Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0013844

Physical Location & Seq

Genomic Coordinates Forward (+)

45037766 .. 45041153

Gene Structure 3388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG276500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGGCGCGGAAGAAGATCAGAGAGTACGATTCGAAGAGACTGCTGAAGCAGCACTTGAAGCGAGTAGCCGGAATCGACCTCCAGATCAACTCGGCTCAGGTGACGGAGGCGACCGACTTCACCGAATTGGCCAACAACGAGACATGGCTTTCGTCGACCAGACTCGTCGTCAAGCCGGACATGCTGTTCGGGAAGCGCGGGAAGAGTGGCCTCGTCGCGCTCAATTTGGACATGGCTCAGGTCGCCGACTTCGTCAAGCAGCGTCTCGGTAAGGAGGTTGAGATGGGAGGGTGTAAGGCGCCTATAACGACGTTTATAGTGGAGCCGTTTATGCCTCATGATCAAGAGTTTTACCTCTCGATTGTATCCGAAAGGCTCGGGAGCACGATAAGCTTTTCGGAGTGTGGAGGTATTGAGATTGAAGAGAATTGGGACAAGGTCAAGACTATTTTTCTTCCAACTGAGAAGTCTATGACGAATGAGGCTTGTGCTCCGCTGATTGCTACTCTTCCACTGGAGGTCAAGGAGAAAATTGGAGATTTCATAAAAGCCGTATTTGCTGTATTTCAGGATTTGGATTTTAGCTTCCTGGAAATGAACCCGTTTACCTTGGTTAATGGTGAACCTTTTCCATTAGATATGAGGGGGGAGCTAGATGACACTGCGGCTTTCAAGAACTTCAACAAATGGGGTAATGTGGAGTTTCCACTGCCTTTTGGCAGAGTTTTAAGTCCAACAGAAACATTTATTCATACTTTGGATGAAAAGACAAGTGCGTCCTTAAAATTCACAGTGCTGAATCCAAAAGGACGCATCTGGACCATGGTAGCTGGAGGTGGTGCAAGCGTTATTTATGCTGATACTGTTGGAGATTTGGGTTATGCATCAGAACTTGGAAACTATGCAGAGTATAGTGGAGCTCCAAATGAAGAAGAGGTGTTGCAATATGCAAGAGTAGTGATTGATTGTGCAACAGCAAATCCAGATGGTCGTAAAAGAGCTCTTCTGATTGGAGGTGGTATAGCTAATTTCACAGATGTTGCTGCTACATTTAATGGAATTATTAGAGCGCTGAGGGAGAAGGTAATGGCACATTTATATATCAAAGATCTATTTTGTTGGTTTCATTTTATTCAGTATATGAGTATATGCCTAGATCTCAGTTTATCTCTATTTCTGACATCAAAGGAATCCAAGCTCAAAGGGTCGAGAATGCATATATATGTAAGAAGGGGTGGTCCAAACTATCAAACTGGTTTGGCAAAGATGCGTACATTAGGAGATGAACTTGGTGTTCCTCTTGAGGTTTATGGGCCTGAGGCAACTATGACAGGAATTTGTAAGGAAGCAATTGATTGCATCATGAGTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003878 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006084 GO:0006085 GO:0006139 GO:0006163 GO:0006164 GO:0006629 GO:0006631 GO:0006633 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009108 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009346 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019752 GO:0032787 GO:0032991 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034641 GO:0034654 GO:0035383 GO:0035384 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046390 GO:0046394 GO:0046483 GO:0046912 GO:0051186 GO:0051188 GO:0055086 GO:0071616 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00020 ko00720 ko01100 ko01110 ko01120 ko01130 map00020 map00720 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

ATP-grasp_2 Citrate_bind

Protein Analysis

457

Amino Acids

50.83

Weight (kDa)

5.44

Isoelectric Point (pI)

