Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0014248

Physical Location & Seq

Genomic Coordinates Forward (+)

55875005 .. 55878627

Gene Structure 3623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00374970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGTCCAAACCCTGGGGTGGTATCGGCGCCTGGGCCGCCGAGGCCGAGCGGGCCGAGGCTGAGGAGCTCGCCGCCGCCCAAGCCGCCGAGTCCCAGAGCTTCCCCAGCCTCAAGGAAGCCGTCACCACCAAGCCCAAGAAGAAGAAGACGACCCTGACCCTCTCCGAATTCACCATGGGCGGCAGTTTCTCCTCCGCCGGACCCACCCGCCTCACTCCCGACGAGATGCTCCGCCTCCCCACCGGCCCAAAAGAGCGCTCCGCCGACGAAATGCAGTACGGCGGCCGCCTCGGCGGCGGGTTCTCTTCCTACGGCCGCCCCGGCCCCAATCCGGGTCGGGGCAGGGACCGCGAGGACTCAGATGGGTCGTGGGGAGGAGGTGGCAGAAGATCCTACGGTGGATTTGAAGACGACCGGAGGGGTCCGCCTTCTAGGGTTTCCGATTTGGATTTGCCGTCTAGGGCTGACGAGGTCGACAATTGGGCCTCGACGAAGAAGCCTATACAGTCATTCGATTCCGGTCGACAAAACCGGTATGCCTCGCTCGGCGGAGGCGGCGGTGGTGGTGGAGGTGTTGGTGGTGGTGCTATTGGTGGAGCTTTTTCTAGGGCTGACGAGGTTGATAACTGGGCTACTGGGAAAAGGCCTGTCCAGCCCGGCCCTCCAGCTAGATCATCCACATTTGGGTCCGGGTTTCGTGATTCGGGTCCCGAGCCTGATCGCTGGGCTAGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGGTGGTGATGGGGTTGAGAGAGAGCGGCCTAGATTGGTTTTGGATCCCCGGAGAGACGTAGGGTTGAATGAGCCACCTGCGGTGGTGAAGACCAATAAGCCAAACCCGTTTGGGTTAGCAAGGCCTAGAGAGGAGAATTTGGCCGAGAAGGGCTTGGATTATAAGAAACTGGACTCCGAAATCGAGGCCAAGAAGACGAGTAGGCCTTCCAGTGCACATTCAAGCCGGCCTTCGAGTGCGCAATCGAGCAGGTCTGAGGGTCCTGCGCTGCATGGGATTGAGAATGTGGTAAAGCCGAGGCCGAAAGTAAACCCTTTTGGGGATGCCAAGCCGAGGGAAGTGTTACTGGAGGAGCGAGGTAAGGATTGGAGGAAGATTGATCAACAGTTGGAGCATCGCTCTGTTGACAGGCCTGAAACTGAGGAAGAAAAAAGATTAAAGGAAGAAATAGATGGCTTAAGGAAGGAACTTGAATCTAAAAATAACGTGAACAGTGAAACTGTGCAAGACTCGAGTGGCACCCAGCCAAGTCTACATGATATTGTACTTCAAAAGGAAAGGGAATTGGAGTTGCTGATCCGCGATTTGGATGACAAAGTTCGCTTTGGGCAGAAAGCCATTGACAGGCCTGGGTCCGGAGCAGGCAGGCCTGGGTCTGGGGCAGGCAGGGCTGGCAGCTTTCTTGAAAGAACACCTTCTCATTCTGGGTCATTTGAAGATTCCAGAAATATGGAATATATGGACAGACCTCGATCGCATGGCAAAGGAGATGCGTGGGGAAGGCCTTCTGATGACAGAAGGGGATTCCAAGGTAACAGGGAAAGGGGATTTCAAGGTAACCGAGAAGGAGGATTCCAAGGTAGCAGAGAAGGAGGATTTCTAGGGAACAGAGTCTTCCACAGGTCAAGTTCAAGAGAGAGATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003743 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009505 GO:0009506 GO:0009987 GO:0010467 GO:0019538 GO:0030054 GO:0030312 GO:0034641 GO:0034645 GO:0042802 GO:0042803 GO:0043043 GO:0043170 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044464 GO:0046983 GO:0055044 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

eIF-4B

Protein Analysis

561

Amino Acids

60.6

Weight (kDa)

