Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0014248

Physical Location & Seq

Genomic Coordinates Forward (+)

55139635 .. 55142918

Gene Structure 3284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG327600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGTCCAAACCCTGGGGTGTTATCGGCGCCTGGGCCGCCGAGGCCGAGCGAGCCGAGGCTGAGGAGCTCGCCGCCGCCCAAGCCGCCGAGTCCCAGAGCTTCCCCAGCCTCAAGGAAGCCGTCACCACCAAGCCCAAGAGCAAGAAGATGACCCTCTCCGAATTCACCATGGGCAGCAGTTTCTCCTCCGCCGACTCCACCCGCCTCACTCCCGACGAGATGCTCCGCCTCCCCACCGGCCCAAAAGAGCGCTCCGCCGAGGAAATGCAGTACGGCGGCCGCCTCGGCGGCGGGTTCTCCTCCTACGGCCGGCCCGGGCCCAATCCGGGTCGGGGCAGGGACCGCGAGGACTCAGATGGGTCGTGGGGAGGAGGTGGCAGAAGATCCTACGGTGGATTTGAAGACGACCGGAGGGGTCCGCCTTCTAGGGTTTCAGATTTGGATTTGCCGTCTAGGGCTGACGAGGTCGACAATTGGGCTTCGACGAAGAAGCCTATACAGTCATTCGATTCCGGTCGACAAAACCGGTATGCCTCGCTCGGCGGAGGCGGTGGTGGTGTTGGTGGTGGTGCTATTGGTGGAGCTTTTTCTAGGGCTGACGAGGTTGATAACTGGGCTACTGGGAAAAGGCCTGTGCAGCCCGGCCCTCCAGCTAGATCATCCACATTTGGGTCCGGGTTTCGTGATTCGGGTCCCGAGCCTGATCGCTGGGCTAGAGGAGGAGGAGGTGGTGGTGGTGATGGGGTTGAGAGAGAGCGGCCTAGATTGGTTTTGGATCCCCGGAGAGACGTAGGGTTGAATGAGCCACCTGCGGTGGTGAAGACCAATAAGCCAAGCCCGTTTGGGGCAGCAAGGCCTAGAGAGGAGAATTTGGCCGATAAGGGCTTGGATTATAAGAAACTGGACTCCGAAATTGAGGCCAAGAAGACGAGTAGGCCTTCCAGTGCACATTCAAGCCGGCCTTCCAGTGCGCAATCGAGCAGGTCTGAGGGTCCTGCGCTGCATGGGATTGAGAATGTGGTAAAGCCGAGGCCAAAAGTAAACCCTTTTGGGGATGCCAAGCCGAGGGAAGTGTTACTGGAGGAGCGAGGTAAGGATTGGAGGAAGATTGATCAACAGTTGGAGCATCGCTCTGTTGACAGACCCGAAACTGAGGAAGAAAAAAGATTAAAGGAAGAAATAGATGGCTTAAGGAAGGAACTTGAATCTAAAAATAACATGCACAGTGAAACTGTGCAAGACTCTAGTGGATCCCAGCCAAGTCTACATGATATTGTACTTCAAAAGGAAAGGGAATTGGAGTTGCTGATCCGCGATTTGGATGACAAAGTTCGCTTTGGGCAGAAAGCCATTGACAGGCCTGGGTCCGGAGCAGGCAGGCCTGGGTCCGGGGCAGGCAGGGCTGGCAGCTTTCTTGAAAGAACACCGTCTCATTCTGGGTCATTTGAAGATTCCAGAAATATGGAATATATGGATAGACCTCGATCGCATGGCAAAGGAGATGCGTGGGGAAGACCTTCTGATGACAGAAGGGGATTCCAAGGTAACAGGGAAAGGGGATTTCAAGGTAACCGAGAAGGAGGATTCCAAGGTAGCAGAGAAGGAGGATTTCTAGGGAACAGAGTCTTCCACAGGTCAAGTTCAAGAGAGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009505 GO:0009506 GO:0009987 GO:0010467 GO:0019538 GO:0030054 GO:0030312 GO:0034641 GO:0034645 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044464 GO:0046983 GO:0055044 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

eIF-4B

Protein Analysis

552

Amino Acids

60.06

Weight (kDa)

