Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013844

Physical Location & Seq

Genomic Coordinates Forward (+)

52202201 .. 52205299

Gene Structure 3099 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39581

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGCCAGCACACACTACTGTCAACTATATCGTCAATCCTAATCGACTTTCATCACCACCAGCCAGAGATCAGACCCGACCCGAGTCCGTGATCGGAGGACCCGAAATGGCGCGGAAGAAGATCAGAGAGTACGATTCGAAGAGACTGCTGAAGCAGCACTTGAAGCGAGTCGCCGGAATCGACCTCCAGATCAACTCGGCTCAGGTGACGGAGGCGACCGACTTCACCGAATTGGCCAACAACGAGACATGGCTGTCGTCGACCAGACTCGTCGTCAAGCCGGACATGCTGTTCGGGAAGCGCGGGAAGAGCGGCCTCGTCGCGCTCAATTTGGACATGGCTCAGGTCGCCGACTTCGTCAAGCAGCGTCTCGGTAAGGAGGTTGAGATGGGAGGGTGTAAGGCGCCTATAACGACGTTTATAGTGGAGCCGTTTATGCCTCATGACCAAGAGTTTTACCTCTCGATTGTATCCGAAAGGCTTGGAAGCACGATAAGCTTTTCGGAGTGCGGAGGTATTGAAATTGAAGAGAATTGGGACAAGGTCAAGACTATTTTTCTTCCAACCGAGAAGTCTCTGACGAATGAGGCTTGTGCTCCGCTGATTGCTACTCTTCCACTGGAGGTCAAGGAGAAAATTGGAGATTTCATAAAAGCCGTATTTACTGTATTTCAGGATTTGGATTTTAGCTTCCTGGAAATGAACCCGTTTACCTTGGTTAATGGTGAACCTTTTCCATTAGATATGAGGGGGGAGCTAGATGACACTGCGGCTTTCAAGAACTTCAACAAATGGGGTAATGTGGAGTTTCCACTGCCTTTTGGCAGAGTTTTAAGTCCAACAGAAACATTTATTCATACTTTGGATGAAAAGACAAGTGCGTCCTTAAAATTCACAGTGCTGAATCCAAAAGGACGCATCTGGACCATGGTAGCTGGAGGTGGTGCAAGCGTTATTTATGCTGATACTGTTGGAGATTTGGGTTATGCATCAGAACTTGGAAACTATGCAGAGTATAGTGGAGCTCCAAATGAAGAAGAGGTGTTGCAATATGCAAGAGTAGTGATTGATTGTGCAACAGCAAATCCAGATGGTCGTAAAAGAGCTCTTCTGATTGGAGGTGGTATAGCTAATTTCACAGATGTTGCTGCTACATTTAATGGAATTATTAGAGCGCTGAAGGAGAAGGAATCCAAGCTCAAAGCGTCGAGAATGCATATATATGTAAGAAGGGGTGGTCCAAACTATCAAACTGGTTTGGCAAAGATGCGTGCATTAGGAGATGAACTTGGTGTTCCTCTTGAGGTTTATGGGCCTGAGGCAACTATGACAGGAATTTGTAAGGAAGCAATTGATTGCGTCATGAGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003878 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006084 GO:0006085 GO:0006139 GO:0006163 GO:0006164 GO:0006629 GO:0006631 GO:0006633 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009346 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0032787 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046394 GO:0046483 GO:0046912 GO:0051186 GO:0051188 GO:0055086 GO:0071616 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00020 ko00720 ko01100 ko01110 ko01120 ko01130 map00020 map00720 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

ATP-grasp_2 Citrate_bind

Protein Analysis

457

Amino Acids

50.35

Weight (kDa)

