RchiOBHm_Chr5g0055801

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0008659
Physical Location & Seq
Reverse (-)
59159884 .. 59163563
3680 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33275

Sequence Viewer

Length: 1899 bp
ATGCCTCCTGCTAGGAAGGTTTCTGAGTTTTTCAGAGAAGGCAATGACTGGTTTTGCAAAGCCGGATTGCCGAGTGATATTACTGTTGTGGTGGACGGTGTAAGGTTCCATCTTCATAAGTTTCCTCTCATATCAAAATGTGGGAAGATAGCACGTTTATATGAAGAGTCCGAAAGGAAACATGAGAAGATTTTCACTACAGTTCTTGAGGAATTCCCTGGTGGCTCTGACATGTTCCTGCTCGCAGCTAAATTCTGCTATGGTACGCGGGTGGAATTGACTTCAAGAAACATAGTAATGGTGTACTGTGCAGCAGACTACCTTGAAATGATAGATGAGTTTGGAGAAGAAAACTTACTCTCAAAGTCGGAGAGTTTTTTCTATAAGAATATACTTCACAACTGGAAAGACTGTATCTTGGCTCTTCAAAGTTCTGAGCCTGTTCTCCAAAGGGCAGAAAAACTTCACATAATAAACAAATGTGTAAATGCTTTATCGGTGATGGTTTGTACTGATCCTAGTTTATTTGGGTGGCCCATGATGATGTATGGTAGCTTACAGAGTCCTGGTGGAAGCATCCTATGGAATGGAATTAATACTGGAGCAAGGATTCGAAGCTCTGAGTCTGATTGGTGGTTTGAAGACATCTCATACCTCAGTGTGAGTTTGTTTGAGAGACTCATCAAGGCAATGGAAACGAAGGGCATAAGACCCGAAAACATTGTAGGTGCTGTAATGCACTATACCAGAAAATACCTACCTGGCCTGGGCAGATGGCAGGGTGGACAACATAGTATACCCAGGACAGTTACAAGTTTTAGTTTTACACCCATTGCCCTTGATCAAAGGGTAGTTTTAGAAAGCATTGAGAAACTTCTTCCCCAAAAGAAGGGTAAATCATTTTGCCGGTTTTTGCTCGGACTTCTTCGTGTTGCATTAATATTGGGAGCCAGTCAAACCTGCAAGGACTCTTTAGAGAAGAGAATAGGCAGACAACTGGAATTTGCAACTTTAGATGGTCTTCTGATTCCTACATATTCAGATGCTGAGACATTGTATGATATTGACACTGTTCAACGGATAATCCAACATTTTATGTCATCAGAATCGAAGGTTACACCATTTTCTCCAGCATCAGTTGAACCGGAAACATCTCCATCATCGGGACCATTAAGGTTAGTGGCAAAGCTGATAGATAGCTACATTGCGGAGGTTGCTTCAGATGTTGCTCTAAAGCCTGGAAAGATACGCTCTCTTGCAGAGGCTCTTCCAGATTCTTCAAGAACTTTGCATGATGGGCTGTATCGGTCACTTGATATATACTTCAAGGCGCATCCTTGGCTCACAGATAAGGAGAAGGAAGAACTTTGCAACATCATTGACTTCCAGAAACTCTCTATTGATGCATGTGCCCATGCATCCCAAAATGAAAGGTTGCCGCTTAGAGTTGTTCTTCAAGTCCTGTTCTTTGAGCAGATGCATTTGAGAACTGCTCTAGCTGGTCATCTGAATGTCTTGGAAACAGAAAGTGCCCCTACAGGTCCTGTTAATGTCCAAGCTGAGATGGCTGGCCAGATTATACAGAGGGATGGGTGGGTGACTATGGTGCGTGAGAACCGGGTTTTAAAGGTGGATATGGACAAGATGAGATCTAGAGTTGGTGAGCTCGAACAAGAATTTAGTAAAATAAAGCAAGAGATGAAAAAGGTGTCCAAATCACATAGTTCCCTCAGTTCGCCTCGTGTGGTTGCCAGGAGAATTGGGTGCAATCTTCTTTCACGACCTTCAGATGATAAACCAGTGACCATTGGAAGTACCGCGCCCTCCCCAAGAGCATCAGTTGAGCAGGCACGTTTTTCCTGCCATTCTAGACACAAGAAAAGTTTTTCATTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

632

Amino Acids

71.25

Weight (kDa)

8.53

Isoelectric Point (pI)

52.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 210 - 470 3.8e-89 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 968
