Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010823

Physical Location & Seq

Genomic Coordinates Forward (+)

65712711 .. 65716663

Gene Structure 3953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41277

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGAAGCGACGCAAGTTCGACCCGGTGCTGTCTCACACTCGGCTGAGATTGCTTCAAATCCTCATGGCCACACTGTTGGTTTACTTTCTAATCACCAGCTTCGAAGCCCCGAAAACCGGGTGGGATTCCGGCGAGGAATACGACGCCTCGTTCGAGCTGTTTAGCGACTCGTCGTTGTCCAGAGAGGGGTTAACGGAAGCTTTGAGTAGGCCCACTGACGGCCCCCGGCTTCGAGGCTCGCCGTTTCAGACACCCGAGCGGAGAATGCGGGAGTCAAAGAGAGTCTCGGGTTTGGTTTTCGAGGAGGAGAAGACTCAGTTTGACGGAAATGTGAGTGAGGCGGACGAGGTTTTCGGGCTTCACAAGGCGGCCGCGGAGGCCTGGAGAGTGGGGAAGAAGCTCTGGGCCGAGATTGAGTCCGGCAAAATTGAATTGGACAAGTCCGAGAACCGGTCCGACCCGTGCCCGCATTCGTTTTCGGTGACCGGGTCCGAATTTCACGCCCGGAACCGGGTGATGGTGATCCCGTGCGGACTGACGCTGTGGTCGCACATTACGGTGGTGGGTACGCCGCGGTGGGCCCGCCCGGAGTATGATCCGAAGATTGCGGTGGTGAAGGAGGGGGAGGAGGCGGTGATGGTTTCGCAGTTCATGATGGAACTGCAGGGGTTGAAGAATGTGGAGGGGGAGGACCCGCCGAGAATATTGCATTTCAATCCGAGATTAAAGGGGGATTGGAGTAACAAGCCGGTGATTGAGCACAACACTTGTTATAGGATGCAATGGGGTTCGGCGCTCCGGTGTGAGGGCTGGCAATCCCGGGCTGATGAAGAAACCGTTGATGGACTGGTGAAATGCGAGAAGTGGATTCGTGATGATGATGATCGCTCGGAAGAATCAAAGGCCATATGGTGGTTGAACAGGTTGATAGCAGGGACAAGGAAGGTGACCATAGACTGGCCGTACCCTTTTGTAGAGGGCAGGATGTTTGTACTCACCTTGAGTGCTGGCTTGGAAGGTTATCATATCAATGTTGATGGTAGACATGTCACTTCTTTCCCTTATCGCACGGGATTTGTTCTCGAGGATGCCACCGGACTGTTTGTAAATGGAGATGTTGATGTGCACTCTGTCTATGCTGCCTCCTTACCTACATCACATCCTAGTTTTGCTCCACAGTTGCATCTTGAGATGGTTACTAAGTGGAAGGCTCCACCTCTTCCCTATGGGCATGTCGAGTTGTTCATTGGCATTCTTTCTGCTGGCAACCATTTTGCTGAGCGGATGGCTGTGAGGAAGTCCTGGATGCAGCATAAGTTAGTCAAGTCTTCACGTGTTGTTGCTCGTTTTTTTGTAGCATTGCATGGTAGAAAGGAAGTAAACCTGGAGCTAATGAAAGAAGTAGAATATTTTGGTGACATTGTTATAGTTCCTTATATGGATAACTATGATCTTGTAGTACTGAAGACCATAGCAATTTGTGAATATGGGGTTAGAACCGTGCCTGCAAAGTATATCATGAAGTGTGATGATGACACCTTTGTCCGGGTGGATGCTGTGCTCAAGGAAGCACGGAAAGCGCGTAAACATAGAAGCCTATATATAGGAAATTTGAACTACCACCACAAGCCTCTTCGTCATGGTAAATGGGCAGTGACATATGAGGAATGGCCAGAAGAAGATTATCCAACCTATGCAAATGGTCCAGGTTACATCGTCTCCTCCGATGTAGCAAAATTCATCCTATCTGAGTTTGAAAAGAACAAGTTGCGATTGTTCAAGATGGAAGATGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACGATTCTAGACCAGTGGAGTATGTGCACAGTTTGAAGTTCTGCCAACATGGGTGCATTGAAAACTATTACACTGCGCATTACCAATCCCCGAGGCAGATGATATGCATGTGGGGCAAATTGCAGCATAATGGGAAACCCCAATGCTGCAATATGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006029 