACCAGAGGGCTCTACTTGAAGATATCATGGGTTTACTTCCTCATAAGAAAGGAGTCACATCCTCCAAGTTTCTCCTTAGGCTGCTACGAACGGCTATGATCTTACATGCAAGTCCATCATGCAGAGAAAATTTGGAGAAAAGGGTAGGTGCCCAGTTGGACCAAGCCGTGCTCATAGATCTTCTCATACCAAATATGGGCTATTCTGTGGAGACTCTTTACGACATAGACTGCATTCAGAGGATTCTTGATCATTTCATGTCGGTAAACCAGGCTTCACTTGCATCATCTTCCCCATGCATAATCGAAGAGGGGCAACTAATGACTGGGATTGATCCACTGACACCTATTACTATGGTAGCCAGTCTGGTGGATGGATACCTTGCCGAGGTAGCGCCAGATGTTAATTTGAAGTTACCAAAATTTCAGGCACTTGCTGCTGTCATCCCTGAATATGCCCGGCCAGTGGATGATGGCATATATCATGCAATCGATGTTTTCTTGAAGGCACATCCTTGGCTTACAGATGCTGAAAGGGAGCAACTCTGCAGACTCATGAACTGCCAGAAGCTTTCTCTGGAAGCCAGTACGCATGCAGCTCAGAACGAGAGATTACCTCTTCGAGTAATTGTTCAAGTCCTTTTCTTTGAACAGCTTCGACTCCGCACGTCAATTTCTGGCTGGTTCTTCGTTGACAATCTTGAGAACTCACAAAATCCCAGCGTAAACCTTGGGCTCCCCGCCAAAAATGATGTGTCCGGTCAAGTGGACGCTCCACAAGACCAAGCTGTGGGTTTCGATCATCATGACATGAGGGAACGTGTATTAGAGCTTCAAAGGGAGTGTTCAAGCATGAAGAAGGAGCTCCAGAAGCTGGTCAAGACCAAGAGAAGTTGGAGCATCCTTCCCATAAGGTTAGGTTTTAGAAAAAAGTTGGAGCCTTGCAATCCGAAAGAATCGAAGCCCACAGATCGGATTCCGGTACCAACATCATGCTGCAATGGACAACAAACTCATGAAAACAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

595

Amino Acids

66.51

Weight (kDa)

5.3

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03250 AT5G03250
fragaria_vesca	FvH4_6g16010 FvH4_7g19310 FvH4_7g19310 FvH4_7g19310
malus_domestica	MD01G1107700.v1.1 MD04G1096800.v1.1 MD07G1173300.v1.1
prunus_persica	Prupe.2G212500_v2.0.a1 Prupe.6G236100_v2.0.a1
pyrus_communis	pycom01g13460 pycom04g09190 pycom07g16800 pycom12g11690
rosa_chinensis	RchiOBHm_Chr1g0363191 RchiOBHm_Chr3g0469731
rosa_laevigata	RLG00000024326 RLG00000027585
rosa_multiflora	Rmu_sc0002925.1_g000004 Rmu_sc0010644.1_g000001 Rmu_sc0022819.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293390 Rroxscaffold_6G00411520
rosa_rugosa	Rorug01G0305300 Rorug03G0103400 Rorug03G0103500 Rorug03G0103600 Rorug03G0103700 Rorug03G0103800 Rorug03G0103800
rosa_samantha	Rh1AG314100 Rh1BG277600 Rh1CG294000 Rh1DG308300 Rh3AG153200 Rh3BG177200 Rh3CG168100 Rh3DG198400
rosa_wichuraiana	Rw1G027830 Rw3G014440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	282