9.28

Isoelectric Point (pI)

54.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
eIF-4B	PF06273	1 - 529	2.8e-230	Plant specific eukaryotic initiation factor 4B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13020
fragaria_vesca	FvH4_4g26000
malus_domestica	MD13G1098600.v1.1 MD16G1099600.v1.1
prunus_persica	Prupe.1G246800_v2.0.a1 Prupe.1G246800_v2.0.a1
pyrus_communis	pycom13g08630 pycom16g08470
rosa_chinensis	RchiOBHm_Chr4g0433421
rosa_laevigata	RLG00000006754
rosa_roxburghii	Rroxscaffold_5G00374970
rosa_rugosa	Rorug04G0268700
rosa_samantha	Rh4AG323400 Rh4BG331300 Rh4CG346600 Rh4DG327600
rosa_wichuraiana	Rw4G028020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	921
AarI	CACCTGC	1 cut(s)	844
Acc16I	TGCGCA	1 cut(s)	999
Acc36I	ACCTGC	2 cut(s)	844, 999
AccB1I	GGYRCC	2 cut(s)	26, 1277
AccB7I	CCANNNNNTGG	1 cut(s)	12
AccBSI	CCGCTC	2 cut(s)	49, 784
AccI	GTMKAC	3 cut(s)	474, 523, 1291
AccII	CGCG	2 cut(s)	351, 1341
AccIII	TCCGGA	1 cut(s)	1394
AclWI	GGATC	4 cut(s)	384, 797, 810, 1330
AcoI	YGGCCR	3 cut(s)	283, 313, 900
AcsI	RAATTY	2 cut(s)	167, 895
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	2 cut(s)	278, 1305
AfeI	AGCGCT	1 cut(s)	257
AflII	CTTAAG	1 cut(s)	1216
AgeI	ACCGGT	1 cut(s)	531
AgsI	TTSAA	9 cut(s)	407, 826, 981, 1232, 1310, 1445, 1475, 1592, 1671
AjnI	CCWGG	4 cut(s)	11, 29, 1387, 1408
AluBI	AGCT	5 cut(s)	67, 99, 599, 668, 1437
AluI	AGCT	5 cut(s)	67, 99, 599, 668, 1437
Alw21I	GWGCWC	2 cut(s)	69, 976
Alw26I	GTCTC	1 cut(s)	807
Alw44I	GTGCAC	1 cut(s)	972
AlwI	GGATC	4 cut(s)	384, 797, 810, 1330
Ama87I	CYCGRG	2 cut(s)	710, 1270
Aor13HI	TCCGGA	1 cut(s)	1394
Aor51HI	AGCGCT	1 cut(s)	257
ApaLI	GTGCAC	1 cut(s)	972
ApeKI	GCWGC	2 cut(s)	1027, 1434
ApoI	RAATTY	2 cut(s)	167, 895
AsiGI	ACCGGT	1 cut(s)	531
Asp700I	GAANNNNTTC	2 cut(s)	1453, 1543
AspLEI	GCGC	4 cut(s)	29, 258, 1000, 1027
AsuC2I	CCSGG	5 cut(s)	321, 333, 657, 691, 808
AsuHPI	GGTGA	4 cut(s)	115, 163, 776, 856
AvaI	CYCGRG	2 cut(s)	710, 1270
AvaII	GGWCC	7 cut(s)	200, 346, 422, 687, 707, 1019, 1392
BaeGI	GKGCMC	1 cut(s)	976
BamHI	GGATCC	1 cut(s)	802
BanI	GGYRCC	2 cut(s)	26, 1277
BanII	GRGCYC	1 cut(s)	69
BbsI	GAAGAC	5 cut(s)	152, 414, 854, 959, 1645
Bbv12I	GWGCWC	2 cut(s)	69, 976