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009507 GO:0009536 GO:0009791 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010384 GO:0010404 GO:0010405 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018208 GO:0018258 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048354 GO:0048359 GO:0048519 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0061458 GO:0065007 GO:0070085 GO:0071554 GO:0071704 GO:1900055 GO:1900056 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905622 GO:1990714 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal-bind_lectin Galactosyl_T

Protein Analysis

660

Amino Acids

76.05

Weight (kDa)

6.79

Isoelectric Point (pI)

42.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal-bind_lectin	PF00337	172 - 379	1.7e-26	Galactoside-binding lectin
Galactosyl_T	PF01762	427 - 607	6.9e-34	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27120 AT1G27120
fragaria_vesca	FvH4_4g35520 FvH4_4g35520 FvH4_4g35520
malus_domestica	MD13G1082500.v1.1 MD16G1081600.v1.1
prunus_persica	Prupe.1G264500_v2.0.a1 Prupe.1G264500_v2.0.a1
pyrus_communis	pycom16g07040
rosa_chinensis	RchiOBHm_Chr4g0445171
rosa_laevigata	RLG00000005761
rosa_multiflora	Rmu_sc0000050.1_g000038
rosa_roxburghii	Rroxscaffold_5G00385680
rosa_rugosa	Rorug04G0359600
rosa_samantha	Rh4AG420400 Rh4BG432300 Rh4CG446900 Rh4DG428400
rosa_wichuraiana	Rw4G036050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	544, 1541
Acc16I	TGCGCA	1 cut(s)	1899
AccB7I	CCANNNNNTGG	2 cut(s)	912, 957
AccBSI	CCGCTC	2 cut(s)	259, 1282
AccI	GTMKAC	1 cut(s)	1042
AccII	CGCG	3 cut(s)	374, 574, 1582
AclWI	GGATC	2 cut(s)	517, 590
AcoI	YGGCCR	4 cut(s)	66, 369, 959, 1670
AcsI	RAATTY	3 cut(s)	494, 1609, 1736
AcuI	CTGAAG	1 cut(s)	1484
AcvI	CACGTG	1 cut(s)	1334
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	4 cut(s)	568, 965, 993, 1461
AflIII	ACRYGT	2 cut(s)	1045, 1333
AgeI	ACCGGT	1 cut(s)	450
AjnI	CCWGG	4 cut(s)	380, 1301, 1383, 1705
