Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0010823

Physical Location & Seq

Genomic Coordinates Forward (+)

71771098 .. 71776680

Gene Structure 5583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG420400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGAAGCGACGCAAGTTCGACCCGGTGCTGTCTCACACTCGGCTGAGATTGCTTCAAATCCTCATGGCCACACTGTTGGTTTACTTTCTAATCACCAGCTTCGAAGCCCCGAAAACCGGGTGGGATTCCGGCGAGGAATACGACGCCTCGTTCGAGCTGTTTAGCGACTCGTCGTTGTCCAGAGAGGGGTTAACGGAAGCTTTGAGTAGGCCCACTGACGGCCCCCGGCTTCGAGGCTCGCCGTTTCAGACACCCGAGCGGAGAATGCGGGAGTCAAAGAGAGTCTCGGGTTTGGTTTTCGAGGAGGAGAAGACTCAGTTTGACGGAAATGTGAGTGAGGCGGACGAGGTTTTCGGGCTTCACAAGGCGGCCGCGGAGGCATGGAGAGTGGGGAAGAAGCTCTGGGCCGAGATTGAGTCCGGCAAAATTGAATTGGACAAGTCCGAGAACCGGTCCGACCCGTGCCCGCATTCGTTTTCTGTAACCGGGTCCGAATTTCACGCCCGGAACCGGGTGATGGTGATCCCGTGCGGACTGACGCTGTGGTCGCACATTACGGTGGTGGGTACGCCGCGGTGGGCCCGCCCGGAATATGATCCGAAGATTGCGGTGGTGAAGGAGGGGGAGGAGGCGGTGATGGTTTCGCAGTTCATGATGGAACTGCAGGGGTTGAAGAATGTGGAGGGGGAGGACCCGCCGAGAATATTGCATTTCAATCCGAGATTAAAGGGGGATTGGAGTAACAAGCCGGTGATTGAGCACAACACTTGTTATAGGATGCAATGGGGTTCGGCGCTCCGGTGTGAGGGCTGGCAATCCCGGGCTGATGAAGAAACCGTTGATGGACTGGTGAAATGCGAGAAGTGGATTCGTGATGATGATGATCGCTCGGAAGAATCAAAGGCCATATGGTGGTTGAACAGGTTGATAGCAGGGACAAGGAAGGTGACCATAGACTGGCCGTACCCTTTTGTAGAGGGCAGGATGTTTGTACTCACCTTGAGTGCTGGCTTGGAAGGTTATCATATCAATGTTGATGGTAGACATGTCACTTCTTTCCCTTATCGCACGGGATTTGTTCTCGAGGATGCCACCGGACTGTTTGTAAATGGAGATGTTGATGTGCACTCTGTCTATGCTGCCTCCTTACCTACATCACATCCTAGTTTTGCTCCACAGATGCATCTTGAGATGGTTACTAAGTGGAAGGCTCCACCTCTTCCCTATGGGCATGTCGAGTTGTTCATTGGCATTCTTTCTGCTGGCAACCATTTTGCTGAGCGGATGGCTGTGAGGAAGTCCTGGATGCAGCATAAGTTAGTCAAGTCTTCACGTGTTGTTGCTCGTTTTTTTGTAGCATTGGTAAGGGTGATTGTGGAATGCATGTATAGCTTTATGATACAGCTTTTAAGTTTATATTATAACTGCTTGGTTTTAATTCTATGTCAAAGATCTCACAGCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006029 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009507 GO:0009536 GO:0009791 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010384 GO:0010404 GO:0010405 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018208 GO:0018258 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048354 GO:0048359 GO:0048519 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0061458 GO:0065007 GO:0070085 GO:0071554 GO:0071704 GO:1900055 GO:1900056 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905622 GO:1990714 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal-bind_lectin Galactosyl_T