BbvCI	CCTCAGC	1 cut(s)	60
BbvI	GCAGC	2 cut(s)	1014, 1446
BccI	CCATC	4 cut(s)	356, 761, 1205, 1674
BceAI	ACGGC	4 cut(s)	104, 295, 328, 439
BciT130I	CCWGG	4 cut(s)	13, 31, 1389, 1410
BclI	TGATCA	1 cut(s)	1138
BcnI	CCSGG	5 cut(s)	321, 333, 657, 691, 808
BcoDI	GTCTC	1 cut(s)	807
BfaI	CTAG	8 cut(s)	432, 459, 606, 669, 729, 789, 885, 1640
BfoI	RGCGCY	2 cut(s)	30, 259
BfrI	CTTAAG	1 cut(s)	1216
BfuAI	ACCTGC	2 cut(s)	844, 999
BglI	GCCNNNNNGGC	5 cut(s)	41, 50, 291, 294, 321
Bme1390I	CCNGG	9 cut(s)	13, 31, 321, 333, 657, 691, 808, 1389, 1410
Bme18I	GGWCC	7 cut(s)	200, 346, 422, 687, 707, 1019, 1392
BmeT110I	CYCGRG	2 cut(s)	710, 1270
BmrFI	CCNGG	9 cut(s)	13, 31, 321, 333, 657, 691, 808, 1389, 1410
BmrI	ACTGGG	2 cut(s)	637, 645
BmsI	GCATC	4 cut(s)	216, 1072, 1162, 1519
BmuI	ACTGGG	2 cut(s)	637, 645
BpiI	GAAGAC	5 cut(s)	152, 414, 854, 959, 1645
BplI	GAGNNNNNCTC	2 cut(s)	1142, 1174
BpmI	CTGGAG	2 cut(s)	648, 1127
Bpu10I	CCTNAGC	1 cut(s)	60
BpuEI	CTTGAG	1 cut(s)	95
BpuMI	CCSGG	5 cut(s)	321, 333, 657, 691, 808
BsaHI	GRCGYC	1 cut(s)	27
BsaWI	WCCGGW	4 cut(s)	414, 518, 531, 1394
Bse118I	RCCGGY	3 cut(s)	242, 531, 984
Bse1I	ACTGG	5 cut(s)	632, 640, 933, 969, 1110
BseAI	TCCGGA	1 cut(s)	1394
BseBI	CCWGG	4 cut(s)	13, 31, 1389, 1410
BseGI	GGATG	3 cut(s)	674, 1087, 1354
BseMII	CTCAG	4 cut(s)	51, 372, 1005, 1170
BseNI	ACTGG	5 cut(s)	632, 640, 933, 969, 1110
BseRI	GAGGAG	8 cut(s)	77, 181, 390, 747, 750, 753, 905, 1124
BseSI	GKGCMC	1 cut(s)	976
BseX3I	CGGCCG	2 cut(s)	283, 313
BseXI	GCAGC	2 cut(s)	1014, 1446
BseYI	CCCAGC	3 cut(s)	104, 723, 1281
Bsh1236I	CGCG	2 cut(s)	351, 1341
Bsh1285I	CGRYCG	5 cut(s)	286, 316, 415, 523, 1514
BshNI	GGYRCC	2 cut(s)	26, 1277
BshTI	ACCGGT	1 cut(s)	531
BsiEI	CGRYCG	5 cut(s)	286, 316, 415, 523, 1514
BsiHKAI	GWGCWC	2 cut(s)	69, 976
BsiHKCI	CYCGRG	2 cut(s)	710, 1270
BslFI	GGGAC	3 cut(s)	76, 359, 693
BsmAI	GTCTC	1 cut(s)	807
BsmBI	CGTCTC	1 cut(s)	807
BsmFI	GGGAC	3 cut(s)	76, 359, 693
BsoBI	CYCGRG	2 cut(s)	710, 1270
Bsp1286I	GDGCHC	2 cut(s)	69, 976
Bsp13I	TCCGGA	1 cut(s)	1394
Bsp143I	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
Bsp19I	CCATGG	1 cut(s)	174
BspCNI	CTCAG	4 cut(s)	52, 371, 1006, 1171
BspEI	TCCGGA	1 cut(s)	1394
BspFNI	CGCG	2 cut(s)	351, 1341