37.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synth_N	PF24948	2 - 230	4.8e-74	ATP-citrate synthase ATP-grasp domain
ATP-grasp_2	PF08442	6 - 203	7e-18	ATP-grasp domain
Citrate_bind	PF16114	241 - 362	1.2e-58	ATP citrate lyase citrate-binding
Citrate_bind	PF16114	394 - 452	8.3e-18	ATP citrate lyase citrate-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013844)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09430
fragaria_vesca	FvH4_4g21220
malus_domestica	MD13G1143800.v1.1
prunus_persica	Prupe.1G108300_v2.0.a1 Prupe.6G110400_v2.0.a1
pyrus_communis	pycom13g12470
rosa_chinensis	RchiOBHm_Chr4g0426831
rosa_laevigata	RLG00000007274
rosa_multiflora	Rmu_sc0000953.1_g000013 Rmu_sc0004341.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368800
rosa_rugosa	Rorug04G0215200
rosa_samantha	Rh4AG270200 Rh4BG276500 Rh4CG291300 Rh4DG273800
rosa_wichuraiana	Rw4G023450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	775
AccB1I	GGYRCC	1 cut(s)	298
AccI	GTMKAC	1 cut(s)	155
AccII	CGCG	3 cut(s)	7, 198, 218
AciI	CCGC	4 cut(s)	7, 198, 494, 665
AcoI	YGGCCR	1 cut(s)	129
AcsI	RAATTY	2 cut(s)	785, 1335
AcuI	CTGAAG	1 cut(s)	65
AcyI	GRCGYC	1 cut(s)	299
AfaI	GTAC	2 cut(s)	26, 1273
AfeI	AGCGCT	1 cut(s)	1071
AgsI	TTSAA	4 cut(s)	58, 422, 673, 682
AhdI	GACNNNNNGTC	1 cut(s)	167
AjnI	CCWGG	1 cut(s)	588
AloI	GAACNNNNNNTCC	2 cut(s)	170, 202
AluBI	AGCT	8 cut(s)	393, 585, 652, 830, 920, 1001, 1025, 1198
AluI	AGCT	8 cut(s)	393, 585, 652, 830, 920, 1001, 1025, 1198
Alw21I	GWGCWC	4 cut(s)	386, 493, 922, 1003
Alw26I	GTCTC	3 cut(s)	31, 134, 269
Ama87I	CYCGRG	1 cut(s)	377
Aor51HI	AGCGCT	1 cut(s)	1071
AoxI	GGCC	3 cut(s)	129, 208, 1313
ApeKI	GCWGC	3 cut(s)	49, 259, 1043
ApoI	RAATTY	2 cut(s)	785, 1335
ArsI	GACNNNNNNTTYG	4 cut(s)	133, 165, 170, 202
Asp700I	GAANNNNTTC	1 cut(s)	627
AspLEI	GCGC	5 cut(s)	7, 198, 220, 301, 1072
AspS9I	GGNCC	3 cut(s)	819, 1238, 1313
AsuHPI	GGTGA	3 cut(s)	112, 112, 632
AsuII	TTCGAA	1 cut(s)	32
AvaI	CYCGRG	1 cut(s)	377
AvaII	GGWCC	2 cut(s)	819, 1238
AxyI	CCTNAGG	1 cut(s)	1317
