Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0014248

Physical Location & Seq

Genomic Coordinates Forward (+)

54725440 .. 54728736

Gene Structure 3297 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G028020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGTCCAAACCCTGGGGTGGTATCGGCGCCTGGGCCGCCGAGGCCGAGCGGTCCCAGAGCTTCCCCAGCCTCAAGGAAGCCGTCACCACCAAGCCCAAGAGCAAGAAGATGACCCTCTCCGAATTCACCATGAGCGCCAGTTTCTCCTCCGCCGACTCCACCCGCCTCACTCCCGACGAGATGCTCCGCCTCCCCACCGGCCCAAAAGAGCGCTCCGCCGAGGAAATGCAGTACGGCGGCCGCCTCGGCGGCGGGTTCTCCTCCTACGGCCGCCCCGGGCCCAATCCGGGTCGGGGCAGGGACCGCGAGGACTCGGATGGGTCGTGGGGAGGAGGTGGCAGAAGATCCTACGGTGGATTTGAAGACGACCGGAGGGGTCCGCCTTCTAGGGTTTCAGATTTGGATTTGCCGTCTAGGGCTGACGAGGTCGACAATTGGGCTTCGACAAAGAAGCCTATACAGTCATTCGATTCCGGTCGACAAAACCGGTATTCCTCGCTCGGCGGAGGCGGCGGTGGTGGTGGAGGTGTTGGTGGTGGTGCTGTTGGTGGAGCTTTTTCTAGGGCTGACGAGGTTGATAACTGGGCTACTGGGAAAAGGCCTGTGCAGCCCGGCCCTCCAGCTAGATCATCCACATTTGGGTCCGGGTATCGTGATTCGGGTCCCGAGCCTGATCGCTGGGCTAGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGATGGGGTTGAGAGAGAGCGGCCTAGATTGGTTTTGGATCCCCGGAGAGACGTAGTAGGGTTGAATGAGCCAGCTGCGGTGGTGAAGACCAATAAGCCAAACCCGTTTGGGGCAGCAAGGCCTAGAGAGGAGAATTTGGCCGACAAGGGCTTGGATTATAAGAAACTGGACTCCGAAATCGAGGCCAAGAAGACGAGTAGGCCTTCCAGTGCACATTCAAGCCGGCCTTCCAGTGCGCAATCGAGCAGGTCTGAGGGTCCTGCGCTGCATGGGATTGAGAATGTGGTAAAGCCGAGGCCGAAAGTAAACCCTTTTGGGGATGCCAAGCCGAGGGAAGTGTTACTGGAGGAGCGAGGTAAGGATTGGAGGAAGATTGATCAACAGTTGGAGCATCGCTCTGTTGACAGGCCCGAAACTGAGGAAGAAAAAAGATTAAAGGAAGAAATAGATGGCTTAAGGAAGGAACTTGAATCTAAAAATAACGTGAACAGTGAGACTGTGCAAGACTCTAGTGGATCCCAGCCAAGTCTACATGATATTGTACTTCAAAAGGAAAGGGAATTGGAGTTGCTGATCCGCGATTTGGATGACAAAGTTCGCTTTGGGCAGAAAGCCATTGACAGGCCTGGGTCTGGATCAGGCAGGCCTGGGTCCGGGGCAGGCAGGGCTGGCAGCTTTCTTGAAAGAACACCGTCTCATTCTGGGTCATTTGAAGATTCCAGAAATATGGAATATATGGATAGACCTCGATCGCATGGCAAAGGAGATGCGTGGGGAAGACCTTCTGATGACAGAAGGGGATTCCAAGGTAACAGGGAAAGGGGATTTCAAGGTAACCGAGAAGGAGGATTCCAAGGTAGCAGAGAAGGAGGATTTCTAGGGAACAGAGTCTTCCACAGGTCAAGTTCAAGAGAGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009505 GO:0009506 GO:0009987 GO:0010467 GO:0019538 GO:0030054 GO:0030312 GO:0034641 GO:0034645 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044464 GO:0046983 GO:0055044 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

eIF-4B

Protein Analysis

545

Amino Acids

59.14

Weight (kDa)