Acc65I	GGTACC	1 cut(s)	1738
AccB1I	GGYRCC	3 cut(s)	728, 905, 1738
AccB7I	CCANNNNNTGG	2 cut(s)	1546, 1630
AccII	CGCG	1 cut(s)	45
AciI	CCGC	3 cut(s)	642, 1420, 1497
AclWI	GGATC	3 cut(s)	112, 425, 1085
AcoI	YGGCCR	1 cut(s)	1217
AcsI	RAATTY	3 cut(s)	170, 886, 1178
AcuI	CTGAAG	4 cut(s)	51, 273, 295, 324
AcyI	GRCGYC	1 cut(s)	183
AfaI	GTAC	2 cut(s)	1345, 1740
AfiI	CCNNNNNNNGG	6 cut(s)	953, 1144, 1222, 1546, 1630, 1728
AflIII	ACRYGT	2 cut(s)	347, 1576
AjiI	CACGTC	1 cut(s)	1425
AjnI	CCWGG	1 cut(s)	1026
Alw21I	GWGCWC	3 cut(s)	381, 930, 1623
Alw26I	GTCTC	2 cut(s)	318, 962
AlwI	GGATC	3 cut(s)	112, 425, 1085
AlwNI	CAGNNNCTG	2 cut(s)	1286, 1630
Ama87I	CYCGRG	1 cut(s)	137
AoxI	GGCC	4 cut(s)	49, 449, 626, 1217
ApeKI	GCWGC	5 cut(s)	230, 838, 1193, 1352, 1752
ApoI	RAATTY	3 cut(s)	170, 886, 1178
Asp700I	GAANNNNTTC	3 cut(s)	357, 508, 1410
Asp718I	GGTACC	1 cut(s)	1738
AspLEI	GCGC	2 cut(s)	283, 1153
AspS9I	GGNCC	1 cut(s)	916
AsuC2I	CCSGG	3 cut(s)	138, 139, 1216
AvaI	CYCGRG	1 cut(s)	137
AvaII	GGWCC	1 cut(s)	916
AxyI	CCTNAGG	1 cut(s)	833
BaeGI	GKGCMC	2 cut(s)	138, 910
BanI	GGYRCC	3 cut(s)	728, 905, 1738
BanII	GRGCYC	4 cut(s)	381, 769, 1494, 1623
BarI	GAAGNNNNNNTAC	4 cut(s)	628, 660, 1572, 1604
BbsI	GAAGAC	1 cut(s)	301
Bbv12I	GWGCWC	3 cut(s)	381, 930, 1623
BbvI	GCAGC	5 cut(s)	242, 825, 1180, 1364, 1739
BccI	CCATC	4 cut(s)	48, 880, 1124, 1223
BceAI	ACGGC	2 cut(s)	864, 908
BciT130I	CCWGG	1 cut(s)	1028
BciVI	GTATCC	1 cut(s)	1127
BclI	TGATCA	1 cut(s)	1006
BcnI	CCSGG	3 cut(s)	138, 139, 1216
BcoDI	GTCTC	2 cut(s)	318, 962
BfaI	CTAG	3 cut(s)	68, 93, 1783
BfmI	CTRYAG	1 cut(s)	1303
BfoI	RGCGCY	1 cut(s)	1154
BfuI	GTATCC	1 cut(s)	1127
BglII	AGATCT	1 cut(s)	934
BisI	GCNGC	6 cut(s)	231, 642, 839, 1194, 1353, 1753
BlpI	GCTNAGC	1 cut(s)	522
BlsI	GCNGC	6 cut(s)	232, 643, 840, 1195, 1354, 1754
Bme1390I	CCNGG	4 cut(s)	138, 139, 1028, 1216
Bme18I	GGWCC	1 cut(s)	916
BmeT110I	CYCGRG	1 cut(s)	137
BmgBI	CACGTC	1 cut(s)	1425
BmgT120I	GGNCC	1 cut(s)	916
BmiI	GGNNCC	5 cut(s)	730, 907, 1493, 1695, 1740
BmrFI	CCNGG	4 cut(s)	138, 139, 1028, 1216
BmrI	ACTGGG	2 cut(s)	904, 1092
