Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002522

Physical Location & Seq

Genomic Coordinates Reverse (-)

24434945 .. 24438443

Gene Structure 3499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G212500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGCGTGCGTGAAGTTGGGATCTAAATCTGAAGTCTTTCACCTTGATGGCCAAACTTGGCTTTGCTCAACTGGACTTCCCAGTGACATTGTCGTTGAAGTCGGAGAAACATCTTTCCATCTCCACAAGTTTCCTTTGCTGTCTAGAAGTGGATTGCTAGAGAATGTTATTGGAGAAGTTTCTAGCGAGGATGAGCAGGAATGTATTGTGCAACTGCATGACATTCCTGGTGGAGCCAAATCATTCTTGCTGGTAGCCAAATTTTGTTATGGTGTGAGAATAGAACTCAATGCGTCAAATGTAGTTAGTTTGAGGTGTGCGGCTGAGTATCTTCGTATGGGTGAAGACTATGGAGAGGGGAATCTCATGACAAAAGCAGAGGATTTTCTAAACGAAATCTTTAGCAATTGGAGTGATTCCATTAAAGCACTTGAAACCTGCGAAGAGCTATTGCCTCATGCTGAAGAGCTTCATCTTGTTTCAAGATGCATCAATTCATTGGCAATGAAAGCTAGTGCTGATCCAGGTTTATTCAGTTGGCCTGTGTCGGGAAAGGATGCAACAGAGAGCTCAGAAGGCGTGGCGTTTTGGAATGGAATATGCACAACAGCCAAGCCACATCCAGTCAGTGAGGATTGGTGGTATGAAGATGTCTGCTCCCTAAAGTTTCCTCTTTATAAAAGACTGATTCTGGCTGTTGAATCAGGGAGCATGAAGCCAGAGAGGATTGCTGGATCCATCATGCACTATGCAAAGAGGCATCTTTCCTTGTTGGGTAGGCAATCGAGTCTTCGAAATGGAAACCATGCTGCCTCTTTATCAACTGTTTCTGCTCCATCTAATCCAGACCAAAGGAATCTCCTTGAAGAGATAGTGGAATTACTTCCTGATCAGAAGGGCGTCACACCAACCAACTTCCTGCTTAGGCTTCTGCGGACATCTATGATTTTGCAAGCTAGTACATCGTGTCGAGAGAATTTGGAGAGACAGGTTGGGGCCCAATTGGATCAAGCAGCTCTTGAAGATCTCTTGATACCAAACATGGGGTACTCAGTGGAGACCCTCTATGATACTGACTGCGTTCAGCGGATTCTTGATCACTTCATGCTTATGGACCGCGATTCGATTGAGTGTACTTCGAGCTGCATAGTGGATGAGGGCCAGTTGATGGGTGCATCTCATTCACTGACCCCAATGACCATGGTAGCTAACCTGGTGGATGGCTATCTTGCAGAGGTAGCACCTGATGTTAACTTGAAGTTGCAAAAATTTCAGTCTCTAGCTGCTGTTATCCCTGAATATGCCAGACCATTAGACGATGGAATTTACCGTGCTATCGATATATACCTCAAGGCCCATCCCTGGCTAACAGACTCCGAGAGGGAACAAGTCTGCAGGCTCATGAACTGCCAGAAGCTCTCACTGGAAGCCAGCACACATGCAGCCCAGAATGAGAGGCTACCGCTCCGTGTCATTGTCCAAGTTCTGTTCTTTGAACAACTTCGGCTGCGCACATCAGTTGCCAGTTGGTTCTTTGTATCTGACAACCTTGAGAACTCACAAAACCAGAGTGGGAATCTTGTGCTTGGTCGAAACGAGGCATCTGCTCACGCTGGCACCGCGCGGCGTGATCATACTGTGACCGTTGATGACATGAGGGAACGAGTTTCCGAGCTAGAGAAGGAGTGTTTGAGCATGAAACAAGAGATGGAGAAACTGGTGAAGACAAAGGGGAGCTGGAACACATTCTTGAAAAGGTTTGGTTTGAGACTCAAGTCAAAATCTGATGCCAAAAAAGCATCCAAGCCCCGCAGTGATTCCAAAGAAGCACCTACATCTATAGCACCACCACTTATGAAAGGAAAACAAGATTTTGAAAATAATGAATTAAGAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

