Serine threonine-protein kinase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0259981 RchiOBHm_Chr6g0260191 |
| rosa_multiflora | Rmu_co8333753.1_g000001 Rmu_sc0004865.1_g000001 |
| rosa_samantha | Rh6AG087400 Rh6AG108800 Rh6AG109900 Rh6BG105300 Rh6CG076100 Rh6DG072800 |
| rosa_wichuraiana | Rw6G009390 Rw6G009850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 455 |
| Acc16I | TGCGCA | 1 cut(s) | 2373 |
| Acc36I | ACCTGC | 2 cut(s) | 1406, 1995 |
| Acc65I | GGTACC | 2 cut(s) | 421, 1442 |
| AccB1I | GGYRCC | 2 cut(s) | 421, 1442 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 823 |
| AccII | CGCG | 2 cut(s) | 185, 602 |
| AciI | CCGC | 6 cut(s) | 32, 127, 183, 185, 237, 322 |
| AclWI | GGATC | 4 cut(s) | 248, 1838, 2098, 2111 |
| AcoI | YGGCCR | 1 cut(s) | 1234 |
| AcsI | RAATTY | 2 cut(s) | 1169, 1301 |
| AcuI | CTGAAG | 3 cut(s) | 1839, 2291, 2508 |
| AfaI | GTAC | 6 cut(s) | 423, 1396, 1444, 1596, 1791, 1896 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 177, 823, 2079 |
| AflII | CTTAAG | 1 cut(s) | 1204 |
| AflIII | ACRYGT | 1 cut(s) | 1747 |
| AhlI | ACTAGT | 1 cut(s) | 2047 |
| AjiI | CACGTC | 1 cut(s) | 2153 |
| AjnI | CCWGG | 1 cut(s) | 1098 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 366, 398, 2100, 2132, 2320, 2352 |
| AleI | CACNNNNGTG | 1 cut(s) | 2186 |
| AluBI | AGCT | 7 cut(s) | 117, 1066, 1541, 1768, 2020, 2124, 2279 |
| AluI | AGCT | 7 cut(s) | 117, 1066, 1541, 1768, 2020, 2124, 2279 |
| Alw21I | GWGCWC | 2 cut(s) | 49, 2438 |
| Alw26I | GTCTC | 1 cut(s) | 531 |
| AlwI | GGATC | 4 cut(s) | 248, 1838, 2098, 2111 |
| Ama87I | CYCGRG | 2 cut(s) | 407, 2413 |
| AoxI | GGCC | 5 cut(s) | 202, 1102, 1234, 1953, 2324 |
| ApoI | RAATTY | 2 cut(s) | 1169, 1301 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1727, 1759 |
| Asp718I | GGTACC | 2 cut(s) | 421, 1442 |
| AspLEI | GCGC | 3 cut(s) | 145, 170, 2374 |
| AspS9I | GGNCC | 6 cut(s) | 180, 427, 1102, 1953, 2324, 2473 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 1853 |
| AsuII | TTCGAA | 1 cut(s) | 1982 |
| AvaI | CYCGRG | 2 cut(s) | 407, 2413 |
| AvaII | GGWCC | 3 cut(s) | 180, 427, 2473 |
| BalI | TGGCCA | 1 cut(s) | 1236 |
| BamHI | GGATCC | 1 cut(s) | 2103 |
| BanI | GGYRCC | 2 cut(s) | 421, 1442 |
| BauI | CACGAG | 1 cut(s) | 1016 |
| BbsI | GAAGAC | 3 cut(s) | 97, 2419, 2559 |
| Bbv12I | GWGCWC | 2 cut(s) | 49, 2438 |
| BbvCI | CCTCAGC | 1 cut(s) | 2025 |
| BccI | CCATC | 5 cut(s) | 170, 1106, 1433, 2073, 2207 |
| BceAI | ACGGC | 2 cut(s) | 133, 217 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 233, 267, 1032, 1066 |
