Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0014248

Physical Location & Seq

Genomic Coordinates Forward (+)

57573220 .. 57576965

Gene Structure 3746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40194

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGTCCAAACCCTGGGGTGTTATCGGCGCCTGGGCCGCCGAGGCCGAGCGAGCCGAGGCTGAGGAGCTCGCCGCCGCCCAAGCCGCCGAGTCCCAGAGCTTCCCCAGCCTCAAGGAAGCCGTCACCACCAAGCCCAAGAGCAAGAAGATGACCCTCTCCGAATTCACCATGGGCAGCAGTTTCTCCTCCGCCGACTCCACCCGCCTCACTCCCGACGAGATGCTCCGCCTCCCCACCGGCCCAAAAGAGCGCTCCGCCGAGGAAATGCAGTACGGCGGCCGCCTCGGCGGCGGGTTCTCCTCCTACGGCCGGCCCGGGCCCAATCCGGGTCGGGGCAGGGACCGCGAGGACTCAGATGGGTCGTGGGGAGGAGGTGGCAGAAGATCCTACGGTGGATTTGAAGACGACCGGAGGGGTCCGCCTTCTAGGGTTTCAGATTTGGATTTGCCGTCTAGGGCTGACGAGGTCGACAATTGGGCTTCGACGAAGAAGCCTATACAGTCATTCGATTCCGGTCGACAAAACCGGTATGCCTCGCTCGGCGGAGGCGGTGGTGGTGGTGGTGGAGGTGTTGGTGGTGGTGCTATTGGTGGAGCTTTTTCTAGGGCTGACGAGGTTGATAACTGGGCTACTGGGAAAAGGCCTGTGCAGCCCGGCCCTCCAGCTAGATCATCCACATTTGGGTCCGGGTTTCGTGATTCGGGTCCCGAGCCTGATCGCTGGGCTAGAGGAGGAGGAGGTGGTGGTGGTGATGGGGTTGAGAGAGAGCGGCCTAGATTGGTTTTGGATCCCCGGAGAGACGTAGGGTTGAATGAGCCACCTGCGGTGGTGAAGACCAATAAGCCAAGCCCGTTTGGGGCAGCAAGGCCTAGAGAGGAGAATTTGGCCGATAAGGGCTTGGATTATAAGAAACTGGACTCCGAAATTGAGGCCAAGAAGACGAGTAGGCCTTCCAGTGCACATTCAAGCCGGCCTTCCAGTGCGCAATCGAGCAGGTCTGAGGGTCCTGCGCTGCATGGGATTGAGAATGTGGTAAAGCCGAGGCCAAAAGTAAACCCTTTTGGGGATGCCAAGCCGAGGGAAGTGTTACTGGAGGAGCGAGGTAAGGATTGGAGGAAGATTGATCAACAGTTGGAGCATCGCTCTGTTGACAGACCCGAAACTGAGGAAGAAAAAAGATTAAAGGAAGAAATAGATGGCTTAAGGAAGGAACTTGAATCTAAAAATAACATGCACAGTGAAACTGTGCAAGACTCTAGTGGATCCCAGCCAAGTCTACATGATATTGTACTTCAAAAGGAAAGGGAATTGGAGTTGCTGATCCGCGATTTGGATGACAAAGTTCGCTTTGGGCAGAAAGCCATTGACAGGCCTGGGTCCGGAGCAGGCAGGCCTGGGTCCGGGGCAGGCAGGGCTGGCAGCTTTCTTGAAAGAACACCGTCTCATTCTGGGTCATTTGAAGATTCCAGAAATATGGAATATATGGATAGACCTCGATCGCATGGCAAAGGAGATGCGTGGGGAAGACCTTCTGATGACAGAAGGGGATTCCAAGGTAACAGGGAAAGGGGATTTCAAGGTAACCGAGAAGGAGGATTCCAAGGTAGCAGAGAAGGAGGATTTCTAGGGAACAGAGTCTTCCACAGGTCAAGTTCAAGAGAGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009505 GO:0009506 GO:0009987 GO:0010467 GO:0019538 GO:0030054 GO:0030312 GO:0034641 GO:0034645 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044464 GO:0046983 GO:0055044 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

eIF-4B

Protein Analysis

556

Amino Acids

60.29

Weight (kDa)