AluBI	AGCT	5 cut(s)	99, 157, 200, 400, 1390
AluI	AGCT	5 cut(s)	99, 157, 200, 400, 1390
Alw21I	GWGCWC	4 cut(s)	762, 1128, 1563, 1851
Alw26I	GTCTC	3 cut(s)	36, 289, 1723
Alw44I	GTGCAC	2 cut(s)	1124, 1847
AlwI	GGATC	2 cut(s)	517, 590
Ama87I	CYCGRG	5 cut(s)	254, 286, 819, 1082, 1912
ApaI	GGGCCC	1 cut(s)	583
ApaLI	GTGCAC	2 cut(s)	1124, 1847
ApeKI	GCWGC	4 cut(s)	1139, 1309, 1945, 1968
ApoI	RAATTY	3 cut(s)	494, 1609, 1736
ArsI	GACNNNNNNTTYG	4 cut(s)	134, 166, 335, 367
AsiGI	ACCGGT	1 cut(s)	450
AspLEI	GCGC	3 cut(s)	796, 1582, 1900
AspS9I	GGNCC	9 cut(s)	210, 221, 405, 453, 489, 579, 580, 691, 1703
AsuII	TTCGAA	1 cut(s)	102
AvaI	CYCGRG	5 cut(s)	254, 286, 819, 1082, 1912
AvaII	GGWCC	4 cut(s)	453, 489, 691, 1703
BaeGI	GKGCMC	4 cut(s)	467, 583, 1128, 1851
BalI	TGGCCA	2 cut(s)	68, 1672
BanII	GRGCYC	1 cut(s)	583
BbrPI	CACGTG	1 cut(s)	1334
BbsI	GAAGAC	3 cut(s)	317, 1320, 1472
Bbv12I	GWGCWC	4 cut(s)	762, 1128, 1563, 1851
BbvI	GCAGC	4 cut(s)	1126, 1321, 1955, 1957
BccI	CCATC	8 cut(s)	511, 631, 649, 836, 1031, 1186, 1279, 1777
BceAI	ACGGC	3 cut(s)	226, 235, 946
BcgI	CGANNNNNNTGC	2 cut(s)	688, 722
BciT130I	CCWGG	4 cut(s)	382, 1303, 1385, 1707
BcoDI	GTCTC	3 cut(s)	36, 289, 1723
BfaI	CTAG	2 cut(s)	1164, 1830
BfmI	CTRYAG	1 cut(s)	662
BfoI	RGCGCY	1 cut(s)	797
BglI	GCCNNNNNGGC	1 cut(s)	377
BisI	GCNGC	7 cut(s)	369, 372, 572, 1140, 1310, 1946, 1969
BlpI	GCTNAGC	1 cut(s)	1278
BlsI	GCNGC	7 cut(s)	370, 373, 573, 1141, 1311, 1947, 1970
BmcAI	AGTACT	1 cut(s)	1461
Bme18I	GGWCC	4 cut(s)	453, 489, 691, 1703
BmeT110I	CYCGRG	5 cut(s)	254, 286, 819, 1082, 1912
BmgT120I	GGNCC	9 cut(s)	210, 221, 405, 453, 489, 579, 580, 691, 1703
BmiI	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
BmsI	GCATC	5 cut(s)	768, 1078, 1192, 1296, 1543
BpiI	GAAGAC	3 cut(s)	317, 1320, 1472
BpmI	CTGGAG	2 cut(s)	403, 1406
Bpu1102I	GCTNAGC	1 cut(s)	1278
Bpu14I	TTCGAA	1 cut(s)	102
BpuEI	CTTGAG	3 cut(s)	1021, 1208, 1547
BsaAI	YACGTR	1 cut(s)	1334
BsaBI	GATNNNNATC	2 cut(s)	521, 882
BsaHI	GRCGYC	1 cut(s)	144
BsaJI	CCNNGG	5 cut(s)	224, 372, 572, 819, 1913
BsaWI	WCCGGW	3 cut(s)	450, 798, 1094
BsaXI	ACNNNNNCTCC	2 cut(s)	1703, 1733
Bse118I	RCCGGY	2 cut(s)	450, 748
