RLG00000035010

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0008659
Physical Location & Seq
Reverse (-)
59112337 .. 59115800
3464 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035010

Sequence Viewer

Length: 2178 bp
ATGATTGTTCAGACAAAAAGCCCGAGACAAAACCAAATCCTCATTATAACACCCAAAACTCCTTTCCCTCCTCGGCCGGCAACACCACTCATTCCCCCTATGCTTCCATCCCATGTCCTTGTTCCCTCACACGCCGGCCTACCCTTCTTCTTCTGGCGCTTATTTTTTCGATATGAATTTGCTTGGCTCACACACTTTGGGGGTCGTTTTCTGCGTCGTGATCTGTGCACACTTTTGTGGAACCCACTCAAGCTAGCTCCTCTACTCCTCTCTTCAGCTATGCCTCCTGCTAGGAAGGTTTCTGAGTTTTTCAGAGAAGGCAATGACTGGTTTTGCAAAGCCGGATTGCCGAGTGATATTACTGTTGTGGTGGACGGTGTAAGCTTCCATCTTCATAAGTTTCCTCTCATATCAAAATGTGGGAAGATAGCACGTTTATATGAAGAGTCTGAAAGGAAACATGAGAAGATTTTCACTACAGTTCTTGAGGAATTCCCTGGTGGCCCTGACATGTTCCTGATCGCAGCTAAATTCTGCTATGGTATGCGGGTGGAATTGACTTCAAGAAACATAGTAATGGTGTACTGTGCAGCGGACTACCTTGAAATGATGGATGAGTTTGGAGAAGAAAACTTACTCTCAAAGTCGGAGAGTTTTTTCTATAAGAATATACTTCACAACTGGAAAGACTGTATCTTGGCTCTTCAAAGTTCTGAGCCTGTTCTCCAAAGGGCAGAAAAACTTCACATAATAAACAAATGTGTAAATGCTTTATCGGTGATGGTTTGTACTGATCCTAGTTTATTTGGGTGGCCCATGATGATGTATGGTAGCTTACAGAGTCCTGGTGGAAGCATCCTATGGAATGGAATTAATACTGGAGCAAGGATTCGAAGCTCAGAGTCTGATTGGTGGTTTGAAGACATCTCGTACCTCAGTGTGAGTTTGTTTGAGAGACTTATCAAGGCAATGGAAACAAAGGGTATAAGACCCGAAAACATTGTAGGTGCTGTAATGCACTATACCAGAAAATACCTACCCGGCCTTGGCAGATGGCAGGGTGGACAACATGGTATACCCAGGACAGTTACAAGTTTTAGTTTTACACCCATTGCCCTAGATCAAAGGGTAGTTTTAGAAAGCATTGAGAAACTTCTTCCCCAAAAGAAGGGTAAATCATTTTGCCGGTTTTTGCTCGGACTTCTTCGTGTTGCATTAATTTTGGGAGCCAGTCAAACCTGCAGGGACTCTTTGGAGAAGAGAATAGGAAGGCAACTGGAATTTGCAACTTTAGATGGTCTTCTGATTCCTACATATTCAGATGCTGAGACATTGTATGACATTGACACTGTTCAACGGATAATCCAACATTTCATGTCATCAGAATTGAAGGTTACACCATTTTCTCCAGCATCAGTTGAACTGGAAACATCTCCATCATCAGGACCATTCAGGTTAGTTGCAAAGCTGACAGATAGCTACATTGCTGAGGTTGCTTCAGATGTTAATTTAAAGCCTGGAAAGATACGCTCTCTTGCAGAGGCTCTTCCAGATTCTTCAAGAAGTTTGCATGATGGGTTGTACCGGTCACTTGATATATACTTCAAGGCACATCCTTGGCTCTCAGATAAGGAGAAGGAAGAACTATGCAACATCATTGACTTCCAGAAACTCTCTATTGATGCATGTGCCCATGCATCCCAAAATGAAAGGTTGCCACTTAGAGTTGTTCTTCAAGTCCTGTTCTTTGAGCAGATGCATTTGAGAACTGCTCTAGCTGGTCATCTGAATGTCTTGGAAACAGAAAGTGCCCCTACAGGTCCTGTTAATGTCCAAGCTGACATGGCTGGCCAGATTATACAGAGGGATGGGTGGGTGACTATGGTGCGTGAGAACCGGGTTTTAAAGGTGGATATGGACAAGATGAGATCTAGAGTTGGTGAGCTCGAAGAAGAATTTAGTAAGATAAAGCAAGAGATGAAAAAGGTGTCCAAATCACATAGTTCCCTCAGTTCGCCTCGTGTGGTTGCCAGGAGAATTGGGTGCAGTCTTCTTTCACGACCTTCAGATGCTAAACCAGAGACCATTGGAGGTACTGGGCCCTCTCCAAGAGCATCAGTTGAGCAGGGACGTTTTTCCTGCCATTCTAGACACAAGAAAAGTTTTTCATTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