9.43

Isoelectric Point (pI)

57.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF-4B	PF06273	1 - 513	2.5e-217	Plant specific eukaryotic initiation factor 4B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13020
fragaria_vesca	FvH4_4g26000
malus_domestica	MD13G1098600.v1.1 MD16G1099600.v1.1
prunus_persica	Prupe.1G246800_v2.0.a1 Prupe.1G246800_v2.0.a1
pyrus_communis	pycom13g08630 pycom16g08470
rosa_chinensis	RchiOBHm_Chr4g0433421
rosa_laevigata	RLG00000006754
rosa_roxburghii	Rroxscaffold_5G00374970
rosa_rugosa	Rorug04G0268700
rosa_samantha	Rh4AG323400 Rh4BG331300 Rh4CG346600 Rh4DG327600
rosa_wichuraiana	Rw4G028020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	873
Acc16I	TGCGCA	1 cut(s)	951
Acc36I	ACCTGC	1 cut(s)	951
AccB1I	GGYRCC	1 cut(s)	26
AccB7I	CCANNNNNTGG	1 cut(s)	12
AccBSI	CCGCTC	2 cut(s)	49, 733
AccI	GTMKAC	3 cut(s)	429, 478, 1243
AccII	CGCG	2 cut(s)	306, 1293
AclWI	GGATC	7 cut(s)	339, 746, 759, 1224, 1237, 1282, 1357
AcoI	YGGCCR	3 cut(s)	238, 268, 852
AcsI	RAATTY	2 cut(s)	122, 847
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	2 cut(s)	233, 1257
AfeI	AGCGCT	1 cut(s)	212
AflII	CTTAAG	1 cut(s)	1168
AgeI	ACCGGT	1 cut(s)	486
AgsI	TTSAA	9 cut(s)	362, 778, 933, 1184, 1262, 1397, 1427, 1544, 1623
AjnI	CCWGG	4 cut(s)	11, 29, 1339, 1360
AluBI	AGCT	5 cut(s)	60, 554, 623, 788, 1389
AluI	AGCT	5 cut(s)	60, 554, 623, 788, 1389
Alw21I	GWGCWC	1 cut(s)	928
Alw26I	GTCTC	3 cut(s)	756, 1202, 1413
Alw44I	GTGCAC	1 cut(s)	924
AlwI	GGATC	7 cut(s)	339, 746, 759, 1224, 1237, 1282, 1357
Ama87I	CYCGRG	2 cut(s)	275, 665
Aor51HI	AGCGCT	1 cut(s)	212
ApaI	GGGCCC	1 cut(s)	282
ApaLI	GTGCAC	1 cut(s)	924
ApeKI	GCWGC	5 cut(s)	607, 788, 827, 979, 1386
ApoI	RAATTY	2 cut(s)	122, 847
AsiGI	ACCGGT	1 cut(s)	486
Asp700I	GAANNNNTTC	1 cut(s)	1495
AspLEI	GCGC	5 cut(s)	29, 137, 213, 952, 979
AsuC2I	CCSGG	7 cut(s)	276, 277, 288, 612, 646, 757, 1369
AsuHPI	GGTGA	4 cut(s)	76, 118, 725, 808
AvaI	CYCGRG	2 cut(s)	275, 665
AvaII	GGWCC	7 cut(s)	51, 301, 377, 642, 662, 971, 1365
BaeGI	GKGCMC	2 cut(s)	282, 928
BamHI	GGATCC	2 cut(s)	751, 1229
BanI	GGYRCC	1 cut(s)	26
BanII	GRGCYC	1 cut(s)	282