5.39

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synth_N	PF24948	37 - 265	7.9e-74	ATP-citrate synthase ATP-grasp domain
ATP-grasp_2	PF08442	41 - 238	5.8e-18	ATP-grasp domain
Citrate_bind	PF16114	276 - 452	1.9e-84	ATP citrate lyase citrate-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013844)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09430
fragaria_vesca	FvH4_4g21220
malus_domestica	MD13G1143800.v1.1
prunus_persica	Prupe.1G108300_v2.0.a1 Prupe.6G110400_v2.0.a1
pyrus_communis	pycom13g12470
rosa_chinensis	RchiOBHm_Chr4g0426831
rosa_laevigata	RLG00000007274
rosa_multiflora	Rmu_sc0000953.1_g000013 Rmu_sc0004341.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368800
rosa_rugosa	Rorug04G0215200
rosa_samantha	Rh4AG270200 Rh4BG276500 Rh4CG291300 Rh4DG273800
rosa_wichuraiana	Rw4G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	253, 880
AccB1I	GGYRCC	1 cut(s)	403
AccBSI	CCGCTC	1 cut(s)	312
AccI	GTMKAC	1 cut(s)	260
AccII	CGCG	3 cut(s)	112, 303, 323
AciI	CCGC	6 cut(s)	112, 303, 312, 510, 599, 770
AcoI	YGGCCR	1 cut(s)	234
AcsI	RAATTY	2 cut(s)	890, 1335
AcuI	CTGAAG	2 cut(s)	170, 1199
AcyI	GRCGYC	1 cut(s)	404
AfaI	GTAC	1 cut(s)	131
AfeI	AGCGCT	1 cut(s)	1176
AgsI	TTSAA	5 cut(s)	163, 521, 527, 778, 787
AhdI	GACNNNNNGTC	1 cut(s)	272
AjnI	CCWGG	1 cut(s)	693
AloI	GAACNNNNNNTCC	2 cut(s)	275, 307
AluBI	AGCT	8 cut(s)	498, 690, 757, 935, 1025, 1106, 1130, 1198
AluI	AGCT	8 cut(s)	498, 690, 757, 935, 1025, 1106, 1130, 1198
Alw21I	GWGCWC	3 cut(s)	598, 1027, 1108
Alw26I	GTCTC	4 cut(s)	136, 239, 374, 579
Ama87I	CYCGRG	1 cut(s)	80
Aor51HI	AGCGCT	1 cut(s)	1176
AoxI	GGCC	3 cut(s)	234, 313, 1313
ApeKI	GCWGC	3 cut(s)	154, 364, 1148
ApoI	RAATTY	2 cut(s)	890, 1335
ArsI	GACNNNNNNTTYG	2 cut(s)	275, 307
Asp700I	GAANNNNTTC	1 cut(s)	732
AspLEI	GCGC	5 cut(s)	112, 303, 325, 406, 1177
AspS9I	GGNCC	4 cut(s)	98, 924, 1238, 1313
AsuHPI	GGTGA	4 cut(s)	45, 217, 217, 737
AsuII	TTCGAA	1 cut(s)	137
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	3 cut(s)	98, 924, 1238
AxyI	CCTNAGG	1 cut(s)	1317
BalI	TGGCCA	1 cut(s)	236
BanI	GGYRCC	1 cut(s)	403
BanII	GRGCYC	2 cut(s)	1027, 1108
Bbv12I	GWGCWC	3 cut(s)	598, 1027, 1108
BbvI	GCAGC	3 cut(s)	166, 376, 1135
BccI	CCATC	2 cut(s)	382, 1085
BceAI	ACGGC	2 cut(s)	415, 641
BcgI	CGANNNNNNTGC	2 cut(s)	127, 161
BciT130I	CCWGG	1 cut(s)	695
BciVI	GTATCC	1 cut(s)	481
BcoDI	GTCTC	4 cut(s)	136, 239, 374, 579
BfaI	CTAG	1 cut(s)	758
BfoI	RGCGCY	2 cut(s)	407, 1178