726

Amino Acids

81.97

Weight (kDa)

8.93

Isoelectric Point (pI)

52.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 303 - 563 1.5e-88 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 47
Acc36I ACCTGC 1 cut(s) 1247
AccI GTMKAC 1 cut(s) 1075
AciI CCGC 2 cut(s) 547, 593
AclWI GGATC 1 cut(s) 788
AcoI YGGCCR 2 cut(s) 74, 1849
AcsI RAATTY 5 cut(s) 176, 491, 530, 1280, 1955
AcuI CTGAAG 3 cut(s) 258, 1482, 2049
AfaI GTAC 5 cut(s) 584, 790, 932, 1583, 2095
AfiI CCNNNNNNNGG 3 cut(s) 1046, 1168, 1442
AflIII ACRYGT 1 cut(s) 510
AgeI ACCGGT 1 cut(s) 1584
AjnI CCWGG 5 cut(s) 496, 844, 1079, 1516, 2030
AjuI GAANNNNNNNTTGG 2 cut(s) 47, 79
AleI CACNNNNGTG 1 cut(s) 235
Alw21I GWGCWC 2 cut(s) 230, 1947
Alw26I GTCTC 4 cut(s) 19, 949, 1322, 2075
Alw44I GTGCAC 1 cut(s) 226
AlwI GGATC 1 cut(s) 788
AlwNI CAGNNNCTG 3 cut(s) 905, 1325, 1823
Ama87I CYCGRG 1 cut(s) 22
AoxI GGCC 7 cut(s) 74, 136, 502, 812, 1042, 1849, 2099
ApaI GGGCCC 1 cut(s) 2103
ApaLI GTGCAC 1 cut(s) 226
ApeKI GCWGC 2 cut(s) 524, 590
ApoI RAATTY 5 cut(s) 176, 491, 530, 1280, 1955
AseI ATTAAT 2 cut(s) 873, 1217
AsiGI ACCGGT 1 cut(s) 1584
Asp700I GAANNNNTTC 2 cut(s) 470, 741
AspLEI GCGC 1 cut(s) 159
AspS9I GGNCC 6 cut(s) 503, 813, 1445, 1820, 2099, 2100
AsuC2I CCSGG 2 cut(s) 1041, 1898
AsuHPI GGTGA 3 cut(s) 790, 1888, 1952
AsuII TTCGAA 1 cut(s) 892
AsuNHI GCTAGC 1 cut(s) 253
AvaI CYCGRG 1 cut(s) 22
AvaII GGWCC 2 cut(s) 1445, 1820
BaeGI GKGCMC 4 cut(s) 230, 1693, 1813, 2103
BalI TGGCCA 1 cut(s) 1851
BanII GRGCYC 2 cut(s) 1947, 2103
BarI GAAGNNNNNNTAC 2 cut(s) 618, 650
BauI CACGAG 1 cut(s) 2019
BbsI GAAGAC 3 cut(s) 927, 1292, 2042
Bbv12I GWGCWC 2 cut(s) 230, 1947
BbvCI CCTCAGC 1 cut(s) 1488
BbvI GCAGC 2 cut(s) 536, 602
BccI CCATC 9 cut(s) 115, 396, 604, 775, 1047, 1289, 1444, 1568, 1862
BciT130I CCWGG 5 cut(s) 498, 846, 1081, 1518, 2032
BcnI CCSGG 2 cut(s) 1041, 1898
BcoDI GTCTC 4 cut(s) 19, 949, 1322, 2075
BfaI CTAG 7 cut(s) 254, 291, 798, 1118, 1775, 1932, 2148
BfmI CTRYAG 3 cut(s) 477, 1240, 1815
BfoI RGCGCY 1 cut(s) 160
BfuAI ACCTGC 1 cut(s) 1247
