Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0013844

Physical Location & Seq

Genomic Coordinates Forward (+)

50527829 .. 50530984

Gene Structure 3156 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00368800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGCTACTATATGCCAGCACACACTACTGTCAACTATATCGTCAATCCTCATCGACTTTCATCACCACCAGCCAGAGATCAGACCCGACCCGAGTCAGAGGAAGCGTGATCGGAGGGCCCGAAATGGCGCGGAAGAAGATCAGAGAGTACGATTCGAAGAGACTGCTGAAGCAGCACTTGAAGCGAGTCGCCGGAATCGACCTCCAGATCAACTCGGCTCAGGTGACGGAGGCCACGGACTTCGCCGAATTGGCCAACAACGAGACATGGCTATCGTCGACCAGACTCGTCGTCAAGCCGGACATGCTGTTCGGGAAGCGCGGGAAGAGTGGCCTCGTCGCGCTCAATTTGGACATGGCTCAGGTCGCCGACTTCGTCAAGCAGCGTCTCGGTAAGGAGGTTGAGATGGGAGGGTGTAAGGCGCCTATAACGACGTTTATAGTGGAGCCGTTTATGCCTCATGATCAAGAGTTTTACCTCTCGATTGTATCCGAAAGGCTCGGGAGCACGATAAGCTTTTCCGAGTGTGGAGGTATCGAGATTGAAGAGAATTGGGACAAGGTCAAGACTATTTTTATTCCAACCGAGAAGTCTCTGACGAATGAGGCATGTGCTCCGCTGATTGCTACTCTTCCACTGGAGGTCAAGGAGAAAATTGGAGATTTCATAAAAGCCGTATTTGCTGTATTTCAGGGGGAGCTAGATGACACTGCTGCTTTCAAGAACTTCAACAAATGGGGTAATGTGGAGTTTCCACTGCCTTTTGGCAGAGTTTTAAGTCCAACAGAAACATTTATTCATACTTTGGATGAAAAGACAAGTGCGTCCTTAAAATTCACAGTGCTGAATCCAAAAGGACGCATCTGGACCATGGTAGCTGGAGGTGGTGCAAGCGTTATTTATGCTGATACTGTTGGAGATTTGGGTTATGCATCAGAACTTGGAAACTATGCAGAGTATAGTGGAGCTCCAAATGAAGAAGAGGTGTTGCAATATGCAAGAGTAGTGATTGATTGTGCAACAGCAAATCCAGATGGTCGTAAAAGAGCTCTTCTGATTGGAGGTGGTATAGCTAATTTCACAGATGTTGCGGCTACATTTAATGGAATTATTAGAGCGCTGAGGGAGAAGGATTCCAAGCTCAAAGCGTCGAGAATGCATATATATGTAAGAAGGGGTGGTCCAAACTATCAAACTGGTTTGGCAAAGATGCGTGCATTAGGAGATGAACTTGGTGTTCCTCTTGAGGTTTATGGGCCTGAGGCAACTATGACAGGAATTTGTAAGGAAGCAATTGATTGCATCATGAGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003878 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006084 GO:0006085 GO:0006139 GO:0006163 GO:0006164 GO:0006629 GO:0006631 GO:0006633 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009346 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0032787 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046394 GO:0046483 GO:0046912 GO:0051186 GO:0051188 GO:0055086 GO:0071616 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00020 ko00720 ko01100 ko01110 ko01120 ko01130 map00020 map00720 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

ATP-grasp_2 Citrate_bind

Protein Analysis

438

Amino Acids

48.19

Weight (kDa)