BalI	TGGCCA	1 cut(s)	131
BanI	GGYRCC	1 cut(s)	298
BanII	GRGCYC	2 cut(s)	922, 1003
Bbv12I	GWGCWC	4 cut(s)	386, 493, 922, 1003
BbvCI	CCTCAGC	1 cut(s)	1073
BbvI	GCAGC	3 cut(s)	61, 271, 1030
BccI	CCATC	2 cut(s)	277, 980
BceAI	ACGGC	2 cut(s)	310, 536
BcgI	CGANNNNNNTGC	2 cut(s)	22, 56
BciT130I	CCWGG	1 cut(s)	590
BciVI	GTATCC	1 cut(s)	376
BclI	TGATCA	1 cut(s)	340
BcoDI	GTCTC	3 cut(s)	31, 134, 269
BfaI	CTAG	2 cut(s)	653, 1154
BfoI	RGCGCY	2 cut(s)	302, 1073
BfuI	GTATCC	1 cut(s)	376
BglII	AGATCT	2 cut(s)	1108, 1156
BisI	GCNGC	4 cut(s)	50, 260, 666, 1044
BlsI	GCNGC	4 cut(s)	51, 261, 667, 1045
Bme1390I	CCNGG	1 cut(s)	590
Bme18I	GGWCC	2 cut(s)	819, 1238
BmeRI	GACNNNNNGTC	1 cut(s)	167
BmeT110I	CYCGRG	1 cut(s)	377
BmgT120I	GGNCC	3 cut(s)	819, 1238, 1313
BmiI	GGNNCC	2 cut(s)	300, 324
BmrFI	CCNGG	1 cut(s)	590
BmsI	GCATC	4 cut(s)	822, 893, 1257, 1368
BpmI	CTGGAG	3 cut(s)	65, 536, 852
Bpu10I	CCTNAGC	3 cut(s)	96, 237, 1073
Bpu14I	TTCGAA	1 cut(s)	32
BpuEI	CTTGAG	1 cut(s)	1322
BsaHI	GRCGYC	1 cut(s)	299
BsaJI	CCNNGG	2 cut(s)	609, 822
Bse1I	ACTGG	2 cut(s)	519, 1258
Bse21I	CCTNAGG	1 cut(s)	1317
BseBI	CCWGG	1 cut(s)	590
BseDI	CCNNGG	2 cut(s)	609, 822
BseGI	GGATG	1 cut(s)	766
BseMII	CTCAG	6 cut(s)	110, 251, 453, 1064, 1174, 1308
BseNI	ACTGG	2 cut(s)	519, 1258
BseXI	GCAGC	3 cut(s)	61, 271, 1030
Bsh1236I	CGCG	3 cut(s)	7, 198, 218
Bsh1285I	CGRYCG	1 cut(s)	114
BshFI	GGCC	3 cut(s)	131, 210, 1315
BshNI	GGYRCC	1 cut(s)	298
BsiEI	CGRYCG	1 cut(s)	114
BsiHKAI	GWGCWC	4 cut(s)	386, 493, 922, 1003
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	2 cut(s)	69, 176
BslFI	GGGAC	1 cut(s)	446
BsmAI	GTCTC	3 cut(s)	31, 134, 269
BsmBI	CGTCTC	1 cut(s)	269
BsmFI	GGGAC	1 cut(s)	446
BsmI	GAATGC	1 cut(s)	1218
BsnI	GGCC	3 cut(s)	131, 210, 1315
BsoBI	CYCGRG	1 cut(s)	377
Bsp119I	TTCGAA	1 cut(s)	32
Bsp1286I	GDGCHC	4 cut(s)	386, 493, 922, 1003
Bsp143I	GATC	5 cut(s)	15, 84, 340, 1108, 1156
Bsp19I	CCATGG	1 cut(s)	822
BspACI	CCGC	4 cut(s)	7, 198, 494, 665
BspANI	GGCC	3 cut(s)	131, 210, 1315
BspCNI	CTCAG	6 cut(s)	109, 250, 454, 1065, 1173, 1309