BbsI	GAAGAC	5 cut(s)	369, 806, 911, 1498, 1597
Bbv12I	GWGCWC	1 cut(s)	928
BbvI	GCAGC	5 cut(s)	619, 775, 839, 966, 1398
BccI	CCATC	4 cut(s)	311, 710, 1157, 1626
BceAI	ACGGC	4 cut(s)	65, 250, 283, 394
BciT130I	CCWGG	4 cut(s)	13, 31, 1341, 1362
BclI	TGATCA	1 cut(s)	1090
BcnI	CCSGG	7 cut(s)	276, 277, 288, 612, 646, 757, 1369
BcoDI	GTCTC	3 cut(s)	756, 1202, 1413
BfaI	CTAG	9 cut(s)	387, 414, 561, 624, 684, 738, 837, 1224, 1592
BfoI	RGCGCY	3 cut(s)	30, 138, 214
BfrI	CTTAAG	1 cut(s)	1168
BfuAI	ACCTGC	1 cut(s)	951
BglI	GCCNNNNNGGC	3 cut(s)	41, 246, 249
Bme18I	GGWCC	7 cut(s)	51, 301, 377, 642, 662, 971, 1365
BmeT110I	CYCGRG	2 cut(s)	275, 665
BmrI	ACTGGG	2 cut(s)	592, 600
BmsI	GCATC	4 cut(s)	171, 1024, 1114, 1471
BmuI	ACTGGG	2 cut(s)	592, 600
BpiI	GAAGAC	5 cut(s)	369, 806, 911, 1498, 1597
BplI	GAGNNNNNCTC	2 cut(s)	1094, 1126
BpmI	CTGGAG	2 cut(s)	603, 1079
BpuEI	CTTGAG	1 cut(s)	56
BpuMI	CCSGG	7 cut(s)	276, 277, 288, 612, 646, 757, 1369
BsaHI	GRCGYC	1 cut(s)	27
BsaWI	WCCGGW	3 cut(s)	369, 473, 486
Bse118I	RCCGGY	3 cut(s)	197, 486, 936
Bse1I	ACTGG	7 cut(s)	138, 587, 595, 885, 921, 945, 1062
BseBI	CCWGG	4 cut(s)	13, 31, 1341, 1362
BseGI	GGATG	4 cut(s)	322, 629, 1039, 1306
BseMII	CTCAG	2 cut(s)	957, 1122
BseNI	ACTGG	7 cut(s)	138, 587, 595, 885, 921, 945, 1062
BseRI	GAGGAG	9 cut(s)	136, 250, 345, 702, 705, 708, 711, 857, 1076
BseSI	GKGCMC	2 cut(s)	282, 928
BseX3I	CGGCCG	2 cut(s)	238, 268
BseXI	GCAGC	5 cut(s)	619, 775, 839, 966, 1398
BseYI	CCCAGC	3 cut(s)	65, 678, 1233
BsgI	GTGCAG	1 cut(s)	626
Bsh1236I	CGCG	2 cut(s)	306, 1293
Bsh1285I	CGRYCG	5 cut(s)	241, 271, 370, 478, 1466
BshNI	GGYRCC	1 cut(s)	26
BshTI	ACCGGT	1 cut(s)	486
BsiEI	CGRYCG	5 cut(s)	241, 271, 370, 478, 1466
BsiHKAI	GWGCWC	1 cut(s)	928
BsiHKCI	CYCGRG	2 cut(s)	275, 665
BslFI	GGGAC	3 cut(s)	37, 314, 648
BsmAI	GTCTC	3 cut(s)	756, 1202, 1413
BsmBI	CGTCTC	2 cut(s)	756, 1413
BsmFI	GGGAC	3 cut(s)	37, 314, 648
BsoBI	CYCGRG	2 cut(s)	275, 665
Bsp120I	GGGCCC	1 cut(s)	278
Bsp1286I	GDGCHC	2 cut(s)	282, 928
Bsp143I	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
BspCNI	CTCAG	2 cut(s)	958, 1123
BspFNI	CGCG	2 cut(s)	306, 1293