9.09

Isoelectric Point (pI)

58.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF-4B	PF06273	1 - 524	9.5e-229	Plant specific eukaryotic initiation factor 4B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13020
fragaria_vesca	FvH4_4g26000
malus_domestica	MD13G1098600.v1.1 MD16G1099600.v1.1
prunus_persica	Prupe.1G246800_v2.0.a1 Prupe.1G246800_v2.0.a1
pyrus_communis	pycom13g08630 pycom16g08470
rosa_chinensis	RchiOBHm_Chr4g0433421
rosa_laevigata	RLG00000006754
rosa_roxburghii	Rroxscaffold_5G00374970
rosa_rugosa	Rorug04G0268700
rosa_samantha	Rh4AG323400 Rh4BG331300 Rh4CG346600 Rh4DG327600
rosa_wichuraiana	Rw4G028020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	906
AarI	CACCTGC	1 cut(s)	829
Acc16I	TGCGCA	1 cut(s)	984
Acc36I	ACCTGC	2 cut(s)	829, 984
AccB1I	GGYRCC	1 cut(s)	26
AccB7I	CCANNNNNTGG	1 cut(s)	12
AccBSI	CCGCTC	1 cut(s)	769
AccI	GTMKAC	3 cut(s)	468, 517, 1276
AccII	CGCG	2 cut(s)	345, 1326
AccIII	TCCGGA	1 cut(s)	1379
AclWI	GGATC	6 cut(s)	378, 782, 795, 1257, 1270, 1315
AcoI	YGGCCR	3 cut(s)	277, 307, 885
AcsI	RAATTY	2 cut(s)	161, 880
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	2 cut(s)	272, 1290
AfeI	AGCGCT	1 cut(s)	251
AflII	CTTAAG	1 cut(s)	1201
AgeI	ACCGGT	1 cut(s)	525
AgsI	TTSAA	9 cut(s)	401, 811, 966, 1217, 1295, 1430, 1460, 1577, 1656
AjnI	CCWGG	4 cut(s)	11, 29, 1372, 1393
AluBI	AGCT	5 cut(s)	67, 99, 596, 665, 1422
AluI	AGCT	5 cut(s)	67, 99, 596, 665, 1422
Alw21I	GWGCWC	2 cut(s)	69, 961
Alw26I	GTCTC	2 cut(s)	792, 1446
Alw44I	GTGCAC	1 cut(s)	957
AlwI	GGATC	6 cut(s)	378, 782, 795, 1257, 1270, 1315
Ama87I	CYCGRG	2 cut(s)	314, 707
Aor13HI	TCCGGA	1 cut(s)	1379
Aor51HI	AGCGCT	1 cut(s)	251
ApaI	GGGCCC	1 cut(s)	321
ApaLI	GTGCAC	1 cut(s)	957
ApeKI	GCWGC	5 cut(s)	174, 649, 860, 1012, 1419
ApoI	RAATTY	2 cut(s)	161, 880
AsiGI	ACCGGT	1 cut(s)	525
Asp700I	GAANNNNTTC	1 cut(s)	1528
AspLEI	GCGC	4 cut(s)	29, 252, 985, 1012
AsuC2I	CCSGG	7 cut(s)	315, 316, 327, 654, 688, 793, 1402
AsuHPI	GGTGA	4 cut(s)	115, 157, 761, 841
AvaI	CYCGRG	2 cut(s)	314, 707
AvaII	GGWCC	7 cut(s)	340, 416, 684, 704, 1004, 1377, 1398
BaeGI	GKGCMC	2 cut(s)	321, 961
BamHI	GGATCC	2 cut(s)	787, 1262
BanI	GGYRCC	1 cut(s)	26
BanII	GRGCYC	2 cut(s)	69, 321
BbsI	GAAGAC	5 cut(s)	408, 839, 944, 1531, 1630