| BciT130I | CCWGG | 1 cut(s) | 1100 |
| BcoDI | GTCTC | 1 cut(s) | 531 |
| BcuI | ACTAGT | 1 cut(s) | 2047 |
| BfaI | CTAG | 6 cut(s) | 363, 1950, 2048, 2283, 2348, 2513 |
| BfmI | CTRYAG | 5 cut(s) | 1775, 1988, 2125, 2340, 2529 |
| BfoI | RGCGCY | 2 cut(s) | 146, 171 |
| BfrI | CTTAAG | 1 cut(s) | 1204 |
| BfuAI | ACCTGC | 2 cut(s) | 1406, 1995 |
| BglII | AGATCT | 1 cut(s) | 2491 |
| BlpI | GCTNAGC | 1 cut(s) | 155 |
| Bme1390I | CCNGG | 1 cut(s) | 1100 |
| Bme18I | GGWCC | 3 cut(s) | 180, 427, 2473 |
| BmeT110I | CYCGRG | 2 cut(s) | 407, 2413 |
| BmgBI | CACGTC | 1 cut(s) | 2153 |
| BmgT120I | GGNCC | 6 cut(s) | 180, 427, 1102, 1953, 2324, 2473 |
| BmiI | GGNNCC | 6 cut(s) | 181, 423, 574, 1444, 1731, 2105 |
| BmrFI | CCNGG | 1 cut(s) | 1100 |
| BmsI | GCATC | 4 cut(s) | 934, 1074, 1702, 1727 |
| BpiI | GAAGAC | 3 cut(s) | 97, 2419, 2559 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 287, 319 |
| BpmI | CTGGAG | 3 cut(s) | 1088, 1109, 2180 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2025 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 155 |
| Bpu14I | TTCGAA | 1 cut(s) | 1982 |
| BpuEI | CTTGAG | 2 cut(s) | 308, 328 |
| BsaBI | GATNNNNATC | 1 cut(s) | 721 |
| BsaJI | CCNNGG | 5 cut(s) | 183, 704, 1098, 1099, 2317 |
| BsaWI | WCCGGW | 1 cut(s) | 424 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1055, 1085 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 177, 823, 2079 |
| Bse118I | RCCGGY | 1 cut(s) | 1955 |
| Bse1I | ACTGG | 4 cut(s) | 835, 2163, 2188, 2448 |
| Bse3DI | GCAATG | 2 cut(s) | 1245, 2230 |
| Bse8I | GATNNNNATC | 1 cut(s) | 721 |
| BseBI | CCWGG | 1 cut(s) | 1100 |
| BseDI | CCNNGG | 5 cut(s) | 183, 704, 1098, 1099, 2317 |
| BseJI | GATNNNNATC | 1 cut(s) | 721 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 177, 823, 2079 |
| BseMI | GCAATG | 2 cut(s) | 1245, 2230 |
| BseMII | CTCAG | 4 cut(s) | 971, 1502, 2039, 2250 |
| BseNI | ACTGG | 4 cut(s) | 835, 2163, 2188, 2448 |
| BseRI | GAGGAG | 2 cut(s) | 1076, 1547 |
| BsgI | GTGCAG | 1 cut(s) | 944 |
| Bsh1236I | CGCG | 2 cut(s) | 185, 602 |
| BshFI | GGCC | 5 cut(s) | 204, 1104, 1236, 1955, 2326 |
| BshNI | GGYRCC | 2 cut(s) | 421, 1442 |
| BsiHKAI | GWGCWC | 2 cut(s) | 49, 2438 |
| BsiHKCI | CYCGRG | 2 cut(s) | 407, 2413 |
| BsiSI | CCGG | 3 cut(s) | 171, 425, 1956 |
| BslFI | GGGAC | 2 cut(s) | 193, 1948 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 177, 823, 2079 |
| BsmAI | GTCTC | 1 cut(s) | 531 |
| BsmFI | GGGAC | 2 cut(s) | 193, 1948 |
| BsmI | GAATGC | 1 cut(s) | 2361 |