AccI GTMKAC 1 cut(s) 796
AccII CGCG 2 cut(s) 268, 1820
AciI CCGC 4 cut(s) 268, 1208, 1439, 1818
AclWI GGATC 1 cut(s) 509
AcoI YGGCCR 1 cut(s) 1570
AcsI RAATTY 4 cut(s) 212, 251, 1001, 1676
AcuI CTGAAG 2 cut(s) 1203, 1770
AfaI GTAC 4 cut(s) 265, 305, 511, 1816
AfiI CCNNNNNNNGG 3 cut(s) 767, 889, 1163
AflIII ACRYGT 1 cut(s) 231
AgsI TTSAA 9 cut(s) 285, 326, 428, 641, 1076, 1142, 1281, 1327, 1457
AjnI CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
AluBI AGCT 8 cut(s) 248, 555, 618, 1189, 1200, 1499, 1559, 1666
AluI AGCT 8 cut(s) 248, 555, 618, 1189, 1200, 1499, 1559, 1666
Alw21I GWGCWC 1 cut(s) 1668
Alw26I GTCTC 2 cut(s) 670, 1043
AlwI GGATC 1 cut(s) 509
AlwNI CAGNNNCTG 2 cut(s) 1046, 1544
AoxI GGCC 3 cut(s) 533, 763, 1570
ApeKI GCWGC 2 cut(s) 245, 311
ApoI RAATTY 4 cut(s) 212, 251, 1001, 1676
AseI ATTAAT 2 cut(s) 594, 938
Asp700I GAANNNNTTC 2 cut(s) 191, 462
AspLEI GCGC 2 cut(s) 1333, 1822
AspS9I GGNCC 3 cut(s) 534, 1166, 1541
AsuC2I CCSGG 1 cut(s) 1619
AsuHPI GGTGA 3 cut(s) 511, 1609, 1673
AsuII TTCGAA 1 cut(s) 613
AvaII GGWCC 2 cut(s) 1166, 1541
BaeGI GKGCMC 2 cut(s) 1414, 1534
BaeI ACNNNNGTAYC 2 cut(s) 255, 288
BalI TGGCCA 1 cut(s) 1572
BanII GRGCYC 1 cut(s) 1668
BarI GAAGNNNNNNTAC 2 cut(s) 339, 371
BauI CACGAG 1 cut(s) 1740
BbsI GAAGAC 2 cut(s) 648, 1013
Bbv12I GWGCWC 1 cut(s) 1668
BbvI GCAGC 2 cut(s) 257, 323
BccI CCATC 8 cut(s) 117, 496, 768, 1010, 1165, 1289, 1558, 1583
BciT130I CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
BclI TGATCA 1 cut(s) 841
BcnI CCSGG 1 cut(s) 1619
BcoDI GTCTC 2 cut(s) 670, 1043
BfaI CTAG 5 cut(s) 12, 519, 1496, 1653, 1869
BfmI CTRYAG 2 cut(s) 198, 1536
BfuAI ACCTGC 1 cut(s) 968
BglII AGATCT 1 cut(s) 1649
BisI GCNGC 3 cut(s) 246, 312, 1439
BlsI GCNGC 3 cut(s) 247, 313, 1440
Bme1390I CCNGG 8 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753
Bme18I GGWCC 2 cut(s) 1166, 1541
BmgT120I GGNCC 3 cut(s) 534, 1166, 1541
BmiI GGNNCC 3 cut(s) 107, 949, 1167
BmrFI CCNGG 8 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753
BmsI GCATC 8 cut(s) 585, 1033, 1142, 1342, 1393, 1427, 1467, 1844
BpiI GAAGAC 2 cut(s) 648, 1013
BplI GAGNNNNNCTC 2 cut(s) 1477, 1509
BpmI CTGGAG 2 cut(s) 621, 1113
Bpu14I TTCGAA 1 cut(s) 613
BpuEI CTTGAG 1 cut(s) 227
BpuMI CCSGG 1 cut(s) 1619
BsaJI CCNNGG 4 cut(s) 217, 766, 800, 1337