Bbv12I	GWGCWC	2 cut(s)	69, 961
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	5 cut(s)	186, 661, 872, 999, 1431
BccI	CCATC	4 cut(s)	350, 746, 1190, 1659
BceAI	ACGGC	4 cut(s)	104, 289, 322, 433
BciT130I	CCWGG	4 cut(s)	13, 31, 1374, 1395
BclI	TGATCA	1 cut(s)	1123
BcnI	CCSGG	7 cut(s)	315, 316, 327, 654, 688, 793, 1402
BcoDI	GTCTC	2 cut(s)	792, 1446
BfaI	CTAG	9 cut(s)	426, 453, 603, 666, 726, 774, 870, 1257, 1625
BfoI	RGCGCY	2 cut(s)	30, 253
BfrI	CTTAAG	1 cut(s)	1201
BfuAI	ACCTGC	2 cut(s)	829, 984
BglI	GCCNNNNNGGC	3 cut(s)	41, 285, 288
Bme18I	GGWCC	7 cut(s)	340, 416, 684, 704, 1004, 1377, 1398
BmeT110I	CYCGRG	2 cut(s)	314, 707
BmrI	ACTGGG	2 cut(s)	634, 642
BmsI	GCATC	4 cut(s)	210, 1057, 1147, 1504
BmuI	ACTGGG	2 cut(s)	634, 642
BpiI	GAAGAC	5 cut(s)	408, 839, 944, 1531, 1630
BplI	GAGNNNNNCTC	2 cut(s)	1127, 1159
BpmI	CTGGAG	2 cut(s)	645, 1112
Bpu10I	CCTNAGC	1 cut(s)	60
BpuEI	CTTGAG	1 cut(s)	95
BpuMI	CCSGG	7 cut(s)	315, 316, 327, 654, 688, 793, 1402
BsaHI	GRCGYC	1 cut(s)	27
BsaWI	WCCGGW	4 cut(s)	408, 512, 525, 1379
Bse118I	RCCGGY	4 cut(s)	236, 309, 525, 969
Bse1I	ACTGG	6 cut(s)	629, 637, 918, 954, 978, 1095
BseAI	TCCGGA	1 cut(s)	1379
BseBI	CCWGG	4 cut(s)	13, 31, 1374, 1395
BseGI	GGATG	3 cut(s)	671, 1072, 1339
BseMII	CTCAG	4 cut(s)	51, 366, 990, 1155
BseNI	ACTGG	6 cut(s)	629, 637, 918, 954, 978, 1095
BseRI	GAGGAG	9 cut(s)	77, 175, 289, 384, 744, 747, 750, 890, 1109
BseSI	GKGCMC	2 cut(s)	321, 961
BseX3I	CGGCCG	2 cut(s)	277, 307
BseXI	GCAGC	5 cut(s)	186, 661, 872, 999, 1431
BseYI	CCCAGC	3 cut(s)	104, 720, 1266
BsgI	GTGCAG	1 cut(s)	668
Bsh1236I	CGCG	2 cut(s)	345, 1326
Bsh1285I	CGRYCG	5 cut(s)	280, 310, 409, 517, 1499
BshNI	GGYRCC	1 cut(s)	26
BshTI	ACCGGT	1 cut(s)	525
BsiEI	CGRYCG	5 cut(s)	280, 310, 409, 517, 1499
BsiHKAI	GWGCWC	2 cut(s)	69, 961
BsiHKCI	CYCGRG	2 cut(s)	314, 707
BslFI	GGGAC	3 cut(s)	76, 353, 690
BsmAI	GTCTC	2 cut(s)	792, 1446
BsmBI	CGTCTC	2 cut(s)	792, 1446
BsmFI	GGGAC	3 cut(s)	76, 353, 690
BsoBI	CYCGRG	2 cut(s)	314, 707
Bsp120I	GGGCCC	1 cut(s)	317
Bsp1286I	GDGCHC	3 cut(s)	69, 321, 961
Bsp13I	TCCGGA	1 cut(s)	1379
Bsp143I	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
Bsp19I	CCATGG	1 cut(s)	168
BspCNI	CTCAG	4 cut(s)	52, 365, 991, 1156
BspEI	TCCGGA	1 cut(s)	1379