Protein Analysis

488

Amino Acids

55.75

Weight (kDa)

6.62

Isoelectric Point (pI)

46.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal-bind_lectin	PF00337	172 - 379	8.8e-27	Galactoside-binding lectin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010823)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27120 AT1G27120
fragaria_vesca	FvH4_4g35520 FvH4_4g35520 FvH4_4g35520
malus_domestica	MD13G1082500.v1.1 MD16G1081600.v1.1
prunus_persica	Prupe.1G264500_v2.0.a1 Prupe.1G264500_v2.0.a1
pyrus_communis	pycom16g07040
rosa_chinensis	RchiOBHm_Chr4g0445171
rosa_laevigata	RLG00000005761
rosa_multiflora	Rmu_sc0000050.1_g000038
rosa_roxburghii	Rroxscaffold_5G00385680
rosa_rugosa	Rorug04G0359600
rosa_samantha	Rh4AG420400 Rh4BG432300 Rh4CG446900 Rh4DG428400
rosa_wichuraiana	Rw4G036050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1422
AasI	GACNNNNNNGTC	1 cut(s)	544
AccB7I	CCANNNNNTGG	2 cut(s)	912, 957
AccBSI	CCGCTC	2 cut(s)	259, 1282
AccI	GTMKAC	1 cut(s)	1042
AccII	CGCG	2 cut(s)	374, 574
AclWI	GGATC	2 cut(s)	517, 590
AcoI	YGGCCR	3 cut(s)	66, 369, 959
AcsI	RAATTY	1 cut(s)	494
AcvI	CACGTG	1 cut(s)	1334
AcyI	GRCGYC	1 cut(s)	144
AfaI	GTAC	3 cut(s)	568, 965, 993
AflIII	ACRYGT	2 cut(s)	1045, 1333
AgeI	ACCGGT	1 cut(s)	450
AgsI	TTSAA	5 cut(s)	56, 431, 673, 715, 919
AjnI	CCWGG	1 cut(s)	1301
AluBI	AGCT	7 cut(s)	99, 157, 200, 400, 1392, 1405, 1461
AluI	AGCT	7 cut(s)	99, 157, 200, 400, 1392, 1405, 1461
Alw21I	GWGCWC	2 cut(s)	762, 1128
Alw26I	GTCTC	2 cut(s)	36, 289
Alw44I	GTGCAC	1 cut(s)	1124
AlwI	GGATC	2 cut(s)	517, 590
Ama87I	CYCGRG	4 cut(s)	254, 286, 819, 1082
AoxI	GGCC	8 cut(s)	66, 209, 220, 369, 405, 579, 903, 959
ApaI	GGGCCC	1 cut(s)	583
ApaLI	GTGCAC	1 cut(s)	1124
ApeKI	GCWGC	2 cut(s)	1139, 1309
ApoI	RAATTY	1 cut(s)	494
ArsI	GACNNNNNNTTYG	4 cut(s)	134, 166, 335, 367
AsiGI	ACCGGT	1 cut(s)	450
AspLEI	GCGC	1 cut(s)	796
AspS9I	GGNCC	8 cut(s)	210, 221, 405, 453, 489, 579, 580, 691
AsuC2I	CCSGG	9 cut(s)	23, 118, 226, 487, 505, 512, 587, 820, 821
AsuII	TTCGAA	1 cut(s)	102
AvaI	CYCGRG	4 cut(s)	254, 286, 819, 1082
AvaII	GGWCC	3 cut(s)	453, 489, 691
BaeGI	GKGCMC	3 cut(s)	467, 583, 1128