BspMI	ACCTGC	1 cut(s)	951
BspPI	GGATC	7 cut(s)	339, 746, 759, 1224, 1237, 1282, 1357
BspT107I	GGYRCC	1 cut(s)	26
BspTI	CTTAAG	1 cut(s)	1168
BsrBI	CCGCTC	2 cut(s)	49, 733
BsrFI	RCCGGY	3 cut(s)	197, 486, 936
BsrI	ACTGG	7 cut(s)	138, 587, 595, 885, 921, 945, 1062
BssAI	RCCGGY	3 cut(s)	197, 486, 936
BssMI	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	2 cut(s)	1519, 1567
Bst2UI	CCWGG	4 cut(s)	13, 31, 1341, 1362
Bst4CI	ACNGT	6 cut(s)	353, 462, 1098, 1205, 1213, 1407
BstACI	GRCGYC	1 cut(s)	27
BstAFI	CTTAAG	1 cut(s)	1168
BstC8I	GCNNGC	5 cut(s)	786, 938, 1358, 1375, 1384
BstDEI	CTNAG	2 cut(s)	966, 1131
BstEII	GGTNACC	1 cut(s)	1547
BstF5I	GGATG	4 cut(s)	322, 629, 1039, 1306
BstFNI	CGCG	2 cut(s)	306, 1293
BstH2I	RGCGCY	3 cut(s)	30, 138, 214
BstHHI	GCGC	5 cut(s)	29, 137, 213, 952, 979
BstKTI	GATC	9 cut(s)	347, 629, 676, 754, 1093, 1232, 1290, 1352, 1466
BstMAI	GTCTC	3 cut(s)	756, 1202, 1413
BstMBI	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
BstMCI	CGRYCG	5 cut(s)	241, 271, 370, 478, 1466
BstNI	CCWGG	4 cut(s)	13, 31, 1341, 1362
BstPI	GGTNACC	1 cut(s)	1547
BstSLI	GKGCMC	2 cut(s)	282, 928
BstUI	CGCG	2 cut(s)	306, 1293
BstV1I	GCAGC	5 cut(s)	619, 775, 839, 966, 1398
BstV2I	GAAGAC	5 cut(s)	369, 806, 911, 1498, 1597
BstX2I	RGATCY	3 cut(s)	344, 751, 1229
BstXI	CCANNNNNNTGG	1 cut(s)	1441
BstYI	RGATCY	3 cut(s)	344, 751, 1229
BstZI	CGGCCG	2 cut(s)	238, 268
BtgZI	GCGATG	1 cut(s)	1091
BtsCI	GGATG	4 cut(s)	322, 629, 1039, 1306
BtsIMutI	CAGTG	3 cut(s)	928, 952, 1210
BveI	ACCTGC	1 cut(s)	951
Cac8I	GCNNGC	5 cut(s)	786, 938, 1358, 1375, 1384
CciNI	GCGGCCGC	1 cut(s)	238
CfoI	GCGC	5 cut(s)	29, 137, 213, 952, 979
Cfr10I	RCCGGY	3 cut(s)	197, 486, 936
Cfr9I	CCCGGG	1 cut(s)	275
Csp6I	GTAC	2 cut(s)	232, 1256
CspAI	ACCGGT	1 cut(s)	486
CviAII	CATG	4 cut(s)	130, 983, 1247, 1469
CviQI	GTAC	2 cut(s)	232, 1256
DdeI	CTNAG	2 cut(s)	966, 1131
DinI	GGCGCC	1 cut(s)	28
DpnI	GATC	9 cut(s)	346, 628, 675, 753, 1092, 1231, 1289, 1351, 1465
DpnII	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
EaeI	YGGCCR	3 cut(s)	238, 268, 852
EagI	CGGCCG	2 cut(s)	238, 268