633

Amino Acids

70.55

Weight (kDa)

5.38

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03250 AT5G03250
fragaria_vesca	FvH4_6g16010 FvH4_7g19310 FvH4_7g19310 FvH4_7g19310
malus_domestica	MD01G1107700.v1.1 MD04G1096800.v1.1 MD07G1173300.v1.1
prunus_persica	Prupe.2G212500_v2.0.a1 Prupe.6G236100_v2.0.a1
pyrus_communis	pycom01g13460 pycom04g09190 pycom07g16800 pycom12g11690
rosa_chinensis	RchiOBHm_Chr1g0363191 RchiOBHm_Chr3g0469731
rosa_laevigata	RLG00000024326 RLG00000027585
rosa_multiflora	Rmu_sc0002925.1_g000004 Rmu_sc0010644.1_g000001 Rmu_sc0022819.1_g000002
rosa_roxburghii	Rroxscaffold_4G00293390 Rroxscaffold_6G00411520
rosa_rugosa	Rorug01G0305300 Rorug03G0103400 Rorug03G0103500 Rorug03G0103600 Rorug03G0103700 Rorug03G0103800 Rorug03G0103800
rosa_samantha	Rh1AG314100 Rh1BG277600 Rh1CG294000 Rh1DG308300 Rh3AG153200 Rh3BG177200 Rh3CG168100 Rh3DG198400
rosa_wichuraiana	Rw1G027830 Rw3G014440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	678
Acc16I	TGCGCA	1 cut(s)	1511
Acc36I	ACCTGC	1 cut(s)	446
AccB1I	GGYRCC	1 cut(s)	1616
AccB7I	CCANNNNNTGG	1 cut(s)	1168
AccBSI	CCGCTC	1 cut(s)	1465
AccII	CGCG	3 cut(s)	1119, 1622, 1624
AciI	CCGC	8 cut(s)	320, 934, 1087, 1117, 1463, 1620, 1624, 1810
AclWI	GGATC	5 cut(s)	28, 515, 729, 742, 1014
AcoI	YGGCCR	1 cut(s)	49
AcsI	RAATTY	4 cut(s)	260, 976, 1268, 1323
AcuI	CTGAAG	2 cut(s)	51, 483
AcyI	GRCGYC	1 cut(s)	900
AfaI	GTAC	3 cut(s)	961, 1049, 1135
AfiI	CCNNNNNNNGG	4 cut(s)	548, 1043, 1168, 1362
AjnI	CCWGG	4 cut(s)	226, 523, 1212, 1361
Alw21I	GWGCWC	1 cut(s)	572
Alw26I	GTCTC	4 cut(s)	979, 1052, 1281, 1762
AlwI	GGATC	5 cut(s)	28, 515, 729, 742, 1014
AoxI	GGCC	5 cut(s)	49, 539, 996, 1159, 1353
ApaI	GGGCCC	1 cut(s)	1000
ApeKI	GCWGC	6 cut(s)	809, 1013, 1143, 1283, 1442, 1507
ApoI	RAATTY	4 cut(s)	260, 976, 1268, 1323
Asp700I	GAANNNNTTC	5 cut(s)	36, 468, 882, 1500, 1745
AspLEI	GCGC	2 cut(s)	1512, 1624
AspS9I	GGNCC	5 cut(s)	996, 997, 1114, 1159, 1354
AsuHPI	GGTGA	3 cut(s)	32, 353, 1732
AsuII	TTCGAA	1 cut(s)	793
AvaII	GGWCC	1 cut(s)	1114
BaeGI	GKGCMC	1 cut(s)	1000
BalI	TGGCCA	1 cut(s)	51
BamHI	GGATCC	1 cut(s)	734
BanI	GGYRCC	1 cut(s)	1616
BanII	GRGCYC	2 cut(s)	572, 1000
BbsI	GAAGAC	3 cut(s)	351, 782, 1730
Bbv12I	GWGCWC	1 cut(s)	572