BfuI	GTATCC	1 cut(s)	481
BisI	GCNGC	5 cut(s)	155, 313, 365, 771, 1149
BlsI	GCNGC	5 cut(s)	156, 314, 366, 772, 1150
Bme1390I	CCNGG	1 cut(s)	695
Bme18I	GGWCC	3 cut(s)	98, 924, 1238
BmeRI	GACNNNNNGTC	1 cut(s)	272
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	4 cut(s)	98, 924, 1238, 1313
BmiI	GGNNCC	3 cut(s)	100, 405, 429
BmrFI	CCNGG	1 cut(s)	695
BmsI	GCATC	3 cut(s)	927, 998, 1257
BoxI	GACNNNNGTC	1 cut(s)	82
BpmI	CTGGAG	3 cut(s)	170, 641, 957
Bpu10I	CCTNAGC	2 cut(s)	201, 342
Bpu14I	TTCGAA	1 cut(s)	137
BpuEI	CTTGAG	1 cut(s)	1322
BsaHI	GRCGYC	1 cut(s)	404
BsaJI	CCNNGG	2 cut(s)	714, 927
Bse1I	ACTGG	2 cut(s)	624, 1258
Bse21I	CCTNAGG	1 cut(s)	1317
BseBI	CCWGG	1 cut(s)	695
BseDI	CCNNGG	2 cut(s)	714, 927
BseGI	GGATG	1 cut(s)	871
BseMII	CTCAG	3 cut(s)	215, 356, 1308
BseNI	ACTGG	2 cut(s)	624, 1258
BseXI	GCAGC	3 cut(s)	166, 376, 1135
Bsh1236I	CGCG	3 cut(s)	112, 303, 323
Bsh1285I	CGRYCG	1 cut(s)	219
BshFI	GGCC	3 cut(s)	236, 315, 1315
BshNI	GGYRCC	1 cut(s)	403
BsiEI	CGRYCG	1 cut(s)	219
BsiHKAI	GWGCWC	3 cut(s)	598, 1027, 1108
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	2 cut(s)	174, 281
BslFI	GGGAC	1 cut(s)	551
BsmAI	GTCTC	4 cut(s)	136, 239, 374, 579
BsmBI	CGTCTC	1 cut(s)	374
BsmFI	GGGAC	1 cut(s)	551
BsmI	GAATGC	1 cut(s)	1218
BsnI	GGCC	3 cut(s)	236, 315, 1315
BsoBI	CYCGRG	1 cut(s)	80
Bsp119I	TTCGAA	1 cut(s)	137
Bsp1286I	GDGCHC	3 cut(s)	598, 1027, 1108
Bsp143I	GATC	4 cut(s)	67, 90, 120, 189
Bsp19I	CCATGG	1 cut(s)	927
BspACI	CCGC	6 cut(s)	112, 303, 312, 510, 599, 770
BspANI	GGCC	3 cut(s)	236, 315, 1315
BspCNI	CTCAG	3 cut(s)	214, 355, 1309
BspFNI	CGCG	3 cut(s)	112, 303, 323
BspHI	TCATGA	2 cut(s)	442, 1362
BspLI	GGNNCC	3 cut(s)	100, 405, 429
BspQI	GCTCTTC	2 cut(s)	302, 1113
BspT104I	TTCGAA	1 cut(s)	137
BspT107I	GGYRCC	1 cut(s)	403
BsrBI	CCGCTC	1 cut(s)	312
BsrI	ACTGG	2 cut(s)	624, 1258
BssECI	CCNNGG	2 cut(s)	714, 927
BssMI	GATC	4 cut(s)	67, 90, 120, 189
BssNI	GRCGYC	1 cut(s)	404
BssT1I	CCWWGG	2 cut(s)	714, 927
Bst2UI	CCWGG	1 cut(s)	695
Bst4CI	ACNGT	4 cut(s)	19, 667, 898, 970
Bst6I	CTCTTC	6 cut(s)	134, 302, 522, 618, 1032, 1113
BstACI	GRCGYC	1 cut(s)	404
BstBI	TTCGAA	1 cut(s)	137
BstC8I	GCNNGC	3 cut(s)	6, 949, 1272
BstDEI	CTNAG	3 cut(s)	201, 342, 1317
BstDSI	CCRYGG	1 cut(s)	927
BstF5I	GGATG	1 cut(s)	871
BstFNI	CGCG	3 cut(s)	112, 303, 323
BstH2I	RGCGCY	2 cut(s)	407, 1178
BstHHI	GCGC	5 cut(s)	112, 303, 325, 406, 1177
BstKTI	GATC	4 cut(s)	70, 93, 123, 192