BglII AGATCT 1 cut(s) 1928
BisI GCNGC 2 cut(s) 525, 591
BlsI GCNGC 2 cut(s) 526, 592
Bme1390I CCNGG 7 cut(s) 498, 846, 1041, 1081, 1518, 1898, 2032
Bme18I GGWCC 2 cut(s) 1445, 1820
BmeT110I CYCGRG 1 cut(s) 22
BmgT120I GGNCC 6 cut(s) 503, 813, 1445, 1820, 2099, 2100
BmiI GGNNCC 3 cut(s) 242, 1228, 2101
BmrFI CCNGG 7 cut(s) 498, 846, 1041, 1081, 1518, 1898, 2032
BmrI ACTGGG 1 cut(s) 2106
BmsI GCATC 8 cut(s) 864, 1312, 1421, 1672, 1706, 1746, 2059, 2123
BmtI GCTAGC 1 cut(s) 257
BmuI ACTGGG 1 cut(s) 2106
BpiI GAAGAC 3 cut(s) 927, 1292, 2042
BplI GAGNNNNNCTC 2 cut(s) 1756, 1788
BpmI CTGGAG 2 cut(s) 900, 1392
Bpu10I CCTNAGC 1 cut(s) 1488
Bpu14I TTCGAA 1 cut(s) 892
BpuEI CTTGAG 2 cut(s) 233, 506
BpuMI CCSGG 2 cut(s) 1041, 1898
BsaI GGTCTC 1 cut(s) 2075
BsaJI CCNNGG 5 cut(s) 71, 496, 1045, 1079, 1616
BsaWI WCCGGW 1 cut(s) 1584
Bsc4I CCNNNNNNNGG 3 cut(s) 1046, 1168, 1442
Bse118I RCCGGY 4 cut(s) 76, 134, 1185, 1584
Bse1I ACTGG 7 cut(s) 332, 686, 883, 1230, 1281, 1428, 2101
Bse3DI GCAATG 4 cut(s) 328, 975, 1110, 1482
BseBI CCWGG 5 cut(s) 498, 846, 1081, 1518, 2032
BseDI CCNNGG 5 cut(s) 71, 496, 1045, 1079, 1616
BseGI GGATG 6 cut(s) 107, 619, 855, 1612, 1697, 1873
BseLI CCNNNNNNNGG 3 cut(s) 1046, 1168, 1442
BseMI GCAATG 4 cut(s) 328, 975, 1110, 1482
BseMII CTCAG 8 cut(s) 294, 705, 912, 949, 1317, 1479, 1638, 2023
BseNI ACTGG 7 cut(s) 332, 686, 883, 1230, 1281, 1428, 2101
BseRI GAGGAG 3 cut(s) 60, 249, 257
BseSI GKGCMC 4 cut(s) 230, 1693, 1813, 2103
BseX3I CGGCCG 1 cut(s) 74
BseXI GCAGC 2 cut(s) 536, 602
BsgI GTGCAG 2 cut(s) 609, 2065
Bsh1285I CGRYCG 1 cut(s) 77
BshFI GGCC 7 cut(s) 76, 138, 504, 814, 1044, 1851, 2101
BshTI ACCGGT 1 cut(s) 1584
BsiEI CGRYCG 1 cut(s) 77
BsiHKAI GWGCWC 2 cut(s) 230, 1947
BsiHKCI CYCGRG 1 cut(s) 22
BsiSI CCGG 7 cut(s) 77, 135, 342, 1041, 1186, 1585, 1897
BslFI GGGAC 2 cut(s) 1259, 2142
BslI CCNNNNNNNGG 3 cut(s) 1046, 1168, 1442
BsmAI GTCTC 4 cut(s) 19, 949, 1322, 2075
BsmFI GGGAC 2 cut(s) 1259, 2142
BsnI GGCC 7 cut(s) 76, 138, 504, 814, 1044, 1851, 2101
Bso31I GGTCTC 1 cut(s) 2075
BsoBI CYCGRG 1 cut(s) 22
Bsp119I TTCGAA 1 cut(s) 892
Bsp120I GGGCCC 1 cut(s) 2099
Bsp1286I GDGCHC 5 cut(s) 230, 1693, 1813, 1947, 2103
Bsp143I GATC 5 cut(s) 220, 519, 793, 1120, 1928
BspACI CCGC 2 cut(s) 547, 593