BspFNI	CGCG	2 cut(s)	345, 1326
BspMI	ACCTGC	2 cut(s)	829, 984
BspPI	GGATC	6 cut(s)	378, 782, 795, 1257, 1270, 1315
BspT107I	GGYRCC	1 cut(s)	26
BspTI	CTTAAG	1 cut(s)	1201
BsrBI	CCGCTC	1 cut(s)	769
BsrFI	RCCGGY	4 cut(s)	236, 309, 525, 969
BsrI	ACTGG	6 cut(s)	629, 637, 918, 954, 978, 1095
BssAI	RCCGGY	4 cut(s)	236, 309, 525, 969
BssMI	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	3 cut(s)	168, 1552, 1600
Bst2UI	CCWGG	4 cut(s)	13, 31, 1374, 1395
Bst4CI	ACNGT	6 cut(s)	392, 501, 1131, 1238, 1246, 1440
BstACI	GRCGYC	1 cut(s)	27
BstAFI	CTTAAG	1 cut(s)	1201
BstC8I	GCNNGC	8 cut(s)	51, 69, 311, 971, 1387, 1391, 1408, 1417
BstDEI	CTNAG	4 cut(s)	60, 352, 999, 1164
BstDSI	CCRYGG	1 cut(s)	168
BstEII	GGTNACC	1 cut(s)	1580
BstF5I	GGATG	3 cut(s)	671, 1072, 1339
BstFNI	CGCG	2 cut(s)	345, 1326
BstH2I	RGCGCY	2 cut(s)	30, 253
BstHHI	GCGC	4 cut(s)	29, 252, 985, 1012
BstKTI	GATC	8 cut(s)	386, 671, 718, 790, 1126, 1265, 1323, 1499
BstMAI	GTCTC	2 cut(s)	792, 1446
BstMBI	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
BstMCI	CGRYCG	5 cut(s)	280, 310, 409, 517, 1499
BstNI	CCWGG	4 cut(s)	13, 31, 1374, 1395
BstNSI	RCATGY	1 cut(s)	1234
BstPI	GGTNACC	1 cut(s)	1580
BstSLI	GKGCMC	2 cut(s)	321, 961
BstUI	CGCG	2 cut(s)	345, 1326
BstV1I	GCAGC	5 cut(s)	186, 661, 872, 999, 1431
BstV2I	GAAGAC	5 cut(s)	408, 839, 944, 1531, 1630
BstX2I	RGATCY	3 cut(s)	383, 787, 1262
BstXI	CCANNNNNNTGG	1 cut(s)	1474
BstYI	RGATCY	3 cut(s)	383, 787, 1262
BstZI	CGGCCG	2 cut(s)	277, 307
BtgI	CCRYGG	1 cut(s)	168
BtgZI	GCGATG	1 cut(s)	1124
BtsCI	GGATG	3 cut(s)	671, 1072, 1339
BtsIMutI	CAGTG	3 cut(s)	961, 985, 1243
BveI	ACCTGC	2 cut(s)	829, 984
Cac8I	GCNNGC	8 cut(s)	51, 69, 311, 971, 1387, 1391, 1408, 1417
CciNI	GCGGCCGC	1 cut(s)	277
CfoI	GCGC	4 cut(s)	29, 252, 985, 1012
Cfr10I	RCCGGY	4 cut(s)	236, 309, 525, 969
Cfr9I	CCCGGG	1 cut(s)	314
Csp6I	GTAC	2 cut(s)	271, 1289
CspAI	ACCGGT	1 cut(s)	525
CviAII	CATG	5 cut(s)	169, 1016, 1231, 1280, 1502
CviQI	GTAC	2 cut(s)	271, 1289
DdeI	CTNAG	4 cut(s)	60, 352, 999, 1164
DinI	GGCGCC	1 cut(s)	28
DpnI	GATC	8 cut(s)	385, 670, 717, 789, 1125, 1264, 1322, 1498
DpnII	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
EaeI	YGGCCR	3 cut(s)	277, 307, 885
EagI	CGGCCG	2 cut(s)	277, 307