BalI	TGGCCA	1 cut(s)	68
BanII	GRGCYC	1 cut(s)	583
BbrPI	CACGTG	1 cut(s)	1334
BbsI	GAAGAC	2 cut(s)	317, 1320
Bbv12I	GWGCWC	2 cut(s)	762, 1128
BbvI	GCAGC	2 cut(s)	1126, 1321
BccI	CCATC	7 cut(s)	511, 631, 649, 836, 1031, 1186, 1279
BceAI	ACGGC	3 cut(s)	226, 235, 946
BcgI	CGANNNNNNTGC	2 cut(s)	688, 722
BciT130I	CCWGG	1 cut(s)	1303
BcnI	CCSGG	9 cut(s)	23, 118, 226, 487, 505, 512, 587, 820, 821
BcoDI	GTCTC	2 cut(s)	36, 289
BfaI	CTAG	1 cut(s)	1164
BfmI	CTRYAG	1 cut(s)	662
BfoI	RGCGCY	1 cut(s)	797
BglI	GCCNNNNNGGC	1 cut(s)	377
BglII	AGATCT	1 cut(s)	1451
BisI	GCNGC	5 cut(s)	369, 372, 572, 1140, 1310
BlpI	GCTNAGC	1 cut(s)	1278
BlsI	GCNGC	5 cut(s)	370, 373, 573, 1141, 1311
Bme18I	GGWCC	3 cut(s)	453, 489, 691
BmeT110I	CYCGRG	4 cut(s)	254, 286, 819, 1082
BmgT120I	GGNCC	8 cut(s)	210, 221, 405, 453, 489, 579, 580, 691
BmiI	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
BmsI	GCATC	5 cut(s)	768, 1078, 1170, 1192, 1296
BpiI	GAAGAC	2 cut(s)	317, 1320
Bpu1102I	GCTNAGC	1 cut(s)	1278
Bpu14I	TTCGAA	1 cut(s)	102
BpuEI	CTTGAG	2 cut(s)	1021, 1208
BpuMI	CCSGG	9 cut(s)	23, 118, 226, 487, 505, 512, 587, 820, 821
BsaAI	YACGTR	1 cut(s)	1334
BsaBI	GATNNNNATC	2 cut(s)	521, 882
BsaHI	GRCGYC	1 cut(s)	144
BsaJI	CCNNGG	4 cut(s)	224, 372, 572, 819
BsaWI	WCCGGW	3 cut(s)	450, 798, 1094
Bse118I	RCCGGY	2 cut(s)	450, 748
Bse1I	ACTGG	2 cut(s)	852, 962
Bse3DI	GCAATG	1 cut(s)	788
Bse8I	GATNNNNATC	2 cut(s)	521, 882
BseBI	CCWGG	1 cut(s)	1303
BseDI	CCNNGG	4 cut(s)	224, 372, 572, 819
BseGI	GGATG	6 cut(s)	783, 990, 1093, 1159, 1290, 1311
BseJI	GATNNNNATC	2 cut(s)	521, 882
BseMI	GCAATG	1 cut(s)	788
BseMII	CTCAG	3 cut(s)	35, 329, 1269
BseNI	ACTGG	2 cut(s)	852, 962
BseRI	GAGGAG	3 cut(s)	317, 320, 641
BseSI	GKGCMC	3 cut(s)	467, 583, 1128
BseX3I	CGGCCG	1 cut(s)	369
BseXI	GCAGC	2 cut(s)	1126, 1321
Bsh1236I	CGCG	2 cut(s)	374, 574
Bsh1285I	CGRYCG	1 cut(s)	372
BshFI	GGCC	8 cut(s)	68, 211, 222, 371, 407, 581, 905, 961
BshTI	ACCGGT	1 cut(s)	450
BsiEI	CGRYCG	1 cut(s)	372
BsiHKAI	GWGCWC	2 cut(s)	762, 1128
BsiHKCI	CYCGRG	4 cut(s)	254, 286, 819, 1082
BslFI	GGGAC	1 cut(s)	949
BsmAI	GTCTC	2 cut(s)	36, 289
BsmFI	GGGAC	1 cut(s)	949
BsmI	GAATGC	4 cut(s)	270, 469, 1251, 1385
BsnI	GGCC	8 cut(s)	68, 211, 222, 371, 407, 581, 905, 961
BsoBI	CYCGRG	4 cut(s)	254, 286, 819, 1082