BspFNI	CGCG	3 cut(s)	7, 198, 218
BspHI	TCATGA	2 cut(s)	337, 1362
BspLI	GGNNCC	2 cut(s)	300, 324
BspQI	GCTCTTC	1 cut(s)	1008
BspT104I	TTCGAA	1 cut(s)	32
BspT107I	GGYRCC	1 cut(s)	298
BsrI	ACTGG	2 cut(s)	519, 1258
BssECI	CCNNGG	2 cut(s)	609, 822
BssMI	GATC	5 cut(s)	15, 84, 340, 1108, 1156
BssNI	GRCGYC	1 cut(s)	299
BssT1I	CCWWGG	2 cut(s)	609, 822
Bst2UI	CCWGG	1 cut(s)	590
Bst4CI	ACNGT	2 cut(s)	793, 865
Bst6I	CTCTTC	6 cut(s)	29, 197, 417, 513, 927, 1008
BstACI	GRCGYC	1 cut(s)	299
BstBI	TTCGAA	1 cut(s)	32
BstC8I	GCNNGC	1 cut(s)	844
BstDEI	CTNAG	6 cut(s)	96, 237, 462, 1073, 1160, 1317
BstDSI	CCRYGG	1 cut(s)	822
BstF5I	GGATG	1 cut(s)	766
BstFNI	CGCG	3 cut(s)	7, 198, 218
BstH2I	RGCGCY	2 cut(s)	302, 1073
BstHHI	GCGC	5 cut(s)	7, 198, 220, 301, 1072
BstKTI	GATC	5 cut(s)	18, 87, 343, 1111, 1159
BstMAI	GTCTC	3 cut(s)	31, 134, 269
BstMBI	GATC	5 cut(s)	15, 84, 340, 1108, 1156
BstMCI	CGRYCG	1 cut(s)	114
BstMWI	GCNNNNNNNGC	7 cut(s)	49, 58, 181, 242, 331, 390, 557
BstNI	CCWGG	1 cut(s)	590
BstNSI	RCATGY	1 cut(s)	184
BstSCI	CCNGG	1 cut(s)	588
BstUI	CGCG	3 cut(s)	7, 198, 218
BstV1I	GCAGC	3 cut(s)	61, 271, 1030
BstX2I	RGATCY	2 cut(s)	1108, 1156
BstYI	RGATCY	2 cut(s)	1108, 1156
Bsu36I	CCTNAGG	1 cut(s)	1317
BsuI	GTATCC	1 cut(s)	376
BsuRI	GGCC	3 cut(s)	131, 210, 1315
BtgI	CCRYGG	1 cut(s)	822
BtsCI	GGATG	1 cut(s)	766
BtsI	GCAGTG	2 cut(s)	660, 707
BtsIMutI	CAGTG	4 cut(s)	512, 660, 707, 798
Cac8I	GCNNGC	1 cut(s)	844
CciI	TCATGA	2 cut(s)	337, 1362
CfoI	GCGC	5 cut(s)	7, 198, 220, 301, 1072
Cfr13I	GGNCC	3 cut(s)	819, 1238, 1313
CseI	GACGC	3 cut(s)	251, 765, 819
Csp6I	GTAC	2 cut(s)	25, 1272
CviAII	CATG	6 cut(s)	144, 181, 232, 338, 823, 1363
CviQI	GTAC	2 cut(s)	25, 1272
DdeI	CTNAG	6 cut(s)	96, 237, 462, 1073, 1160, 1317
DinI	GGCGCC	1 cut(s)	300
DpnI	GATC	5 cut(s)	17, 86, 342, 1110, 1158
DpnII	GATC	5 cut(s)	15, 84, 340, 1108, 1156
DrdI	GACNNNNNNGTC	1 cut(s)	775
DriI	GACNNNNNGTC	1 cut(s)	167
DseDI	GACNNNNNNGTC	1 cut(s)	775
EaeI	YGGCCR	1 cut(s)	129
Eam1104I	CTCTTC	6 cut(s)	29, 197, 417, 513, 927, 1008