BspMI	ACCTGC	2 cut(s)	844, 999
BspPI	GGATC	4 cut(s)	384, 797, 810, 1330
BspT107I	GGYRCC	2 cut(s)	26, 1277
BspTI	CTTAAG	1 cut(s)	1216
BsrBI	CCGCTC	2 cut(s)	49, 784
BsrFI	RCCGGY	3 cut(s)	242, 531, 984
BsrI	ACTGG	5 cut(s)	632, 640, 933, 969, 1110
BssAI	RCCGGY	3 cut(s)	242, 531, 984
BssMI	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
BssNI	GRCGYC	1 cut(s)	27
BssT1I	CCWWGG	3 cut(s)	174, 1567, 1615
Bst2UI	CCWGG	4 cut(s)	13, 31, 1389, 1410
Bst4CI	ACNGT	5 cut(s)	398, 507, 1146, 1253, 1261
Bst6I	CTCTTC	1 cut(s)	310
BstACI	GRCGYC	1 cut(s)	27
BstAFI	CTTAAG	1 cut(s)	1216
BstC8I	GCNNGC	7 cut(s)	51, 69, 986, 1402, 1406, 1423, 1432
BstDEI	CTNAG	4 cut(s)	60, 358, 1014, 1179
BstDSI	CCRYGG	1 cut(s)	174
BstEII	GGTNACC	1 cut(s)	1595
BstF5I	GGATG	3 cut(s)	674, 1087, 1354
BstFNI	CGCG	2 cut(s)	351, 1341
BstH2I	RGCGCY	2 cut(s)	30, 259
BstHHI	GCGC	4 cut(s)	29, 258, 1000, 1027
BstKTI	GATC	7 cut(s)	392, 674, 721, 805, 1141, 1338, 1514
BstMAI	GTCTC	1 cut(s)	807
BstMBI	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
BstMCI	CGRYCG	5 cut(s)	286, 316, 415, 523, 1514
BstNI	CCWGG	4 cut(s)	13, 31, 1389, 1410
BstPI	GGTNACC	1 cut(s)	1595
BstSCI	CCNGG	9 cut(s)	11, 29, 319, 331, 655, 689, 806, 1387, 1408
BstSLI	GKGCMC	1 cut(s)	976
BstUI	CGCG	2 cut(s)	351, 1341
BstV1I	GCAGC	2 cut(s)	1014, 1446
BstV2I	GAAGAC	5 cut(s)	152, 414, 854, 959, 1645
BstX2I	RGATCY	2 cut(s)	389, 802
BstXI	CCANNNNNNTGG	1 cut(s)	1489
BstYI	RGATCY	2 cut(s)	389, 802
BstZI	CGGCCG	2 cut(s)	283, 313
BtgI	CCRYGG	1 cut(s)	174
BtgZI	GCGATG	1 cut(s)	1139
BtsCI	GGATG	3 cut(s)	674, 1087, 1354
BtsIMutI	CAGTG	2 cut(s)	976, 1258
BveI	ACCTGC	2 cut(s)	844, 999
Cac8I	GCNNGC	7 cut(s)	51, 69, 986, 1402, 1406, 1423, 1432
CciNI	GCGGCCGC	1 cut(s)	283
CfoI	GCGC	4 cut(s)	29, 258, 1000, 1027
Cfr10I	RCCGGY	3 cut(s)	242, 531, 984
Csp6I	GTAC	2 cut(s)	277, 1304
CspAI	ACCGGT	1 cut(s)	531
CviAII	CATG	4 cut(s)	175, 1031, 1295, 1517
CviQI	GTAC	2 cut(s)	277, 1304
DdeI	CTNAG	4 cut(s)	60, 358, 1014, 1179
DinI	GGCGCC	1 cut(s)	28
DpnI	GATC	7 cut(s)	391, 673, 720, 804, 1140, 1337, 1513
DpnII	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
EaeI	YGGCCR	3 cut(s)	283, 313, 900
EagI	CGGCCG	2 cut(s)	283, 313
Eam1104I	CTCTTC	1 cut(s)	310