BmsI	GCATC	7 cut(s)	386, 508, 550, 572, 1049, 1273, 1665
BmuI	ACTGGG	2 cut(s)	904, 1092
BpiI	GAAGAC	1 cut(s)	301
BplI	GAGNNNNNCTC	2 cut(s)	1357, 1389
BpmI	CTGGAG	1 cut(s)	1607
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuEI	CTTGAG	1 cut(s)	1478
BpuMI	CCSGG	3 cut(s)	138, 139, 1216
Bsa29I	ATCGAT	1 cut(s)	1248
BsaHI	GRCGYC	1 cut(s)	183
BsaJI	CCNNGG	6 cut(s)	137, 138, 408, 1143, 1271, 1486
BsaWI	WCCGGW	2 cut(s)	1514, 1735
Bsc4I	CCNNNNNNNGG	6 cut(s)	953, 1144, 1222, 1546, 1630, 1728
Bse1I	ACTGG	5 cut(s)	910, 1087, 1119, 1220, 1341
Bse21I	CCTNAGG	1 cut(s)	833
Bse3DI	GCAATG	3 cut(s)	276, 384, 1762
BseBI	CCWGG	1 cut(s)	1028
BseCI	ATCGAT	1 cut(s)	1248
BseDI	CCNNGG	6 cut(s)	137, 138, 408, 1143, 1271, 1486
BseGI	GGATG	8 cut(s)	216, 563, 815, 1135, 1200, 1231, 1267, 1656
BseLI	CCNNNNNNNGG	6 cut(s)	953, 1144, 1222, 1546, 1630, 1728
BseMI	GCAATG	3 cut(s)	276, 384, 1762
BseMII	CTCAG	4 cut(s)	621, 738, 741, 1370
BseNI	ACTGG	5 cut(s)	910, 1087, 1119, 1220, 1341
BseSI	GKGCMC	2 cut(s)	138, 910
BseXI	GCAGC	5 cut(s)	242, 825, 1180, 1364, 1739
BseYI	CCCAGC	1 cut(s)	1475
BsgI	GTGCAG	2 cut(s)	249, 447
Bsh1236I	CGCG	1 cut(s)	45
BshFI	GGCC	4 cut(s)	51, 451, 628, 1219
BshNI	GGYRCC	3 cut(s)	728, 905, 1738
BshVI	ATCGAT	1 cut(s)	1248
BsiHKAI	GWGCWC	3 cut(s)	381, 930, 1623
BsiHKCI	CYCGRG	1 cut(s)	137
BsiSI	CCGG	4 cut(s)	138, 1216, 1515, 1736
BslI	CCNNNNNNNGG	6 cut(s)	953, 1144, 1222, 1546, 1630, 1728
BsmAI	GTCTC	2 cut(s)	318, 962
BsmI	GAATGC	2 cut(s)	35, 990
BsnI	GGCC	4 cut(s)	51, 451, 628, 1219
BsoBI	CYCGRG	1 cut(s)	137
Bsp1286I	GDGCHC	7 cut(s)	138, 381, 769, 910, 930, 1494, 1623
Bsp143I	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
Bsp1720I	GCTNAGC	1 cut(s)	522
Bsp68I	TCGCGA	1 cut(s)	45
BspACI	CCGC	3 cut(s)	642, 1420, 1497
BspANI	GGCC	4 cut(s)	51, 451, 628, 1219
BspCNI	CTCAG	4 cut(s)	622, 737, 742, 1369
BspDI	ATCGAT	1 cut(s)	1248
BspFNI	CGCG	1 cut(s)	45
BspHI	TCATGA	4 cut(s)	703, 1311, 1561, 1771
BspLI	GGNNCC	5 cut(s)	730, 907, 1493, 1695, 1740
BspMAI	CTGCAG	1 cut(s)	1307
BspPI	GGATC	3 cut(s)	112, 425, 1085
BspQI	GCTCTTC	1 cut(s)	369