| BsnI | GGCC | 5 cut(s) | 204, 1104, 1236, 1955, 2326 |
| BsoBI | CYCGRG | 2 cut(s) | 407, 2413 |
| Bsp119I | TTCGAA | 1 cut(s) | 1982 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 2438 |
| Bsp1407I | TGTACA | 1 cut(s) | 1789 |
| Bsp143I | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 155 |
| BspACI | CCGC | 6 cut(s) | 32, 127, 183, 185, 237, 322 |
| BspANI | GGCC | 5 cut(s) | 204, 1104, 1236, 1955, 2326 |
| BspCNI | CTCAG | 4 cut(s) | 970, 1503, 2038, 2249 |
| BspFNI | CGCG | 2 cut(s) | 185, 602 |
| BspHI | TCATGA | 1 cut(s) | 1924 |
| BspLI | GGNNCC | 6 cut(s) | 181, 423, 574, 1444, 1731, 2105 |
| BspMAI | CTGCAG | 4 cut(s) | 1992, 2129, 2344, 2533 |
| BspMI | ACCTGC | 2 cut(s) | 1406, 1995 |
| BspPI | GGATC | 4 cut(s) | 248, 1838, 2098, 2111 |
| BspQI | GCTCTTC | 1 cut(s) | 1557 |
| BspT104I | TTCGAA | 1 cut(s) | 1982 |
| BspT107I | GGYRCC | 2 cut(s) | 421, 1442 |
| BspTI | CTTAAG | 1 cut(s) | 1204 |
| BsrDI | GCAATG | 2 cut(s) | 1245, 2230 |
| BsrFI | RCCGGY | 1 cut(s) | 1955 |
| BsrGI | TGTACA | 1 cut(s) | 1789 |
| BsrI | ACTGG | 4 cut(s) | 835, 2163, 2188, 2448 |
| BssAI | RCCGGY | 1 cut(s) | 1955 |
| BssECI | CCNNGG | 5 cut(s) | 183, 704, 1098, 1099, 2317 |
| BssMI | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| BssSI | CACGAG | 1 cut(s) | 1016 |
| BssT1I | CCWWGG | 1 cut(s) | 2317 |
| Bst2BI | CACGAG | 1 cut(s) | 1016 |
| Bst2UI | CCWGG | 1 cut(s) | 1100 |
| Bst4CI | ACNGT | 7 cut(s) | 474, 625, 1381, 1523, 1979, 2385, 2510 |
| Bst6I | CTCTTC | 1 cut(s) | 1557 |
| BstAFI | CTTAAG | 1 cut(s) | 1204 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 44 |
| BstAUI | TGTACA | 1 cut(s) | 1789 |
| BstBI | TTCGAA | 1 cut(s) | 1982 |
| BstC8I | GCNNGC | 5 cut(s) | 206, 274, 600, 1694, 1884 |
| BstDEI | CTNAG | 5 cut(s) | 155, 957, 1511, 2025, 2236 |
| BstDSI | CCRYGG | 1 cut(s) | 183 |
| BstFNI | CGCG | 2 cut(s) | 185, 602 |
| BstH2I | RGCGCY | 2 cut(s) | 146, 171 |
| BstHHI | GCGC | 3 cut(s) | 145, 170, 2374 |
| BstKTI | GATC | 5 cut(s) | 243, 400, 1846, 2106, 2494 |
| BstMAI | GTCTC | 1 cut(s) | 531 |
| BstMBI | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| BstNI | CCWGG | 1 cut(s) | 1100 |
| BstNSI | RCATGY | 3 cut(s) | 974, 1751, 1917 |
| BstSCI | CCNGG | 1 cut(s) | 1098 |
| BstSFI | CTRYAG | 5 cut(s) | 1775, 1988, 2125, 2340, 2529 |
| BstUI | CGCG | 2 cut(s) | 185, 602 |
| BstV2I | GAAGAC | 3 cut(s) | 97, 2419, 2559 |
| BstX2I | RGATCY | 2 cut(s) | 2103, 2491 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 857, 1112 |
| BstYI | RGATCY | 2 cut(s) | 2103, 2491 |
| BsuRI | GGCC | 5 cut(s) | 204, 1104, 1236, 1955, 2326 |