Bse1I	ACTGG	3 cut(s)	852, 962, 1835
Bse3DI	GCAATG	2 cut(s)	788, 1358
Bse8I	GATNNNNATC	2 cut(s)	521, 882
BseBI	CCWGG	4 cut(s)	382, 1303, 1385, 1707
BseDI	CCNNGG	5 cut(s)	224, 372, 572, 819, 1913
BseGI	GGATG	8 cut(s)	783, 990, 1093, 1159, 1290, 1311, 1558, 1740
BseJI	GATNNNNATC	2 cut(s)	521, 882
BseMI	GCAATG	2 cut(s)	788, 1358
BseMII	CTCAG	4 cut(s)	35, 329, 1269, 1740
BseNI	ACTGG	3 cut(s)	852, 962, 1835
BseRI	GAGGAG	4 cut(s)	317, 320, 641, 1711
BseSI	GKGCMC	4 cut(s)	467, 583, 1128, 1851
BseX3I	CGGCCG	1 cut(s)	369
BseXI	GCAGC	4 cut(s)	1126, 1321, 1955, 1957
Bsh1236I	CGCG	3 cut(s)	374, 574, 1582
Bsh1285I	CGRYCG	1 cut(s)	372
BshTI	ACCGGT	1 cut(s)	450
BsiEI	CGRYCG	1 cut(s)	372
BsiHKAI	GWGCWC	4 cut(s)	762, 1128, 1563, 1851
BsiHKCI	CYCGRG	5 cut(s)	254, 286, 819, 1082, 1912
BslFI	GGGAC	1 cut(s)	949
BsmAI	GTCTC	3 cut(s)	36, 289, 1723
BsmBI	CGTCTC	1 cut(s)	1723
BsmFI	GGGAC	1 cut(s)	949
BsmI	GAATGC	3 cut(s)	270, 469, 1251
BsoBI	CYCGRG	5 cut(s)	254, 286, 819, 1082, 1912
Bsp119I	TTCGAA	1 cut(s)	102
Bsp120I	GGGCCC	1 cut(s)	579
Bsp1286I	GDGCHC	6 cut(s)	467, 583, 762, 1128, 1563, 1851
Bsp143I	GATC	4 cut(s)	522, 595, 883, 1450
Bsp1720I	GCTNAGC	1 cut(s)	1278
BspCNI	CTCAG	4 cut(s)	36, 328, 1270, 1741
BspFNI	CGCG	3 cut(s)	374, 574, 1582
BspHI	TCATGA	2 cut(s)	651, 1518
BspLI	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
BspMAI	CTGCAG	1 cut(s)	666
BspPI	GGATC	2 cut(s)	517, 590
BspT104I	TTCGAA	1 cut(s)	102
BsrBI	CCGCTC	2 cut(s)	259, 1282
BsrDI	GCAATG	2 cut(s)	788, 1358
BsrFI	RCCGGY	2 cut(s)	450, 748
BsrI	ACTGG	3 cut(s)	852, 962, 1835
BssAI	RCCGGY	2 cut(s)	450, 748
BssECI	CCNNGG	5 cut(s)	224, 372, 572, 819, 1913
BssMI	GATC	4 cut(s)	522, 595, 883, 1450
BssNI	GRCGYC	1 cut(s)	144
Bst2UI	CCWGG	4 cut(s)	382, 1303, 1385, 1707
Bst4CI	ACNGT	7 cut(s)	75, 559, 838, 1101, 1179, 1501, 1853
Bst6I	CTCTTC	2 cut(s)	1224, 1638
BstACI	GRCGYC	1 cut(s)	144
BstBAI	YACGTR	1 cut(s)	1334
BstBI	TTCGAA	1 cut(s)	102
BstC8I	GCNNGC	7 cut(s)	239, 467, 583, 812, 1009, 1264, 1506
BstDEI	CTNAG	5 cut(s)	44, 315, 1200, 1278, 1749
BstDSI	CCRYGG	2 cut(s)	372, 572
BstEII	GGTNACC	2 cut(s)	481, 946
BstF5I	GGATG	8 cut(s)	783, 990, 1093, 1159, 1290, 1311, 1558, 1740