EarI	CTCTTC	1 cut(s)	310
EciI	GGCGGA	5 cut(s)	184, 221, 250, 414, 564
Ecl136II	GAGCTC	1 cut(s)	67
EclXI	CGGCCG	2 cut(s)	283, 313
Eco130I	CCWWGG	3 cut(s)	174, 1567, 1615
Eco147I	AGGCCT	7 cut(s)	646, 883, 964, 1171, 1387, 1408, 1543
Eco24I	GRGCYC	1 cut(s)	69
Eco47I	GGWCC	7 cut(s)	200, 346, 422, 687, 707, 1019, 1392
Eco47III	AGCGCT	1 cut(s)	257
Eco52I	CGGCCG	2 cut(s)	283, 313
Eco53kI	GAGCTC	1 cut(s)	67
Eco88I	CYCGRG	2 cut(s)	710, 1270
Eco91I	GGTNACC	1 cut(s)	1595
EcoICRI	GAGCTC	1 cut(s)	67
EcoO109I	RGGNCCY	2 cut(s)	707, 1019
EcoO65I	GGTNACC	1 cut(s)	1595
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	4 cut(s)	11, 29, 1387, 1408
EcoT14I	CCWWGG	3 cut(s)	174, 1567, 1615
EcoT38I	GRGCYC	1 cut(s)	69
EgeI	GGCGCC	1 cut(s)	28
EheI	GGCGCC	1 cut(s)	28
ErhI	CCWWGG	3 cut(s)	174, 1567, 1615
Esp3I	CGTCTC	1 cut(s)	807
FaeI	CATG	4 cut(s)	178, 1034, 1298, 1520
FalI	AAGNNNNNCTT	4 cut(s)	973, 1005, 1438, 1470
FaqI	GGGAC	3 cut(s)	76, 359, 693
FatI	CATG	4 cut(s)	174, 1030, 1294, 1516
FauI	CCCGC	3 cut(s)	42, 215, 290
FbaI	TGATCA	1 cut(s)	1138
FblI	GTMKAC	3 cut(s)	474, 523, 1291
FokI	GGATG	3 cut(s)	661, 1094, 1361
FriOI	GRGCYC	1 cut(s)	69
FspBI	CTAG	8 cut(s)	432, 459, 606, 669, 729, 789, 885, 1640
FspI	TGCGCA	1 cut(s)	999
GlaI	GCGC	4 cut(s)	28, 257, 999, 1026
GsaI	CCCAGC	3 cut(s)	108, 727, 1285
GsuI	CTGGAG	2 cut(s)	648, 1127
HaeII	RGCGCY	2 cut(s)	30, 259
HhaI	GCGC	4 cut(s)	29, 258, 1000, 1027
Hin1I	GRCGYC	1 cut(s)	27
Hin1II	CATG	4 cut(s)	178, 1034, 1298, 1520
Hin6I	GCGC	4 cut(s)	27, 256, 998, 1025
HinP1I	GCGC	4 cut(s)	27, 256, 998, 1025
HincII	GTYRAC	3 cut(s)	475, 524, 1165
HindII	GTYRAC	3 cut(s)	475, 524, 1165
HphI	GGTGA	4 cut(s)	115, 163, 776, 856
Hpy166II	GTNNAC	7 cut(s)	475, 524, 974, 1069, 1165, 1249, 1292
Hpy188I	TCNGA	6 cut(s)	166, 361, 442, 937, 1015, 1549
Hpy188III	TCNNGA	7 cut(s)	218, 698, 710, 1395, 1442, 1482, 1671
Hpy8I	GTNNAC	7 cut(s)	475, 524, 974, 1069, 1165, 1249, 1292
Hpy99I	CGWCG	3 cut(s)	224, 269, 493
HpyCH4III	ACNGT	5 cut(s)	398, 507, 1146, 1253, 1261
HpyCH4IV	ACGT	2 cut(s)	816, 1245
HpyCH4V	TGCA	4 cut(s)	274, 974, 1030, 1264
HpyF3I	CTNAG	4 cut(s)	60, 358, 1014, 1179
HpySE526I	ACGT	2 cut(s)	816, 1245
Hsp92I	GRCGYC	1 cut(s)	27
Hsp92II	CATG	4 cut(s)	178, 1034, 1298, 1520