9.09

Isoelectric Point (pI)

58.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF-4B	PF06273	1 - 520	1e-231	Plant specific eukaryotic initiation factor 4B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13020
fragaria_vesca	FvH4_4g26000
malus_domestica	MD13G1098600.v1.1 MD16G1099600.v1.1
prunus_persica	Prupe.1G246800_v2.0.a1 Prupe.1G246800_v2.0.a1
pyrus_communis	pycom13g08630 pycom16g08470
rosa_chinensis	RchiOBHm_Chr4g0433421
rosa_laevigata	RLG00000006754
rosa_roxburghii	Rroxscaffold_5G00374970
rosa_rugosa	Rorug04G0268700
rosa_samantha	Rh4AG323400 Rh4BG331300 Rh4CG346600 Rh4DG327600
rosa_wichuraiana	Rw4G028020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	894
AarI	CACCTGC	1 cut(s)	817
Acc16I	TGCGCA	1 cut(s)	972
Acc36I	ACCTGC	2 cut(s)	817, 972
AccB1I	GGYRCC	1 cut(s)	26
AccB7I	CCANNNNNTGG	1 cut(s)	12
AccBSI	CCGCTC	1 cut(s)	757
AccI	GTMKAC	3 cut(s)	468, 517, 1264
AccII	CGCG	2 cut(s)	345, 1314
AccIII	TCCGGA	1 cut(s)	1367
AclWI	GGATC	6 cut(s)	378, 770, 783, 1245, 1258, 1303
AcoI	YGGCCR	3 cut(s)	277, 307, 873
AcsI	RAATTY	2 cut(s)	161, 868
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	2 cut(s)	272, 1278
AfeI	AGCGCT	1 cut(s)	251
AflII	CTTAAG	1 cut(s)	1189
AgeI	ACCGGT	1 cut(s)	525
AgsI	TTSAA	9 cut(s)	401, 799, 954, 1205, 1283, 1418, 1448, 1565, 1644
AjnI	CCWGG	4 cut(s)	11, 29, 1360, 1381
AluBI	AGCT	5 cut(s)	67, 99, 584, 653, 1410
AluI	AGCT	5 cut(s)	67, 99, 584, 653, 1410
Alw21I	GWGCWC	2 cut(s)	69, 949
Alw26I	GTCTC	2 cut(s)	780, 1434
Alw44I	GTGCAC	1 cut(s)	945
AlwI	GGATC	6 cut(s)	378, 770, 783, 1245, 1258, 1303
Ama87I	CYCGRG	2 cut(s)	314, 695
Aor13HI	TCCGGA	1 cut(s)	1367
Aor51HI	AGCGCT	1 cut(s)	251
ApaI	GGGCCC	1 cut(s)	321
ApaLI	GTGCAC	1 cut(s)	945
ApeKI	GCWGC	5 cut(s)	174, 637, 848, 1000, 1407
ApoI	RAATTY	2 cut(s)	161, 868
AsiGI	ACCGGT	1 cut(s)	525
Asp700I	GAANNNNTTC	1 cut(s)	1516
AspLEI	GCGC	4 cut(s)	29, 252, 973, 1000
AsuC2I	CCSGG	7 cut(s)	315, 316, 327, 642, 676, 781, 1390
AsuHPI	GGTGA	4 cut(s)	115, 157, 749, 829
AvaI	CYCGRG	2 cut(s)	314, 695
AvaII	GGWCC	7 cut(s)	340, 416, 672, 692, 992, 1365, 1386
BaeGI	GKGCMC	2 cut(s)	321, 949
BamHI	GGATCC	2 cut(s)	775, 1250
BanI	GGYRCC	1 cut(s)	26
BanII	GRGCYC	2 cut(s)	69, 321
BbsI	GAAGAC	5 cut(s)	408, 827, 932, 1519, 1618