BbvI	GCAGC	6 cut(s)	796, 1025, 1130, 1270, 1454, 1494
BccI	CCATC	9 cut(s)	41, 126, 746, 844, 1162, 1214, 1313, 1365, 1702
BcgI	CGANNNNNNTGC	2 cut(s)	1586, 1620
BciT130I	CCWGG	4 cut(s)	228, 525, 1214, 1363
BclI	TGATCA	3 cut(s)	889, 1096, 1630
BcoDI	GTCTC	4 cut(s)	979, 1052, 1281, 1762
BfaI	CTAG	7 cut(s)	144, 158, 183, 513, 957, 1280, 1676
BfmI	CTRYAG	2 cut(s)	1393, 1839
BfuAI	ACCTGC	1 cut(s)	446
BglII	AGATCT	1 cut(s)	1024
BisI	GCNGC	8 cut(s)	321, 810, 1014, 1144, 1284, 1443, 1508, 1625
BlsI	GCNGC	8 cut(s)	322, 811, 1015, 1145, 1285, 1444, 1509, 1626
Bme1390I	CCNGG	4 cut(s)	228, 525, 1214, 1363
Bme18I	GGWCC	1 cut(s)	1114
BmgT120I	GGNCC	5 cut(s)	996, 997, 1114, 1159, 1354
BmiI	GGNNCC	5 cut(s)	235, 736, 997, 998, 1618
BmrFI	CCNGG	4 cut(s)	228, 525, 1214, 1363
BmrI	ACTGGG	1 cut(s)	75
BmsI	GCATC	8 cut(s)	476, 498, 547, 769, 1184, 1610, 1777, 1808
BmuI	ACTGGG	1 cut(s)	75
BoxI	GACNNNNGTC	1 cut(s)	1774
BpiI	GAAGAC	3 cut(s)	351, 782, 1730
Bpu10I	CCTNAGC	1 cut(s)	923
Bpu14I	TTCGAA	1 cut(s)	793
BpuEI	CTTGAG	3 cut(s)	1334, 1571, 1757
Bsa29I	ATCGAT	1 cut(s)	1338
BsaBI	GATNNNNATC	2 cut(s)	25, 1224
BsaHI	GRCGYC	1 cut(s)	900
BsaI	GGTCTC	1 cut(s)	1052
BsaJI	CCNNGG	2 cut(s)	1200, 1361
Bsc4I	CCNNNNNNNGG	4 cut(s)	548, 1043, 1168, 1362
Bse1I	ACTGG	7 cut(s)	76, 81, 623, 1162, 1428, 1524, 1722
Bse3DI	GCAATG	1 cut(s)	510
Bse8I	GATNNNNATC	2 cut(s)	25, 1224
BseBI	CCWGG	4 cut(s)	228, 525, 1214, 1363
BseCI	ATCGAT	1 cut(s)	1338
BseDI	CCNNGG	2 cut(s)	1200, 1361
BseGI	GGATG	7 cut(s)	196, 562, 619, 1159, 1225, 1357, 1799
BseJI	GATNNNNATC	2 cut(s)	25, 1224
BseLI	CCNNNNNNNGG	4 cut(s)	548, 1043, 1168, 1362
BseMI	GCAATG	1 cut(s)	510
BseMII	CTCAG	3 cut(s)	315, 585, 1065
BseNI	ACTGG	7 cut(s)	76, 81, 623, 1162, 1428, 1524, 1722
BseSI	GKGCMC	1 cut(s)	1000
BseXI	GCAGC	6 cut(s)	796, 1025, 1130, 1270, 1454, 1494
Bsh1236I	CGCG	3 cut(s)	1119, 1622, 1624
BshFI	GGCC	5 cut(s)	51, 541, 998, 1161, 1355
BshNI	GGYRCC	1 cut(s)	1616
BshVI	ATCGAT	1 cut(s)	1338
BsiHKAI	GWGCWC	1 cut(s)	572
BslI	CCNNNNNNNGG	4 cut(s)	548, 1043, 1168, 1362
BsmAI	GTCTC	4 cut(s)	979, 1052, 1281, 1762
BsnI	GGCC	5 cut(s)	51, 541, 998, 1161, 1355
Bso31I	GGTCTC	1 cut(s)	1052
Bsp119I	TTCGAA	1 cut(s)	793
Bsp120I	GGGCCC	1 cut(s)	996
Bsp1286I	GDGCHC	2 cut(s)	572, 1000