Eam1105I	GACNNNNNGTC	1 cut(s)	167
EarI	CTCTTC	6 cut(s)	29, 197, 417, 513, 927, 1008
Ecl136II	GAGCTC	2 cut(s)	920, 1001
Eco130I	CCWWGG	2 cut(s)	609, 822
Eco24I	GRGCYC	2 cut(s)	922, 1003
Eco47I	GGWCC	2 cut(s)	819, 1238
Eco47III	AGCGCT	1 cut(s)	1071
Eco53kI	GAGCTC	2 cut(s)	920, 1001
Eco57I	CTGAAG	1 cut(s)	65
Eco81I	CCTNAGG	1 cut(s)	1317
Eco88I	CYCGRG	1 cut(s)	377
EcoICRI	GAGCTC	2 cut(s)	920, 1001
EcoRII	CCWGG	1 cut(s)	588
EcoT14I	CCWWGG	2 cut(s)	609, 822
EcoT22I	ATGCAT	2 cut(s)	886, 1218
EcoT38I	GRGCYC	2 cut(s)	922, 1003
EgeI	GGCGCC	1 cut(s)	300
EheI	GGCGCC	1 cut(s)	300
ErhI	CCWWGG	2 cut(s)	609, 822
Esp3I	CGTCTC	1 cut(s)	269
FaeI	CATG	6 cut(s)	147, 184, 235, 341, 826, 1366
FalI	AAGNNNNNCTT	2 cut(s)	38, 70
FaqI	GGGAC	1 cut(s)	446
FatI	CATG	6 cut(s)	143, 180, 231, 337, 822, 1362
FauI	CCCGC	1 cut(s)	191
FbaI	TGATCA	1 cut(s)	340
FblI	GTMKAC	1 cut(s)	155
Fnu4HI	GCNGC	4 cut(s)	50, 260, 666, 1044
FokI	GGATG	1 cut(s)	773
FriOI	GRGCYC	2 cut(s)	922, 1003
Fsp4HI	GCNGC	4 cut(s)	50, 260, 666, 1044
FspBI	CTAG	2 cut(s)	653, 1154
GlaI	GCGC	5 cut(s)	6, 197, 219, 300, 1071
GluI	GCNGC	4 cut(s)	50, 260, 666, 1044
GsuI	CTGGAG	3 cut(s)	65, 536, 852
HaeII	RGCGCY	2 cut(s)	302, 1073
HaeIII	GGCC	3 cut(s)	131, 210, 1315
HapII	CCGG	2 cut(s)	69, 176
HgaI	GACGC	3 cut(s)	251, 765, 819
HhaI	GCGC	5 cut(s)	7, 198, 220, 301, 1072
Hin1I	GRCGYC	1 cut(s)	299
Hin1II	CATG	6 cut(s)	147, 184, 235, 341, 826, 1366
Hin6I	GCGC	5 cut(s)	5, 196, 218, 299, 1070
HinP1I	GCGC	5 cut(s)	5, 196, 218, 299, 1070
HincII	GTYRAC	1 cut(s)	156
HindII	GTYRAC	1 cut(s)	156
HindIII	AAGCTT	1 cut(s)	391
HinfI	GANTC	5 cut(s)	29, 72, 162, 799, 1190
HpaII	CCGG	2 cut(s)	69, 176
HphI	GGTGA	3 cut(s)	112, 112, 632
Hpy166II	GTNNAC	3 cut(s)	156, 606, 623
Hpy188I	TCNGA	6 cut(s)	20, 370, 400, 889, 1008, 1179
Hpy8I	GTNNAC	3 cut(s)	156, 606, 623
Hpy99I	CGWCG	4 cut(s)	157, 170, 218, 313
HpyAV	CCTTC	2 cut(s)	1075, 1224
HpyCH4III	ACNGT	2 cut(s)	793, 865
HpyCH4IV	ACGT	1 cut(s)	311
HpyCH4V	TGCA	8 cut(s)	842, 884, 905, 943, 950, 971, 1216, 1359
HpyF10VI	GCNNNNNNNGC	7 cut(s)	49, 58, 181, 242, 331, 390, 557