BsaWI WCCGGW 1 cut(s) 1144
Bsc4I CCNNNNNNNGG 3 cut(s) 767, 889, 1163
Bse118I RCCGGY 1 cut(s) 906
Bse1I ACTGG 6 cut(s) 53, 407, 604, 951, 1002, 1799
Bse3DI GCAATG 4 cut(s) 49, 696, 831, 1203
BseBI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
BseDI CCNNGG 4 cut(s) 217, 766, 800, 1337
BseGI GGATG 4 cut(s) 576, 1333, 1418, 1594
BseLI CCNNNNNNNGG 3 cut(s) 767, 889, 1163
BseMI GCAATG 4 cut(s) 49, 696, 831, 1203
BseMII CTCAG 7 cut(s) 15, 426, 612, 670, 1038, 1551, 1744
BseNI ACTGG 6 cut(s) 53, 407, 604, 951, 1002, 1799
BseSI GKGCMC 2 cut(s) 1414, 1534
BseXI GCAGC 2 cut(s) 257, 323
BsgI GTGCAG 1 cut(s) 330
Bsh1236I CGCG 2 cut(s) 268, 1820
BshFI GGCC 3 cut(s) 535, 765, 1572
BsiHKAI GWGCWC 1 cut(s) 1668
BsiSI CCGG 4 cut(s) 63, 907, 1145, 1618
BslFI GGGAC 1 cut(s) 1179
BslI CCNNNNNNNGG 3 cut(s) 767, 889, 1163
BsmAI GTCTC 2 cut(s) 670, 1043
BsmFI GGGAC 1 cut(s) 1179
BsnI GGCC 3 cut(s) 535, 765, 1572
Bsp119I TTCGAA 1 cut(s) 613
Bsp1286I GDGCHC 3 cut(s) 1414, 1534, 1668
Bsp143I GATC 3 cut(s) 514, 841, 1649
BspACI CCGC 4 cut(s) 268, 1208, 1439, 1818
BspANI GGCC 3 cut(s) 535, 765, 1572
BspCNI CTCAG 7 cut(s) 16, 427, 613, 669, 1039, 1552, 1743
BspFNI CGCG 2 cut(s) 268, 1820
BspLI GGNNCC 3 cut(s) 107, 949, 1167
BspMI ACCTGC 1 cut(s) 968
BspPI GGATC 1 cut(s) 509
BspQI GCTCTTC 2 cut(s) 429, 1272
BspT104I TTCGAA 1 cut(s) 613
BsrDI GCAATG 4 cut(s) 49, 696, 831, 1203
BsrFI RCCGGY 1 cut(s) 906
BsrI ACTGG 6 cut(s) 53, 407, 604, 951, 1002, 1799
BssAI RCCGGY 1 cut(s) 906
BssECI CCNNGG 4 cut(s) 217, 766, 800, 1337
BssMI GATC 3 cut(s) 514, 841, 1649
BssNAI GTATAC 1 cut(s) 797
BssSI CACGAG 1 cut(s) 1740
BssT1I CCWWGG 1 cut(s) 1337
Bst1107I GTATAC 1 cut(s) 797
Bst2BI CACGAG 1 cut(s) 1740
Bst2UI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
Bst4CI ACNGT 7 cut(s) 85, 98, 202, 308, 413, 808, 1072
Bst6I CTCTTC 4 cut(s) 159, 429, 974, 1272
BstBI TTCGAA 1 cut(s) 613
BstC8I GCNNGC 3 cut(s) 243, 1570, 1848
BstDEI CTNAG 8 cut(s) 24, 435, 621, 656, 1047, 1442, 1560, 1730
BstF5I GGATG 4 cut(s) 576, 1333, 1418, 1594
BstFNI CGCG 2 cut(s) 268, 1820
BstHHI GCGC 2 cut(s) 1333, 1822
BstKTI GATC 3 cut(s) 517, 844, 1652
BstMAI GTCTC 2 cut(s) 670, 1043
BstMBI GATC 3 cut(s) 514, 841, 1649
BstMWI GCNNNNNNNGC 4 cut(s) 1214, 1297, 1339, 1565
BstNI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
BstNSI RCATGY 2 cut(s) 235, 1410