| BtgI | CCRYGG | 1 cut(s) | 183 |
| BtrI | CACGTC | 1 cut(s) | 2153 |
| BtsI | GCAGTG | 3 cut(s) | 636, 828, 1997 |
| BtsIMutI | CAGTG | 6 cut(s) | 636, 828, 1043, 1997, 2181, 2455 |
| BveI | ACCTGC | 2 cut(s) | 1406, 1995 |
| Cac8I | GCNNGC | 5 cut(s) | 206, 274, 600, 1694, 1884 |
| CciI | TCATGA | 1 cut(s) | 1924 |
| CfoI | GCGC | 3 cut(s) | 145, 170, 2374 |
| Cfr10I | RCCGGY | 1 cut(s) | 1955 |
| Cfr13I | GGNCC | 6 cut(s) | 180, 427, 1102, 1953, 2324, 2473 |
| Cfr42I | CCGCGG | 1 cut(s) | 186 |
| Csp6I | GTAC | 6 cut(s) | 422, 1395, 1443, 1595, 1790, 1895 |
| CviQI | GTAC | 6 cut(s) | 422, 1395, 1443, 1595, 1790, 1895 |
| DdeI | CTNAG | 5 cut(s) | 155, 957, 1511, 2025, 2236 |
| DpnI | GATC | 5 cut(s) | 242, 399, 1845, 2105, 2493 |
| DpnII | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| DraI | TTTAAA | 2 cut(s) | 867, 1573 |
| EaeI | YGGCCR | 1 cut(s) | 1234 |
| Eam1104I | CTCTTC | 1 cut(s) | 1557 |
| EarI | CTCTTC | 1 cut(s) | 1557 |
| Eco130I | CCWWGG | 1 cut(s) | 2317 |
| Eco47I | GGWCC | 3 cut(s) | 180, 427, 2473 |
| Eco57I | CTGAAG | 3 cut(s) | 1839, 2291, 2508 |
| Eco88I | CYCGRG | 2 cut(s) | 407, 2413 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2473 |
| EcoRII | CCWGG | 1 cut(s) | 1098 |
| EcoT14I | CCWWGG | 1 cut(s) | 2317 |
| EcoT22I | ATGCAT | 2 cut(s) | 1870, 1915 |
| ErhI | CCWWGG | 1 cut(s) | 2317 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 270, 302, 2076, 2108 |
| FaqI | GGGAC | 2 cut(s) | 193, 1948 |
| FauI | CCCGC | 1 cut(s) | 230 |
| FauNDI | CATATG | 1 cut(s) | 40 |
| FspBI | CTAG | 6 cut(s) | 363, 1950, 2048, 2283, 2348, 2513 |
| FspI | TGCGCA | 1 cut(s) | 2373 |
| GlaI | GCGC | 3 cut(s) | 144, 169, 2373 |
| GsuI | CTGGAG | 3 cut(s) | 1088, 1109, 2180 |
| HaeII | RGCGCY | 2 cut(s) | 146, 171 |
| HaeIII | GGCC | 5 cut(s) | 204, 1104, 1236, 1955, 2326 |
| HapII | CCGG | 3 cut(s) | 171, 425, 1956 |
| HhaI | GCGC | 3 cut(s) | 145, 170, 2374 |
| Hin6I | GCGC | 3 cut(s) | 143, 168, 2372 |
| HinP1I | GCGC | 3 cut(s) | 143, 168, 2372 |
| HincII | GTYRAC | 3 cut(s) | 124, 1056, 2156 |
| HindII | GTYRAC | 3 cut(s) | 124, 1056, 2156 |
| HinfI | GANTC | 8 cut(s) | 310, 437, 481, 553, 661, 766, 1469, 1507 |
| HpaI | GTTAAC | 1 cut(s) | 1056 |
| HpaII | CCGG | 3 cut(s) | 171, 425, 1956 |
| HphI | GGTGA | 2 cut(s) | 28, 1853 |
| Hpy166II | GTNNAC | 8 cut(s) | 124, 636, 805, 1056, 1835, 2156, 2396, 2506 |
| Hpy8I | GTNNAC | 8 cut(s) | 124, 636, 805, 1056, 1835, 2156, 2396, 2506 |
| HpyAV | CCTTC | 5 cut(s) | 335, 585, 729, 856, 1174 |