Bsp143I	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
Bsp19I	CCATGG	1 cut(s)	1200
BspACI	CCGC	8 cut(s)	320, 934, 1087, 1117, 1463, 1620, 1624, 1810
BspANI	GGCC	5 cut(s)	51, 541, 998, 1161, 1355
BspCNI	CTCAG	3 cut(s)	316, 584, 1064
BspDI	ATCGAT	1 cut(s)	1338
BspFNI	CGCG	3 cut(s)	1119, 1622, 1624
BspHI	TCATGA	2 cut(s)	366, 1401
BspLI	GGNNCC	5 cut(s)	235, 736, 997, 998, 1618
BspMAI	CTGCAG	1 cut(s)	1397
BspMI	ACCTGC	1 cut(s)	446
BspPI	GGATC	5 cut(s)	28, 515, 729, 742, 1014
BspQI	GCTCTTC	2 cut(s)	438, 459
BspT104I	TTCGAA	1 cut(s)	793
BspT107I	GGYRCC	1 cut(s)	1616
BspTNI	GGTCTC	1 cut(s)	1052
BsrBI	CCGCTC	1 cut(s)	1465
BsrDI	GCAATG	1 cut(s)	510
BsrI	ACTGG	7 cut(s)	76, 81, 623, 1162, 1428, 1524, 1722
BssECI	CCNNGG	2 cut(s)	1200, 1361
BssMI	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
BssNI	GRCGYC	1 cut(s)	900
BssT1I	CCWWGG	1 cut(s)	1200
Bst2UI	CCWGG	4 cut(s)	228, 525, 1214, 1363
Bst4CI	ACNGT	4 cut(s)	826, 1331, 1639, 1645
Bst6I	CTCTTC	3 cut(s)	438, 459, 861
BstACI	GRCGYC	1 cut(s)	900
BstBI	TTCGAA	1 cut(s)	793
BstC8I	GCNNGC	5 cut(s)	7, 954, 1397, 1432, 1615
BstDEI	CTNAG	4 cut(s)	324, 571, 923, 1051
BstDSI	CCRYGG	1 cut(s)	1200
BstF5I	GGATG	7 cut(s)	196, 562, 619, 1159, 1225, 1357, 1799
BstFNI	CGCG	3 cut(s)	1119, 1622, 1624
BstHHI	GCGC	2 cut(s)	1512, 1624
BstKTI	GATC	8 cut(s)	23, 523, 737, 892, 1009, 1027, 1099, 1633
BstMAI	GTCTC	4 cut(s)	979, 1052, 1281, 1762
BstMBI	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
BstMWI	GCNNNNNNNGC	5 cut(s)	509, 576, 1238, 1619, 1796
BstNI	CCWGG	4 cut(s)	228, 525, 1214, 1363
BstNSI	RCATGY	1 cut(s)	1442
BstPAI	GACNNNNGTC	1 cut(s)	1774
BstSCI	CCNGG	4 cut(s)	226, 523, 1212, 1361
BstSFI	CTRYAG	2 cut(s)	1393, 1839
BstSLI	GKGCMC	1 cut(s)	1000
BstUI	CGCG	3 cut(s)	1119, 1622, 1624
BstV1I	GCAGC	6 cut(s)	796, 1025, 1130, 1270, 1454, 1494
BstV2I	GAAGAC	3 cut(s)	351, 782, 1730
BstX2I	RGATCY	3 cut(s)	20, 734, 1024
BstYI	RGATCY	3 cut(s)	20, 734, 1024
Bsu15I	ATCGAT	1 cut(s)	1338
BsuRI	GGCC	5 cut(s)	51, 541, 998, 1161, 1355
BsuTUI	ATCGAT	1 cut(s)	1338
BtgI	CCRYGG	1 cut(s)	1200
BtsCI	GGATG	7 cut(s)	196, 562, 619, 1159, 1225, 1357, 1799
BtsI	GCAGTG	1 cut(s)	1819
BtsIMutI	CAGTG	6 cut(s)	88, 634, 1059, 1184, 1421, 1819
BveI	ACCTGC	1 cut(s)	446