BspANI GGCC 7 cut(s) 76, 138, 504, 814, 1044, 1851, 2101
BspCNI CTCAG 8 cut(s) 295, 706, 911, 948, 1318, 1480, 1637, 2022
BspLI GGNNCC 3 cut(s) 242, 1228, 2101
BspMAI CTGCAG 1 cut(s) 1244
BspMI ACCTGC 1 cut(s) 1247
BspOI GCTAGC 1 cut(s) 257
BspPI GGATC 1 cut(s) 788
BspQI GCTCTTC 2 cut(s) 708, 1551
BspT104I TTCGAA 1 cut(s) 892
BspTNI GGTCTC 1 cut(s) 2075
BsrDI GCAATG 4 cut(s) 328, 975, 1110, 1482
BsrFI RCCGGY 4 cut(s) 76, 134, 1185, 1584
BsrI ACTGG 7 cut(s) 332, 686, 883, 1230, 1281, 1428, 2101
BssAI RCCGGY 4 cut(s) 76, 134, 1185, 1584
BssECI CCNNGG 5 cut(s) 71, 496, 1045, 1079, 1616
BssMI GATC 5 cut(s) 220, 519, 793, 1120, 1928
BssNAI GTATAC 1 cut(s) 1076
BssSI CACGAG 1 cut(s) 2019
BssT1I CCWWGG 2 cut(s) 1045, 1616
Bst1107I GTATAC 1 cut(s) 1076
Bst2BI CACGAG 1 cut(s) 2019
Bst2UI CCWGG 5 cut(s) 498, 846, 1081, 1518, 2032
Bst4CI ACNGT 7 cut(s) 364, 377, 481, 587, 692, 1087, 1351
Bst6I CTCTTC 5 cut(s) 277, 438, 708, 1253, 1551
BstBI TTCGAA 1 cut(s) 892
BstC8I GCNNGC 4 cut(s) 78, 136, 255, 1849
BstDEI CTNAG 9 cut(s) 303, 714, 898, 935, 1326, 1488, 1624, 1721, 2009
BstF5I GGATG 6 cut(s) 107, 619, 855, 1612, 1697, 1873
BstH2I RGCGCY 1 cut(s) 160
BstHHI GCGC 1 cut(s) 159
BstKTI GATC 5 cut(s) 223, 522, 796, 1123, 1931
BstMAI GTCTC 4 cut(s) 19, 949, 1322, 2075
BstMBI GATC 5 cut(s) 220, 519, 793, 1120, 1928
BstMCI CGRYCG 1 cut(s) 77
BstMWI GCNNNNNNNGC 2 cut(s) 1493, 1844
BstNI CCWGG 5 cut(s) 498, 846, 1081, 1518, 2032
BstNSI RCATGY 2 cut(s) 514, 1689
BstSCI CCNGG 7 cut(s) 496, 844, 1039, 1079, 1516, 1896, 2030
BstSFI CTRYAG 3 cut(s) 477, 1240, 1815
BstSLI GKGCMC 4 cut(s) 230, 1693, 1813, 2103
BstV1I GCAGC 2 cut(s) 536, 602
BstV2I GAAGAC 3 cut(s) 927, 1292, 2042
BstX2I RGATCY 1 cut(s) 1928
BstYI RGATCY 1 cut(s) 1928
BstZ17I GTATAC 1 cut(s) 1076
BstZI CGGCCG 1 cut(s) 74
BsuRI GGCC 7 cut(s) 76, 138, 504, 814, 1044, 1851, 2101
BtsCI GGATG 6 cut(s) 107, 619, 855, 1612, 1697, 1873
BtsIMutI CAGTG 2 cut(s) 943, 1347
BveI ACCTGC 1 cut(s) 1247
Cac8I GCNNGC 4 cut(s) 78, 136, 255, 1849
CaiI CAGNNNCTG 3 cut(s) 905, 1325, 1823
CfoI GCGC 1 cut(s) 159
Cfr10I RCCGGY 4 cut(s) 76, 134, 1185, 1584
Cfr13I GGNCC 6 cut(s) 503, 813, 1445, 1820, 2099, 2100
CseI GACGC 1 cut(s) 203
Csp6I GTAC 5 cut(s) 583, 789, 931, 1582, 2094