BstFNI	CGCG	3 cut(s)	374, 574, 1582
BstH2I	RGCGCY	1 cut(s)	797
BstHHI	GCGC	3 cut(s)	796, 1582, 1900
BstKTI	GATC	4 cut(s)	525, 598, 886, 1453
BstMAI	GTCTC	3 cut(s)	36, 289, 1723
BstMBI	GATC	4 cut(s)	522, 595, 883, 1450
BstMCI	CGRYCG	1 cut(s)	372
BstMWI	GCNNNNNNNGC	6 cut(s)	49, 265, 377, 547, 1577, 1935
BstNI	CCWGG	4 cut(s)	382, 1303, 1385, 1707
BstNSI	RCATGY	3 cut(s)	1049, 1235, 1933
BstPI	GGTNACC	2 cut(s)	481, 946
BstSFI	CTRYAG	1 cut(s)	662
BstSLI	GKGCMC	4 cut(s)	467, 583, 1128, 1851
BstUI	CGCG	3 cut(s)	374, 574, 1582
BstV1I	GCAGC	4 cut(s)	1126, 1321, 1955, 1957
BstV2I	GAAGAC	3 cut(s)	317, 1320, 1472
BstXI	CCANNNNNNTGG	1 cut(s)	76
BstZI	CGGCCG	1 cut(s)	369
BtgI	CCRYGG	2 cut(s)	372, 572
BtsCI	GGATG	8 cut(s)	783, 990, 1093, 1159, 1290, 1311, 1558, 1740
BtsI	GCAGTG	2 cut(s)	1659, 1893
BtsIMutI	CAGTG	5 cut(s)	71, 213, 1659, 1842, 1893
Cac8I	GCNNGC	7 cut(s)	239, 467, 583, 812, 1009, 1264, 1506
CciI	TCATGA	2 cut(s)	651, 1518
CciNI	GCGGCCGC	1 cut(s)	369
CfoI	GCGC	3 cut(s)	796, 1582, 1900
Cfr10I	RCCGGY	2 cut(s)	450, 748
Cfr13I	GGNCC	9 cut(s)	210, 221, 405, 453, 489, 579, 580, 691, 1703
Cfr42I	CCGCGG	2 cut(s)	375, 575
Cfr9I	CCCGGG	1 cut(s)	819
CpoI	CGGWCCG	1 cut(s)	453
CseI	GACGC	3 cut(s)	18, 152, 547
Csp6I	GTAC	4 cut(s)	567, 964, 992, 1460
CspAI	ACCGGT	1 cut(s)	450
CspI	CGGWCCG	1 cut(s)	453
CviQI	GTAC	4 cut(s)	567, 964, 992, 1460
DdeI	CTNAG	5 cut(s)	44, 315, 1200, 1278, 1749
DpnI	GATC	4 cut(s)	524, 597, 885, 1452
DpnII	GATC	4 cut(s)	522, 595, 883, 1450
DrdI	GACNNNNNNGTC	2 cut(s)	544, 1541
DseDI	GACNNNNNNGTC	2 cut(s)	544, 1541
EaeI	YGGCCR	4 cut(s)	66, 369, 959, 1670
EagI	CGGCCG	1 cut(s)	369
Eam1104I	CTCTTC	2 cut(s)	1224, 1638
EarI	CTCTTC	2 cut(s)	1224, 1638
EciI	GGCGGA	1 cut(s)	356
EclXI	CGGCCG	1 cut(s)	369
Eco147I	AGGCCT	1 cut(s)	380
Eco24I	GRGCYC	1 cut(s)	583
Eco47I	GGWCC	4 cut(s)	453, 489, 691, 1703
Eco52I	CGGCCG	1 cut(s)	369
Eco57I	CTGAAG	1 cut(s)	1484
Eco72I	CACGTG	1 cut(s)	1334
Eco88I	CYCGRG	5 cut(s)	254, 286, 819, 1082, 1912
Eco91I	GGTNACC	2 cut(s)	481, 946
EcoO109I	RGGNCCY	1 cut(s)	691
EcoO65I	GGTNACC	2 cut(s)	481, 946
EcoRII	CCWGG	4 cut(s)	380, 1301, 1383, 1705
EcoT22I	ATGCAT	1 cut(s)	1931