Cac8I	GCNNGC	5 cut(s)	7, 954, 1397, 1432, 1615
CciI	TCATGA	2 cut(s)	366, 1401
CfoI	GCGC	2 cut(s)	1512, 1624
Cfr13I	GGNCC	5 cut(s)	996, 997, 1114, 1159, 1354
ClaI	ATCGAT	1 cut(s)	1338
CseI	GACGC	2 cut(s)	282, 889
CsiI	ACCWGGT	1 cut(s)	1212
Csp6I	GTAC	3 cut(s)	960, 1048, 1134
CviQI	GTAC	3 cut(s)	960, 1048, 1134
DdeI	CTNAG	4 cut(s)	324, 571, 923, 1051
DpnI	GATC	8 cut(s)	22, 522, 736, 891, 1008, 1026, 1098, 1632
DpnII	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
EaeI	YGGCCR	1 cut(s)	49
Eam1104I	CTCTTC	3 cut(s)	438, 459, 861
EarI	CTCTTC	3 cut(s)	438, 459, 861
Ecl136II	GAGCTC	1 cut(s)	570
Eco130I	CCWWGG	1 cut(s)	1200
Eco24I	GRGCYC	2 cut(s)	572, 1000
Eco31I	GGTCTC	1 cut(s)	1052
Eco47I	GGWCC	1 cut(s)	1114
Eco53kI	GAGCTC	1 cut(s)	570
Eco57I	CTGAAG	2 cut(s)	51, 483
EcoICRI	GAGCTC	1 cut(s)	570
EcoO109I	RGGNCCY	1 cut(s)	996
EcoRII	CCWGG	4 cut(s)	226, 523, 1212, 1361
EcoT14I	CCWWGG	1 cut(s)	1200
EcoT22I	ATGCAT	1 cut(s)	491
EcoT38I	GRGCYC	2 cut(s)	572, 1000
ErhI	CCWWGG	1 cut(s)	1200
FalI	AAGNNNNNCTT	2 cut(s)	1002, 1034
FauI	CCCGC	1 cut(s)	1817
FbaI	TGATCA	3 cut(s)	889, 1096, 1630
Fnu4HI	GCNGC	8 cut(s)	321, 810, 1014, 1144, 1284, 1443, 1508, 1625
FokI	GGATG	7 cut(s)	203, 569, 606, 1166, 1232, 1344, 1786
FriOI	GRGCYC	2 cut(s)	572, 1000
Fsp4HI	GCNGC	8 cut(s)	321, 810, 1014, 1144, 1284, 1443, 1508, 1625
FspBI	CTAG	7 cut(s)	144, 158, 183, 513, 957, 1280, 1676
FspI	TGCGCA	1 cut(s)	1511
GlaI	GCGC	2 cut(s)	1511, 1623
GluI	GCNGC	8 cut(s)	321, 810, 1014, 1144, 1284, 1443, 1508, 1625
HaeIII	GGCC	5 cut(s)	51, 541, 998, 1161, 1355
HgaI	GACGC	2 cut(s)	282, 889
HhaI	GCGC	2 cut(s)	1512, 1624
Hin1I	GRCGYC	1 cut(s)	900
Hin6I	GCGC	2 cut(s)	1510, 1622
HinP1I	GCGC	2 cut(s)	1510, 1622
HincII	GTYRAC	1 cut(s)	1252
HindII	GTYRAC	1 cut(s)	1252
HpaI	GTTAAC	1 cut(s)	1252
HphI	GGTGA	3 cut(s)	32, 353, 1732
Hpy166II	GTNNAC	2 cut(s)	1134, 1252
Hpy188I	TCNGA	8 cut(s)	31, 104, 574, 894, 1378, 1543, 1672, 1786
Hpy8I	GTNNAC	2 cut(s)	1134, 1252
HpyAV	CCTTC	3 cut(s)	569, 889, 1675
HpyCH4III	ACNGT	4 cut(s)	826, 1331, 1639, 1645
HpyF10VI	GCNNNNNNNGC	5 cut(s)	509, 576, 1238, 1619, 1796
HpyF3I	CTNAG	4 cut(s)	324, 571, 923, 1051
Hsp92I	GRCGYC	1 cut(s)	900
HspAI	GCGC	2 cut(s)	1510, 1622
Ksp22I	TGATCA	3 cut(s)	889, 1096, 1630
