Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002522

Physical Location & Seq

Genomic Coordinates Forward (+)

14543692 .. 14546566

Gene Structure 2875 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G014440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGCTTGCATGAAGCTGGGAGTGAAGTCTGAAGCATTTCATCGGGAAGGCCAGACTTGGGTTTGCACAACTGGGCTACCGAGCGATATTATTGTTCAAGTTGGGGAAATGTCTTTCCACCTCCATAAGTTTCCGTTGCTTTCTAAAAGTGGGCTATTAGAGCAGCTTATAGAACAGTGTTCTATGGAGGAAAGCTCACTTTGTGCATTGAAACTTCATGGTGTGCCTGGGGGAGCTAAAGCATTTGAGCTTGTAACCAAATTTTGCTATGGTGTCAAAATAGAGCTGACTGCGTTGAATGTTGTCATCCTTAGATGTGCAGCAGAATACCTCCGGATGACTGAAGAATATGAACAAGGAAACCTCATTGCACAAACAGAGGTTTTCCTTAATGAAGTCTTCGGCAGTTGGAAAGACTCCATAATAGCTCTTGAAACATGTGAAGAAGTGCAACCATATGTCGAAGAGCTCCACATTGTGTCAAGATGCATTGATTCACTGGCTACAAAAGCTTGTTCAGACCCAAAGTTGTTCAGCAGGCCTATGTCGGGAGGAAGTGACATTAAGAAGCCAACTGGCACTGTGTCATGGAATGGAATTGCTGCTGAAAGTAAGCCACAATCTCCCGGCGAAAATTGGTGGTATGAAGATACATCCTTCCTGAGCTTACCTCTCTATAAACGCCTGATTCAAGCTGTCGAATCAAAAGGCATGAGGCCCGAGAGTATTGCAGCTTCTCTTATAACCTATGCTAGAAAGTATCTGCCCTTGATGAATAGGCTATCAAGCTTTAACGATGCAAATCATGCAAACTCGGGCACAAACATTTCTGATGAAGACCAAAGGGTTTTACTTGAAGAAATTGTGGGGTTGCTTCCGAATAAGAAAGGAGTAACATCCTCCAAGTTTCTGCTTAGGCTCTTAAGAACTGCTATGATATTACATGCAAGTCAATCATGTACAGATAATTTGGAGAAAAGGGTGGGTGCACAGCTGGACCAAGCTGTTCTCATTGATCTTCTCATACCAAATATGGGCTACTCAGTGGAGACTCTTTATGACATAGACTGCATTCAGAGGATTCTTGATCATTTCATGTTGGTAAACCAGCCTTATCCATCATCTTCACCATGCATAATTGAAGAGGGGCAACTGATGACTGGCACTGATCCATTGACACCTATTACCATGGTGGCCAGTCTGGTAGATGGATATCTTGCCGAGGTAGCACCAGATGTTAATTTGAAGTTACCGAAATTTCAGGCACTCGCTGCTGTCATACCTGAATATGCCAGGCCGCTGGATGATGGCATTTATCATGCCATTGATGTTTTCTTGAAGGCACATCCTTGGCTTACAGATGCTGAAAGGGAGCTACTATGTAGACTCATGAGCTGCAATAAACTCTCATTGGAAGCCAGCACCCATGCAGCGCAGAACGAAAGGTTACCTCTTCGAGTAATTGTTCAAGTCCTCTTCTTCGAACAGCTTAGACTTCGAACATCAATTTCTGGTTGGTTGTTTGTTGACAGTCTTGAGAACTCACAAAATCCTAGTGGAAACCTTGGGCTCCCCAGCAAAAATGATGGGTCCAATCAAGTAGACCCTGCACAAGTTGATCGAGCTGTGGGTTTTGATCATGAGGTGAGGGAGCGTGTTTTGGAGCTCCAAAAGGAGTGTTCAAGTATGAAAAAGGAGCTTCAGAAGCTGGTAAAAAACAAGAGAAGTTGGAGCATTCTTCCCATTAGGTTAGGTTTTAGAAAAAAGGTTGATCCTTGTTGTCCAAAAGAATCAAAGGCCTCTGATAGGATGACACCAGCATCATGTTTCAGTGGGCAACAAAATCATGTGAATGGTGAAGTGCCTCATTCACCTGCAACGCCTCAAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