| HpyCH4III | ACNGT | 7 cut(s) | 474, 625, 1381, 1523, 1979, 2385, 2510 |
| HpyCH4IV | ACGT | 2 cut(s) | 2152, 2367 |
| HpyF3I | CTNAG | 5 cut(s) | 155, 957, 1511, 2025, 2236 |
| HpySE526I | ACGT | 2 cut(s) | 2152, 2367 |
| HspAI | GCGC | 3 cut(s) | 143, 168, 2372 |
| KpnI | GGTACC | 2 cut(s) | 425, 1446 |
| KspAI | GTTAAC | 1 cut(s) | 1056 |
| KspI | CCGCGG | 1 cut(s) | 186 |
| Kzo9I | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| LguI | GCTCTTC | 1 cut(s) | 1557 |
| LmnI | GCTCC | 6 cut(s) | 114, 952, 1063, 1689, 1765, 2025 |
| LweI | GCATC | 4 cut(s) | 934, 1074, 1702, 1727 |
| MaeI | CTAG | 6 cut(s) | 363, 1950, 2048, 2283, 2348, 2513 |
| MaeII | ACGT | 2 cut(s) | 2152, 2367 |
| MaeIII | GTNAC | 6 cut(s) | 603, 973, 1743, 1770, 2063, 2453 |
| MalI | GATC | 5 cut(s) | 242, 399, 1845, 2105, 2493 |
| MboI | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| MflI | RGATCY | 2 cut(s) | 2103, 2491 |
| MhlI | GDGCHC | 2 cut(s) | 49, 2438 |
| MlsI | TGGCCA | 1 cut(s) | 1236 |
| MluNI | TGGCCA | 1 cut(s) | 1236 |
| MlyI | GAGTC | 2 cut(s) | 319, 1478 |
| MmeI | TCCRAC | 4 cut(s) | 397, 712, 731, 2175 |
| Mox20I | TGGCCA | 1 cut(s) | 1236 |
| Mph1103I | ATGCAT | 2 cut(s) | 1870, 1915 |
| MscI | TGGCCA | 1 cut(s) | 1236 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1110, 1929, 2186, 2204 |
| Msp20I | TGGCCA | 1 cut(s) | 1236 |
| MspA1I | CMGCKG | 1 cut(s) | 185 |
| MspCI | CTTAAG | 1 cut(s) | 1204 |
| MspI | CCGG | 3 cut(s) | 171, 425, 1956 |
| MspR9I | CCNGG | 1 cut(s) | 1100 |
| Mva1269I | GAATGC | 1 cut(s) | 2361 |
| MvaI | CCWGG | 1 cut(s) | 1100 |
| MvnI | CGCG | 2 cut(s) | 185, 602 |
| NdeI | CATATG | 1 cut(s) | 40 |
| NdeII | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| NlaIV | GGNNCC | 6 cut(s) | 181, 423, 574, 1444, 1731, 2105 |
| NmuCI | GTSAC | 1 cut(s) | 1743 |
| NsbI | TGCGCA | 1 cut(s) | 2373 |
| NsiI | ATGCAT | 2 cut(s) | 1870, 1915 |
| NspI | RCATGY | 3 cut(s) | 974, 1751, 1917 |
| NspV | TTCGAA | 1 cut(s) | 1982 |
| OliI | CACNNNNGTG | 1 cut(s) | 2186 |
| PaeR7I | CTCGAG | 1 cut(s) | 2413 |
| PagI | TCATGA | 1 cut(s) | 1924 |
| PasI | CCCWGGG | 1 cut(s) | 1099 |
| PciI | ACATGT | 1 cut(s) | 1747 |
| PciSI | GCTCTTC | 1 cut(s) | 1557 |
| PctI | GAATGC | 1 cut(s) | 2361 |
| PfeI | GAWTC | 6 cut(s) | 437, 481, 553, 661, 766, 1507 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 823 |
| PleI | GAGTC | 2 cut(s) | 318, 1477 |
| PpsI | GAGTC | 2 cut(s) | 318, 1477 |
| PpuMI | RGGWCCY | 1 cut(s) | 2473 |
| PscI | ACATGT | 1 cut(s) | 1747 |
| PsiI | TTATAA | 1 cut(s) | 455 |
| Psp5II | RGGWCCY | 1 cut(s) | 2473 |