EcoT38I	GRGCYC	1 cut(s)	583
Esp3I	CGTCTC	1 cut(s)	1723
FaqI	GGGAC	1 cut(s)	949
FauI	CCCGC	4 cut(s)	261, 474, 590, 702
FauNDI	CATATG	2 cut(s)	908, 1660
FblI	GTMKAC	1 cut(s)	1042
Fnu4HI	GCNGC	7 cut(s)	369, 372, 572, 1140, 1310, 1946, 1969
FokI	GGATG	8 cut(s)	790, 997, 1100, 1146, 1297, 1318, 1565, 1727
FriOI	GRGCYC	1 cut(s)	583
Fsp4HI	GCNGC	7 cut(s)	369, 372, 572, 1140, 1310, 1946, 1969
FspBI	CTAG	2 cut(s)	1164, 1830
FspI	TGCGCA	1 cut(s)	1899
GlaI	GCGC	3 cut(s)	795, 1581, 1899
GluI	GCNGC	7 cut(s)	369, 372, 572, 1140, 1310, 1946, 1969
GsuI	CTGGAG	2 cut(s)	403, 1406
HaeII	RGCGCY	1 cut(s)	797
HgaI	GACGC	3 cut(s)	18, 152, 547
HhaI	GCGC	3 cut(s)	796, 1582, 1900
Hin1I	GRCGYC	1 cut(s)	144
Hin6I	GCGC	3 cut(s)	794, 1580, 1898
HinP1I	GCGC	3 cut(s)	794, 1580, 1898
HincII	GTYRAC	1 cut(s)	192
HindII	GTYRAC	1 cut(s)	192
HindIII	AAGCTT	1 cut(s)	198
HinfI	GANTC	9 cut(s)	125, 167, 272, 282, 313, 416, 868, 896, 1826
HpaI	GTTAAC	1 cut(s)	192
Hpy166II	GTNNAC	7 cut(s)	82, 192, 1043, 1126, 1381, 1586, 1849
Hpy188I	TCNGA	9 cut(s)	249, 445, 457, 493, 600, 720, 892, 1726, 1750
Hpy188III	TCNNGA	8 cut(s)	180, 652, 872, 1082, 1187, 1519, 1780, 1830
Hpy8I	GTNNAC	7 cut(s)	82, 192, 1043, 1126, 1381, 1586, 1849
Hpy99I	CGWCG	3 cut(s)	12, 146, 175
HpyAV	CCTTC	4 cut(s)	610, 937, 1010, 1201
HpyCH4III	ACNGT	7 cut(s)	75, 559, 838, 1101, 1179, 1501, 1853
HpyCH4IV	ACGT	1 cut(s)	1333
HpyF10VI	GCNNNNNNNGC	6 cut(s)	49, 265, 377, 547, 1577, 1935
HpyF3I	CTNAG	5 cut(s)	44, 315, 1200, 1278, 1749
HpySE526I	ACGT	1 cut(s)	1333
Hsp92I	GRCGYC	1 cut(s)	144
HspAI	GCGC	3 cut(s)	794, 1580, 1898
KspAI	GTTAAC	1 cut(s)	192
KspI	CCGCGG	2 cut(s)	375, 575
Kzo9I	GATC	4 cut(s)	522, 595, 883, 1450
LmnI	GCTCC	5 cut(s)	801, 1177, 1216, 1387, 1813
Lsp1109I	GCAGC	4 cut(s)	1126, 1321, 1955, 1957
LweI	GCATC	5 cut(s)	768, 1078, 1192, 1296, 1543
MaeI	CTAG	2 cut(s)	1164, 1830
MaeII	ACGT	1 cut(s)	1333
MaeIII	GTNAC	8 cut(s)	481, 740, 946, 1048, 1195, 1415, 1654, 1709
MalI	GATC	4 cut(s)	524, 597, 885, 1452
MbiI	CCGCTC	2 cut(s)	259, 1282
MboI	GATC	4 cut(s)	522, 595, 883, 1450
MhlI	GDGCHC	6 cut(s)	467, 583, 762, 1128, 1563, 1851
MlsI	TGGCCA	2 cut(s)	68, 1672