630

Amino Acids

70.09

Weight (kDa)

5.72

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	27 - 115	3.8e-07	BTB/POZ domain
NPH3	PF03000	212 - 474	4.1e-92	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03250 AT5G03250
fragaria_vesca	FvH4_6g16010 FvH4_7g19310 FvH4_7g19310 FvH4_7g19310
malus_domestica	MD01G1107700.v1.1 MD04G1096800.v1.1 MD07G1173300.v1.1
prunus_persica	Prupe.2G212500_v2.0.a1 Prupe.6G236100_v2.0.a1
pyrus_communis	pycom01g13460 pycom04g09190 pycom07g16800 pycom12g11690
rosa_chinensis	RchiOBHm_Chr1g0363191 RchiOBHm_Chr3g0469731
rosa_laevigata	RLG00000024326 RLG00000027585
rosa_multiflora	Rmu_sc0002925.1_g000004 Rmu_sc0010644.1_g000001 Rmu_sc0022819.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293390 Rroxscaffold_6G00411520
rosa_rugosa	Rorug01G0305300 Rorug03G0103400 Rorug03G0103500 Rorug03G0103600 Rorug03G0103700 Rorug03G0103800 Rorug03G0103800
rosa_samantha	Rh1AG314100 Rh1BG277600 Rh1CG294000 Rh1DG308300 Rh3AG153200 Rh3BG177200 Rh3CG168100 Rh3DG198400
rosa_wichuraiana	Rw1G027830 Rw3G014440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	743
AarI	CACCTGC	1 cut(s)	1882
Acc36I	ACCTGC	1 cut(s)	1882
AccI	GTMKAC	2 cut(s)	1384, 1602
AccIII	TCCGGA	1 cut(s)	333
AciI	CCGC	1 cut(s)	1298
AclWI	GGATC	2 cut(s)	1163, 1766
AcoI	YGGCCR	1 cut(s)	1194
AcsI	RAATTY	2 cut(s)	260, 1256
AcuI	CTGAAG	3 cut(s)	51, 363, 1685
AdeI	CACNNNGTG	2 cut(s)	203, 478
AfaI	GTAC	1 cut(s)	961
AfiI	CCNNNNNNNGG	4 cut(s)	58, 548, 1034, 1806
AflII	CTTAAG	1 cut(s)	922
AflIII	ACRYGT	1 cut(s)	437
AjnI	CCWGG	2 cut(s)	226, 1292
Alw21I	GWGCWC	3 cut(s)	471, 991, 1668
Alw26I	GTCTC	1 cut(s)	1043
Alw44I	GTGCAC	1 cut(s)	987
AlwI	GGATC	2 cut(s)	1163, 1766
AlwNI	CAGNNNCTG	2 cut(s)	1364, 1708
Ama87I	CYCGRG	2 cut(s)	719, 814
Aor13HI	TCCGGA	1 cut(s)	333
AoxI	GGCC	6 cut(s)	49, 539, 716, 1194, 1295, 1797
ApaLI	GTGCAC	1 cut(s)	987
ApeKI	GCWGC	7 cut(s)	163, 320, 602, 731, 1271, 1395, 1430
ApoI	RAATTY	2 cut(s)	260, 1256
Asp700I	GAANNNNTTC	1 cut(s)	36
AspLEI	GCGC	1 cut(s)	1435
AspS9I	GGNCC	3 cut(s)	717, 997, 1590
AsuC2I	CCSGG	1 cut(s)	627
AsuHPI	GGTGA	4 cut(s)	1119, 1657, 1863, 1868