Bbv12I	GWGCWC	2 cut(s)	69, 949
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	5 cut(s)	186, 649, 860, 987, 1419
BccI	CCATC	4 cut(s)	350, 734, 1178, 1647
BceAI	ACGGC	4 cut(s)	104, 289, 322, 433
BciT130I	CCWGG	4 cut(s)	13, 31, 1362, 1383
BclI	TGATCA	1 cut(s)	1111
BcnI	CCSGG	7 cut(s)	315, 316, 327, 642, 676, 781, 1390
BcoDI	GTCTC	2 cut(s)	780, 1434
BfaI	CTAG	9 cut(s)	426, 453, 591, 654, 714, 762, 858, 1245, 1613
BfoI	RGCGCY	2 cut(s)	30, 253
BfrI	CTTAAG	1 cut(s)	1189
BfuAI	ACCTGC	2 cut(s)	817, 972
BglI	GCCNNNNNGGC	3 cut(s)	41, 285, 288
Bme18I	GGWCC	7 cut(s)	340, 416, 672, 692, 992, 1365, 1386
BmeT110I	CYCGRG	2 cut(s)	314, 695
BmrI	ACTGGG	2 cut(s)	622, 630
BmsI	GCATC	4 cut(s)	210, 1045, 1135, 1492
BmuI	ACTGGG	2 cut(s)	622, 630
BpiI	GAAGAC	5 cut(s)	408, 827, 932, 1519, 1618
BplI	GAGNNNNNCTC	2 cut(s)	1115, 1147
BpmI	CTGGAG	2 cut(s)	633, 1100
Bpu10I	CCTNAGC	1 cut(s)	60
BpuEI	CTTGAG	1 cut(s)	95
BpuMI	CCSGG	7 cut(s)	315, 316, 327, 642, 676, 781, 1390
BsaHI	GRCGYC	1 cut(s)	27
BsaWI	WCCGGW	4 cut(s)	408, 512, 525, 1367
Bse118I	RCCGGY	4 cut(s)	236, 309, 525, 957
Bse1I	ACTGG	6 cut(s)	617, 625, 906, 942, 966, 1083
BseAI	TCCGGA	1 cut(s)	1367
BseBI	CCWGG	4 cut(s)	13, 31, 1362, 1383
BseGI	GGATG	3 cut(s)	659, 1060, 1327
BseMII	CTCAG	4 cut(s)	51, 366, 978, 1143
BseNI	ACTGG	6 cut(s)	617, 625, 906, 942, 966, 1083
BseRI	GAGGAG	9 cut(s)	77, 175, 289, 384, 732, 735, 738, 878, 1097
BseSI	GKGCMC	2 cut(s)	321, 949
BseX3I	CGGCCG	2 cut(s)	277, 307
BseXI	GCAGC	5 cut(s)	186, 649, 860, 987, 1419
BseYI	CCCAGC	3 cut(s)	104, 708, 1254
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	2 cut(s)	345, 1314
Bsh1285I	CGRYCG	5 cut(s)	280, 310, 409, 517, 1487
BshNI	GGYRCC	1 cut(s)	26
BshTI	ACCGGT	1 cut(s)	525
BsiEI	CGRYCG	5 cut(s)	280, 310, 409, 517, 1487
BsiHKAI	GWGCWC	2 cut(s)	69, 949
BsiHKCI	CYCGRG	2 cut(s)	314, 695
BslFI	GGGAC	3 cut(s)	76, 353, 678
BsmAI	GTCTC	2 cut(s)	780, 1434
BsmBI	CGTCTC	2 cut(s)	780, 1434
BsmFI	GGGAC	3 cut(s)	76, 353, 678
BsoBI	CYCGRG	2 cut(s)	314, 695
Bsp120I	GGGCCC	1 cut(s)	317
Bsp1286I	GDGCHC	3 cut(s)	69, 321, 949
Bsp13I	TCCGGA	1 cut(s)	1367
Bsp143I	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
Bsp19I	CCATGG	1 cut(s)	168
BspCNI	CTCAG	4 cut(s)	52, 365, 979, 1144