6.1

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synth_N	PF24948	43 - 231	5.1e-57	ATP-citrate synthase ATP-grasp domain
ATP-grasp_2	PF08442	47 - 231	3.4e-14	ATP-grasp domain
Citrate_bind	PF16114	257 - 433	2.9e-84	ATP citrate lyase citrate-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013844)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09430
fragaria_vesca	FvH4_4g21220
malus_domestica	MD13G1143800.v1.1
prunus_persica	Prupe.1G108300_v2.0.a1 Prupe.6G110400_v2.0.a1
pyrus_communis	pycom13g12470
rosa_chinensis	RchiOBHm_Chr4g0426831
rosa_laevigata	RLG00000007274
rosa_multiflora	Rmu_sc0000953.1_g000013 Rmu_sc0004341.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368800
rosa_rugosa	Rorug04G0215200
rosa_samantha	Rh4AG270200 Rh4BG276500 Rh4CG291300 Rh4DG273800
rosa_wichuraiana	Rw4G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	823
AccB1I	GGYRCC	1 cut(s)	421
AccI	GTMKAC	1 cut(s)	278
AccII	CGCG	3 cut(s)	130, 321, 341
AciI	CCGC	4 cut(s)	130, 321, 617, 1091
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	2 cut(s)	833, 1278
AcuI	CTGAAG	1 cut(s)	188
AcyI	GRCGYC	1 cut(s)	422
AfaI	GTAC	1 cut(s)	149
AfeI	AGCGCT	1 cut(s)	1119
AgsI	TTSAA	4 cut(s)	181, 545, 721, 730
AhdI	GACNNNNNGTC	1 cut(s)	290
AloI	GAACNNNNNNTCC	2 cut(s)	293, 325
AluBI	AGCT	7 cut(s)	516, 700, 878, 968, 1049, 1073, 1141
AluI	AGCT	7 cut(s)	516, 700, 878, 968, 1049, 1073, 1141
Alw21I	GWGCWC	4 cut(s)	509, 616, 970, 1051
Alw26I	GTCTC	4 cut(s)	154, 257, 392, 597
Ama87I	CYCGRG	2 cut(s)	90, 500
Aor51HI	AGCGCT	1 cut(s)	1119
AoxI	GGCC	5 cut(s)	116, 231, 252, 331, 1256
ApaI	GGGCCC	1 cut(s)	120
ApeKI	GCWGC	3 cut(s)	172, 382, 713
ApoI	RAATTY	2 cut(s)	833, 1278
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
AspLEI	GCGC	5 cut(s)	130, 321, 343, 424, 1120
AspS9I	GGNCC	5 cut(s)	116, 117, 867, 1181, 1256
AsuHPI	GGTGA	2 cut(s)	55, 235
AsuII	TTCGAA	1 cut(s)	155
AvaI	CYCGRG	2 cut(s)	90, 500
AvaII	GGWCC	2 cut(s)	867, 1181
AxyI	CCTNAGG	1 cut(s)	1260
BaeGI	GKGCMC	1 cut(s)	120
BalI	TGGCCA	1 cut(s)	254
BanI	GGYRCC	1 cut(s)	421
BanII	GRGCYC	3 cut(s)	120, 970, 1051
Bbv12I	GWGCWC	4 cut(s)	509, 616, 970, 1051
BbvCI	CCTCAGC	1 cut(s)	1121
BbvI	GCAGC	3 cut(s)	184, 394, 700
BccI	CCATC	2 cut(s)	400, 1028
BceAI	ACGGC	2 cut(s)	433, 659
BcgI	CGANNNNNNTGC	2 cut(s)	145, 179
BciVI	GTATCC	1 cut(s)	499
BclI	TGATCA	1 cut(s)	463
BcoDI	GTCTC	4 cut(s)	154, 257, 392, 597
BfaI	CTAG	1 cut(s)	701