AsuII	TTCGAA	2 cut(s)	1482, 1498
AvaI	CYCGRG	2 cut(s)	719, 814
AvaII	GGWCC	2 cut(s)	997, 1590
BaeGI	GKGCMC	2 cut(s)	821, 991
BalI	TGGCCA	1 cut(s)	1196
BanII	GRGCYC	3 cut(s)	471, 1572, 1668
BarI	GAAGNNNNNNTAC	2 cut(s)	718, 750
BbsI	GAAGAC	2 cut(s)	391, 843
Bbv12I	GWGCWC	3 cut(s)	471, 991, 1668
BbvI	GCAGC	7 cut(s)	175, 332, 589, 743, 1258, 1382, 1442
BccI	CCATC	4 cut(s)	1126, 1202, 1301, 1580
BcgI	CGANNNNNNTGC	2 cut(s)	710, 744
BciT130I	CCWGG	2 cut(s)	228, 1294
BclI	TGATCA	2 cut(s)	1087, 1636
BcnI	CCSGG	1 cut(s)	627
BcoDI	GTCTC	1 cut(s)	1043
BfaI	CTAG	2 cut(s)	753, 1554
BfrI	CTTAAG	1 cut(s)	922
BfuAI	ACCTGC	1 cut(s)	1882
BisI	GCNGC	8 cut(s)	164, 321, 603, 732, 1272, 1298, 1396, 1431
BlsI	GCNGC	8 cut(s)	165, 322, 604, 733, 1273, 1299, 1397, 1432
Bme1390I	CCNGG	3 cut(s)	228, 627, 1294
Bme18I	GGWCC	2 cut(s)	997, 1590
BmeT110I	CYCGRG	2 cut(s)	719, 814
BmgT120I	GGNCC	3 cut(s)	717, 997, 1590
BmiI	GGNNCC	2 cut(s)	1571, 1591
BmrFI	CCNGG	3 cut(s)	228, 627, 1294
BmrI	ACTGGG	1 cut(s)	81
BmsI	GCATC	4 cut(s)	476, 787, 1351, 1829
BmuI	ACTGGG	1 cut(s)	81
BpiI	GAAGAC	2 cut(s)	391, 843
BplI	GAGNNNNNCTC	4 cut(s)	179, 211, 655, 687
Bpu10I	CCTNAGC	2 cut(s)	662, 914
Bpu14I	TTCGAA	2 cut(s)	1482, 1498
BpuEI	CTTGAG	1 cut(s)	1556
BpuMI	CCSGG	1 cut(s)	627
BsaBI	GATNNNNATC	2 cut(s)	801, 1212
BsaJI	CCNNGG	5 cut(s)	227, 1188, 1221, 1349, 1564
BsaWI	WCCGGW	1 cut(s)	333
Bsc4I	CCNNNNNNNGG	4 cut(s)	58, 548, 1034, 1806
Bse1I	ACTGG	5 cut(s)	76, 504, 580, 1165, 1197
Bse3DI	GCAATG	1 cut(s)	366
Bse8I	GATNNNNATC	2 cut(s)	801, 1212
BseAI	TCCGGA	1 cut(s)	333
BseBI	CCWGG	2 cut(s)	228, 1294
BseDI	CCNNGG	5 cut(s)	227, 1188, 1221, 1349, 1564
BseGI	GGATG	7 cut(s)	306, 342, 653, 896, 1309, 1345, 1815
BseJI	GATNNNNATC	2 cut(s)	801, 1212
BseLI	CCNNNNNNNGG	4 cut(s)	58, 548, 1034, 1806
BseMI	GCAATG	1 cut(s)	366
BseMII	CTCAG	2 cut(s)	653, 1056
BseNI	ACTGG	5 cut(s)	76, 504, 580, 1165, 1197
BseSI	GKGCMC	2 cut(s)	821, 991
BseXI	GCAGC	7 cut(s)	175, 332, 589, 743, 1258, 1382, 1442
BseYI	CCCAGC	2 cut(s)	16, 1574
BsgI	GTGCAG	2 cut(s)	339, 1593
BshFI	GGCC	6 cut(s)	51, 541, 718, 1196, 1297, 1799
BsiHKAI	GWGCWC	3 cut(s)	471, 991, 1668
BsiHKCI	CYCGRG	2 cut(s)	719, 814