KspAI	GTTAAC	1 cut(s)	1252
Kzo9I	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
LguI	GCTCTTC	2 cut(s)	438, 459
LmnI	GCTCC	6 cut(s)	233, 662, 708, 838, 1470, 1734
Lsp1109I	GCAGC	6 cut(s)	796, 1025, 1130, 1270, 1454, 1494
LweI	GCATC	8 cut(s)	476, 498, 547, 769, 1184, 1610, 1777, 1808
MabI	ACCWGGT	1 cut(s)	1212
MaeI	CTAG	7 cut(s)	144, 158, 183, 513, 957, 1280, 1676
MaeIII	GTNAC	3 cut(s)	83, 901, 1639
MalI	GATC	8 cut(s)	22, 522, 736, 891, 1008, 1026, 1098, 1632
MbiI	CCGCTC	1 cut(s)	1465
MboI	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
MboII	GAAGA	9 cut(s)	323, 356, 455, 476, 659, 782, 878, 1034, 1735
MfeI	CAATTG	2 cut(s)	406, 1001
MflI	RGATCY	3 cut(s)	20, 734, 1024
MhlI	GDGCHC	2 cut(s)	572, 1000
MlsI	TGGCCA	1 cut(s)	51
MluCI	AATT	9 cut(s)	260, 406, 493, 878, 976, 1001, 1268, 1323, 1886
MluNI	TGGCCA	1 cut(s)	51
MlyI	GAGTC	3 cut(s)	796, 1367, 1764
MmeI	TCCRAC	1 cut(s)	82
Mox20I	TGGCCA	1 cut(s)	51
Mph1103I	ATGCAT	1 cut(s)	491
MroXI	GAANNNNTTC	5 cut(s)	36, 468, 882, 1500, 1745
MscI	TGGCCA	1 cut(s)	51
MseI	TTAA	3 cut(s)	423, 1251, 1889
MslI	CAYNNNNRTG	2 cut(s)	45, 1109
Msp20I	TGGCCA	1 cut(s)	51
MspA1I	CMGCKG	1 cut(s)	1087
MspR9I	CCNGG	4 cut(s)	228, 525, 1214, 1363
MunI	CAATTG	2 cut(s)	406, 1001
MvaI	CCWGG	4 cut(s)	228, 525, 1214, 1363
MvnI	CGCG	3 cut(s)	1119, 1622, 1624
MwoI	GCNNNNNNNGC	5 cut(s)	509, 576, 1238, 1619, 1796
NcoI	CCATGG	1 cut(s)	1200
NdeII	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
NlaIV	GGNNCC	5 cut(s)	235, 736, 997, 998, 1618
NmuCI	GTSAC	3 cut(s)	83, 901, 1639
NsbI	TGCGCA	1 cut(s)	1511
NsiI	ATGCAT	1 cut(s)	491
NspI	RCATGY	1 cut(s)	1442
NspV	TTCGAA	1 cut(s)	793
PagI	TCATGA	2 cut(s)	366, 1401
PciSI	GCTCTTC	2 cut(s)	438, 459
PdmI	GAANNNNTTC	5 cut(s)	36, 468, 882, 1500, 1745
PfeI	GAWTC	9 cut(s)	361, 416, 688, 701, 856, 1090, 1121, 1576, 1817
PflFI	GACNNNGTC	1 cut(s)	89
PflMI	CCANNNNNTGG	1 cut(s)	1168
PkrI	GCNGC	8 cut(s)	322, 811, 1015, 1145, 1285, 1444, 1509, 1626
PleI	GAGTC	3 cut(s)	795, 1367, 1764
PpsI	GAGTC	3 cut(s)	795, 1367, 1764
PshAI	GACNNNNGTC	1 cut(s)	1774
PsiI	TTATAA	1 cut(s)	678
Psp124BI	GAGCTC	1 cut(s)	572
Psp6I	CCWGG	4 cut(s)	226, 523, 1212, 1361
PspGI	CCWGG	4 cut(s)	226, 523, 1212, 1361
PspN4I	GGNNCC	5 cut(s)	235, 736, 997, 998, 1618