HspAI	GCGC	4 cut(s)	27, 256, 998, 1025
KasI	GGCGCC	1 cut(s)	26
KflI	GGGWCCC	1 cut(s)	707
Kpn2I	TCCGGA	1 cut(s)	1394
KroI	GCCGGC	1 cut(s)	984
KroNI	GCCGGC	1 cut(s)	986
Ksp22I	TGATCA	1 cut(s)	1138
Kzo9I	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
LmnI	GCTCC	7 cut(s)	64, 234, 263, 596, 1111, 1150, 1397
Lsp1109I	GCAGC	2 cut(s)	1014, 1446
LweI	GCATC	4 cut(s)	216, 1072, 1162, 1519
MaeI	CTAG	8 cut(s)	432, 459, 606, 669, 729, 789, 885, 1640
MaeII	ACGT	2 cut(s)	816, 1245
MaeIII	GTNAC	4 cut(s)	121, 1101, 1571, 1595
MalI	GATC	7 cut(s)	391, 673, 720, 804, 1140, 1337, 1513
MbiI	CCGCTC	2 cut(s)	49, 784
MboI	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
MfeI	CAATTG	1 cut(s)	478
MflI	RGATCY	2 cut(s)	389, 802
MhlI	GDGCHC	2 cut(s)	69, 976
MluCI	AATT	4 cut(s)	167, 478, 895, 1322
Mly113I	GGCGCC	1 cut(s)	27
MlyI	GAGTC	5 cut(s)	98, 350, 926, 1262, 1659
MmeI	TCCRAC	1 cut(s)	1128
MroI	TCCGGA	1 cut(s)	1394
MroNI	GCCGGC	1 cut(s)	984
MroXI	GAANNNNTTC	2 cut(s)	1453, 1543
MseI	TTAA	2 cut(s)	1196, 1217
MspCI	CTTAAG	1 cut(s)	1216
MspR9I	CCNGG	9 cut(s)	13, 31, 321, 333, 657, 691, 808, 1389, 1410
MunI	CAATTG	1 cut(s)	478
MvaI	CCWGG	4 cut(s)	13, 31, 1389, 1410
MvnI	CGCG	2 cut(s)	351, 1341
NaeI	GCCGGC	1 cut(s)	986
NarI	GGCGCC	1 cut(s)	27
NciI	CCSGG	5 cut(s)	321, 333, 657, 691, 808
NcoI	CCATGG	1 cut(s)	174
NdeII	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
NgoMIV	GCCGGC	1 cut(s)	984
NlaIII	CATG	4 cut(s)	178, 1034, 1298, 1520
NmeAIII	GCCGAG	9 cut(s)	64, 70, 79, 112, 270, 525, 928, 1080, 1116
NmuCI	GTSAC	1 cut(s)	121
NotI	GCGGCCGC	1 cut(s)	283
NsbI	TGCGCA	1 cut(s)	999
PaeR7I	CTCGAG	1 cut(s)	1270
PaqCI	CACCTGC	1 cut(s)	844
PasI	CCCWGGG	1 cut(s)	12
PceI	AGGCCT	7 cut(s)	646, 883, 964, 1171, 1387, 1408, 1543
PdiI	GCCGGC	1 cut(s)	986
PdmI	GAANNNNTTC	2 cut(s)	1453, 1543
PfeI	GAWTC	6 cut(s)	515, 701, 1232, 1478, 1563, 1611
PflFI	GACNNNGTC	1 cut(s)	470
PflMI	CCANNNNNTGG	1 cut(s)	12
PinAI	ACCGGT	1 cut(s)	531
Ple19I	CGATCG	1 cut(s)	1514
PleI	GAGTC	5 cut(s)	97, 350, 926, 1262, 1658
PluTI	GGCGCC	1 cut(s)	30
PpsI	GAGTC	5 cut(s)	97, 350, 926, 1262, 1658
PpuMI	RGGWCCY	2 cut(s)	707, 1019
PsiI	TTATAA	1 cut(s)	921
Psp124BI	GAGCTC	1 cut(s)	69
Psp5II	RGGWCCY	2 cut(s)	707, 1019