BstSCI CCNGG 8 cut(s) 217, 565, 760, 765, 800, 1237, 1617, 1751
BstSFI CTRYAG 2 cut(s) 198, 1536
BstSLI GKGCMC 2 cut(s) 1414, 1534
BstUI CGCG 2 cut(s) 268, 1820
BstV1I GCAGC 2 cut(s) 257, 323
BstV2I GAAGAC 2 cut(s) 648, 1013
BstX2I RGATCY 1 cut(s) 1649
BstYI RGATCY 1 cut(s) 1649
BstZ17I GTATAC 1 cut(s) 797
BsuRI GGCC 3 cut(s) 535, 765, 1572
BtsCI GGATG 4 cut(s) 576, 1333, 1418, 1594
BtsIMutI CAGTG 3 cut(s) 664, 1068, 1806
BveI ACCTGC 1 cut(s) 968
Cac8I GCNNGC 3 cut(s) 243, 1570, 1848
CaiI CAGNNNCTG 2 cut(s) 1046, 1544
CfoI GCGC 2 cut(s) 1333, 1822
Cfr10I RCCGGY 1 cut(s) 906
Cfr13I GGNCC 3 cut(s) 534, 1166, 1541
Csp6I GTAC 4 cut(s) 264, 304, 510, 1815
CviAII CATG 6 cut(s) 182, 232, 538, 1292, 1407, 1415
CviQI GTAC 4 cut(s) 264, 304, 510, 1815
DdeI CTNAG 8 cut(s) 24, 435, 621, 656, 1047, 1442, 1560, 1730
DpnI GATC 3 cut(s) 516, 843, 1651
DpnII GATC 3 cut(s) 514, 841, 1649
DraI TTTAAA 1 cut(s) 1626
EaeI YGGCCR 1 cut(s) 1570
Eam1104I CTCTTC 4 cut(s) 159, 429, 974, 1272
EarI CTCTTC 4 cut(s) 159, 429, 974, 1272
Ecl136II GAGCTC 1 cut(s) 1666
Eco130I CCWWGG 1 cut(s) 1337
Eco24I GRGCYC 1 cut(s) 1668
Eco47I GGWCC 2 cut(s) 1166, 1541
Eco53kI GAGCTC 1 cut(s) 1666
Eco57I CTGAAG 2 cut(s) 1203, 1770
EcoICRI GAGCTC 1 cut(s) 1666
EcoO109I RGGNCCY 1 cut(s) 1541
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
EcoT14I CCWWGG 1 cut(s) 1337
EcoT22I ATGCAT 3 cut(s) 1408, 1420, 1482
EcoT38I GRGCYC 1 cut(s) 1668
ErhI CCWWGG 1 cut(s) 1337
FaeI CATG 6 cut(s) 185, 235, 541, 1295, 1410, 1418
FaqI GGGAC 1 cut(s) 1179
FatI CATG 6 cut(s) 181, 231, 537, 1291, 1406, 1414
FauI CCCGC 1 cut(s) 261
FbaI TGATCA 1 cut(s) 841
FblI GTMKAC 1 cut(s) 796
Fnu4HI GCNGC 3 cut(s) 246, 312, 1439
FokI GGATG 4 cut(s) 563, 1320, 1405, 1601
FriOI GRGCYC 1 cut(s) 1668
Fsp4HI GCNGC 3 cut(s) 246, 312, 1439
FspBI CTAG 5 cut(s) 12, 519, 1496, 1653, 1869
GlaI GCGC 2 cut(s) 1332, 1821
GluI GCNGC 3 cut(s) 246, 312, 1439
GsuI CTGGAG 2 cut(s) 621, 1113
HaeIII GGCC 3 cut(s) 535, 765, 1572
HapII CCGG 4 cut(s) 63, 907, 1145, 1618
HhaI GCGC 2 cut(s) 1333, 1822
Hin1II CATG 6 cut(s) 185, 235, 541, 1295, 1410, 1418
Hin6I GCGC 2 cut(s) 1331, 1820
HinP1I GCGC 2 cut(s) 1331, 1820
HinfI GANTC 9 cut(s) 167, 562, 610, 623, 678, 968, 1027, 1106, 1274
HpaII CCGG 4 cut(s) 63, 907, 1145, 1618
HphI GGTGA 3 cut(s) 511, 1609, 1673
Hpy166II GTNNAC 4 cut(s) 94, 304, 785, 797