BfoI	RGCGCY	2 cut(s)	425, 1121
BfuI	GTATCC	1 cut(s)	499
BglI	GCCNNNNNGGC	1 cut(s)	251
BisI	GCNGC	4 cut(s)	173, 383, 714, 1092
BlsI	GCNGC	4 cut(s)	174, 384, 715, 1093
Bme18I	GGWCC	2 cut(s)	867, 1181
BmeRI	GACNNNNNGTC	1 cut(s)	290
BmeT110I	CYCGRG	2 cut(s)	90, 500
BmgT120I	GGNCC	5 cut(s)	116, 117, 867, 1181, 1256
BmiI	GGNNCC	3 cut(s)	118, 423, 447
BmsI	GCATC	4 cut(s)	870, 941, 1200, 1311
BoxI	GACNNNNGTC	1 cut(s)	92
BpmI	CTGGAG	3 cut(s)	188, 659, 900
Bpu10I	CCTNAGC	3 cut(s)	219, 360, 1121
Bpu14I	TTCGAA	1 cut(s)	155
BpuEI	CTTGAG	1 cut(s)	1265
BsaHI	GRCGYC	1 cut(s)	422
BsaJI	CCNNGG	2 cut(s)	234, 870
Bse1I	ACTGG	2 cut(s)	642, 1201
Bse21I	CCTNAGG	1 cut(s)	1260
BseDI	CCNNGG	2 cut(s)	234, 870
BseGI	GGATG	1 cut(s)	814
BseMII	CTCAG	4 cut(s)	233, 374, 1112, 1251
BseNI	ACTGG	2 cut(s)	642, 1201
BseSI	GKGCMC	1 cut(s)	120
BseXI	GCAGC	3 cut(s)	184, 394, 700
Bsh1236I	CGCG	3 cut(s)	130, 321, 341
BshFI	GGCC	5 cut(s)	118, 233, 254, 333, 1258
BshNI	GGYRCC	1 cut(s)	421
BsiHKAI	GWGCWC	4 cut(s)	509, 616, 970, 1051
BsiHKCI	CYCGRG	2 cut(s)	90, 500
BsiSI	CCGG	2 cut(s)	192, 299
BslFI	GGGAC	1 cut(s)	569
BsmAI	GTCTC	4 cut(s)	154, 257, 392, 597
BsmBI	CGTCTC	1 cut(s)	392
BsmFI	GGGAC	1 cut(s)	569
BsmI	GAATGC	1 cut(s)	1161
BsnI	GGCC	5 cut(s)	118, 233, 254, 333, 1258
BsoBI	CYCGRG	2 cut(s)	90, 500
Bsp119I	TTCGAA	1 cut(s)	155
Bsp120I	GGGCCC	1 cut(s)	116
Bsp1286I	GDGCHC	5 cut(s)	120, 509, 616, 970, 1051
Bsp143I	GATC	5 cut(s)	77, 108, 138, 207, 463
Bsp19I	CCATGG	1 cut(s)	870
BspACI	CCGC	4 cut(s)	130, 321, 617, 1091
BspANI	GGCC	5 cut(s)	118, 233, 254, 333, 1258
BspCNI	CTCAG	4 cut(s)	232, 373, 1113, 1252
BspFNI	CGCG	3 cut(s)	130, 321, 341
BspHI	TCATGA	2 cut(s)	460, 1305
BspLI	GGNNCC	3 cut(s)	118, 423, 447
BspQI	GCTCTTC	1 cut(s)	1056
BspT104I	TTCGAA	1 cut(s)	155
BspT107I	GGYRCC	1 cut(s)	421
BsrI	ACTGG	2 cut(s)	642, 1201
BssECI	CCNNGG	2 cut(s)	234, 870
BssMI	GATC	5 cut(s)	77, 108, 138, 207, 463
BssNI	GRCGYC	1 cut(s)	422
BssT1I	CCWWGG	1 cut(s)	870
Bst4CI	ACNGT	3 cut(s)	29, 841, 913
Bst6I	CTCTTC	6 cut(s)	152, 320, 540, 636, 975, 1056
BstACI	GRCGYC	1 cut(s)	422
BstBI	TTCGAA	1 cut(s)	155
BstC8I	GCNNGC	3 cut(s)	16, 892, 1215
BstDEI	CTNAG	4 cut(s)	219, 360, 1121, 1260
BstDSI	CCRYGG	2 cut(s)	234, 870
BstF5I	GGATG	1 cut(s)	814
BstFNI	CGCG	3 cut(s)	130, 321, 341
BstH2I	RGCGCY	2 cut(s)	425, 1121
BstHHI	GCGC	5 cut(s)	130, 321, 343, 424, 1120
BstKTI	GATC	5 cut(s)	80, 111, 141, 210, 466