Psp6I	CCWGG	4 cut(s)	11, 29, 1387, 1408
PspEI	GGTNACC	1 cut(s)	1595
PspFI	CCCAGC	3 cut(s)	104, 723, 1281
PspGI	CCWGG	4 cut(s)	11, 29, 1387, 1408
PspPPI	RGGWCCY	2 cut(s)	707, 1019
PspXI	VCTCGAGB	1 cut(s)	1270
PsuI	RGATCY	2 cut(s)	389, 802
PsyI	GACNNNGTC	1 cut(s)	470
PvuI	CGATCG	1 cut(s)	1514
RsaI	GTAC	2 cut(s)	278, 1305
RsaNI	GTAC	2 cut(s)	277, 1304
SacI	GAGCTC	1 cut(s)	69
SalI	GTCGAC	2 cut(s)	473, 522
SaqAI	TTAA	2 cut(s)	1196, 1217
Sau3AI	GATC	7 cut(s)	389, 671, 718, 802, 1138, 1335, 1511
SchI	GAGTC	5 cut(s)	98, 350, 926, 1262, 1659
ScrFI	CCNGG	9 cut(s)	13, 31, 321, 333, 657, 691, 808, 1389, 1410
SduI	GDGCHC	2 cut(s)	69, 976
SfaNI	GCATC	4 cut(s)	216, 1072, 1162, 1519
SfiI	GGCCNNNNNGGCC	3 cut(s)	41, 50, 321
SfoI	GGCGCC	1 cut(s)	28
Sfr274I	CTCGAG	1 cut(s)	1270
SinI	GGWCC	7 cut(s)	200, 346, 422, 687, 707, 1019, 1392
SlaI	CTCGAG	1 cut(s)	1270
SmlI	CTYRAG	3 cut(s)	110, 1216, 1270
SmoI	CTYRAG	3 cut(s)	110, 1216, 1270
Sse9I	AATT	4 cut(s)	167, 478, 895, 1322
SseBI	AGGCCT	7 cut(s)	646, 883, 964, 1171, 1387, 1408, 1543
SspDI	GGCGCC	1 cut(s)	26
SspMI	CTAG	8 cut(s)	432, 459, 606, 669, 729, 789, 885, 1640
SstI	GAGCTC	1 cut(s)	69
StuI	AGGCCT	7 cut(s)	646, 883, 964, 1171, 1387, 1408, 1543
StyD4I	CCNGG	9 cut(s)	11, 29, 319, 331, 655, 689, 806, 1387, 1408
StyI	CCWWGG	3 cut(s)	174, 1567, 1615
TaaI	ACNGT	5 cut(s)	398, 507, 1146, 1253, 1261
TaiI	ACGT	2 cut(s)	819, 1248
TaqI	TCGA	9 cut(s)	474, 488, 513, 523, 942, 992, 1004, 1271, 1510
TasI	AATT	4 cut(s)	167, 478, 895, 1322
TatI	WGTACW	1 cut(s)	1303
TfiI	GAWTC	6 cut(s)	515, 701, 1232, 1478, 1563, 1611
Tru1I	TTAA	2 cut(s)	1196, 1217
Tru9I	TTAA	2 cut(s)	1196, 1217
TscAI	CASTG	2 cut(s)	976, 1258
TseFI	GTSAC	1 cut(s)	121
TseI	GCWGC	2 cut(s)	1027, 1434
Tsp45I	GTSAC	1 cut(s)	121
TspRI	CASTG	2 cut(s)	976, 1258
Tth111I	GACNNNGTC	1 cut(s)	470
Van91I	CCANNNNNTGG	1 cut(s)	12
Vha464I	CTTAAG	1 cut(s)	1216
VneI	GTGCAC	1 cut(s)	972
VpaK11BI	GGWCC	7 cut(s)	200, 346, 422, 687, 707, 1019, 1392
XapI	RAATTY	2 cut(s)	167, 895
XhoI	CTCGAG	1 cut(s)	1270
XmiI	GTMKAC	3 cut(s)	474, 523, 1291
XmnI	GAANNNNTTC	2 cut(s)	1453, 1543
XspI	CTAG	8 cut(s)	432, 459, 606, 669, 729, 789, 885, 1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.