Hpy188III TCNNGA 9 cut(s) 206, 285, 1164, 1271, 1281, 1387, 1653, 1779, 1869
Hpy8I GTNNAC 4 cut(s) 94, 304, 785, 797
HpyAV CCTTC 7 cut(s) 10, 32, 694, 883, 1105, 1351, 1794
HpyCH4III ACNGT 7 cut(s) 85, 98, 202, 308, 413, 808, 1072
HpyCH4IV ACGT 2 cut(s) 154, 1852
HpyF10VI GCNNNNNNNGC 4 cut(s) 1214, 1297, 1339, 1565
HpyF3I CTNAG 8 cut(s) 24, 435, 621, 656, 1047, 1442, 1560, 1730
HpySE526I ACGT 2 cut(s) 154, 1852
Hsp92II CATG 6 cut(s) 185, 235, 541, 1295, 1410, 1418
HspAI GCGC 2 cut(s) 1331, 1820
Ksp22I TGATCA 1 cut(s) 841
Kzo9I GATC 3 cut(s) 514, 841, 1649
LguI GCTCTTC 2 cut(s) 429, 1272
LmnI GCTCC 2 cut(s) 602, 947
Lsp1109I GCAGC 2 cut(s) 257, 323
LweI GCATC 8 cut(s) 585, 1033, 1142, 1342, 1393, 1427, 1467, 1844
MaeI CTAG 5 cut(s) 12, 519, 1496, 1653, 1869
MaeII ACGT 2 cut(s) 154, 1852
MaeIII GTNAC 5 cut(s) 808, 1114, 1308, 1597, 1801
MalI GATC 3 cut(s) 516, 843, 1651
MboI GATC 3 cut(s) 514, 841, 1649
MflI RGATCY 1 cut(s) 1649
MhlI GDGCHC 3 cut(s) 1414, 1534, 1668
MlsI TGGCCA 1 cut(s) 1572
MluCI AATT 7 cut(s) 212, 251, 275, 591, 1001, 1676, 1758
MluNI TGGCCA 1 cut(s) 1572
MlyI GAGTC 5 cut(s) 176, 571, 632, 672, 962
MmeI TCCRAC 2 cut(s) 348, 1111
Mox20I TGGCCA 1 cut(s) 1572
Mph1103I ATGCAT 3 cut(s) 1408, 1420, 1482
MroXI GAANNNNTTC 2 cut(s) 191, 462
MscI TGGCCA 1 cut(s) 1572
MseI TTAA 5 cut(s) 594, 938, 1172, 1548, 1625
MslI CAYNNNNRTG 3 cut(s) 296, 542, 1509
Msp20I TGGCCA 1 cut(s) 1572
MspI CCGG 4 cut(s) 63, 907, 1145, 1618
MspR9I CCNGG 8 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753
MvaI CCWGG 7 cut(s) 219, 567, 762, 767, 802, 1239, 1753
MvnI CGCG 2 cut(s) 268, 1820
MwoI GCNNNNNNNGC 4 cut(s) 1214, 1297, 1339, 1565
NciI CCSGG 1 cut(s) 1619
NdeII GATC 3 cut(s) 514, 841, 1649
NlaIII CATG 6 cut(s) 185, 235, 541, 1295, 1410, 1418
NlaIV GGNNCC 3 cut(s) 107, 949, 1167
NmeAIII GCCGAG 1 cut(s) 96
NmuCI GTSAC 3 cut(s) 1308, 1597, 1801
NsiI ATGCAT 3 cut(s) 1408, 1420, 1482
NspI RCATGY 2 cut(s) 235, 1410
NspV TTCGAA 1 cut(s) 613
PciI ACATGT 1 cut(s) 231
PciSI GCTCTTC 2 cut(s) 429, 1272
PdmI GAANNNNTTC 2 cut(s) 191, 462
PfeI GAWTC 4 cut(s) 610, 1027, 1106, 1274
PkrI GCNGC 3 cut(s) 247, 313, 1440
PleI GAGTC 5 cut(s) 175, 570, 631, 672, 962
PpsI GAGTC 5 cut(s) 175, 570, 631, 672, 962
PpuMI RGGWCCY 1 cut(s) 1541
PscI ACATGT 1 cut(s) 231
PshBI ATTAAT 2 cut(s) 594, 938
Psp124BI GAGCTC 1 cut(s) 1668