CspAI ACCGGT 1 cut(s) 1584
CviQI GTAC 5 cut(s) 583, 789, 931, 1582, 2094
DdeI CTNAG 9 cut(s) 303, 714, 898, 935, 1326, 1488, 1624, 1721, 2009
DpnI GATC 5 cut(s) 222, 521, 795, 1122, 1930
DpnII GATC 5 cut(s) 220, 519, 793, 1120, 1928
DraI TTTAAA 2 cut(s) 1512, 1905
EaeI YGGCCR 2 cut(s) 74, 1849
EagI CGGCCG 1 cut(s) 74
Eam1104I CTCTTC 5 cut(s) 277, 438, 708, 1253, 1551
EarI CTCTTC 5 cut(s) 277, 438, 708, 1253, 1551
Ecl136II GAGCTC 1 cut(s) 1945
EclXI CGGCCG 1 cut(s) 74
Eco130I CCWWGG 2 cut(s) 1045, 1616
Eco24I GRGCYC 2 cut(s) 1947, 2103
Eco31I GGTCTC 1 cut(s) 2075
Eco47I GGWCC 2 cut(s) 1445, 1820
Eco52I CGGCCG 1 cut(s) 74
Eco53kI GAGCTC 1 cut(s) 1945
Eco57I CTGAAG 3 cut(s) 258, 1482, 2049
Eco88I CYCGRG 1 cut(s) 22
EcoICRI GAGCTC 1 cut(s) 1945
EcoO109I RGGNCCY 2 cut(s) 1820, 2100
EcoRI GAATTC 1 cut(s) 491
EcoRII CCWGG 5 cut(s) 496, 844, 1079, 1516, 2030
EcoT14I CCWWGG 2 cut(s) 1045, 1616
EcoT22I ATGCAT 3 cut(s) 1687, 1699, 1761
EcoT38I GRGCYC 2 cut(s) 1947, 2103
ErhI CCWWGG 2 cut(s) 1045, 1616
FaqI GGGAC 2 cut(s) 1259, 2142
FauI CCCGC 1 cut(s) 540
FblI GTMKAC 1 cut(s) 1075
Fnu4HI GCNGC 2 cut(s) 525, 591
FokI GGATG 6 cut(s) 94, 626, 842, 1599, 1684, 1880
FriOI GRGCYC 2 cut(s) 1947, 2103
Fsp4HI GCNGC 2 cut(s) 525, 591
FspBI CTAG 7 cut(s) 254, 291, 798, 1118, 1775, 1932, 2148
GlaI GCGC 1 cut(s) 158
GluI GCNGC 2 cut(s) 525, 591
GsuI CTGGAG 2 cut(s) 900, 1392
HaeII RGCGCY 1 cut(s) 160
HaeIII GGCC 7 cut(s) 76, 138, 504, 814, 1044, 1851, 2101
HapII CCGG 7 cut(s) 77, 135, 342, 1041, 1186, 1585, 1897
HgaI GACGC 1 cut(s) 203
HhaI GCGC 1 cut(s) 159
Hin6I GCGC 1 cut(s) 157
HinP1I GCGC 1 cut(s) 157
HindIII AAGCTT 1 cut(s) 382
HinfI GANTC 7 cut(s) 446, 841, 889, 902, 1247, 1306, 1553
HpaII CCGG 7 cut(s) 77, 135, 342, 1041, 1186, 1585, 1897
HphI GGTGA 3 cut(s) 790, 1888, 1952
Hpy166II GTNNAC 5 cut(s) 228, 373, 583, 1064, 1076
Hpy8I GTNNAC 5 cut(s) 228, 373, 583, 1064, 1076
Hpy99I CGWCG 1 cut(s) 219
HpyAV CCTTC 8 cut(s) 154, 289, 311, 1162, 1263, 1384, 1630, 2073
HpyCH4III ACNGT 7 cut(s) 364, 377, 481, 587, 692, 1087, 1351
HpyCH4IV ACGT 2 cut(s) 433, 2131
HpyF10VI GCNNNNNNNGC 2 cut(s) 1493, 1844
HpyF3I CTNAG 9 cut(s) 303, 714, 898, 935, 1326, 1488, 1624, 1721, 2009
HpySE526I ACGT 2 cut(s) 433, 2131
HspAI GCGC 1 cut(s) 157