BstMAI	GTCTC	4 cut(s)	136, 239, 374, 579
BstMBI	GATC	4 cut(s)	67, 90, 120, 189
BstMCI	CGRYCG	1 cut(s)	219
BstMWI	GCNNNNNNNGC	7 cut(s)	154, 163, 286, 309, 347, 436, 495
BstNI	CCWGG	1 cut(s)	695
BstNSI	RCATGY	1 cut(s)	289
BstPAI	GACNNNNGTC	1 cut(s)	82
BstSCI	CCNGG	1 cut(s)	693
BstUI	CGCG	3 cut(s)	112, 303, 323
BstV1I	GCAGC	3 cut(s)	166, 376, 1135
Bsu36I	CCTNAGG	1 cut(s)	1317
BsuI	GTATCC	1 cut(s)	481
BsuRI	GGCC	3 cut(s)	236, 315, 1315
BtgI	CCRYGG	1 cut(s)	927
BtsCI	GGATG	1 cut(s)	871
BtsI	GCAGTG	2 cut(s)	765, 812
BtsIMutI	CAGTG	4 cut(s)	617, 765, 812, 903
Cac8I	GCNNGC	3 cut(s)	6, 949, 1272
CciI	TCATGA	2 cut(s)	442, 1362
CfoI	GCGC	5 cut(s)	112, 303, 325, 406, 1177
Cfr13I	GGNCC	4 cut(s)	98, 924, 1238, 1313
CseI	GACGC	5 cut(s)	356, 870, 924, 1194, 1348
Csp6I	GTAC	1 cut(s)	130
CviAII	CATG	6 cut(s)	249, 286, 337, 443, 928, 1363
CviQI	GTAC	1 cut(s)	130
DdeI	CTNAG	3 cut(s)	201, 342, 1317
DinI	GGCGCC	1 cut(s)	405
DpnI	GATC	4 cut(s)	69, 92, 122, 191
DpnII	GATC	4 cut(s)	67, 90, 120, 189
DrdI	GACNNNNNNGTC	2 cut(s)	253, 880
DriI	GACNNNNNGTC	1 cut(s)	272
DseDI	GACNNNNNNGTC	2 cut(s)	253, 880
EaeI	YGGCCR	1 cut(s)	234
Eam1104I	CTCTTC	6 cut(s)	134, 302, 522, 618, 1032, 1113
Eam1105I	GACNNNNNGTC	1 cut(s)	272
EarI	CTCTTC	6 cut(s)	134, 302, 522, 618, 1032, 1113
Ecl136II	GAGCTC	2 cut(s)	1025, 1106
Eco130I	CCWWGG	2 cut(s)	714, 927
Eco24I	GRGCYC	2 cut(s)	1027, 1108
Eco47I	GGWCC	3 cut(s)	98, 924, 1238
Eco47III	AGCGCT	1 cut(s)	1176
Eco53kI	GAGCTC	2 cut(s)	1025, 1106
Eco57I	CTGAAG	2 cut(s)	170, 1199
Eco81I	CCTNAGG	1 cut(s)	1317
Eco88I	CYCGRG	1 cut(s)	80
EcoICRI	GAGCTC	2 cut(s)	1025, 1106
EcoO109I	RGGNCCY	1 cut(s)	98
EcoRII	CCWGG	1 cut(s)	693
EcoT14I	CCWWGG	2 cut(s)	714, 927
EcoT22I	ATGCAT	2 cut(s)	991, 1218
EcoT38I	GRGCYC	2 cut(s)	1027, 1108
EgeI	GGCGCC	1 cut(s)	405
EheI	GGCGCC	1 cut(s)	405
ErhI	CCWWGG	2 cut(s)	714, 927
Esp3I	CGTCTC	1 cut(s)	374
FaeI	CATG	6 cut(s)	252, 289, 340, 446, 931, 1366
FalI	AAGNNNNNCTT	2 cut(s)	143, 175
FaqI	GGGAC	1 cut(s)	551
FatI	CATG	6 cut(s)	248, 285, 336, 442, 927, 1362
FauI	CCCGC	1 cut(s)	296
FblI	GTMKAC	1 cut(s)	260
Fnu4HI	GCNGC	5 cut(s)	155, 313, 365, 771, 1149
FokI	GGATG	1 cut(s)	878
FriOI	GRGCYC	2 cut(s)	1027, 1108
Fsp4HI	GCNGC	5 cut(s)	155, 313, 365, 771, 1149
FspBI	CTAG	1 cut(s)	758
GlaI	GCGC	5 cut(s)	111, 302, 324, 405, 1176
GluI	GCNGC	5 cut(s)	155, 313, 365, 771, 1149
GsuI	CTGGAG	3 cut(s)	170, 641, 957
HaeII	RGCGCY	2 cut(s)	407, 1178
HaeIII	GGCC	3 cut(s)	236, 315, 1315