BspT107I	GGYRCC	3 cut(s)	728, 905, 1738
BsrDI	GCAATG	3 cut(s)	276, 384, 1762
BsrI	ACTGG	5 cut(s)	910, 1087, 1119, 1220, 1341
BssECI	CCNNGG	6 cut(s)	137, 138, 408, 1143, 1271, 1486
BssMI	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
BssNI	GRCGYC	1 cut(s)	183
BssT1I	CCWWGG	3 cut(s)	408, 1271, 1486
Bst2UI	CCWGG	1 cut(s)	1028
Bst4CI	ACNGT	1 cut(s)	693
Bst6I	CTCTTC	4 cut(s)	78, 369, 1059, 1380
BstACI	GRCGYC	1 cut(s)	183
BstAPI	GCANNNNNTGC	1 cut(s)	1193
BstC8I	GCNNGC	2 cut(s)	7, 1350
BstDEI	CTNAG	9 cut(s)	24, 221, 522, 572, 630, 724, 750, 833, 1356
BstENI	CCTNNNNNAGG	1 cut(s)	1142
BstF5I	GGATG	8 cut(s)	216, 563, 815, 1135, 1200, 1231, 1267, 1656
BstFNI	CGCG	1 cut(s)	45
BstH2I	RGCGCY	1 cut(s)	1154
BstHHI	GCGC	2 cut(s)	283, 1153
BstKTI	GATC	8 cut(s)	107, 433, 858, 937, 1009, 1093, 1558, 1729
BstMAI	GTCTC	2 cut(s)	318, 962
BstMBI	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
BstMWI	GCNNNNNNNGC	5 cut(s)	419, 1037, 1148, 1193, 1627
BstNI	CCWGG	1 cut(s)	1028
BstNSI	RCATGY	3 cut(s)	351, 866, 1352
BstSCI	CCNGG	4 cut(s)	136, 137, 1026, 1214
BstSFI	CTRYAG	1 cut(s)	1303
BstSLI	GKGCMC	2 cut(s)	138, 910
BstUI	CGCG	1 cut(s)	45
BstV1I	GCAGC	5 cut(s)	242, 825, 1180, 1364, 1739
BstV2I	GAAGAC	1 cut(s)	301
BstX2I	RGATCY	3 cut(s)	104, 430, 934
BstXI	CCANNNNNNTGG	2 cut(s)	59, 1126
BstYI	RGATCY	3 cut(s)	104, 430, 934
Bsu15I	ATCGAT	1 cut(s)	1248
Bsu36I	CCTNAGG	1 cut(s)	833
BsuI	GTATCC	1 cut(s)	1127
BsuRI	GGCC	4 cut(s)	51, 451, 628, 1219
BsuTUI	ATCGAT	1 cut(s)	1248
BtgZI	GCGATG	1 cut(s)	26
BtrI	CACGTC	1 cut(s)	1425
BtsCI	GGATG	8 cut(s)	216, 563, 815, 1135, 1200, 1231, 1267, 1656
BtsIMutI	CAGTG	2 cut(s)	1094, 1227
BtuMI	TCGCGA	1 cut(s)	45
Cac8I	GCNNGC	2 cut(s)	7, 1350
CaiI	CAGNNNCTG	2 cut(s)	1286, 1630
CciI	TCATGA	4 cut(s)	703, 1311, 1561, 1771
CfoI	GCGC	2 cut(s)	283, 1153
Cfr13I	GGNCC	1 cut(s)	916
Cfr9I	CCCGGG	1 cut(s)	137
ClaI	ATCGAT	1 cut(s)	1248
CseI	GACGC	3 cut(s)	172, 480, 1535
Csp6I	GTAC	2 cut(s)	1344, 1739
CviQI	GTAC	2 cut(s)	1344, 1739
DdeI	CTNAG	9 cut(s)	24, 221, 522, 572, 630, 724, 750, 833, 1356
DpnI	GATC	8 cut(s)	106, 432, 857, 936, 1008, 1092, 1557, 1728