Bsp119I	TTCGAA	1 cut(s)	102
Bsp120I	GGGCCC	1 cut(s)	579
Bsp1286I	GDGCHC	4 cut(s)	467, 583, 762, 1128
Bsp143I	GATC	4 cut(s)	522, 595, 883, 1451
Bsp1720I	GCTNAGC	1 cut(s)	1278
BspANI	GGCC	8 cut(s)	68, 211, 222, 371, 407, 581, 905, 961
BspCNI	CTCAG	3 cut(s)	36, 328, 1270
BspFNI	CGCG	2 cut(s)	374, 574
BspHI	TCATGA	1 cut(s)	651
BspLI	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
BspMAI	CTGCAG	1 cut(s)	666
BspPI	GGATC	2 cut(s)	517, 590
BspT104I	TTCGAA	1 cut(s)	102
BsrBI	CCGCTC	2 cut(s)	259, 1282
BsrDI	GCAATG	1 cut(s)	788
BsrFI	RCCGGY	2 cut(s)	450, 748
BsrI	ACTGG	2 cut(s)	852, 962
BssAI	RCCGGY	2 cut(s)	450, 748
BssECI	CCNNGG	4 cut(s)	224, 372, 572, 819
BssMI	GATC	4 cut(s)	522, 595, 883, 1451
BssNI	GRCGYC	1 cut(s)	144
Bst2UI	CCWGG	1 cut(s)	1303
Bst4CI	ACNGT	4 cut(s)	75, 559, 838, 1101
Bst6I	CTCTTC	1 cut(s)	1224
BstACI	GRCGYC	1 cut(s)	144
BstBAI	YACGTR	1 cut(s)	1334
BstBI	TTCGAA	1 cut(s)	102
BstC8I	GCNNGC	6 cut(s)	239, 467, 583, 812, 1009, 1264
BstDEI	CTNAG	4 cut(s)	44, 315, 1200, 1278
BstDSI	CCRYGG	2 cut(s)	372, 572
BstEII	GGTNACC	1 cut(s)	946
BstF5I	GGATG	6 cut(s)	783, 990, 1093, 1159, 1290, 1311
BstFNI	CGCG	2 cut(s)	374, 574
BstH2I	RGCGCY	1 cut(s)	797
BstHHI	GCGC	1 cut(s)	796
BstKTI	GATC	4 cut(s)	525, 598, 886, 1454
BstMAI	GTCTC	2 cut(s)	36, 289
BstMBI	GATC	4 cut(s)	522, 595, 883, 1451
BstMCI	CGRYCG	1 cut(s)	372
BstMWI	GCNNNNNNNGC	5 cut(s)	49, 265, 377, 547, 1389
BstNI	CCWGG	1 cut(s)	1303
BstNSI	RCATGY	3 cut(s)	1049, 1235, 1387
BstPI	GGTNACC	1 cut(s)	946
BstSFI	CTRYAG	1 cut(s)	662
BstSLI	GKGCMC	3 cut(s)	467, 583, 1128
BstUI	CGCG	2 cut(s)	374, 574
BstV1I	GCAGC	2 cut(s)	1126, 1321
BstV2I	GAAGAC	2 cut(s)	317, 1320
BstX2I	RGATCY	1 cut(s)	1451
BstXI	CCANNNNNNTGG	1 cut(s)	76
BstYI	RGATCY	1 cut(s)	1451
BstZI	CGGCCG	1 cut(s)	369
BsuRI	GGCC	8 cut(s)	68, 211, 222, 371, 407, 581, 905, 961
BtgI	CCRYGG	2 cut(s)	372, 572
BtsCI	GGATG	6 cut(s)	783, 990, 1093, 1159, 1290, 1311
BtsIMutI	CAGTG	2 cut(s)	71, 213
Cac8I	GCNNGC	6 cut(s)	239, 467, 583, 812, 1009, 1264
CciI	TCATGA	1 cut(s)	651
CciNI	GCGGCCGC	1 cut(s)	369
CfoI	GCGC	1 cut(s)	796
Cfr10I	RCCGGY	2 cut(s)	450, 748
Cfr13I	GGNCC	8 cut(s)	210, 221, 405, 453, 489, 579, 580, 691
Cfr42I	CCGCGG	2 cut(s)	375, 575
Cfr9I	CCCGGG	1 cut(s)	819
CpoI	CGGWCCG	1 cut(s)	453
CseI	GACGC	3 cut(s)	18, 152, 547