BspEI	TCCGGA	1 cut(s)	1367
BspFNI	CGCG	2 cut(s)	345, 1314
BspMI	ACCTGC	2 cut(s)	817, 972
BspPI	GGATC	6 cut(s)	378, 770, 783, 1245, 1258, 1303
BspT107I	GGYRCC	1 cut(s)	26
BspTI	CTTAAG	1 cut(s)	1189
BsrBI	CCGCTC	1 cut(s)	757
BsrFI	RCCGGY	4 cut(s)	236, 309, 525, 957
BsrI	ACTGG	6 cut(s)	617, 625, 906, 942, 966, 1083
BssAI	RCCGGY	4 cut(s)	236, 309, 525, 957
BssMI	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	3 cut(s)	168, 1540, 1588
Bst2UI	CCWGG	4 cut(s)	13, 31, 1362, 1383
Bst4CI	ACNGT	6 cut(s)	392, 501, 1119, 1226, 1234, 1428
BstACI	GRCGYC	1 cut(s)	27
BstAFI	CTTAAG	1 cut(s)	1189
BstC8I	GCNNGC	8 cut(s)	51, 69, 311, 959, 1375, 1379, 1396, 1405
BstDEI	CTNAG	4 cut(s)	60, 352, 987, 1152
BstDSI	CCRYGG	1 cut(s)	168
BstEII	GGTNACC	1 cut(s)	1568
BstF5I	GGATG	3 cut(s)	659, 1060, 1327
BstFNI	CGCG	2 cut(s)	345, 1314
BstH2I	RGCGCY	2 cut(s)	30, 253
BstHHI	GCGC	4 cut(s)	29, 252, 973, 1000
BstKTI	GATC	8 cut(s)	386, 659, 706, 778, 1114, 1253, 1311, 1487
BstMAI	GTCTC	2 cut(s)	780, 1434
BstMBI	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
BstMCI	CGRYCG	5 cut(s)	280, 310, 409, 517, 1487
BstNI	CCWGG	4 cut(s)	13, 31, 1362, 1383
BstNSI	RCATGY	1 cut(s)	1222
BstPI	GGTNACC	1 cut(s)	1568
BstSLI	GKGCMC	2 cut(s)	321, 949
BstUI	CGCG	2 cut(s)	345, 1314
BstV1I	GCAGC	5 cut(s)	186, 649, 860, 987, 1419
BstV2I	GAAGAC	5 cut(s)	408, 827, 932, 1519, 1618
BstX2I	RGATCY	3 cut(s)	383, 775, 1250
BstXI	CCANNNNNNTGG	1 cut(s)	1462
BstYI	RGATCY	3 cut(s)	383, 775, 1250
BstZI	CGGCCG	2 cut(s)	277, 307
BtgI	CCRYGG	1 cut(s)	168
BtgZI	GCGATG	1 cut(s)	1112
BtsCI	GGATG	3 cut(s)	659, 1060, 1327
BtsIMutI	CAGTG	3 cut(s)	949, 973, 1231
BveI	ACCTGC	2 cut(s)	817, 972
Cac8I	GCNNGC	8 cut(s)	51, 69, 311, 959, 1375, 1379, 1396, 1405
CciNI	GCGGCCGC	1 cut(s)	277
CfoI	GCGC	4 cut(s)	29, 252, 973, 1000
Cfr10I	RCCGGY	4 cut(s)	236, 309, 525, 957
Cfr9I	CCCGGG	1 cut(s)	314
Csp6I	GTAC	2 cut(s)	271, 1277
CspAI	ACCGGT	1 cut(s)	525
CviAII	CATG	5 cut(s)	169, 1004, 1219, 1268, 1490
CviQI	GTAC	2 cut(s)	271, 1277
DdeI	CTNAG	4 cut(s)	60, 352, 987, 1152
DinI	GGCGCC	1 cut(s)	28
DpnI	GATC	8 cut(s)	385, 658, 705, 777, 1113, 1252, 1310, 1486
DpnII	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
EaeI	YGGCCR	3 cut(s)	277, 307, 873
EagI	CGGCCG	2 cut(s)	277, 307