HpyF3I	CTNAG	6 cut(s)	96, 237, 462, 1073, 1160, 1317
HpySE526I	ACGT	1 cut(s)	311
Hsp92I	GRCGYC	1 cut(s)	299
Hsp92II	CATG	6 cut(s)	147, 184, 235, 341, 826, 1366
HspAI	GCGC	5 cut(s)	5, 196, 218, 299, 1070
KasI	GGCGCC	1 cut(s)	298
Ksp22I	TGATCA	1 cut(s)	340
Kzo9I	GATC	5 cut(s)	15, 84, 340, 1108, 1156
LguI	GCTCTTC	1 cut(s)	1008
LmnI	GCTCC	6 cut(s)	322, 381, 496, 649, 917, 925
Lsp1109I	GCAGC	3 cut(s)	61, 271, 1030
LweI	GCATC	4 cut(s)	822, 893, 1257, 1368
MaeI	CTAG	2 cut(s)	653, 1154
MaeII	ACGT	1 cut(s)	311
MaeIII	GTNAC	1 cut(s)	100
MalI	GATC	5 cut(s)	17, 86, 342, 1110, 1158
MboI	GATC	5 cut(s)	15, 84, 340, 1108, 1156
MfeI	CAATTG	1 cut(s)	1350
MflI	RGATCY	2 cut(s)	1108, 1156
MhlI	GDGCHC	4 cut(s)	386, 493, 922, 1003
MlsI	TGGCCA	1 cut(s)	131
MluCI	AATT	9 cut(s)	125, 223, 427, 531, 785, 1027, 1059, 1335, 1350
MluNI	TGGCCA	1 cut(s)	131
Mly113I	GGCGCC	1 cut(s)	299
MlyI	GAGTC	1 cut(s)	156
MmeI	TCCRAC	3 cut(s)	482, 758, 847
Mox20I	TGGCCA	1 cut(s)	131
Mph1103I	ATGCAT	2 cut(s)	886, 1218
MroXI	GAANNNNTTC	1 cut(s)	627
MscI	TGGCCA	1 cut(s)	131
MseI	TTAA	4 cut(s)	615, 728, 782, 1053
MslI	CAYNNNNRTG	1 cut(s)	1221
Msp20I	TGGCCA	1 cut(s)	131
MspA1I	CMGCKG	1 cut(s)	496
MspI	CCGG	2 cut(s)	69, 176
MspR9I	CCNGG	1 cut(s)	590
MunI	CAATTG	1 cut(s)	1350
Mva1269I	GAATGC	1 cut(s)	1218
MvaI	CCWGG	1 cut(s)	590
MvnI	CGCG	3 cut(s)	7, 198, 218
MwoI	GCNNNNNNNGC	7 cut(s)	49, 58, 181, 242, 331, 390, 557
NarI	GGCGCC	1 cut(s)	299
NcoI	CCATGG	1 cut(s)	822
NdeII	GATC	5 cut(s)	15, 84, 340, 1108, 1156
NlaIII	CATG	6 cut(s)	147, 184, 235, 341, 826, 1366
NlaIV	GGNNCC	2 cut(s)	300, 324
NmeAIII	GCCGAG	1 cut(s)	71
NmuCI	GTSAC	1 cut(s)	100
NsiI	ATGCAT	2 cut(s)	886, 1218
NspI	RCATGY	1 cut(s)	184
NspV	TTCGAA	1 cut(s)	32
PagI	TCATGA	2 cut(s)	337, 1362
PciSI	GCTCTTC	1 cut(s)	1008
PcsI	WCGNNNNNNNCGW	1 cut(s)	249
PctI	GAATGC	1 cut(s)	1218
PdmI	GAANNNNTTC	1 cut(s)	627
PfeI	GAWTC	4 cut(s)	29, 72, 799, 1190
PflFI	GACNNNGTC	2 cut(s)	251, 437
PfoI	TCCNGGA	1 cut(s)	588
PkrI	GCNGC	4 cut(s)	51, 261, 667, 1045
PleI	GAGTC	1 cut(s)	156