Csp6I	GTAC	3 cut(s)	567, 964, 992
CspAI	ACCGGT	1 cut(s)	450
CspI	CGGWCCG	1 cut(s)	453
CviAII	CATG	6 cut(s)	64, 381, 652, 1046, 1232, 1384
CviQI	GTAC	3 cut(s)	567, 964, 992
DdeI	CTNAG	4 cut(s)	44, 315, 1200, 1278
DpnI	GATC	4 cut(s)	524, 597, 885, 1453
DpnII	GATC	4 cut(s)	522, 595, 883, 1451
DrdI	GACNNNNNNGTC	1 cut(s)	544
DseDI	GACNNNNNNGTC	1 cut(s)	544
EaeI	YGGCCR	3 cut(s)	66, 369, 959
EagI	CGGCCG	1 cut(s)	369
Eam1104I	CTCTTC	1 cut(s)	1224
EarI	CTCTTC	1 cut(s)	1224
EciI	GGCGGA	1 cut(s)	356
EclXI	CGGCCG	1 cut(s)	369
Eco24I	GRGCYC	1 cut(s)	583
Eco47I	GGWCC	3 cut(s)	453, 489, 691
Eco52I	CGGCCG	1 cut(s)	369
Eco72I	CACGTG	1 cut(s)	1334
Eco88I	CYCGRG	4 cut(s)	254, 286, 819, 1082
Eco91I	GGTNACC	1 cut(s)	946
EcoO109I	RGGNCCY	1 cut(s)	691
EcoO65I	GGTNACC	1 cut(s)	946
EcoRII	CCWGG	1 cut(s)	1301
EcoT22I	ATGCAT	2 cut(s)	1185, 1385
EcoT38I	GRGCYC	1 cut(s)	583
FaeI	CATG	6 cut(s)	67, 384, 655, 1049, 1235, 1387
FaqI	GGGAC	1 cut(s)	949
FatI	CATG	6 cut(s)	63, 380, 651, 1045, 1231, 1383
FauI	CCCGC	4 cut(s)	261, 474, 590, 702
FauNDI	CATATG	1 cut(s)	908
FblI	GTMKAC	1 cut(s)	1042
Fnu4HI	GCNGC	5 cut(s)	369, 372, 572, 1140, 1310
FokI	GGATG	6 cut(s)	790, 997, 1100, 1146, 1297, 1318
FriOI	GRGCYC	1 cut(s)	583
Fsp4HI	GCNGC	5 cut(s)	369, 372, 572, 1140, 1310
FspBI	CTAG	1 cut(s)	1164
GlaI	GCGC	1 cut(s)	795
GluI	GCNGC	5 cut(s)	369, 372, 572, 1140, 1310
HaeII	RGCGCY	1 cut(s)	797
HaeIII	GGCC	8 cut(s)	68, 211, 222, 371, 407, 581, 905, 961
HgaI	GACGC	3 cut(s)	18, 152, 547
HhaI	GCGC	1 cut(s)	796
Hin1I	GRCGYC	1 cut(s)	144
Hin1II	CATG	6 cut(s)	67, 384, 655, 1049, 1235, 1387
Hin6I	GCGC	1 cut(s)	794
HinP1I	GCGC	1 cut(s)	794
HincII	GTYRAC	1 cut(s)	192
HindII	GTYRAC	1 cut(s)	192
HindIII	AAGCTT	1 cut(s)	198
HinfI	GANTC	8 cut(s)	125, 167, 272, 282, 313, 416, 868, 896
HpaI	GTTAAC	1 cut(s)	192
Hpy166II	GTNNAC	4 cut(s)	82, 192, 1043, 1126
Hpy188I	TCNGA	7 cut(s)	249, 445, 457, 493, 600, 720, 892
Hpy188III	TCNNGA	6 cut(s)	180, 652, 872, 1082, 1187, 1464
Hpy8I	GTNNAC	4 cut(s)	82, 192, 1043, 1126
Hpy99I	CGWCG	3 cut(s)	12, 146, 175
HpyAV	CCTTC	4 cut(s)	610, 937, 1010, 1201
HpyCH4III	ACNGT	4 cut(s)	75, 559, 838, 1101
HpyCH4IV	ACGT	1 cut(s)	1333
HpyCH4V	TGCA	7 cut(s)	664, 709, 781, 1126, 1183, 1309, 1383
HpyF10VI	GCNNNNNNNGC	5 cut(s)	49, 265, 377, 547, 1389