KroI GCCGGC 2 cut(s) 76, 134
KroNI GCCGGC 2 cut(s) 78, 136
Kzo9I GATC 5 cut(s) 220, 519, 793, 1120, 1928
LguI GCTCTTC 2 cut(s) 708, 1551
LmnI GCTCC 3 cut(s) 262, 881, 1226
Lsp1109I GCAGC 2 cut(s) 536, 602
LweI GCATC 8 cut(s) 864, 1312, 1421, 1672, 1706, 1746, 2059, 2123
MaeI CTAG 7 cut(s) 254, 291, 798, 1118, 1775, 1932, 2148
MaeII ACGT 2 cut(s) 433, 2131
MaeIII GTNAC 4 cut(s) 1087, 1393, 1587, 1876
MalI GATC 5 cut(s) 222, 521, 795, 1122, 1930
MboI GATC 5 cut(s) 220, 519, 793, 1120, 1928
MflI RGATCY 1 cut(s) 1928
MhlI GDGCHC 5 cut(s) 230, 1693, 1813, 1947, 2103
MlsI TGGCCA 1 cut(s) 1851
MluNI TGGCCA 1 cut(s) 1851
MlyI GAGTC 4 cut(s) 455, 850, 911, 1241
MmeI TCCRAC 2 cut(s) 627, 1390
Mox20I TGGCCA 1 cut(s) 1851
Mph1103I ATGCAT 3 cut(s) 1687, 1699, 1761
MroNI GCCGGC 2 cut(s) 76, 134
MroXI GAANNNNTTC 2 cut(s) 470, 741
MscI TGGCCA 1 cut(s) 1851
MseI TTAA 6 cut(s) 873, 1217, 1506, 1511, 1827, 1904
MslI CAYNNNNRTG 4 cut(s) 235, 575, 821, 1788
Msp20I TGGCCA 1 cut(s) 1851
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 7 cut(s) 77, 135, 342, 1041, 1186, 1585, 1897
MspR9I CCNGG 7 cut(s) 498, 846, 1041, 1081, 1518, 1898, 2032
MvaI CCWGG 5 cut(s) 498, 846, 1081, 1518, 2032
MwoI GCNNNNNNNGC 2 cut(s) 1493, 1844
NaeI GCCGGC 2 cut(s) 78, 136
NciI CCSGG 2 cut(s) 1041, 1898
NdeII GATC 5 cut(s) 220, 519, 793, 1120, 1928
NgoMIV GCCGGC 2 cut(s) 76, 134
NheI GCTAGC 1 cut(s) 253
NlaIV GGNNCC 3 cut(s) 242, 1228, 2101
NmeAIII GCCGAG 2 cut(s) 52, 375
NmuCI GTSAC 2 cut(s) 1587, 1876
NsiI ATGCAT 3 cut(s) 1687, 1699, 1761
NspI RCATGY 2 cut(s) 514, 1689
NspV TTCGAA 1 cut(s) 892
OliI CACNNNNGTG 1 cut(s) 235
PciI ACATGT 1 cut(s) 510
PciSI GCTCTTC 2 cut(s) 708, 1551
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PdiI GCCGGC 2 cut(s) 78, 136
PdmI GAANNNNTTC 2 cut(s) 470, 741
PfeI GAWTC 3 cut(s) 889, 1306, 1553
PinAI ACCGGT 1 cut(s) 1584
PkrI GCNGC 2 cut(s) 526, 592
PleI GAGTC 4 cut(s) 454, 849, 910, 1241
PpsI GAGTC 4 cut(s) 454, 849, 910, 1241
PpuMI RGGWCCY 1 cut(s) 1820
PscI ACATGT 1 cut(s) 510
PshBI ATTAAT 2 cut(s) 873, 1217
PsiI TTATAA 1 cut(s) 47
Psp124BI GAGCTC 1 cut(s) 1947
Psp5II RGGWCCY 1 cut(s) 1820
Psp6I CCWGG 5 cut(s) 496, 844, 1079, 1516, 2030
PspGI CCWGG 5 cut(s) 496, 844, 1079, 1516, 2030
PspN4I GGNNCC 3 cut(s) 242, 1228, 2101