HapII	CCGG	2 cut(s)	174, 281
HgaI	GACGC	5 cut(s)	356, 870, 924, 1194, 1348
HhaI	GCGC	5 cut(s)	112, 303, 325, 406, 1177
Hin1I	GRCGYC	1 cut(s)	404
Hin1II	CATG	6 cut(s)	252, 289, 340, 446, 931, 1366
Hin6I	GCGC	5 cut(s)	110, 301, 323, 404, 1175
HinP1I	GCGC	5 cut(s)	110, 301, 323, 404, 1175
HincII	GTYRAC	2 cut(s)	22, 261
HindII	GTYRAC	2 cut(s)	22, 261
HindIII	AAGCTT	1 cut(s)	496
HinfI	GANTC	7 cut(s)	83, 134, 168, 177, 267, 904, 1190
HpaII	CCGG	2 cut(s)	174, 281
HphI	GGTGA	4 cut(s)	45, 217, 217, 737
Hpy166II	GTNNAC	4 cut(s)	22, 261, 711, 728
Hpy188I	TCNGA	8 cut(s)	72, 95, 125, 475, 505, 579, 994, 1113
Hpy8I	GTNNAC	4 cut(s)	22, 261, 711, 728
Hpy99I	CGWCG	5 cut(s)	262, 275, 323, 418, 1210
HpyAV	CCTTC	3 cut(s)	1174, 1180, 1224
HpyCH4III	ACNGT	4 cut(s)	19, 667, 898, 970
HpyCH4IV	ACGT	1 cut(s)	416
HpyCH4V	TGCA	8 cut(s)	947, 989, 1010, 1048, 1055, 1076, 1216, 1274
HpyF10VI	GCNNNNNNNGC	7 cut(s)	154, 163, 286, 309, 347, 436, 495
HpyF3I	CTNAG	3 cut(s)	201, 342, 1317
HpySE526I	ACGT	1 cut(s)	416
Hsp92I	GRCGYC	1 cut(s)	404
Hsp92II	CATG	6 cut(s)	252, 289, 340, 446, 931, 1366
HspAI	GCGC	5 cut(s)	110, 301, 323, 404, 1175
KasI	GGCGCC	1 cut(s)	403
Kzo9I	GATC	4 cut(s)	67, 90, 120, 189
LguI	GCTCTTC	2 cut(s)	302, 1113
LmnI	GCTCC	5 cut(s)	427, 601, 754, 1022, 1030
Lsp1109I	GCAGC	3 cut(s)	166, 376, 1135
LweI	GCATC	3 cut(s)	927, 998, 1257
MaeI	CTAG	1 cut(s)	758
MaeII	ACGT	1 cut(s)	416
MaeIII	GTNAC	1 cut(s)	205
MalI	GATC	4 cut(s)	69, 92, 122, 191
MbiI	CCGCTC	1 cut(s)	312
MboI	GATC	4 cut(s)	67, 90, 120, 189
MfeI	CAATTG	1 cut(s)	1350
MhlI	GDGCHC	3 cut(s)	598, 1027, 1108
MlsI	TGGCCA	1 cut(s)	236
MluNI	TGGCCA	1 cut(s)	236
Mly113I	GGCGCC	1 cut(s)	404
MlyI	GAGTC	3 cut(s)	92, 177, 261
MmeI	TCCRAC	3 cut(s)	587, 863, 952
Mox20I	TGGCCA	1 cut(s)	236
Mph1103I	ATGCAT	2 cut(s)	991, 1218
MroXI	GAANNNNTTC	1 cut(s)	732
MscI	TGGCCA	1 cut(s)	236
MseI	TTAA	4 cut(s)	720, 833, 887, 1158
MslI	CAYNNNNRTG	1 cut(s)	1221
Msp20I	TGGCCA	1 cut(s)	236
MspA1I	CMGCKG	1 cut(s)	601
MspI	CCGG	2 cut(s)	174, 281
MspR9I	CCNGG	1 cut(s)	695
MunI	CAATTG	1 cut(s)	1350
Mva1269I	GAATGC	1 cut(s)	1218
MvaI	CCWGG	1 cut(s)	695
MvnI	CGCG	3 cut(s)	112, 303, 323
MwoI	GCNNNNNNNGC	7 cut(s)	154, 163, 286, 309, 347, 436, 495
NarI	GGCGCC	1 cut(s)	404
NcoI	CCATGG	1 cut(s)	927
NdeII	GATC	4 cut(s)	67, 90, 120, 189
NlaIII	CATG	6 cut(s)	252, 289, 340, 446, 931, 1366
NlaIV	GGNNCC	3 cut(s)	100, 405, 429
NmeAIII	GCCGAG	1 cut(s)	176
NmuCI	GTSAC	1 cut(s)	205