HpyF3I	CTNAG	4 cut(s)	44, 315, 1200, 1278
HpySE526I	ACGT	1 cut(s)	1333
Hsp92I	GRCGYC	1 cut(s)	144
Hsp92II	CATG	6 cut(s)	67, 384, 655, 1049, 1235, 1387
HspAI	GCGC	1 cut(s)	794
KspAI	GTTAAC	1 cut(s)	192
KspI	CCGCGG	2 cut(s)	375, 575
Kzo9I	GATC	4 cut(s)	522, 595, 883, 1451
LmnI	GCTCC	3 cut(s)	801, 1177, 1216
Lsp1109I	GCAGC	2 cut(s)	1126, 1321
LweI	GCATC	5 cut(s)	768, 1078, 1170, 1192, 1296
MaeI	CTAG	1 cut(s)	1164
MaeII	ACGT	1 cut(s)	1333
MaeIII	GTNAC	5 cut(s)	481, 740, 946, 1048, 1195
MalI	GATC	4 cut(s)	524, 597, 885, 1453
MbiI	CCGCTC	2 cut(s)	259, 1282
MboI	GATC	4 cut(s)	522, 595, 883, 1451
MboII	GAAGA	8 cut(s)	322, 406, 613, 685, 842, 905, 1211, 1320
MflI	RGATCY	1 cut(s)	1451
MhlI	GDGCHC	4 cut(s)	467, 583, 762, 1128
MlsI	TGGCCA	1 cut(s)	68
MluCI	AATT	4 cut(s)	426, 431, 494, 1437
MluNI	TGGCCA	1 cut(s)	68
MlyI	GAGTC	5 cut(s)	161, 281, 291, 307, 425
MmeI	TCCRAC	1 cut(s)	480
Mox20I	TGGCCA	1 cut(s)	68
Mph1103I	ATGCAT	2 cut(s)	1185, 1385
MscI	TGGCCA	1 cut(s)	68
MseI	TTAA	4 cut(s)	191, 725, 1409, 1436
MslI	CAYNNNNRTG	2 cut(s)	557, 1029
Msp20I	TGGCCA	1 cut(s)	68
MspA1I	CMGCKG	2 cut(s)	374, 574
Mva1269I	GAATGC	4 cut(s)	270, 469, 1251, 1385
MvaI	CCWGG	1 cut(s)	1303
MvnI	CGCG	2 cut(s)	374, 574
MwoI	GCNNNNNNNGC	5 cut(s)	49, 265, 377, 547, 1389
NciI	CCSGG	9 cut(s)	23, 118, 226, 487, 505, 512, 587, 820, 821
NdeI	CATATG	1 cut(s)	908
NdeII	GATC	4 cut(s)	522, 595, 883, 1451
NlaIII	CATG	6 cut(s)	67, 384, 655, 1049, 1235, 1387
NlaIV	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
NmeAIII	GCCGAG	3 cut(s)	19, 433, 723
NmuCI	GTSAC	2 cut(s)	946, 1048
NotI	GCGGCCGC	1 cut(s)	369
NsiI	ATGCAT	2 cut(s)	1185, 1385
NspI	RCATGY	3 cut(s)	1049, 1235, 1387
NspV	TTCGAA	1 cut(s)	102
PaeR7I	CTCGAG	1 cut(s)	1082
PagI	TCATGA	1 cut(s)	651
PciI	ACATGT	1 cut(s)	1045
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PctI	GAATGC	4 cut(s)	270, 469, 1251, 1385
PfeI	GAWTC	3 cut(s)	125, 868, 896
PflMI	CCANNNNNTGG	2 cut(s)	912, 957
PfoI	TCCNGGA	1 cut(s)	1301
PinAI	ACCGGT	1 cut(s)	450
PkrI	GCNGC	5 cut(s)	370, 373, 573, 1141, 1311
PleI	GAGTC	5 cut(s)	161, 280, 290, 307, 424
PmaCI	CACGTG	1 cut(s)	1334
PmlI	CACGTG	1 cut(s)	1334
PpsI	GAGTC	5 cut(s)	161, 280, 290, 307, 424
Ppu21I	YACGTR	1 cut(s)	1334
PpuMI	RGGWCCY	1 cut(s)	691
PscI	ACATGT	1 cut(s)	1045