DpnII	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
EaeI	YGGCCR	1 cut(s)	1217
Eam1104I	CTCTTC	4 cut(s)	78, 369, 1059, 1380
EarI	CTCTTC	4 cut(s)	78, 369, 1059, 1380
Ecl136II	GAGCTC	2 cut(s)	379, 1621
Eco130I	CCWWGG	3 cut(s)	408, 1271, 1486
Eco147I	AGGCCT	1 cut(s)	628
Eco24I	GRGCYC	4 cut(s)	381, 769, 1494, 1623
Eco32I	GATATC	1 cut(s)	781
Eco47I	GGWCC	1 cut(s)	916
Eco53kI	GAGCTC	2 cut(s)	379, 1621
Eco57I	CTGAAG	4 cut(s)	51, 273, 295, 324
Eco81I	CCTNAGG	1 cut(s)	833
Eco88I	CYCGRG	1 cut(s)	137
EcoICRI	GAGCTC	2 cut(s)	379, 1621
EcoNI	CCTNNNNNAGG	1 cut(s)	1142
EcoRII	CCWGG	1 cut(s)	1026
EcoRV	GATATC	1 cut(s)	781
EcoT14I	CCWWGG	3 cut(s)	408, 1271, 1486
EcoT22I	ATGCAT	3 cut(s)	401, 565, 1058
EcoT38I	GRGCYC	4 cut(s)	381, 769, 1494, 1623
ErhI	CCWWGG	3 cut(s)	408, 1271, 1486
FauI	CCCGC	1 cut(s)	1504
FbaI	TGATCA	1 cut(s)	1006
Fnu4HI	GCNGC	6 cut(s)	231, 642, 839, 1194, 1353, 1753
FokI	GGATG	8 cut(s)	203, 550, 802, 1142, 1187, 1238, 1254, 1643
FriOI	GRGCYC	4 cut(s)	381, 769, 1494, 1623
Fsp4HI	GCNGC	6 cut(s)	231, 642, 839, 1194, 1353, 1753
FspBI	CTAG	3 cut(s)	68, 93, 1783
FspI	TGCGCA	1 cut(s)	282
GlaI	GCGC	2 cut(s)	282, 1152
GluI	GCNGC	6 cut(s)	231, 642, 839, 1194, 1353, 1753
GsaI	CCCAGC	1 cut(s)	1479
GsuI	CTGGAG	1 cut(s)	1607
HaeII	RGCGCY	1 cut(s)	1154
HaeIII	GGCC	4 cut(s)	51, 451, 628, 1219
HapII	CCGG	4 cut(s)	138, 1216, 1515, 1736
HgaI	GACGC	3 cut(s)	172, 480, 1535
HhaI	GCGC	2 cut(s)	283, 1153
Hin1I	GRCGYC	1 cut(s)	183
Hin6I	GCGC	2 cut(s)	281, 1151
HinP1I	GCGC	2 cut(s)	281, 1151
HincII	GTYRAC	1 cut(s)	1450
HindII	GTYRAC	1 cut(s)	1450
HindIII	AAGCTT	3 cut(s)	14, 420, 1325
HpaII	CCGG	4 cut(s)	138, 1216, 1515, 1736
Hpy166II	GTNNAC	6 cut(s)	721, 791, 1024, 1450, 1483, 1525
Hpy188I	TCNGA	7 cut(s)	31, 514, 751, 996, 1359, 1707, 1731
Hpy8I	GTNNAC	6 cut(s)	721, 791, 1024, 1450, 1483, 1525
HpyAV	CCTTC	5 cut(s)	41, 95, 1255, 1609, 1670
HpyCH4III	ACNGT	1 cut(s)	693
HpyCH4IV	ACGT	3 cut(s)	210, 1424, 1576
HpyF10VI	GCNNNNNNNGC	5 cut(s)	419, 1037, 1148, 1193, 1627
HpyF3I	CTNAG	9 cut(s)	24, 221, 522, 572, 630, 724, 750, 833, 1356