BsiSI	CCGG	2 cut(s)	334, 627
BslI	CCNNNNNNNGG	4 cut(s)	58, 548, 1034, 1806
BsmAI	GTCTC	1 cut(s)	1043
BsmI	GAATGC	2 cut(s)	1071, 1734
BsnI	GGCC	6 cut(s)	51, 541, 718, 1196, 1297, 1799
BsoBI	CYCGRG	2 cut(s)	719, 814
Bsp119I	TTCGAA	2 cut(s)	1482, 1498
Bsp1286I	GDGCHC	5 cut(s)	471, 821, 991, 1572, 1668
Bsp13I	TCCGGA	1 cut(s)	333
Bsp1407I	TGTACA	1 cut(s)	959
Bsp143I	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
Bsp19I	CCATGG	1 cut(s)	1188
BspACI	CCGC	1 cut(s)	1298
BspANI	GGCC	6 cut(s)	51, 541, 718, 1196, 1297, 1799
BspCNI	CTCAG	2 cut(s)	654, 1055
BspEI	TCCGGA	1 cut(s)	333
BspHI	TCATGA	2 cut(s)	1389, 1639
BspLI	GGNNCC	2 cut(s)	1571, 1591
BspMI	ACCTGC	1 cut(s)	1882
BspPI	GGATC	2 cut(s)	1163, 1766
BspQI	GCTCTTC	1 cut(s)	459
BspT104I	TTCGAA	2 cut(s)	1482, 1498
BspTI	CTTAAG	1 cut(s)	922
BsrDI	GCAATG	1 cut(s)	366
BsrGI	TGTACA	1 cut(s)	959
BsrI	ACTGG	5 cut(s)	76, 504, 580, 1165, 1197
BssECI	CCNNGG	5 cut(s)	227, 1188, 1221, 1349, 1564
BssMI	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
BssT1I	CCWWGG	3 cut(s)	1188, 1349, 1564
Bst2UI	CCWGG	2 cut(s)	228, 1294
Bst4CI	ACNGT	3 cut(s)	177, 583, 1532
Bst6I	CTCTTC	4 cut(s)	459, 1137, 1458, 1481
BstAFI	CTTAAG	1 cut(s)	922
BstAPI	GCANNNNNTGC	2 cut(s)	806, 1271
BstAUI	TGTACA	1 cut(s)	959
BstBI	TTCGAA	2 cut(s)	1482, 1498
BstC8I	GCNNGC	3 cut(s)	7, 539, 1420
BstDEI	CTNAG	5 cut(s)	311, 662, 914, 1042, 1490
BstDSI	CCRYGG	1 cut(s)	1188
BstEII	GGTNACC	1 cut(s)	1446
BstENI	CCTNNNNNAGG	1 cut(s)	1804
BstF5I	GGATG	7 cut(s)	306, 342, 653, 896, 1309, 1345, 1815
BstHHI	GCGC	1 cut(s)	1435
BstKTI	GATC	6 cut(s)	1018, 1090, 1171, 1621, 1639, 1774
BstMAI	GTCTC	1 cut(s)	1043
BstMBI	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
BstMWI	GCNNNNNNNGC	6 cut(s)	160, 509, 806, 1226, 1271, 1705
BstNI	CCWGG	2 cut(s)	228, 1294
BstNSI	RCATGY	2 cut(s)	441, 947
BstPI	GGTNACC	1 cut(s)	1446
BstSCI	CCNGG	3 cut(s)	226, 625, 1292
BstSLI	GKGCMC	2 cut(s)	821, 991
BstV1I	GCAGC	7 cut(s)	175, 332, 589, 743, 1258, 1382, 1442
BstV2I	GAAGAC	2 cut(s)	391, 843
BstXI	CCANNNNNNTGG	1 cut(s)	1300
BsuRI	GGCC	6 cut(s)	51, 541, 718, 1196, 1297, 1799
BtgI	CCRYGG	1 cut(s)	1188
BtsCI	GGATG	7 cut(s)	306, 342, 653, 896, 1309, 1345, 1815