EciI	GGCGGA	5 cut(s)	178, 215, 244, 408, 558
Ecl136II	GAGCTC	1 cut(s)	67
EclXI	CGGCCG	2 cut(s)	277, 307
Eco130I	CCWWGG	3 cut(s)	168, 1552, 1600
Eco147I	AGGCCT	5 cut(s)	643, 868, 949, 1372, 1393
Eco24I	GRGCYC	2 cut(s)	69, 321
Eco47I	GGWCC	7 cut(s)	340, 416, 684, 704, 1004, 1377, 1398
Eco47III	AGCGCT	1 cut(s)	251
Eco52I	CGGCCG	2 cut(s)	277, 307
Eco53kI	GAGCTC	1 cut(s)	67
Eco88I	CYCGRG	2 cut(s)	314, 707
Eco91I	GGTNACC	1 cut(s)	1580
EcoICRI	GAGCTC	1 cut(s)	67
EcoO109I	RGGNCCY	2 cut(s)	704, 1004
EcoO65I	GGTNACC	1 cut(s)	1580
EcoRI	GAATTC	1 cut(s)	161
EcoRII	CCWGG	4 cut(s)	11, 29, 1372, 1393
EcoT14I	CCWWGG	3 cut(s)	168, 1552, 1600
EcoT38I	GRGCYC	2 cut(s)	69, 321
EgeI	GGCGCC	1 cut(s)	28
EheI	GGCGCC	1 cut(s)	28
ErhI	CCWWGG	3 cut(s)	168, 1552, 1600
Esp3I	CGTCTC	2 cut(s)	792, 1446
FaeI	CATG	5 cut(s)	172, 1019, 1234, 1283, 1505
FalI	AAGNNNNNCTT	2 cut(s)	958, 990
FaqI	GGGAC	3 cut(s)	76, 353, 690
FatI	CATG	5 cut(s)	168, 1015, 1230, 1279, 1501
FauI	CCCGC	2 cut(s)	209, 284
FbaI	TGATCA	1 cut(s)	1123
FblI	GTMKAC	3 cut(s)	468, 517, 1276
FokI	GGATG	3 cut(s)	658, 1079, 1346
FriOI	GRGCYC	2 cut(s)	69, 321
FseI	GGCCGGCC	1 cut(s)	313
FspBI	CTAG	9 cut(s)	426, 453, 603, 666, 726, 774, 870, 1257, 1625
FspI	TGCGCA	1 cut(s)	984
GlaI	GCGC	4 cut(s)	28, 251, 984, 1011
GsaI	CCCAGC	3 cut(s)	108, 724, 1270
GsuI	CTGGAG	2 cut(s)	645, 1112
HaeII	RGCGCY	2 cut(s)	30, 253
HhaI	GCGC	4 cut(s)	29, 252, 985, 1012
Hin1I	GRCGYC	1 cut(s)	27
Hin1II	CATG	5 cut(s)	172, 1019, 1234, 1283, 1505
Hin6I	GCGC	4 cut(s)	27, 250, 983, 1010
HinP1I	GCGC	4 cut(s)	27, 250, 983, 1010
HincII	GTYRAC	3 cut(s)	469, 518, 1150
HindII	GTYRAC	3 cut(s)	469, 518, 1150
HphI	GGTGA	4 cut(s)	115, 157, 761, 841
Hpy166II	GTNNAC	6 cut(s)	469, 518, 959, 1054, 1150, 1277
Hpy188I	TCNGA	6 cut(s)	160, 355, 436, 922, 1000, 1534
Hpy188III	TCNNGA	7 cut(s)	212, 695, 707, 1380, 1427, 1467, 1656
Hpy8I	GTNNAC	6 cut(s)	469, 518, 959, 1054, 1150, 1277
Hpy99I	CGWCG	2 cut(s)	218, 487
HpyAV	CCTTC	8 cut(s)	432, 960, 984, 1201, 1536, 1539, 1583, 1607
HpyCH4III	ACNGT	6 cut(s)	392, 501, 1131, 1238, 1246, 1440
HpyCH4IV	ACGT	1 cut(s)	801
HpyCH4V	TGCA	6 cut(s)	268, 649, 959, 1015, 1234, 1249
HpyF3I	CTNAG	4 cut(s)	60, 352, 999, 1164
HpySE526I	ACGT	1 cut(s)	801
Hsp92I	GRCGYC	1 cut(s)	27