HpySE526I	ACGT	3 cut(s)	210, 1424, 1576
Hsp92I	GRCGYC	1 cut(s)	183
HspAI	GCGC	2 cut(s)	281, 1151
KpnI	GGTACC	1 cut(s)	1742
Ksp22I	TGATCA	1 cut(s)	1006
Kzo9I	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
LguI	GCTCTTC	1 cut(s)	369
Lsp1109I	GCAGC	5 cut(s)	242, 825, 1180, 1364, 1739
LweI	GCATC	7 cut(s)	386, 508, 550, 572, 1049, 1273, 1665
MaeI	CTAG	3 cut(s)	68, 93, 1783
MaeII	ACGT	3 cut(s)	210, 1424, 1576
MaeIII	GTNAC	3 cut(s)	163, 811, 1170
MalI	GATC	8 cut(s)	106, 432, 857, 936, 1008, 1092, 1557, 1728
MboI	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
MfeI	CAATTG	1 cut(s)	316
MflI	RGATCY	3 cut(s)	104, 430, 934
MhlI	GDGCHC	7 cut(s)	138, 381, 769, 910, 930, 1494, 1623
MluCI	AATT	9 cut(s)	170, 316, 611, 712, 886, 1162, 1178, 1383, 1428
MlyI	GAGTC	5 cut(s)	320, 819, 964, 1302, 1410
MmeI	TCCRAC	3 cut(s)	894, 1631, 1671
Mph1103I	ATGCAT	3 cut(s)	401, 565, 1058
MroXI	GAANNNNTTC	3 cut(s)	357, 508, 1410
MseI	TTAA	1 cut(s)	1161
MspI	CCGG	4 cut(s)	138, 1216, 1515, 1736
MspR9I	CCNGG	4 cut(s)	138, 139, 1028, 1216
MunI	CAATTG	1 cut(s)	316
Mva1269I	GAATGC	2 cut(s)	35, 990
MvaI	CCWGG	1 cut(s)	1028
MvnI	CGCG	1 cut(s)	45
MwoI	GCNNNNNNNGC	5 cut(s)	419, 1037, 1148, 1193, 1627
NciI	CCSGG	3 cut(s)	138, 139, 1216
NdeII	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
NlaIV	GGNNCC	5 cut(s)	730, 907, 1493, 1695, 1740
NmeAIII	GCCGAG	1 cut(s)	1168
NmuCI	GTSAC	1 cut(s)	811
NruI	TCGCGA	1 cut(s)	45
NsbI	TGCGCA	1 cut(s)	282
NsiI	ATGCAT	3 cut(s)	401, 565, 1058
NspI	RCATGY	3 cut(s)	351, 866, 1352
PaeI	GCATGC	1 cut(s)	1352
PagI	TCATGA	4 cut(s)	703, 1311, 1561, 1771
PceI	AGGCCT	1 cut(s)	628
PciI	ACATGT	1 cut(s)	347
PciSI	GCTCTTC	1 cut(s)	369
PctI	GAATGC	2 cut(s)	35, 990
PdmI	GAANNNNTTC	3 cut(s)	357, 508, 1410
PfeI	GAWTC	5 cut(s)	404, 598, 1000, 1712, 1732
PflMI	CCANNNNNTGG	2 cut(s)	1546, 1630
PkrI	GCNGC	6 cut(s)	232, 643, 840, 1195, 1354, 1754
PleI	GAGTC	5 cut(s)	320, 818, 964, 1302, 1410
PpsI	GAGTC	5 cut(s)	320, 818, 964, 1302, 1410
PscI	ACATGT	1 cut(s)	347
Psp124BI	GAGCTC	2 cut(s)	381, 1623
Psp6I	CCWGG	1 cut(s)	1026
PspFI	CCCAGC	1 cut(s)	1475