EciI	GGCGGA	5 cut(s)	178, 215, 244, 408, 558
Ecl136II	GAGCTC	1 cut(s)	67
EclXI	CGGCCG	2 cut(s)	277, 307
Eco130I	CCWWGG	3 cut(s)	168, 1540, 1588
Eco147I	AGGCCT	5 cut(s)	631, 856, 937, 1360, 1381
Eco24I	GRGCYC	2 cut(s)	69, 321
Eco47I	GGWCC	7 cut(s)	340, 416, 672, 692, 992, 1365, 1386
Eco47III	AGCGCT	1 cut(s)	251
Eco52I	CGGCCG	2 cut(s)	277, 307
Eco53kI	GAGCTC	1 cut(s)	67
Eco88I	CYCGRG	2 cut(s)	314, 695
Eco91I	GGTNACC	1 cut(s)	1568
EcoICRI	GAGCTC	1 cut(s)	67
EcoO109I	RGGNCCY	2 cut(s)	692, 992
EcoO65I	GGTNACC	1 cut(s)	1568
EcoRI	GAATTC	1 cut(s)	161
EcoRII	CCWGG	4 cut(s)	11, 29, 1360, 1381
EcoT14I	CCWWGG	3 cut(s)	168, 1540, 1588
EcoT38I	GRGCYC	2 cut(s)	69, 321
EgeI	GGCGCC	1 cut(s)	28
EheI	GGCGCC	1 cut(s)	28
ErhI	CCWWGG	3 cut(s)	168, 1540, 1588
Esp3I	CGTCTC	2 cut(s)	780, 1434
FaeI	CATG	5 cut(s)	172, 1007, 1222, 1271, 1493
FalI	AAGNNNNNCTT	2 cut(s)	946, 978
FaqI	GGGAC	3 cut(s)	76, 353, 678
FatI	CATG	5 cut(s)	168, 1003, 1218, 1267, 1489
FauI	CCCGC	2 cut(s)	209, 284
FbaI	TGATCA	1 cut(s)	1111
FblI	GTMKAC	3 cut(s)	468, 517, 1264
FokI	GGATG	3 cut(s)	646, 1067, 1334
FriOI	GRGCYC	2 cut(s)	69, 321
FseI	GGCCGGCC	1 cut(s)	313
FspBI	CTAG	9 cut(s)	426, 453, 591, 654, 714, 762, 858, 1245, 1613
FspI	TGCGCA	1 cut(s)	972
GlaI	GCGC	4 cut(s)	28, 251, 972, 999
GsaI	CCCAGC	3 cut(s)	108, 712, 1258
GsuI	CTGGAG	2 cut(s)	633, 1100
HaeII	RGCGCY	2 cut(s)	30, 253
HhaI	GCGC	4 cut(s)	29, 252, 973, 1000
Hin1I	GRCGYC	1 cut(s)	27
Hin1II	CATG	5 cut(s)	172, 1007, 1222, 1271, 1493
Hin6I	GCGC	4 cut(s)	27, 250, 971, 998
HinP1I	GCGC	4 cut(s)	27, 250, 971, 998
HincII	GTYRAC	3 cut(s)	469, 518, 1138
HindII	GTYRAC	3 cut(s)	469, 518, 1138
HphI	GGTGA	4 cut(s)	115, 157, 749, 829
Hpy166II	GTNNAC	6 cut(s)	469, 518, 947, 1042, 1138, 1265
Hpy188I	TCNGA	6 cut(s)	160, 355, 436, 910, 988, 1522
Hpy188III	TCNNGA	7 cut(s)	212, 683, 695, 1368, 1415, 1455, 1644
Hpy8I	GTNNAC	6 cut(s)	469, 518, 947, 1042, 1138, 1265
Hpy99I	CGWCG	2 cut(s)	218, 487
HpyAV	CCTTC	8 cut(s)	432, 948, 972, 1189, 1524, 1527, 1571, 1595
HpyCH4III	ACNGT	6 cut(s)	392, 501, 1119, 1226, 1234, 1428
HpyCH4IV	ACGT	1 cut(s)	789
HpyCH4V	TGCA	6 cut(s)	268, 637, 947, 1003, 1222, 1237
HpyF3I	CTNAG	4 cut(s)	60, 352, 987, 1152
HpySE526I	ACGT	1 cut(s)	789
Hsp92I	GRCGYC	1 cut(s)	27