BstMAI	GTCTC	4 cut(s)	154, 257, 392, 597
BstMBI	GATC	5 cut(s)	77, 108, 138, 207, 463
BstMWI	GCNNNNNNNGC	8 cut(s)	172, 181, 251, 304, 365, 454, 513, 680
BstNSI	RCATGY	2 cut(s)	307, 612
BstPAI	GACNNNNGTC	1 cut(s)	92
BstSLI	GKGCMC	1 cut(s)	120
BstUI	CGCG	3 cut(s)	130, 321, 341
BstV1I	GCAGC	3 cut(s)	184, 394, 700
Bsu36I	CCTNAGG	1 cut(s)	1260
BsuI	GTATCC	1 cut(s)	499
BsuRI	GGCC	5 cut(s)	118, 233, 254, 333, 1258
BtgI	CCRYGG	2 cut(s)	234, 870
BtsCI	GGATG	1 cut(s)	814
BtsI	GCAGTG	2 cut(s)	708, 755
BtsIMutI	CAGTG	4 cut(s)	635, 708, 755, 846
Cac8I	GCNNGC	3 cut(s)	16, 892, 1215
CciI	TCATGA	2 cut(s)	460, 1305
CfoI	GCGC	5 cut(s)	130, 321, 343, 424, 1120
Cfr13I	GGNCC	5 cut(s)	116, 117, 867, 1181, 1256
CseI	GACGC	4 cut(s)	374, 813, 867, 1137
Csp6I	GTAC	1 cut(s)	148
CviAII	CATG	7 cut(s)	267, 304, 355, 461, 609, 871, 1306
CviQI	GTAC	1 cut(s)	148
DdeI	CTNAG	4 cut(s)	219, 360, 1121, 1260
DinI	GGCGCC	1 cut(s)	423
DpnI	GATC	5 cut(s)	79, 110, 140, 209, 465
DpnII	GATC	5 cut(s)	77, 108, 138, 207, 463
DrdI	GACNNNNNNGTC	1 cut(s)	823
DriI	GACNNNNNGTC	1 cut(s)	290
DseDI	GACNNNNNNGTC	1 cut(s)	823
EaeI	YGGCCR	1 cut(s)	252
Eam1104I	CTCTTC	6 cut(s)	152, 320, 540, 636, 975, 1056
Eam1105I	GACNNNNNGTC	1 cut(s)	290
EarI	CTCTTC	6 cut(s)	152, 320, 540, 636, 975, 1056
Ecl136II	GAGCTC	2 cut(s)	968, 1049
Eco130I	CCWWGG	1 cut(s)	870
Eco24I	GRGCYC	3 cut(s)	120, 970, 1051
Eco47I	GGWCC	2 cut(s)	867, 1181
Eco47III	AGCGCT	1 cut(s)	1119
Eco53kI	GAGCTC	2 cut(s)	968, 1049
Eco57I	CTGAAG	1 cut(s)	188
Eco81I	CCTNAGG	1 cut(s)	1260
Eco88I	CYCGRG	2 cut(s)	90, 500
EcoICRI	GAGCTC	2 cut(s)	968, 1049
EcoO109I	RGGNCCY	1 cut(s)	116
EcoT14I	CCWWGG	1 cut(s)	870
EcoT22I	ATGCAT	2 cut(s)	934, 1161
EcoT38I	GRGCYC	3 cut(s)	120, 970, 1051
EgeI	GGCGCC	1 cut(s)	423
EheI	GGCGCC	1 cut(s)	423
ErhI	CCWWGG	1 cut(s)	870
Esp3I	CGTCTC	1 cut(s)	392
FaeI	CATG	7 cut(s)	270, 307, 358, 464, 612, 874, 1309
FalI	AAGNNNNNCTT	2 cut(s)	161, 193
FaqI	GGGAC	1 cut(s)	569
FatI	CATG	7 cut(s)	266, 303, 354, 460, 608, 870, 1305
FauI	CCCGC	1 cut(s)	314
FbaI	TGATCA	1 cut(s)	463
FblI	GTMKAC	1 cut(s)	278
Fnu4HI	GCNGC	4 cut(s)	173, 383, 714, 1092
FokI	GGATG	1 cut(s)	821
FriOI	GRGCYC	3 cut(s)	120, 970, 1051
Fsp4HI	GCNGC	4 cut(s)	173, 383, 714, 1092
FspBI	CTAG	1 cut(s)	701
GlaI	GCGC	5 cut(s)	129, 320, 342, 423, 1119
GluI	GCNGC	4 cut(s)	173, 383, 714, 1092
GsuI	CTGGAG	3 cut(s)	188, 659, 900
HaeII	RGCGCY	2 cut(s)	425, 1121
HaeIII	GGCC	5 cut(s)	118, 233, 254, 333, 1258