MluCI	AATT	7 cut(s)	426, 431, 494, 1476, 1609, 1736, 1940
MluNI	TGGCCA	2 cut(s)	68, 1672
MlyI	GAGTC	5 cut(s)	161, 281, 291, 307, 425
MmeI	TCCRAC	2 cut(s)	480, 1712
Mox20I	TGGCCA	2 cut(s)	68, 1672
Mph1103I	ATGCAT	1 cut(s)	1931
MscI	TGGCCA	2 cut(s)	68, 1672
MseI	TTAA	2 cut(s)	191, 725
MslI	CAYNNNNRTG	3 cut(s)	557, 1029, 1802
Msp20I	TGGCCA	2 cut(s)	68, 1672
MspA1I	CMGCKG	2 cut(s)	374, 574
Mva1269I	GAATGC	3 cut(s)	270, 469, 1251
MvaI	CCWGG	4 cut(s)	382, 1303, 1385, 1707
MvnI	CGCG	3 cut(s)	374, 574, 1582
MwoI	GCNNNNNNNGC	6 cut(s)	49, 265, 377, 547, 1577, 1935
NdeI	CATATG	2 cut(s)	908, 1660
NdeII	GATC	4 cut(s)	522, 595, 883, 1450
NlaIV	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
NmeAIII	GCCGAG	3 cut(s)	19, 433, 723
NmuCI	GTSAC	5 cut(s)	481, 946, 1048, 1415, 1654
NotI	GCGGCCGC	1 cut(s)	369
NsbI	TGCGCA	1 cut(s)	1899
NsiI	ATGCAT	1 cut(s)	1931
NspI	RCATGY	3 cut(s)	1049, 1235, 1933
NspV	TTCGAA	1 cut(s)	102
PaeR7I	CTCGAG	1 cut(s)	1082
PagI	TCATGA	2 cut(s)	651, 1518
PceI	AGGCCT	1 cut(s)	380
PciI	ACATGT	1 cut(s)	1045
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 1579, 1722
PctI	GAATGC	3 cut(s)	270, 469, 1251
PfeI	GAWTC	4 cut(s)	125, 868, 896, 1826
PflFI	GACNNNGTC	1 cut(s)	487
PflMI	CCANNNNNTGG	2 cut(s)	912, 957
PfoI	TCCNGGA	1 cut(s)	1301
PinAI	ACCGGT	1 cut(s)	450
PkrI	GCNGC	7 cut(s)	370, 373, 573, 1141, 1311, 1947, 1970
PleI	GAGTC	5 cut(s)	161, 280, 290, 307, 424
PmaCI	CACGTG	1 cut(s)	1334
PmlI	CACGTG	1 cut(s)	1334
PpsI	GAGTC	5 cut(s)	161, 280, 290, 307, 424
Ppu21I	YACGTR	1 cut(s)	1334
PpuMI	RGGWCCY	1 cut(s)	691
PscI	ACATGT	1 cut(s)	1045
Psp5II	RGGWCCY	1 cut(s)	691
Psp6I	CCWGG	4 cut(s)	380, 1301, 1383, 1705
PspCI	CACGTG	1 cut(s)	1334
PspEI	GGTNACC	2 cut(s)	481, 946
PspGI	CCWGG	4 cut(s)	380, 1301, 1383, 1705
PspN4I	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
PspOMI	GGGCCC	1 cut(s)	579
PspPI	GGNCC	9 cut(s)	210, 221, 405, 453, 489, 579, 580, 691, 1703
PspPPI	RGGWCCY	1 cut(s)	691
PstI	CTGCAG	1 cut(s)	666
PsyI	GACNNNGTC	1 cut(s)	487
RsaI	GTAC	4 cut(s)	568, 965, 993, 1461
RsaNI	GTAC	4 cut(s)	567, 964, 992, 1460
RseI	CAYNNNNRTG	3 cut(s)	557, 1029, 1802
Rsr2I	CGGWCCG	1 cut(s)	453
RsrII	CGGWCCG	1 cut(s)	453