Hsp92II	CATG	5 cut(s)	172, 1007, 1222, 1271, 1493
HspAI	GCGC	4 cut(s)	27, 250, 971, 998
KasI	GGCGCC	1 cut(s)	26
KflI	GGGWCCC	1 cut(s)	692
Kpn2I	TCCGGA	1 cut(s)	1367
KroI	GCCGGC	2 cut(s)	309, 957
KroNI	GCCGGC	2 cut(s)	311, 959
Ksp22I	TGATCA	1 cut(s)	1111
Kzo9I	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
LmnI	GCTCC	7 cut(s)	64, 228, 257, 581, 1084, 1123, 1370
Lsp1109I	GCAGC	5 cut(s)	186, 649, 860, 987, 1419
LweI	GCATC	4 cut(s)	210, 1045, 1135, 1492
MaeI	CTAG	9 cut(s)	426, 453, 591, 654, 714, 762, 858, 1245, 1613
MaeII	ACGT	1 cut(s)	789
MaeIII	GTNAC	4 cut(s)	121, 1074, 1544, 1568
MalI	GATC	8 cut(s)	385, 658, 705, 777, 1113, 1252, 1310, 1486
MbiI	CCGCTC	1 cut(s)	757
MboI	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
MfeI	CAATTG	1 cut(s)	472
MflI	RGATCY	3 cut(s)	383, 775, 1250
MhlI	GDGCHC	3 cut(s)	69, 321, 949
MluCI	AATT	5 cut(s)	161, 472, 868, 912, 1295
Mly113I	GGCGCC	1 cut(s)	27
MlyI	GAGTC	6 cut(s)	98, 188, 344, 899, 1235, 1632
MmeI	TCCRAC	1 cut(s)	1101
MroI	TCCGGA	1 cut(s)	1367
MroNI	GCCGGC	2 cut(s)	309, 957
MroXI	GAANNNNTTC	1 cut(s)	1516
MseI	TTAA	2 cut(s)	1169, 1190
MspCI	CTTAAG	1 cut(s)	1189
MunI	CAATTG	1 cut(s)	472
MvaI	CCWGG	4 cut(s)	13, 31, 1362, 1383
MvnI	CGCG	2 cut(s)	345, 1314
NaeI	GCCGGC	2 cut(s)	311, 959
NarI	GGCGCC	1 cut(s)	27
NciI	CCSGG	7 cut(s)	315, 316, 327, 642, 676, 781, 1390
NcoI	CCATGG	1 cut(s)	168
NdeII	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
NgoMIV	GCCGGC	2 cut(s)	309, 957
NlaIII	CATG	5 cut(s)	172, 1007, 1222, 1271, 1493
NmeAIII	GCCGAG	9 cut(s)	64, 70, 79, 112, 264, 283, 519, 1053, 1089
NmuCI	GTSAC	1 cut(s)	121
NotI	GCGGCCGC	1 cut(s)	277
NsbI	TGCGCA	1 cut(s)	972
NspI	RCATGY	1 cut(s)	1222
PaqCI	CACCTGC	1 cut(s)	817
PasI	CCCWGGG	1 cut(s)	12
PceI	AGGCCT	5 cut(s)	631, 856, 937, 1360, 1381
PdiI	GCCGGC	2 cut(s)	311, 959
PdmI	GAANNNNTTC	1 cut(s)	1516
PfeI	GAWTC	6 cut(s)	509, 686, 1205, 1451, 1536, 1584
PflFI	GACNNNGTC	1 cut(s)	464
PflMI	CCANNNNNTGG	1 cut(s)	12
PinAI	ACCGGT	1 cut(s)	525
Ple19I	CGATCG	1 cut(s)	1487
PleI	GAGTC	6 cut(s)	97, 188, 344, 899, 1235, 1631
PluTI	GGCGCC	1 cut(s)	30
PpsI	GAGTC	6 cut(s)	97, 188, 344, 899, 1235, 1631
PpuMI	RGGWCCY	2 cut(s)	692, 992
PsiI	TTATAA	1 cut(s)	894
Psp124BI	GAGCTC	1 cut(s)	69