EciI	GGCGGA	5 cut(s)	139, 176, 205, 369, 519
EclXI	CGGCCG	2 cut(s)	238, 268
Eco130I	CCWWGG	2 cut(s)	1519, 1567
Eco147I	AGGCCT	5 cut(s)	601, 835, 916, 1339, 1360
Eco24I	GRGCYC	1 cut(s)	282
Eco47I	GGWCC	7 cut(s)	51, 301, 377, 642, 662, 971, 1365
Eco47III	AGCGCT	1 cut(s)	212
Eco52I	CGGCCG	2 cut(s)	238, 268
Eco88I	CYCGRG	2 cut(s)	275, 665
Eco91I	GGTNACC	1 cut(s)	1547
EcoO109I	RGGNCCY	2 cut(s)	662, 971
EcoO65I	GGTNACC	1 cut(s)	1547
EcoRI	GAATTC	1 cut(s)	122
EcoRII	CCWGG	4 cut(s)	11, 29, 1339, 1360
EcoT14I	CCWWGG	2 cut(s)	1519, 1567
EcoT38I	GRGCYC	1 cut(s)	282
EgeI	GGCGCC	1 cut(s)	28
EheI	GGCGCC	1 cut(s)	28
ErhI	CCWWGG	2 cut(s)	1519, 1567
Esp3I	CGTCTC	2 cut(s)	756, 1413
FaeI	CATG	4 cut(s)	133, 986, 1250, 1472
FaiI	YATR	9 cut(s)	131, 458, 873, 984, 1248, 1442, 1449, 1451, 1470
FalI	AAGNNNNNCTT	2 cut(s)	925, 957
FaqI	GGGAC	3 cut(s)	37, 314, 648
FatI	CATG	4 cut(s)	129, 982, 1246, 1468
FauI	CCCGC	2 cut(s)	170, 245
FbaI	TGATCA	1 cut(s)	1090
FblI	GTMKAC	3 cut(s)	429, 478, 1243
FokI	GGATG	4 cut(s)	329, 616, 1046, 1313
FriOI	GRGCYC	1 cut(s)	282
FspBI	CTAG	9 cut(s)	387, 414, 561, 624, 684, 738, 837, 1224, 1592
FspI	TGCGCA	1 cut(s)	951
GlaI	GCGC	5 cut(s)	28, 136, 212, 951, 978
GsaI	CCCAGC	3 cut(s)	69, 682, 1237
GsuI	CTGGAG	2 cut(s)	603, 1079
HaeII	RGCGCY	3 cut(s)	30, 138, 214
HhaI	GCGC	5 cut(s)	29, 137, 213, 952, 979
Hin1I	GRCGYC	1 cut(s)	27
Hin1II	CATG	4 cut(s)	133, 986, 1250, 1472
Hin6I	GCGC	5 cut(s)	27, 135, 211, 950, 977
HinP1I	GCGC	5 cut(s)	27, 135, 211, 950, 977
HincII	GTYRAC	3 cut(s)	430, 479, 1117
HindII	GTYRAC	3 cut(s)	430, 479, 1117
HphI	GGTGA	4 cut(s)	76, 118, 725, 808
Hpy166II	GTNNAC	7 cut(s)	430, 479, 926, 1021, 1117, 1201, 1244
Hpy188I	TCNGA	6 cut(s)	121, 316, 397, 889, 967, 1501
Hpy188III	TCNNGA	7 cut(s)	173, 653, 665, 1347, 1394, 1434, 1623
Hpy8I	GTNNAC	7 cut(s)	430, 479, 926, 1021, 1117, 1201, 1244
Hpy99I	CGWCG	1 cut(s)	179
HpyAV	CCTTC	8 cut(s)	393, 927, 951, 1168, 1503, 1506, 1550, 1574
HpyCH4III	ACNGT	6 cut(s)	353, 462, 1098, 1205, 1213, 1407
HpyCH4IV	ACGT	2 cut(s)	765, 1197
HpyCH4V	TGCA	5 cut(s)	229, 607, 926, 982, 1216
HpyF3I	CTNAG	2 cut(s)	966, 1131
HpySE526I	ACGT	2 cut(s)	765, 1197