BtsIMutI	CAGTG	6 cut(s)	182, 497, 579, 1050, 1164, 1837
BveI	ACCTGC	1 cut(s)	1882
Cac8I	GCNNGC	3 cut(s)	7, 539, 1420
CaiI	CAGNNNCTG	2 cut(s)	1364, 1708
CciI	TCATGA	2 cut(s)	1389, 1639
CfoI	GCGC	1 cut(s)	1435
Cfr13I	GGNCC	3 cut(s)	717, 997, 1590
Csp6I	GTAC	1 cut(s)	960
CviQI	GTAC	1 cut(s)	960
DdeI	CTNAG	5 cut(s)	311, 662, 914, 1042, 1490
DpnI	GATC	6 cut(s)	1017, 1089, 1170, 1620, 1638, 1773
DpnII	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
DraIII	CACNNNGTG	2 cut(s)	203, 478
EaeI	YGGCCR	1 cut(s)	1194
Eam1104I	CTCTTC	4 cut(s)	459, 1137, 1458, 1481
EarI	CTCTTC	4 cut(s)	459, 1137, 1458, 1481
Ecl136II	GAGCTC	2 cut(s)	469, 1666
Eco130I	CCWWGG	3 cut(s)	1188, 1349, 1564
Eco147I	AGGCCT	2 cut(s)	541, 1799
Eco24I	GRGCYC	3 cut(s)	471, 1572, 1668
Eco32I	GATATC	1 cut(s)	1214
Eco47I	GGWCC	2 cut(s)	997, 1590
Eco53kI	GAGCTC	2 cut(s)	469, 1666
Eco57I	CTGAAG	3 cut(s)	51, 363, 1685
Eco88I	CYCGRG	2 cut(s)	719, 814
Eco91I	GGTNACC	1 cut(s)	1446
EcoICRI	GAGCTC	2 cut(s)	469, 1666
EcoNI	CCTNNNNNAGG	1 cut(s)	1804
EcoO65I	GGTNACC	1 cut(s)	1446
EcoRII	CCWGG	2 cut(s)	226, 1292
EcoRV	GATATC	1 cut(s)	1214
EcoT14I	CCWWGG	3 cut(s)	1188, 1349, 1564
EcoT22I	ATGCAT	2 cut(s)	491, 1136
EcoT38I	GRGCYC	3 cut(s)	471, 1572, 1668
ErhI	CCWWGG	3 cut(s)	1188, 1349, 1564
FauNDI	CATATG	1 cut(s)	457
FbaI	TGATCA	2 cut(s)	1087, 1636
FblI	GTMKAC	2 cut(s)	1384, 1602
Fnu4HI	GCNGC	8 cut(s)	164, 321, 603, 732, 1272, 1298, 1396, 1431
FokI	GGATG	7 cut(s)	293, 349, 640, 883, 1316, 1332, 1822
FriOI	GRGCYC	3 cut(s)	471, 1572, 1668
Fsp4HI	GCNGC	8 cut(s)	164, 321, 603, 732, 1272, 1298, 1396, 1431
FspBI	CTAG	2 cut(s)	753, 1554
GlaI	GCGC	1 cut(s)	1434
GluI	GCNGC	8 cut(s)	164, 321, 603, 732, 1272, 1298, 1396, 1431
GsaI	CCCAGC	2 cut(s)	20, 1578
HaeIII	GGCC	6 cut(s)	51, 541, 718, 1196, 1297, 1799
HapII	CCGG	2 cut(s)	334, 627
HhaI	GCGC	1 cut(s)	1435
Hin6I	GCGC	1 cut(s)	1433
HinP1I	GCGC	1 cut(s)	1433
HincII	GTYRAC	1 cut(s)	1528
HindII	GTYRAC	1 cut(s)	1528
HindIII	AAGCTT	2 cut(s)	510, 787
HinfI	GANTC	8 cut(s)	416, 494, 688, 701, 1051, 1081, 1386, 1790
HpaII	CCGG	2 cut(s)	334, 627
HphI	GGTGA	4 cut(s)	1119, 1657, 1863, 1868