Psp5II RGGWCCY 1 cut(s) 1541
Psp6I CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
PspGI CCWGG 7 cut(s) 217, 565, 760, 765, 800, 1237, 1751
PspN4I GGNNCC 3 cut(s) 107, 949, 1167
PspPI GGNCC 3 cut(s) 534, 1166, 1541
PspPPI RGGWCCY 1 cut(s) 1541
PstNI CAGNNNCTG 2 cut(s) 1046, 1544
PsuI RGATCY 1 cut(s) 1649
RsaI GTAC 4 cut(s) 265, 305, 511, 1816
RsaNI GTAC 4 cut(s) 264, 304, 510, 1815
RseI CAYNNNNRTG 3 cut(s) 296, 542, 1509
SacI GAGCTC 1 cut(s) 1668
SapI GCTCTTC 2 cut(s) 429, 1272
SaqAI TTAA 5 cut(s) 594, 938, 1172, 1548, 1625
SatI GCNGC 3 cut(s) 246, 312, 1439
Sau3AI GATC 3 cut(s) 514, 841, 1649
Sau96I GGNCC 3 cut(s) 534, 1166, 1541
SchI GAGTC 5 cut(s) 176, 571, 632, 672, 962
ScrFI CCNGG 8 cut(s) 219, 567, 762, 767, 802, 1239, 1619, 1753
SduI GDGCHC 3 cut(s) 1414, 1534, 1668
SfaNI GCATC 8 cut(s) 585, 1033, 1142, 1342, 1393, 1427, 1467, 1844
SfcI CTRYAG 2 cut(s) 198, 1536
SfuI TTCGAA 1 cut(s) 613
SinI GGWCC 2 cut(s) 1166, 1541
SmiMI CAYNNNNRTG 3 cut(s) 296, 542, 1509
SmlI CTYRAG 1 cut(s) 206
SmoI CTYRAG 1 cut(s) 206
Sse9I AATT 7 cut(s) 212, 251, 275, 591, 1001, 1676, 1758
SsiI CCGC 4 cut(s) 268, 1208, 1439, 1818
SspI AATATT 1 cut(s) 942
SspMI CTAG 5 cut(s) 12, 519, 1496, 1653, 1869
SstI GAGCTC 1 cut(s) 1668
StyD4I CCNGG 8 cut(s) 217, 565, 760, 765, 800, 1237, 1617, 1751
StyI CCWWGG 1 cut(s) 1337
TaaI ACNGT 7 cut(s) 85, 98, 202, 308, 413, 808, 1072
TaiI ACGT 2 cut(s) 157, 1855
TaqI TCGA 3 cut(s) 613, 1109, 1668
TaqII GACCGA 1 cut(s) 1296
TasI AATT 7 cut(s) 212, 251, 275, 591, 1001, 1676, 1758
TatI WGTACW 2 cut(s) 303, 509
TauI GCSGC 1 cut(s) 1441
TfiI GAWTC 4 cut(s) 610, 1027, 1106, 1274
Tru1I TTAA 5 cut(s) 594, 938, 1172, 1548, 1625
Tru9I TTAA 5 cut(s) 594, 938, 1172, 1548, 1625
TscAI CASTG 3 cut(s) 664, 1075, 1806
TseFI GTSAC 3 cut(s) 1308, 1597, 1801
TseI GCWGC 2 cut(s) 245, 311
Tsp45I GTSAC 3 cut(s) 1308, 1597, 1801
TspDTI ATGAA 5 cut(s) 104, 177, 1443, 1715, 1878
TspGWI ACGGA 1 cut(s) 1093
TspRI CASTG 3 cut(s) 664, 1075, 1806
VpaK11BI GGWCC 2 cut(s) 1166, 1541
VspI ATTAAT 2 cut(s) 594, 938
XapI RAATTY 4 cut(s) 212, 251, 1001, 1676
XbaI TCTAGA 2 cut(s) 1652, 1868
XceI RCATGY 2 cut(s) 235, 1410
XmiI GTMKAC 1 cut(s) 796
XmnI GAANNNNTTC 2 cut(s) 191, 462
XspI CTAG 5 cut(s) 12, 519, 1496, 1653, 1869
Zsp2I ATGCAT 3 cut(s) 1408, 1420, 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.