Hsp92I	GRCGYC	1 cut(s)	27
Hsp92II	CATG	4 cut(s)	133, 986, 1250, 1472
HspAI	GCGC	5 cut(s)	27, 135, 211, 950, 977
KasI	GGCGCC	1 cut(s)	26
KflI	GGGWCCC	1 cut(s)	662
KroI	GCCGGC	1 cut(s)	936
KroNI	GCCGGC	1 cut(s)	938
Ksp22I	TGATCA	1 cut(s)	1090
Kzo9I	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
LmnI	GCTCC	5 cut(s)	189, 218, 551, 1063, 1102
Lsp1109I	GCAGC	5 cut(s)	619, 775, 839, 966, 1398
LweI	GCATC	4 cut(s)	171, 1024, 1114, 1471
MaeI	CTAG	9 cut(s)	387, 414, 561, 624, 684, 738, 837, 1224, 1592
MaeII	ACGT	2 cut(s)	765, 1197
MaeIII	GTNAC	4 cut(s)	82, 1053, 1523, 1547
MalI	GATC	9 cut(s)	346, 628, 675, 753, 1092, 1231, 1289, 1351, 1465
MbiI	CCGCTC	2 cut(s)	49, 733
MboI	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
MfeI	CAATTG	1 cut(s)	433
MflI	RGATCY	3 cut(s)	344, 751, 1229
MhlI	GDGCHC	2 cut(s)	282, 928
MluCI	AATT	4 cut(s)	122, 433, 847, 1274
Mly113I	GGCGCC	1 cut(s)	27
MlyI	GAGTC	5 cut(s)	149, 305, 878, 1214, 1611
MmeI	TCCRAC	1 cut(s)	1080
MroNI	GCCGGC	1 cut(s)	936
MroXI	GAANNNNTTC	1 cut(s)	1495
MseI	TTAA	2 cut(s)	1148, 1169
MspA1I	CMGCKG	1 cut(s)	788
MspCI	CTTAAG	1 cut(s)	1168
MunI	CAATTG	1 cut(s)	433
MvaI	CCWGG	4 cut(s)	13, 31, 1341, 1362
MvnI	CGCG	2 cut(s)	306, 1293
NaeI	GCCGGC	1 cut(s)	938
NarI	GGCGCC	1 cut(s)	27
NciI	CCSGG	7 cut(s)	276, 277, 288, 612, 646, 757, 1369
NdeII	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
NgoMIV	GCCGGC	1 cut(s)	936
NlaIII	CATG	4 cut(s)	133, 986, 1250, 1472
NmeAIII	GCCGAG	7 cut(s)	64, 70, 225, 244, 480, 1032, 1068
NmuCI	GTSAC	1 cut(s)	82
NotI	GCGGCCGC	1 cut(s)	238
NsbI	TGCGCA	1 cut(s)	951
PasI	CCCWGGG	1 cut(s)	12
PceI	AGGCCT	5 cut(s)	601, 835, 916, 1339, 1360
PcsI	WCGNNNNNNNCGW	1 cut(s)	320
PdiI	GCCGGC	1 cut(s)	938
PdmI	GAANNNNTTC	1 cut(s)	1495
PfeI	GAWTC	6 cut(s)	470, 656, 1184, 1430, 1515, 1563
PflFI	GACNNNGTC	1 cut(s)	425
PflMI	CCANNNNNTGG	1 cut(s)	12
PinAI	ACCGGT	1 cut(s)	486
Ple19I	CGATCG	1 cut(s)	1466
PleI	GAGTC	5 cut(s)	149, 305, 878, 1214, 1610
PluTI	GGCGCC	1 cut(s)	30
PpsI	GAGTC	5 cut(s)	149, 305, 878, 1214, 1610
PpuMI	RGGWCCY	2 cut(s)	662, 971
PsiI	TTATAA	1 cut(s)	873
Psp5II	RGGWCCY	2 cut(s)	662, 971