PspOMI	GGGCCC	1 cut(s)	996
PspPI	GGNCC	5 cut(s)	996, 997, 1114, 1159, 1354
PstI	CTGCAG	1 cut(s)	1397
PsuI	RGATCY	3 cut(s)	20, 734, 1024
PsyI	GACNNNGTC	1 cut(s)	89
RsaI	GTAC	3 cut(s)	961, 1049, 1135
RsaNI	GTAC	3 cut(s)	960, 1048, 1134
RseI	CAYNNNNRTG	2 cut(s)	45, 1109
SacI	GAGCTC	1 cut(s)	572
SapI	GCTCTTC	2 cut(s)	438, 459
SaqAI	TTAA	3 cut(s)	423, 1251, 1889
SatI	GCNGC	8 cut(s)	321, 810, 1014, 1144, 1284, 1443, 1508, 1625
Sau3AI	GATC	8 cut(s)	20, 520, 734, 889, 1006, 1024, 1096, 1630
Sau96I	GGNCC	5 cut(s)	996, 997, 1114, 1159, 1354
SchI	GAGTC	3 cut(s)	796, 1367, 1764
ScrFI	CCNGG	4 cut(s)	228, 525, 1214, 1363
SduI	GDGCHC	2 cut(s)	572, 1000
SexAI	ACCWGGT	1 cut(s)	1212
SfaNI	GCATC	8 cut(s)	476, 498, 547, 769, 1184, 1610, 1777, 1808
SfcI	CTRYAG	2 cut(s)	1393, 1839
SfuI	TTCGAA	1 cut(s)	793
SinI	GGWCC	1 cut(s)	1114
SmiMI	CAYNNNNRTG	2 cut(s)	45, 1109
SmlI	CTYRAG	3 cut(s)	1349, 1550, 1772
SmoI	CTYRAG	3 cut(s)	1349, 1550, 1772
Sse9I	AATT	9 cut(s)	260, 406, 493, 878, 976, 1001, 1268, 1323, 1886
SsiI	CCGC	8 cut(s)	320, 934, 1087, 1117, 1463, 1620, 1624, 1810
SspMI	CTAG	7 cut(s)	144, 158, 183, 513, 957, 1280, 1676
SstI	GAGCTC	1 cut(s)	572
StyD4I	CCNGG	4 cut(s)	226, 523, 1212, 1361
StyI	CCWWGG	1 cut(s)	1200
TaaI	ACNGT	4 cut(s)	826, 1331, 1639, 1645
TaqI	TCGA	7 cut(s)	785, 793, 970, 1124, 1139, 1338, 1591
TasI	AATT	9 cut(s)	260, 406, 493, 878, 976, 1001, 1268, 1323, 1886
TatI	WGTACW	2 cut(s)	959, 1133
TauI	GCSGC	2 cut(s)	323, 1627
TfiI	GAWTC	9 cut(s)	361, 416, 688, 701, 856, 1090, 1121, 1576, 1817
Tru1I	TTAA	3 cut(s)	423, 1251, 1889
Tru9I	TTAA	3 cut(s)	423, 1251, 1889
TscAI	CASTG	6 cut(s)	88, 634, 1059, 1191, 1428, 1819
TseFI	GTSAC	3 cut(s)	83, 901, 1639
TseI	GCWGC	6 cut(s)	809, 1013, 1143, 1283, 1442, 1507
Tsp45I	GTSAC	3 cut(s)	83, 901, 1639
TspGWI	ACGGA	1 cut(s)	1457
TspRI	CASTG	6 cut(s)	88, 634, 1059, 1191, 1428, 1819
Tth111I	GACNNNGTC	1 cut(s)	89
Van91I	CCANNNNNTGG	1 cut(s)	1168
VpaK11BI	GGWCC	1 cut(s)	1114
XapI	RAATTY	4 cut(s)	260, 976, 1268, 1323
XbaI	TCTAGA	1 cut(s)	143
XceI	RCATGY	1 cut(s)	1442
XmnI	GAANNNNTTC	5 cut(s)	36, 468, 882, 1500, 1745
XspI	CTAG	7 cut(s)	144, 158, 183, 513, 957, 1280, 1676
Zsp2I	ATGCAT	1 cut(s)	491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.