SacII	CCGCGG	2 cut(s)	375, 575
SaqAI	TTAA	2 cut(s)	191, 725
SatI	GCNGC	7 cut(s)	369, 372, 572, 1140, 1310, 1946, 1969
Sau3AI	GATC	4 cut(s)	522, 595, 883, 1450
Sau96I	GGNCC	9 cut(s)	210, 221, 405, 453, 489, 579, 580, 691, 1703
ScaI	AGTACT	1 cut(s)	1461
SchI	GAGTC	5 cut(s)	161, 281, 291, 307, 425
SduI	GDGCHC	6 cut(s)	467, 583, 762, 1128, 1563, 1851
SfaNI	GCATC	5 cut(s)	768, 1078, 1192, 1296, 1543
SfcI	CTRYAG	1 cut(s)	662
SfiI	GGCCNNNNNGGCC	1 cut(s)	377
Sfr274I	CTCGAG	1 cut(s)	1082
Sfr303I	CCGCGG	2 cut(s)	375, 575
SfuI	TTCGAA	1 cut(s)	102
SgrBI	CCGCGG	2 cut(s)	375, 575
SinI	GGWCC	4 cut(s)	453, 489, 691, 1703
SlaI	CTCGAG	1 cut(s)	1082
SmaI	CCCGGG	1 cut(s)	821
SmiMI	CAYNNNNRTG	3 cut(s)	557, 1029, 1802
SmlI	CTYRAG	4 cut(s)	1000, 1082, 1187, 1562
SmoI	CTYRAG	4 cut(s)	1000, 1082, 1187, 1562
Sse9I	AATT	7 cut(s)	426, 431, 494, 1476, 1609, 1736, 1940
SseBI	AGGCCT	1 cut(s)	380
SspI	AATATT	2 cut(s)	705, 1409
SspMI	CTAG	2 cut(s)	1164, 1830
StuI	AGGCCT	1 cut(s)	380
TaaI	ACNGT	7 cut(s)	75, 559, 838, 1101, 1179, 1501, 1853
TaiI	ACGT	1 cut(s)	1336
TaqI	TCGA	7 cut(s)	18, 102, 153, 232, 300, 1083, 1236
TasI	AATT	7 cut(s)	426, 431, 494, 1476, 1609, 1736, 1940
TatI	WGTACW	2 cut(s)	991, 1459
TauI	GCSGC	3 cut(s)	371, 374, 574
TfiI	GAWTC	4 cut(s)	125, 868, 896, 1826
Tru1I	TTAA	2 cut(s)	191, 725
Tru9I	TTAA	2 cut(s)	191, 725
TscAI	CASTG	5 cut(s)	78, 220, 1659, 1842, 1900
TseFI	GTSAC	5 cut(s)	481, 946, 1048, 1415, 1654
TseI	GCWGC	4 cut(s)	1139, 1309, 1945, 1968
Tsp45I	GTSAC	5 cut(s)	481, 946, 1048, 1415, 1654
TspDTI	ATGAA	7 cut(s)	17, 640, 843, 1234, 1409, 1535, 1729
TspGWI	ACGGA	3 cut(s)	209, 339, 1588
TspMI	CCCGGG	1 cut(s)	819
TspRI	CASTG	5 cut(s)	78, 220, 1659, 1842, 1900
Tth111I	GACNNNGTC	1 cut(s)	487
Van91I	CCANNNNNTGG	2 cut(s)	912, 957
VneI	GTGCAC	2 cut(s)	1124, 1847
VpaK11BI	GGWCC	4 cut(s)	453, 489, 691, 1703
XapI	RAATTY	3 cut(s)	494, 1609, 1736
XbaI	TCTAGA	1 cut(s)	1829
XceI	RCATGY	3 cut(s)	1049, 1235, 1933
XhoI	CTCGAG	1 cut(s)	1082
XmaI	CCCGGG	1 cut(s)	819
XmiI	GTMKAC	1 cut(s)	1042
XspI	CTAG	2 cut(s)	1164, 1830
ZrmI	AGTACT	1 cut(s)	1461
Zsp2I	ATGCAT	1 cut(s)	1931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.