Hpy166II	GTNNAC	5 cut(s)	989, 1105, 1385, 1528, 1603
Hpy188I	TCNGA	7 cut(s)	31, 520, 832, 879, 1077, 1704, 1804
Hpy8I	GTNNAC	5 cut(s)	989, 1105, 1385, 1528, 1603
HpyAV	CCTTC	3 cut(s)	41, 667, 1333
HpyCH4III	ACNGT	3 cut(s)	177, 583, 1532
HpyF10VI	GCNNNNNNNGC	6 cut(s)	160, 509, 806, 1226, 1271, 1705
HpyF3I	CTNAG	5 cut(s)	311, 662, 914, 1042, 1490
HspAI	GCGC	1 cut(s)	1433
Kpn2I	TCCGGA	1 cut(s)	333
Ksp22I	TGATCA	2 cut(s)	1087, 1636
Kzo9I	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
LguI	GCTCTTC	1 cut(s)	459
LmnI	GCTCC	9 cut(s)	233, 474, 1372, 1575, 1651, 1663, 1671, 1696, 1731
Lsp1109I	GCAGC	7 cut(s)	175, 332, 589, 743, 1258, 1382, 1442
LweI	GCATC	4 cut(s)	476, 787, 1351, 1829
MaeI	CTAG	2 cut(s)	753, 1554
MaeIII	GTNAC	5 cut(s)	253, 557, 892, 1248, 1446
MalI	GATC	6 cut(s)	1017, 1089, 1170, 1620, 1638, 1773
MboI	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
MhlI	GDGCHC	5 cut(s)	471, 821, 991, 1572, 1668
MlsI	TGGCCA	1 cut(s)	1196
MluNI	TGGCCA	1 cut(s)	1196
MlyI	GAGTC	3 cut(s)	410, 1045, 1380
MmeI	TCCRAC	2 cut(s)	389, 1709
Mox20I	TGGCCA	1 cut(s)	1196
Mph1103I	ATGCAT	2 cut(s)	491, 1136
MroI	TCCGGA	1 cut(s)	333
MroXI	GAANNNNTTC	1 cut(s)	36
MscI	TGGCCA	1 cut(s)	1196
MseI	TTAA	5 cut(s)	390, 564, 792, 923, 1239
MslI	CAYNNNNRTG	1 cut(s)	1851
Msp20I	TGGCCA	1 cut(s)	1196
MspA1I	CMGCKG	2 cut(s)	994, 1300
MspCI	CTTAAG	1 cut(s)	922
MspI	CCGG	2 cut(s)	334, 627
MspR9I	CCNGG	3 cut(s)	228, 627, 1294
Mva1269I	GAATGC	2 cut(s)	1071, 1734
MvaI	CCWGG	2 cut(s)	228, 1294
MwoI	GCNNNNNNNGC	6 cut(s)	160, 509, 806, 1226, 1271, 1705
NciI	CCSGG	1 cut(s)	627
NcoI	CCATGG	1 cut(s)	1188
NdeI	CATATG	1 cut(s)	457
NdeII	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
NlaIV	GGNNCC	2 cut(s)	1571, 1591
NmeAIII	GCCGAG	1 cut(s)	1246
NmuCI	GTSAC	1 cut(s)	557
NsiI	ATGCAT	2 cut(s)	491, 1136
NspI	RCATGY	2 cut(s)	441, 947
NspV	TTCGAA	2 cut(s)	1482, 1498
PagI	TCATGA	2 cut(s)	1389, 1639
PaqCI	CACCTGC	1 cut(s)	1882
PceI	AGGCCT	2 cut(s)	541, 1799
PciI	ACATGT	1 cut(s)	437
PciSI	GCTCTTC	1 cut(s)	459
PctI	GAATGC	2 cut(s)	1071, 1734
PdmI	GAANNNNTTC	1 cut(s)	36
PfeI	GAWTC	5 cut(s)	494, 688, 701, 1081, 1790
PkrI	GCNGC	8 cut(s)	165, 322, 604, 733, 1273, 1299, 1397, 1432