NsiI	ATGCAT	2 cut(s)	991, 1218
NspI	RCATGY	1 cut(s)	289
NspV	TTCGAA	1 cut(s)	137
PagI	TCATGA	2 cut(s)	442, 1362
PciSI	GCTCTTC	2 cut(s)	302, 1113
PcsI	WCGNNNNNNNCGW	3 cut(s)	99, 177, 354
PctI	GAATGC	1 cut(s)	1218
PdmI	GAANNNNTTC	1 cut(s)	732
PfeI	GAWTC	4 cut(s)	134, 177, 904, 1190
PflFI	GACNNNGTC	2 cut(s)	356, 542
PfoI	TCCNGGA	1 cut(s)	693
PkrI	GCNGC	5 cut(s)	156, 314, 366, 772, 1150
PleI	GAGTC	3 cut(s)	91, 176, 261
PluTI	GGCGCC	1 cut(s)	407
PpsI	GAGTC	3 cut(s)	91, 176, 261
PpuMI	RGGWCCY	1 cut(s)	98
PshAI	GACNNNNGTC	1 cut(s)	82
Psp124BI	GAGCTC	2 cut(s)	1027, 1108
Psp5II	RGGWCCY	1 cut(s)	98
Psp6I	CCWGG	1 cut(s)	693
PspGI	CCWGG	1 cut(s)	693
PspN4I	GGNNCC	3 cut(s)	100, 405, 429
PspPI	GGNCC	4 cut(s)	98, 924, 1238, 1313
PspPPI	RGGWCCY	1 cut(s)	98
PsyI	GACNNNGTC	2 cut(s)	356, 542
RsaI	GTAC	1 cut(s)	131
RsaNI	GTAC	1 cut(s)	130
RseI	CAYNNNNRTG	1 cut(s)	1221
SacI	GAGCTC	2 cut(s)	1027, 1108
SalI	GTCGAC	1 cut(s)	259
SapI	GCTCTTC	2 cut(s)	302, 1113
SaqAI	TTAA	4 cut(s)	720, 833, 887, 1158
SatI	GCNGC	5 cut(s)	155, 313, 365, 771, 1149
Sau3AI	GATC	4 cut(s)	67, 90, 120, 189
Sau96I	GGNCC	4 cut(s)	98, 924, 1238, 1313
SchI	GAGTC	3 cut(s)	92, 177, 261
ScrFI	CCNGG	1 cut(s)	695
SduI	GDGCHC	3 cut(s)	598, 1027, 1108
SfaNI	GCATC	3 cut(s)	927, 998, 1257
SfoI	GGCGCC	1 cut(s)	405
SfuI	TTCGAA	1 cut(s)	137
SinI	GGWCC	3 cut(s)	98, 924, 1238
SmiMI	CAYNNNNRTG	1 cut(s)	1221
SmlI	CTYRAG	1 cut(s)	1301
SmoI	CTYRAG	1 cut(s)	1301
SsiI	CCGC	6 cut(s)	112, 303, 312, 510, 599, 770
SspDI	GGCGCC	1 cut(s)	403
SspMI	CTAG	1 cut(s)	758
SstI	GAGCTC	2 cut(s)	1027, 1108
StyD4I	CCNGG	1 cut(s)	693
StyI	CCWWGG	2 cut(s)	714, 927
TaaI	ACNGT	4 cut(s)	19, 667, 898, 970
TaiI	ACGT	1 cut(s)	419
TaqI	TCGA	6 cut(s)	43, 137, 180, 260, 464, 1208
TaqII	GACCGA	1 cut(s)	233
TauI	GCSGC	2 cut(s)	315, 773
TfiI	GAWTC	4 cut(s)	134, 177, 904, 1190
Tru1I	TTAA	4 cut(s)	720, 833, 887, 1158
Tru9I	TTAA	4 cut(s)	720, 833, 887, 1158
TscAI	CASTG	4 cut(s)	624, 772, 819, 903
TseFI	GTSAC	1 cut(s)	205
TseI	GCWGC	3 cut(s)	154, 364, 1148
Tsp45I	GTSAC	1 cut(s)	205
TspDTI	ATGAA	7 cut(s)	39, 637, 716, 845, 882, 1047, 1299
TspGWI	ACGGA	2 cut(s)	76, 224
TspRI	CASTG	4 cut(s)	624, 772, 819, 903
Tth111I	GACNNNGTC	2 cut(s)	356, 542
VpaK11BI	GGWCC	3 cut(s)	98, 924, 1238
XapI	RAATTY	2 cut(s)	890, 1335
XceI	RCATGY	1 cut(s)	289
XmiI	GTMKAC	1 cut(s)	260
XmnI	GAANNNNTTC	1 cut(s)	732
XspI	CTAG	1 cut(s)	758
Zsp2I	ATGCAT	2 cut(s)	991, 1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.