HapII	CCGG	2 cut(s)	192, 299
HgaI	GACGC	4 cut(s)	374, 813, 867, 1137
HhaI	GCGC	5 cut(s)	130, 321, 343, 424, 1120
Hin1I	GRCGYC	1 cut(s)	422
Hin1II	CATG	7 cut(s)	270, 307, 358, 464, 612, 874, 1309
Hin6I	GCGC	5 cut(s)	128, 319, 341, 422, 1118
HinP1I	GCGC	5 cut(s)	128, 319, 341, 422, 1118
HincII	GTYRAC	2 cut(s)	32, 279
HindII	GTYRAC	2 cut(s)	32, 279
HindIII	AAGCTT	1 cut(s)	514
HinfI	GANTC	7 cut(s)	93, 152, 186, 195, 285, 847, 1133
HpaII	CCGG	2 cut(s)	192, 299
HphI	GGTGA	2 cut(s)	55, 235
Hpy166II	GTNNAC	2 cut(s)	32, 279
Hpy188I	TCNGA	9 cut(s)	82, 98, 113, 143, 493, 523, 597, 937, 1056
Hpy8I	GTNNAC	2 cut(s)	32, 279
Hpy99I	CGWCG	5 cut(s)	280, 293, 341, 436, 1153
HpyAV	CCTTC	2 cut(s)	1123, 1167
HpyCH4III	ACNGT	3 cut(s)	29, 841, 913
HpyCH4IV	ACGT	1 cut(s)	434
HpyCH4V	TGCA	9 cut(s)	890, 932, 953, 991, 998, 1019, 1159, 1217, 1302
HpyF10VI	GCNNNNNNNGC	8 cut(s)	172, 181, 251, 304, 365, 454, 513, 680
HpyF3I	CTNAG	4 cut(s)	219, 360, 1121, 1260
HpySE526I	ACGT	1 cut(s)	434
Hsp92I	GRCGYC	1 cut(s)	422
Hsp92II	CATG	7 cut(s)	270, 307, 358, 464, 612, 874, 1309
HspAI	GCGC	5 cut(s)	128, 319, 341, 422, 1118
KasI	GGCGCC	1 cut(s)	421
Ksp22I	TGATCA	1 cut(s)	463
Kzo9I	GATC	5 cut(s)	77, 108, 138, 207, 463
LguI	GCTCTTC	1 cut(s)	1056
LmnI	GCTCC	6 cut(s)	445, 504, 619, 697, 965, 973
Lsp1109I	GCAGC	3 cut(s)	184, 394, 700
LweI	GCATC	4 cut(s)	870, 941, 1200, 1311
MaeI	CTAG	1 cut(s)	701
MaeII	ACGT	1 cut(s)	434
MaeIII	GTNAC	1 cut(s)	223
MalI	GATC	5 cut(s)	79, 110, 140, 209, 465
MboI	GATC	5 cut(s)	77, 108, 138, 207, 463
MboII	GAAGA	9 cut(s)	145, 148, 169, 337, 557, 623, 989, 992, 1043
MfeI	CAATTG	1 cut(s)	1293
MhlI	GDGCHC	5 cut(s)	120, 509, 616, 970, 1051
MlsI	TGGCCA	1 cut(s)	254
MluCI	AATT	9 cut(s)	248, 346, 550, 654, 833, 1075, 1107, 1278, 1293
MluNI	TGGCCA	1 cut(s)	254
Mly113I	GGCGCC	1 cut(s)	422
MlyI	GAGTC	3 cut(s)	102, 195, 279
MmeI	TCCRAC	3 cut(s)	605, 806, 895
Mox20I	TGGCCA	1 cut(s)	254
Mph1103I	ATGCAT	2 cut(s)	934, 1161
MscI	TGGCCA	1 cut(s)	254
MseI	TTAA	3 cut(s)	776, 830, 1101
MslI	CAYNNNNRTG	1 cut(s)	1164
Msp20I	TGGCCA	1 cut(s)	254
MspA1I	CMGCKG	1 cut(s)	619
MspI	CCGG	2 cut(s)	192, 299
MunI	CAATTG	1 cut(s)	1293
Mva1269I	GAATGC	1 cut(s)	1161
MvnI	CGCG	3 cut(s)	130, 321, 341
MwoI	GCNNNNNNNGC	8 cut(s)	172, 181, 251, 304, 365, 454, 513, 680
NarI	GGCGCC	1 cut(s)	422
NcoI	CCATGG	1 cut(s)	870
NdeII	GATC	5 cut(s)	77, 108, 138, 207, 463
NlaIII	CATG	7 cut(s)	270, 307, 358, 464, 612, 874, 1309