Hsp92II	CATG	5 cut(s)	172, 1019, 1234, 1283, 1505
HspAI	GCGC	4 cut(s)	27, 250, 983, 1010
KasI	GGCGCC	1 cut(s)	26
KflI	GGGWCCC	1 cut(s)	704
Kpn2I	TCCGGA	1 cut(s)	1379
KroI	GCCGGC	2 cut(s)	309, 969
KroNI	GCCGGC	2 cut(s)	311, 971
Ksp22I	TGATCA	1 cut(s)	1123
Kzo9I	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
LmnI	GCTCC	7 cut(s)	64, 228, 257, 593, 1096, 1135, 1382
Lsp1109I	GCAGC	5 cut(s)	186, 661, 872, 999, 1431
LweI	GCATC	4 cut(s)	210, 1057, 1147, 1504
MaeI	CTAG	9 cut(s)	426, 453, 603, 666, 726, 774, 870, 1257, 1625
MaeII	ACGT	1 cut(s)	801
MaeIII	GTNAC	4 cut(s)	121, 1086, 1556, 1580
MalI	GATC	8 cut(s)	385, 670, 717, 789, 1125, 1264, 1322, 1498
MbiI	CCGCTC	1 cut(s)	769
MboI	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
MfeI	CAATTG	1 cut(s)	472
MflI	RGATCY	3 cut(s)	383, 787, 1262
MhlI	GDGCHC	3 cut(s)	69, 321, 961
MluCI	AATT	5 cut(s)	161, 472, 880, 924, 1307
Mly113I	GGCGCC	1 cut(s)	27
MlyI	GAGTC	6 cut(s)	98, 188, 344, 911, 1247, 1644
MmeI	TCCRAC	1 cut(s)	1113
MroI	TCCGGA	1 cut(s)	1379
MroNI	GCCGGC	2 cut(s)	309, 969
MroXI	GAANNNNTTC	1 cut(s)	1528
MseI	TTAA	2 cut(s)	1181, 1202
MspCI	CTTAAG	1 cut(s)	1201
MunI	CAATTG	1 cut(s)	472
MvaI	CCWGG	4 cut(s)	13, 31, 1374, 1395
MvnI	CGCG	2 cut(s)	345, 1326
NaeI	GCCGGC	2 cut(s)	311, 971
NarI	GGCGCC	1 cut(s)	27
NciI	CCSGG	7 cut(s)	315, 316, 327, 654, 688, 793, 1402
NcoI	CCATGG	1 cut(s)	168
NdeII	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
NgoMIV	GCCGGC	2 cut(s)	309, 969
NlaIII	CATG	5 cut(s)	172, 1019, 1234, 1283, 1505
NmeAIII	GCCGAG	9 cut(s)	64, 70, 79, 112, 264, 283, 519, 1065, 1101
NmuCI	GTSAC	1 cut(s)	121
NotI	GCGGCCGC	1 cut(s)	277
NsbI	TGCGCA	1 cut(s)	984
NspI	RCATGY	1 cut(s)	1234
PaqCI	CACCTGC	1 cut(s)	829
PasI	CCCWGGG	1 cut(s)	12
PceI	AGGCCT	5 cut(s)	643, 868, 949, 1372, 1393
PdiI	GCCGGC	2 cut(s)	311, 971
PdmI	GAANNNNTTC	1 cut(s)	1528
PfeI	GAWTC	6 cut(s)	509, 698, 1217, 1463, 1548, 1596
PflFI	GACNNNGTC	1 cut(s)	464
PflMI	CCANNNNNTGG	1 cut(s)	12
PinAI	ACCGGT	1 cut(s)	525
Ple19I	CGATCG	1 cut(s)	1499
PleI	GAGTC	6 cut(s)	97, 188, 344, 911, 1247, 1643
PluTI	GGCGCC	1 cut(s)	30
PpsI	GAGTC	6 cut(s)	97, 188, 344, 911, 1247, 1643
PpuMI	RGGWCCY	2 cut(s)	704, 1004
PsiI	TTATAA	1 cut(s)	906
Psp124BI	GAGCTC	1 cut(s)	69