PluTI	GGCGCC	1 cut(s)	302
PpsI	GAGTC	1 cut(s)	156
Psp124BI	GAGCTC	2 cut(s)	922, 1003
Psp6I	CCWGG	1 cut(s)	588
PspGI	CCWGG	1 cut(s)	588
PspN4I	GGNNCC	2 cut(s)	300, 324
PspPI	GGNCC	3 cut(s)	819, 1238, 1313
PsuI	RGATCY	2 cut(s)	1108, 1156
PsyI	GACNNNGTC	2 cut(s)	251, 437
RsaI	GTAC	2 cut(s)	26, 1273
RsaNI	GTAC	2 cut(s)	25, 1272
RseI	CAYNNNNRTG	1 cut(s)	1221
SacI	GAGCTC	2 cut(s)	922, 1003
SalI	GTCGAC	1 cut(s)	154
SapI	GCTCTTC	1 cut(s)	1008
SaqAI	TTAA	4 cut(s)	615, 728, 782, 1053
SatI	GCNGC	4 cut(s)	50, 260, 666, 1044
Sau3AI	GATC	5 cut(s)	15, 84, 340, 1108, 1156
Sau96I	GGNCC	3 cut(s)	819, 1238, 1313
SchI	GAGTC	1 cut(s)	156
ScrFI	CCNGG	1 cut(s)	590
SduI	GDGCHC	4 cut(s)	386, 493, 922, 1003
SfaNI	GCATC	4 cut(s)	822, 893, 1257, 1368
SfoI	GGCGCC	1 cut(s)	300
SfuI	TTCGAA	1 cut(s)	32
SinI	GGWCC	2 cut(s)	819, 1238
SmiMI	CAYNNNNRTG	1 cut(s)	1221
SmlI	CTYRAG	1 cut(s)	1301
SmoI	CTYRAG	1 cut(s)	1301
Sse9I	AATT	9 cut(s)	125, 223, 427, 531, 785, 1027, 1059, 1335, 1350
SsiI	CCGC	4 cut(s)	7, 198, 494, 665
SspDI	GGCGCC	1 cut(s)	298
SspMI	CTAG	2 cut(s)	653, 1154
SstI	GAGCTC	2 cut(s)	922, 1003
StyD4I	CCNGG	1 cut(s)	588
StyI	CCWWGG	2 cut(s)	609, 822
TaaI	ACNGT	2 cut(s)	793, 865
TaiI	ACGT	1 cut(s)	314
TaqI	TCGA	5 cut(s)	32, 75, 155, 359, 1208
TaqII	GACCGA	1 cut(s)	128
TasI	AATT	9 cut(s)	125, 223, 427, 531, 785, 1027, 1059, 1335, 1350
TauI	GCSGC	1 cut(s)	668
TfiI	GAWTC	4 cut(s)	29, 72, 799, 1190
Tru1I	TTAA	4 cut(s)	615, 728, 782, 1053
Tru9I	TTAA	4 cut(s)	615, 728, 782, 1053
TscAI	CASTG	4 cut(s)	519, 667, 714, 798
TseFI	GTSAC	1 cut(s)	100
TseI	GCWGC	3 cut(s)	49, 259, 1043
Tsp45I	GTSAC	1 cut(s)	100
TspDTI	ATGAA	7 cut(s)	532, 611, 740, 777, 942, 1115, 1299
TspGWI	ACGGA	1 cut(s)	119
TspRI	CASTG	4 cut(s)	519, 667, 714, 798
Tth111I	GACNNNGTC	2 cut(s)	251, 437
VpaK11BI	GGWCC	2 cut(s)	819, 1238
XapI	RAATTY	2 cut(s)	785, 1335
XceI	RCATGY	1 cut(s)	184
XmiI	GTMKAC	1 cut(s)	155
XmnI	GAANNNNTTC	1 cut(s)	627
XspI	CTAG	2 cut(s)	653, 1154
Zsp2I	ATGCAT	2 cut(s)	886, 1218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.