PsiI	TTATAA	1 cut(s)	1422
Psp5II	RGGWCCY	1 cut(s)	691
Psp6I	CCWGG	1 cut(s)	1301
PspCI	CACGTG	1 cut(s)	1334
PspEI	GGTNACC	1 cut(s)	946
PspGI	CCWGG	1 cut(s)	1301
PspN4I	GGNNCC	6 cut(s)	223, 490, 509, 581, 693, 1212
PspOMI	GGGCCC	1 cut(s)	579
PspPI	GGNCC	8 cut(s)	210, 221, 405, 453, 489, 579, 580, 691
PspPPI	RGGWCCY	1 cut(s)	691
PstI	CTGCAG	1 cut(s)	666
PsuI	RGATCY	1 cut(s)	1451
RsaI	GTAC	3 cut(s)	568, 965, 993
RsaNI	GTAC	3 cut(s)	567, 964, 992
RseI	CAYNNNNRTG	2 cut(s)	557, 1029
Rsr2I	CGGWCCG	1 cut(s)	453
RsrII	CGGWCCG	1 cut(s)	453
SacII	CCGCGG	2 cut(s)	375, 575
SaqAI	TTAA	4 cut(s)	191, 725, 1409, 1436
SatI	GCNGC	5 cut(s)	369, 372, 572, 1140, 1310
Sau3AI	GATC	4 cut(s)	522, 595, 883, 1451
Sau96I	GGNCC	8 cut(s)	210, 221, 405, 453, 489, 579, 580, 691
SchI	GAGTC	5 cut(s)	161, 281, 291, 307, 425
SduI	GDGCHC	4 cut(s)	467, 583, 762, 1128
SfaNI	GCATC	5 cut(s)	768, 1078, 1170, 1192, 1296
SfcI	CTRYAG	1 cut(s)	662
Sfr274I	CTCGAG	1 cut(s)	1082
Sfr303I	CCGCGG	2 cut(s)	375, 575
SfuI	TTCGAA	1 cut(s)	102
SgrBI	CCGCGG	2 cut(s)	375, 575
SinI	GGWCC	3 cut(s)	453, 489, 691
SlaI	CTCGAG	1 cut(s)	1082
SmaI	CCCGGG	1 cut(s)	821
SmiMI	CAYNNNNRTG	2 cut(s)	557, 1029
SmlI	CTYRAG	3 cut(s)	1000, 1082, 1187
SmoI	CTYRAG	3 cut(s)	1000, 1082, 1187
Sse9I	AATT	4 cut(s)	426, 431, 494, 1437
SspI	AATATT	1 cut(s)	705
SspMI	CTAG	1 cut(s)	1164
TaaI	ACNGT	4 cut(s)	75, 559, 838, 1101
TaiI	ACGT	1 cut(s)	1336
TaqI	TCGA	7 cut(s)	18, 102, 153, 232, 300, 1083, 1236
TasI	AATT	4 cut(s)	426, 431, 494, 1437
TatI	WGTACW	1 cut(s)	991
TauI	GCSGC	3 cut(s)	371, 374, 574
TfiI	GAWTC	3 cut(s)	125, 868, 896
Tru1I	TTAA	4 cut(s)	191, 725, 1409, 1436
Tru9I	TTAA	4 cut(s)	191, 725, 1409, 1436
TscAI	CASTG	2 cut(s)	78, 220
TseFI	GTSAC	2 cut(s)	946, 1048
TseI	GCWGC	2 cut(s)	1139, 1309
Tsp45I	GTSAC	2 cut(s)	946, 1048
TspDTI	ATGAA	4 cut(s)	17, 640, 843, 1234
TspGWI	ACGGA	2 cut(s)	209, 339
TspMI	CCCGGG	1 cut(s)	819
TspRI	CASTG	2 cut(s)	78, 220
Van91I	CCANNNNNTGG	2 cut(s)	912, 957
VneI	GTGCAC	1 cut(s)	1124
VpaK11BI	GGWCC	3 cut(s)	453, 489, 691
XapI	RAATTY	1 cut(s)	494
XceI	RCATGY	3 cut(s)	1049, 1235, 1387
XhoI	CTCGAG	1 cut(s)	1082
XmaI	CCCGGG	1 cut(s)	819
XmiI	GTMKAC	1 cut(s)	1042
XspI	CTAG	1 cut(s)	1164
Zsp2I	ATGCAT	2 cut(s)	1185, 1385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.