PleI	GAGTC	3 cut(s)	410, 1045, 1380
PpsI	GAGTC	3 cut(s)	410, 1045, 1380
PscI	ACATGT	1 cut(s)	437
PsiI	TTATAA	1 cut(s)	743
Psp124BI	GAGCTC	2 cut(s)	471, 1668
Psp6I	CCWGG	2 cut(s)	226, 1292
PspEI	GGTNACC	1 cut(s)	1446
PspFI	CCCAGC	2 cut(s)	16, 1574
PspGI	CCWGG	2 cut(s)	226, 1292
PspN4I	GGNNCC	2 cut(s)	1571, 1591
PspPI	GGNCC	3 cut(s)	717, 997, 1590
PstNI	CAGNNNCTG	2 cut(s)	1364, 1708
PvuII	CAGCTG	1 cut(s)	994
RsaI	GTAC	1 cut(s)	961
RsaNI	GTAC	1 cut(s)	960
RseI	CAYNNNNRTG	1 cut(s)	1851
SacI	GAGCTC	2 cut(s)	471, 1668
SapI	GCTCTTC	1 cut(s)	459
SaqAI	TTAA	5 cut(s)	390, 564, 792, 923, 1239
SatI	GCNGC	8 cut(s)	164, 321, 603, 732, 1272, 1298, 1396, 1431
Sau3AI	GATC	6 cut(s)	1015, 1087, 1168, 1618, 1636, 1771
Sau96I	GGNCC	3 cut(s)	717, 997, 1590
SchI	GAGTC	3 cut(s)	410, 1045, 1380
ScrFI	CCNGG	3 cut(s)	228, 627, 1294
SduI	GDGCHC	5 cut(s)	471, 821, 991, 1572, 1668
SfaNI	GCATC	4 cut(s)	476, 787, 1351, 1829
SfuI	TTCGAA	2 cut(s)	1482, 1498
SinI	GGWCC	2 cut(s)	997, 1590
SmiMI	CAYNNNNRTG	1 cut(s)	1851
SmlI	CTYRAG	2 cut(s)	922, 1535
SmoI	CTYRAG	2 cut(s)	922, 1535
SseBI	AGGCCT	2 cut(s)	541, 1799
SsiI	CCGC	1 cut(s)	1298
SspMI	CTAG	2 cut(s)	753, 1554
SstI	GAGCTC	2 cut(s)	471, 1668
StuI	AGGCCT	2 cut(s)	541, 1799
StyD4I	CCNGG	3 cut(s)	226, 625, 1292
StyI	CCWWGG	3 cut(s)	1188, 1349, 1564
TaaI	ACNGT	3 cut(s)	177, 583, 1532
TaqI	TCGA	6 cut(s)	462, 699, 1456, 1482, 1498, 1621
TatI	WGTACW	1 cut(s)	959
TauI	GCSGC	1 cut(s)	1300
TfiI	GAWTC	5 cut(s)	494, 688, 701, 1081, 1790
Tru1I	TTAA	5 cut(s)	390, 564, 792, 923, 1239
Tru9I	TTAA	5 cut(s)	390, 564, 792, 923, 1239
TscAI	CASTG	6 cut(s)	182, 504, 586, 1050, 1171, 1837
TseFI	GTSAC	1 cut(s)	557
TseI	GCWGC	7 cut(s)	163, 320, 602, 731, 1271, 1395, 1430
Tsp45I	GTSAC	1 cut(s)	557
TspGWI	ACGGA	1 cut(s)	123
TspRI	CASTG	6 cut(s)	182, 504, 586, 1050, 1171, 1837
Vha464I	CTTAAG	1 cut(s)	922
VneI	GTGCAC	1 cut(s)	987
VpaK11BI	GGWCC	2 cut(s)	997, 1590
XagI	CCTNNNNNAGG	1 cut(s)	1804
XapI	RAATTY	2 cut(s)	260, 1256
XceI	RCATGY	2 cut(s)	441, 947
XmiI	GTMKAC	2 cut(s)	1384, 1602
XmnI	GAANNNNTTC	1 cut(s)	36
XspI	CTAG	2 cut(s)	753, 1554
Zsp2I	ATGCAT	2 cut(s)	491, 1136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.