Psp5II	RGGWCCY	2 cut(s)	704, 1004
Psp6I	CCWGG	4 cut(s)	11, 29, 1372, 1393
PspEI	GGTNACC	1 cut(s)	1580
PspFI	CCCAGC	3 cut(s)	104, 720, 1266
PspGI	CCWGG	4 cut(s)	11, 29, 1372, 1393
PspOMI	GGGCCC	1 cut(s)	317
PspPPI	RGGWCCY	2 cut(s)	704, 1004
PsuI	RGATCY	3 cut(s)	383, 787, 1262
PsyI	GACNNNGTC	1 cut(s)	464
PvuI	CGATCG	1 cut(s)	1499
RigI	GGCCGGCC	1 cut(s)	313
RsaI	GTAC	2 cut(s)	272, 1290
RsaNI	GTAC	2 cut(s)	271, 1289
SacI	GAGCTC	1 cut(s)	69
SalI	GTCGAC	2 cut(s)	467, 516
SaqAI	TTAA	2 cut(s)	1181, 1202
Sau3AI	GATC	8 cut(s)	383, 668, 715, 787, 1123, 1262, 1320, 1496
SchI	GAGTC	6 cut(s)	98, 188, 344, 911, 1247, 1644
SduI	GDGCHC	3 cut(s)	69, 321, 961
SfaNI	GCATC	4 cut(s)	210, 1057, 1147, 1504
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
SfoI	GGCGCC	1 cut(s)	28
SinI	GGWCC	7 cut(s)	340, 416, 684, 704, 1004, 1377, 1398
SmaI	CCCGGG	1 cut(s)	316
SmlI	CTYRAG	2 cut(s)	110, 1201
SmoI	CTYRAG	2 cut(s)	110, 1201
SrfI	GCCCGGGC	1 cut(s)	316
Sse9I	AATT	5 cut(s)	161, 472, 880, 924, 1307
SseBI	AGGCCT	5 cut(s)	643, 868, 949, 1372, 1393
SspDI	GGCGCC	1 cut(s)	26
SspMI	CTAG	9 cut(s)	426, 453, 603, 666, 726, 774, 870, 1257, 1625
SstI	GAGCTC	1 cut(s)	69
StuI	AGGCCT	5 cut(s)	643, 868, 949, 1372, 1393
StyI	CCWWGG	3 cut(s)	168, 1552, 1600
TaaI	ACNGT	6 cut(s)	392, 501, 1131, 1238, 1246, 1440
TaiI	ACGT	1 cut(s)	804
TaqI	TCGA	6 cut(s)	468, 482, 507, 517, 989, 1495
TasI	AATT	5 cut(s)	161, 472, 880, 924, 1307
TatI	WGTACW	1 cut(s)	1288
TauI	GCSGC	8 cut(s)	38, 74, 77, 86, 279, 282, 291, 772
TfiI	GAWTC	6 cut(s)	509, 698, 1217, 1463, 1548, 1596
Tru1I	TTAA	2 cut(s)	1181, 1202
Tru9I	TTAA	2 cut(s)	1181, 1202
TscAI	CASTG	3 cut(s)	961, 985, 1243
TseFI	GTSAC	1 cut(s)	121
TseI	GCWGC	5 cut(s)	174, 649, 860, 1012, 1419
Tsp45I	GTSAC	1 cut(s)	121
TspMI	CCCGGG	1 cut(s)	314
TspRI	CASTG	3 cut(s)	961, 985, 1243
Tth111I	GACNNNGTC	1 cut(s)	464
Van91I	CCANNNNNTGG	1 cut(s)	12
Vha464I	CTTAAG	1 cut(s)	1201
VneI	GTGCAC	1 cut(s)	957
VpaK11BI	GGWCC	7 cut(s)	340, 416, 684, 704, 1004, 1377, 1398
XapI	RAATTY	2 cut(s)	161, 880
XceI	RCATGY	1 cut(s)	1234
XmaI	CCCGGG	1 cut(s)	314
XmiI	GTMKAC	3 cut(s)	468, 517, 1276
XmnI	GAANNNNTTC	1 cut(s)	1528
XspI	CTAG	9 cut(s)	426, 453, 603, 666, 726, 774, 870, 1257, 1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.