Psp6I	CCWGG	4 cut(s)	11, 29, 1339, 1360
PspEI	GGTNACC	1 cut(s)	1547
PspFI	CCCAGC	3 cut(s)	65, 678, 1233
PspGI	CCWGG	4 cut(s)	11, 29, 1339, 1360
PspOMI	GGGCCC	1 cut(s)	278
PspPPI	RGGWCCY	2 cut(s)	662, 971
PsuI	RGATCY	3 cut(s)	344, 751, 1229
PsyI	GACNNNGTC	1 cut(s)	425
PvuI	CGATCG	1 cut(s)	1466
PvuII	CAGCTG	1 cut(s)	788
RsaI	GTAC	2 cut(s)	233, 1257
RsaNI	GTAC	2 cut(s)	232, 1256
SalI	GTCGAC	2 cut(s)	428, 477
SaqAI	TTAA	2 cut(s)	1148, 1169
Sau3AI	GATC	9 cut(s)	344, 626, 673, 751, 1090, 1229, 1287, 1349, 1463
SchI	GAGTC	5 cut(s)	149, 305, 878, 1214, 1611
SduI	GDGCHC	2 cut(s)	282, 928
SfaNI	GCATC	4 cut(s)	171, 1024, 1114, 1471
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
SfoI	GGCGCC	1 cut(s)	28
SinI	GGWCC	7 cut(s)	51, 301, 377, 642, 662, 971, 1365
SmaI	CCCGGG	1 cut(s)	277
SmlI	CTYRAG	2 cut(s)	71, 1168
SmoI	CTYRAG	2 cut(s)	71, 1168
Sse9I	AATT	4 cut(s)	122, 433, 847, 1274
SseBI	AGGCCT	5 cut(s)	601, 835, 916, 1339, 1360
SspDI	GGCGCC	1 cut(s)	26
SspMI	CTAG	9 cut(s)	387, 414, 561, 624, 684, 738, 837, 1224, 1592
StuI	AGGCCT	5 cut(s)	601, 835, 916, 1339, 1360
StyI	CCWWGG	2 cut(s)	1519, 1567
TaaI	ACNGT	6 cut(s)	353, 462, 1098, 1205, 1213, 1407
TaiI	ACGT	2 cut(s)	768, 1200
TaqI	TCGA	7 cut(s)	429, 443, 468, 478, 894, 956, 1462
TasI	AATT	4 cut(s)	122, 433, 847, 1274
TatI	WGTACW	1 cut(s)	1255
TauI	GCSGC	7 cut(s)	38, 240, 243, 252, 273, 513, 736
TfiI	GAWTC	6 cut(s)	470, 656, 1184, 1430, 1515, 1563
Tru1I	TTAA	2 cut(s)	1148, 1169
Tru9I	TTAA	2 cut(s)	1148, 1169
TscAI	CASTG	3 cut(s)	928, 952, 1210
TseFI	GTSAC	1 cut(s)	82
TseI	GCWGC	5 cut(s)	607, 788, 827, 979, 1386
Tsp45I	GTSAC	1 cut(s)	82
TspMI	CCCGGG	1 cut(s)	275
TspRI	CASTG	3 cut(s)	928, 952, 1210
Tth111I	GACNNNGTC	1 cut(s)	425
Van91I	CCANNNNNTGG	1 cut(s)	12
Vha464I	CTTAAG	1 cut(s)	1168
VneI	GTGCAC	1 cut(s)	924
VpaK11BI	GGWCC	7 cut(s)	51, 301, 377, 642, 662, 971, 1365
XapI	RAATTY	2 cut(s)	122, 847
XmaI	CCCGGG	1 cut(s)	275
XmiI	GTMKAC	3 cut(s)	429, 478, 1243
XmnI	GAANNNNTTC	1 cut(s)	1495
XspI	CTAG	9 cut(s)	387, 414, 561, 624, 684, 738, 837, 1224, 1592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.