Psp5II	RGGWCCY	2 cut(s)	692, 992
Psp6I	CCWGG	4 cut(s)	11, 29, 1360, 1381
PspEI	GGTNACC	1 cut(s)	1568
PspFI	CCCAGC	3 cut(s)	104, 708, 1254
PspGI	CCWGG	4 cut(s)	11, 29, 1360, 1381
PspOMI	GGGCCC	1 cut(s)	317
PspPPI	RGGWCCY	2 cut(s)	692, 992
PsuI	RGATCY	3 cut(s)	383, 775, 1250
PsyI	GACNNNGTC	1 cut(s)	464
PvuI	CGATCG	1 cut(s)	1487
RigI	GGCCGGCC	1 cut(s)	313
RsaI	GTAC	2 cut(s)	272, 1278
RsaNI	GTAC	2 cut(s)	271, 1277
SacI	GAGCTC	1 cut(s)	69
SalI	GTCGAC	2 cut(s)	467, 516
SaqAI	TTAA	2 cut(s)	1169, 1190
Sau3AI	GATC	8 cut(s)	383, 656, 703, 775, 1111, 1250, 1308, 1484
SchI	GAGTC	6 cut(s)	98, 188, 344, 899, 1235, 1632
SduI	GDGCHC	3 cut(s)	69, 321, 949
SfaNI	GCATC	4 cut(s)	210, 1045, 1135, 1492
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
SfoI	GGCGCC	1 cut(s)	28
SinI	GGWCC	7 cut(s)	340, 416, 672, 692, 992, 1365, 1386
SmaI	CCCGGG	1 cut(s)	316
SmlI	CTYRAG	2 cut(s)	110, 1189
SmoI	CTYRAG	2 cut(s)	110, 1189
SrfI	GCCCGGGC	1 cut(s)	316
Sse9I	AATT	5 cut(s)	161, 472, 868, 912, 1295
SseBI	AGGCCT	5 cut(s)	631, 856, 937, 1360, 1381
SspDI	GGCGCC	1 cut(s)	26
SspMI	CTAG	9 cut(s)	426, 453, 591, 654, 714, 762, 858, 1245, 1613
SstI	GAGCTC	1 cut(s)	69
StuI	AGGCCT	5 cut(s)	631, 856, 937, 1360, 1381
StyI	CCWWGG	3 cut(s)	168, 1540, 1588
TaaI	ACNGT	6 cut(s)	392, 501, 1119, 1226, 1234, 1428
TaiI	ACGT	1 cut(s)	792
TaqI	TCGA	6 cut(s)	468, 482, 507, 517, 977, 1483
TasI	AATT	5 cut(s)	161, 472, 868, 912, 1295
TatI	WGTACW	1 cut(s)	1276
TauI	GCSGC	8 cut(s)	38, 74, 77, 86, 279, 282, 291, 760
TfiI	GAWTC	6 cut(s)	509, 686, 1205, 1451, 1536, 1584
Tru1I	TTAA	2 cut(s)	1169, 1190
Tru9I	TTAA	2 cut(s)	1169, 1190
TscAI	CASTG	3 cut(s)	949, 973, 1231
TseFI	GTSAC	1 cut(s)	121
TseI	GCWGC	5 cut(s)	174, 637, 848, 1000, 1407
Tsp45I	GTSAC	1 cut(s)	121
TspMI	CCCGGG	1 cut(s)	314
TspRI	CASTG	3 cut(s)	949, 973, 1231
Tth111I	GACNNNGTC	1 cut(s)	464
Van91I	CCANNNNNTGG	1 cut(s)	12
Vha464I	CTTAAG	1 cut(s)	1189
VneI	GTGCAC	1 cut(s)	945
VpaK11BI	GGWCC	7 cut(s)	340, 416, 672, 692, 992, 1365, 1386
XapI	RAATTY	2 cut(s)	161, 868
XceI	RCATGY	1 cut(s)	1222
XmaI	CCCGGG	1 cut(s)	314
XmiI	GTMKAC	3 cut(s)	468, 517, 1264
XmnI	GAANNNNTTC	1 cut(s)	1516
XspI	CTAG	9 cut(s)	426, 453, 591, 654, 714, 762, 858, 1245, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.