PspOMI GGGCCC 1 cut(s) 2099
PspPI GGNCC 6 cut(s) 503, 813, 1445, 1820, 2099, 2100
PspPPI RGGWCCY 1 cut(s) 1820
PstI CTGCAG 1 cut(s) 1244
PstNI CAGNNNCTG 3 cut(s) 905, 1325, 1823
PsuI RGATCY 1 cut(s) 1928
RsaI GTAC 5 cut(s) 584, 790, 932, 1583, 2095
RsaNI GTAC 5 cut(s) 583, 789, 931, 1582, 2094
RseI CAYNNNNRTG 4 cut(s) 235, 575, 821, 1788
SacI GAGCTC 1 cut(s) 1947
SapI GCTCTTC 2 cut(s) 708, 1551
SaqAI TTAA 6 cut(s) 873, 1217, 1506, 1511, 1827, 1904
SatI GCNGC 2 cut(s) 525, 591
Sau3AI GATC 5 cut(s) 220, 519, 793, 1120, 1928
Sau96I GGNCC 6 cut(s) 503, 813, 1445, 1820, 2099, 2100
SbfI CCTGCAGG 1 cut(s) 1244
SchI GAGTC 4 cut(s) 455, 850, 911, 1241
ScrFI CCNGG 7 cut(s) 498, 846, 1041, 1081, 1518, 1898, 2032
SdaI CCTGCAGG 1 cut(s) 1244
SduI GDGCHC 5 cut(s) 230, 1693, 1813, 1947, 2103
SfaNI GCATC 8 cut(s) 864, 1312, 1421, 1672, 1706, 1746, 2059, 2123
SfcI CTRYAG 3 cut(s) 477, 1240, 1815
SfuI TTCGAA 1 cut(s) 892
SinI GGWCC 2 cut(s) 1445, 1820
SmiMI CAYNNNNRTG 4 cut(s) 235, 575, 821, 1788
SmlI CTYRAG 2 cut(s) 248, 485
SmoI CTYRAG 2 cut(s) 248, 485
Sse8387I CCTGCAGG 1 cut(s) 1244
SsiI CCGC 2 cut(s) 547, 593
SspMI CTAG 7 cut(s) 254, 291, 798, 1118, 1775, 1932, 2148
SstI GAGCTC 1 cut(s) 1947
StyD4I CCNGG 7 cut(s) 496, 844, 1039, 1079, 1516, 1896, 2030
StyI CCWWGG 2 cut(s) 1045, 1616
TaaI ACNGT 7 cut(s) 364, 377, 481, 587, 692, 1087, 1351
TaiI ACGT 2 cut(s) 436, 2134
TaqI TCGA 3 cut(s) 169, 892, 1947
TatI WGTACW 2 cut(s) 582, 788
TfiI GAWTC 3 cut(s) 889, 1306, 1553
Tru1I TTAA 6 cut(s) 873, 1217, 1506, 1511, 1827, 1904
Tru9I TTAA 6 cut(s) 873, 1217, 1506, 1511, 1827, 1904
TscAI CASTG 2 cut(s) 943, 1354
TseFI GTSAC 2 cut(s) 1587, 1876
TseI GCWGC 2 cut(s) 524, 590
Tsp45I GTSAC 2 cut(s) 1587, 1876
TspDTI ATGAA 7 cut(s) 189, 383, 456, 1363, 1722, 1994, 2157
TspGWI ACGGA 1 cut(s) 1372
TspRI CASTG 2 cut(s) 943, 1354
VneI GTGCAC 1 cut(s) 226
VpaK11BI GGWCC 2 cut(s) 1445, 1820
VspI ATTAAT 2 cut(s) 873, 1217
XapI RAATTY 5 cut(s) 176, 491, 530, 1280, 1955
XbaI TCTAGA 2 cut(s) 1931, 2147
XceI RCATGY 2 cut(s) 514, 1689
XmiI GTMKAC 1 cut(s) 1075
XmnI GAANNNNTTC 2 cut(s) 470, 741
XspI CTAG 7 cut(s) 254, 291, 798, 1118, 1775, 1932, 2148
Zsp2I ATGCAT 3 cut(s) 1687, 1699, 1761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.