NlaIV	GGNNCC	3 cut(s)	118, 423, 447
NmeAIII	GCCGAG	1 cut(s)	194
NmuCI	GTSAC	1 cut(s)	223
NsiI	ATGCAT	2 cut(s)	934, 1161
NspI	RCATGY	2 cut(s)	307, 612
NspV	TTCGAA	1 cut(s)	155
PagI	TCATGA	2 cut(s)	460, 1305
PciSI	GCTCTTC	1 cut(s)	1056
PcsI	WCGNNNNNNNCGW	3 cut(s)	117, 195, 372
PctI	GAATGC	1 cut(s)	1161
PfeI	GAWTC	4 cut(s)	152, 195, 847, 1133
PflFI	GACNNNGTC	2 cut(s)	374, 560
PkrI	GCNGC	4 cut(s)	174, 384, 715, 1093
PleI	GAGTC	3 cut(s)	101, 194, 279
PluTI	GGCGCC	1 cut(s)	425
PpsI	GAGTC	3 cut(s)	101, 194, 279
PshAI	GACNNNNGTC	1 cut(s)	92
Psp124BI	GAGCTC	2 cut(s)	970, 1051
PspN4I	GGNNCC	3 cut(s)	118, 423, 447
PspOMI	GGGCCC	1 cut(s)	116
PspPI	GGNCC	5 cut(s)	116, 117, 867, 1181, 1256
PsyI	GACNNNGTC	2 cut(s)	374, 560
RsaI	GTAC	1 cut(s)	149
RsaNI	GTAC	1 cut(s)	148
RseI	CAYNNNNRTG	1 cut(s)	1164
SacI	GAGCTC	2 cut(s)	970, 1051
SalI	GTCGAC	1 cut(s)	277
SapI	GCTCTTC	1 cut(s)	1056
SaqAI	TTAA	3 cut(s)	776, 830, 1101
SatI	GCNGC	4 cut(s)	173, 383, 714, 1092
Sau3AI	GATC	5 cut(s)	77, 108, 138, 207, 463
Sau96I	GGNCC	5 cut(s)	116, 117, 867, 1181, 1256
SchI	GAGTC	3 cut(s)	102, 195, 279
SduI	GDGCHC	5 cut(s)	120, 509, 616, 970, 1051
SfaNI	GCATC	4 cut(s)	870, 941, 1200, 1311
SfoI	GGCGCC	1 cut(s)	423
SfuI	TTCGAA	1 cut(s)	155
SinI	GGWCC	2 cut(s)	867, 1181
SmiMI	CAYNNNNRTG	1 cut(s)	1164
SmlI	CTYRAG	1 cut(s)	1244
SmoI	CTYRAG	1 cut(s)	1244
Sse9I	AATT	9 cut(s)	248, 346, 550, 654, 833, 1075, 1107, 1278, 1293
SsiI	CCGC	4 cut(s)	130, 321, 617, 1091
SspDI	GGCGCC	1 cut(s)	421
SspMI	CTAG	1 cut(s)	701
SstI	GAGCTC	2 cut(s)	970, 1051
StyI	CCWWGG	1 cut(s)	870
TaaI	ACNGT	3 cut(s)	29, 841, 913
TaiI	ACGT	1 cut(s)	437
TaqI	TCGA	7 cut(s)	53, 155, 198, 278, 482, 537, 1151
TasI	AATT	9 cut(s)	248, 346, 550, 654, 833, 1075, 1107, 1278, 1293
TauI	GCSGC	1 cut(s)	1094
TfiI	GAWTC	4 cut(s)	152, 195, 847, 1133
Tru1I	TTAA	3 cut(s)	776, 830, 1101
Tru9I	TTAA	3 cut(s)	776, 830, 1101
TscAI	CASTG	4 cut(s)	642, 715, 762, 846
TseFI	GTSAC	1 cut(s)	223
TseI	GCWGC	3 cut(s)	172, 382, 713
Tsp45I	GTSAC	1 cut(s)	223
TspDTI	ATGAA	6 cut(s)	49, 655, 788, 825, 990, 1242
TspGWI	ACGGA	2 cut(s)	242, 251
TspRI	CASTG	4 cut(s)	642, 715, 762, 846
Tth111I	GACNNNGTC	2 cut(s)	374, 560
VpaK11BI	GGWCC	2 cut(s)	867, 1181
XapI	RAATTY	2 cut(s)	833, 1278
XceI	RCATGY	2 cut(s)	307, 612
XmiI	GTMKAC	1 cut(s)	278
XspI	CTAG	1 cut(s)	701
Zsp2I	ATGCAT	2 cut(s)	934, 1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.