PspGI	CCWGG	1 cut(s)	1026
PspN4I	GGNNCC	5 cut(s)	730, 907, 1493, 1695, 1740
PspPI	GGNCC	1 cut(s)	916
PstI	CTGCAG	1 cut(s)	1307
PstNI	CAGNNNCTG	2 cut(s)	1286, 1630
PsuI	RGATCY	3 cut(s)	104, 430, 934
RruI	TCGCGA	1 cut(s)	45
RsaI	GTAC	2 cut(s)	1345, 1740
RsaNI	GTAC	2 cut(s)	1344, 1739
SacI	GAGCTC	2 cut(s)	381, 1623
SapI	GCTCTTC	1 cut(s)	369
SaqAI	TTAA	1 cut(s)	1161
SatI	GCNGC	6 cut(s)	231, 642, 839, 1194, 1353, 1753
Sau3AI	GATC	8 cut(s)	104, 430, 855, 934, 1006, 1090, 1555, 1726
Sau96I	GGNCC	1 cut(s)	916
SchI	GAGTC	5 cut(s)	320, 819, 964, 1302, 1410
ScrFI	CCNGG	4 cut(s)	138, 139, 1028, 1216
SduI	GDGCHC	7 cut(s)	138, 381, 769, 910, 930, 1494, 1623
SfaNI	GCATC	7 cut(s)	386, 508, 550, 572, 1049, 1273, 1665
SfcI	CTRYAG	1 cut(s)	1303
SinI	GGWCC	1 cut(s)	916
SmaI	CCCGGG	1 cut(s)	139
SmlI	CTYRAG	1 cut(s)	1457
SmoI	CTYRAG	1 cut(s)	1457
SphI	GCATGC	1 cut(s)	1352
Sse9I	AATT	9 cut(s)	170, 316, 611, 712, 886, 1162, 1178, 1383, 1428
SseBI	AGGCCT	1 cut(s)	628
SsiI	CCGC	3 cut(s)	642, 1420, 1497
SspMI	CTAG	3 cut(s)	68, 93, 1783
SstI	GAGCTC	2 cut(s)	381, 1623
StuI	AGGCCT	1 cut(s)	628
StyD4I	CCNGG	4 cut(s)	136, 137, 1026, 1214
StyI	CCWWGG	3 cut(s)	408, 1271, 1486
TaaI	ACNGT	1 cut(s)	693
TaiI	ACGT	3 cut(s)	213, 1427, 1579
TaqI	TCGA	8 cut(s)	81, 695, 1062, 1248, 1378, 1414, 1554, 1715
TasI	AATT	9 cut(s)	170, 316, 611, 712, 886, 1162, 1178, 1383, 1428
TauI	GCSGC	1 cut(s)	644
TfiI	GAWTC	5 cut(s)	404, 598, 1000, 1712, 1732
Tru1I	TTAA	1 cut(s)	1161
Tru9I	TTAA	1 cut(s)	1161
TscAI	CASTG	2 cut(s)	1101, 1227
TseFI	GTSAC	1 cut(s)	811
TseI	GCWGC	5 cut(s)	230, 838, 1193, 1352, 1752
Tsp45I	GTSAC	1 cut(s)	811
TspGWI	ACGGA	1 cut(s)	516
TspMI	CCCGGG	1 cut(s)	137
TspRI	CASTG	2 cut(s)	1101, 1227
Van91I	CCANNNNNTGG	2 cut(s)	1546, 1630
VpaK11BI	GGWCC	1 cut(s)	916
XagI	CCTNNNNNAGG	1 cut(s)	1142
XapI	RAATTY	3 cut(s)	170, 886, 1178
XceI	RCATGY	3 cut(s)	351, 866, 1352
XcmI	CCANNNNNNNNNTGG	1 cut(s)	492
XmaI	CCCGGG	1 cut(s)	137
XmnI	GAANNNNTTC	3 cut(s)	357, 508, 1410
XspI	CTAG	3 cut(s)	68, 93, 1783
Zsp2I	ATGCAT	3 cut(s)	401, 565, 1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.