RchiOBHm_Chr4g0415221

Protein-lysine methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
39829416 .. 39831327
1912 bp
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UTR
Exon/CDS
Intron
PRQ38552

Sequence Viewer

Length: 129 bp
ATGGATTTGGAAGTTTTGGGGCATGAGTTGCAGTTCATTCAGGATCCTAATTCAAAGCATCTAGGAACTACGGTTTGGGATGCATCACTGGTATTCGCCAAGTTTCTGGCAATGACTGTAACCCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

42

Amino Acids

4.72

Weight (kDa)

4.8

Isoelectric Point (pI)

15.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018552)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 38, 51
AgsI TTSAA 1 cut(s) 54
AjuI GAANNNNNNNTTGG 2 cut(s) 58, 90
AlwI GGATC 2 cut(s) 38, 51
BamHI GGATCC 1 cut(s) 43
BfaI CTAG 2 cut(s) 62, 127
BmiI GGNNCC 1 cut(s) 45
BmsI GCATC 3 cut(s) 67, 70, 92
Bse1I ACTGG 1 cut(s) 93
Bse3DI GCAATG 1 cut(s) 117
BseGI GGATG 1 cut(s) 85
BseMI GCAATG 1 cut(s) 117
BseNI ACTGG 1 cut(s) 93
Bsp143I GATC 1 cut(s) 43
BspLI GGNNCC 1 cut(s) 45
BspPI GGATC 2 cut(s) 38, 51
BsrDI GCAATG 1 cut(s) 117
BsrI ACTGG 1 cut(s) 93
BssMI GATC 1 cut(s) 43
Bst4CI ACNGT 2 cut(s) 73, 118
BstAPI GCANNNNNTGC 1 cut(s) 28
BstF5I GGATG 1 cut(s) 85
BstKTI GATC 1 cut(s) 46
BstMBI GATC 1 cut(s) 43
BstMWI GCNNNNNNNGC 1 cut(s) 28
BstX2I RGATCY 1 cut(s) 43
BstXI CCANNNNNNTGG 1 cut(s) 106
BstYI RGATCY 1 cut(s) 43
BtsCI GGATG 1 cut(s) 85
BtsIMutI CAGTG 1 cut(s) 86
CviAII CATG 1 cut(s) 23
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
EcoT22I ATGCAT 1 cut(s) 85
FaeI CATG 1 cut(s) 26
FaiI YATR 1 cut(s) 24
FatI CATG 1 cut(s) 22
FokI GGATG 1 cut(s) 92
FspBI CTAG 2 cut(s) 62, 127
Hin1II CATG 1 cut(s) 26
Hpy188III TCNNGA 1 cut(s) 41
HpyCH4III ACNGT 2 cut(s) 73, 118
HpyCH4V TGCA 2 cut(s) 31, 83
HpyF10VI GCNNNNNNNGC 1 cut(s) 28
Hsp92II CATG 1 cut(s) 26
Kzo9I GATC 1 cut(s) 43
LpnPI CCDG 3 cut(s) 26, 74, 92
LweI GCATC 3 cut(s) 67, 70, 92
MaeI CTAG 2 cut(s) 62, 127
MaeIII GTNAC 1 cut(s) 118
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MflI RGATCY 1 cut(s) 43
MluCI AATT 1 cut(s) 49
Mph1103I ATGCAT 1 cut(s) 85
MwoI GCNNNNNNNGC 1 cut(s) 28
NdeII GATC 1 cut(s) 43
NlaIII CATG 1 cut(s) 26
NlaIV GGNNCC 1 cut(s) 45
NsiI ATGCAT 1 cut(s) 85
PspN4I GGNNCC 1 cut(s) 45
PsuI RGATCY 1 cut(s) 43
Sau3AI GATC 1 cut(s) 43
SfaNI GCATC 3 cut(s) 67, 70, 92
SgeI CNNG 6 cut(s) 35, 53, 74, 101, 112, 119
Sse9I AATT 1 cut(s) 49
SspMI CTAG 2 cut(s) 62, 127
TaaI ACNGT 2 cut(s) 73, 118
TasI AATT 1 cut(s) 49
TscAI CASTG 1 cut(s) 93
TspDTI ATGAA 1 cut(s) 25
TspRI CASTG 1 cut(s) 93
XspI CTAG 2 cut(s) 62, 127
Zsp2I ATGCAT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.