| Psp6I | CCWGG | 1 cut(s) | 1098 |
| PspGI | CCWGG | 1 cut(s) | 1098 |
| PspN4I | GGNNCC | 6 cut(s) | 181, 423, 574, 1444, 1731, 2105 |
| PspPI | GGNCC | 6 cut(s) | 180, 427, 1102, 1953, 2324, 2473 |
| PspPPI | RGGWCCY | 1 cut(s) | 2473 |
| PspXI | VCTCGAGB | 1 cut(s) | 2413 |
| PstI | CTGCAG | 4 cut(s) | 1992, 2129, 2344, 2533 |
| PsuI | RGATCY | 2 cut(s) | 2103, 2491 |
| RsaI | GTAC | 6 cut(s) | 423, 1396, 1444, 1596, 1791, 1896 |
| RsaNI | GTAC | 6 cut(s) | 422, 1395, 1443, 1595, 1790, 1895 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1110, 1929, 2186, 2204 |
| SacII | CCGCGG | 1 cut(s) | 186 |
| SapI | GCTCTTC | 1 cut(s) | 1557 |
| Sau3AI | GATC | 5 cut(s) | 240, 397, 1843, 2103, 2491 |
| Sau96I | GGNCC | 6 cut(s) | 180, 427, 1102, 1953, 2324, 2473 |
| SchI | GAGTC | 2 cut(s) | 319, 1478 |
| ScrFI | CCNGG | 1 cut(s) | 1100 |
| SduI | GDGCHC | 2 cut(s) | 49, 2438 |
| SfaNI | GCATC | 4 cut(s) | 934, 1074, 1702, 1727 |
| SfcI | CTRYAG | 5 cut(s) | 1775, 1988, 2125, 2340, 2529 |
| Sfr274I | CTCGAG | 1 cut(s) | 2413 |
| Sfr303I | CCGCGG | 1 cut(s) | 186 |
| SfuI | TTCGAA | 1 cut(s) | 1982 |
| SgrBI | CCGCGG | 1 cut(s) | 186 |
| SinI | GGWCC | 3 cut(s) | 180, 427, 2473 |
| SlaI | CTCGAG | 1 cut(s) | 2413 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1110, 1929, 2186, 2204 |
| SmlI | CTYRAG | 4 cut(s) | 287, 307, 1204, 2413 |
| SmoI | CTYRAG | 4 cut(s) | 287, 307, 1204, 2413 |
| SpeI | ACTAGT | 1 cut(s) | 2047 |
| SsiI | CCGC | 6 cut(s) | 32, 127, 183, 185, 237, 322 |
| SspMI | CTAG | 6 cut(s) | 363, 1950, 2048, 2283, 2348, 2513 |
| StyD4I | CCNGG | 1 cut(s) | 1098 |
| StyI | CCWWGG | 1 cut(s) | 2317 |
| TaaI | ACNGT | 7 cut(s) | 474, 625, 1381, 1523, 1979, 2385, 2510 |
| TaiI | ACGT | 2 cut(s) | 2155, 2370 |
| TaqI | TCGA | 5 cut(s) | 243, 524, 1122, 1982, 2414 |
| TatI | WGTACW | 1 cut(s) | 1789 |
| TfiI | GAWTC | 6 cut(s) | 437, 481, 553, 661, 766, 1507 |
| TscAI | CASTG | 6 cut(s) | 643, 828, 1050, 1997, 2188, 2455 |
| TseFI | GTSAC | 1 cut(s) | 1743 |
| Tsp45I | GTSAC | 1 cut(s) | 1743 |
| TspRI | CASTG | 6 cut(s) | 643, 828, 1050, 1997, 2188, 2455 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 823 |
| Vha464I | CTTAAG | 1 cut(s) | 1204 |
| VpaK11BI | GGWCC | 3 cut(s) | 180, 427, 2473 |
| XapI | RAATTY | 2 cut(s) | 1169, 1301 |
| XbaI | TCTAGA | 1 cut(s) | 362 |
| XceI | RCATGY | 3 cut(s) | 974, 1751, 1917 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 107 |
| XhoI | CTCGAG | 1 cut(s) | 2413 |
| XspI | CTAG | 6 cut(s) | 363, 1950, 2048, 2283, 2348, 2513 |
| Zsp2I | ATGCAT | 2 cut(s) | 1870, 1915 |