Rh6AG087400

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
13151626 .. 13152027
402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG087400.1

Sequence Viewer

Length: 402 bp
ATGGATGTAACCTCTGATAAATTACTTAATAGTCAGTCTTTGACGAATGAACATTCAGTTGTGGTTGTTGAGAATCTGAGAAAGTACAGTCTGTTTTTTGTGAAAGCTCTCCATGTCTCTTCTCCTCTTGCAGTTAAAGTAACTGCGCTGGATTGGGTACAAAGATTTTGTGAGAATGTTATTGCTTTTAATGAGAAGTCAGACACAGAAACTCATTTCTATGAAGTGTATGGTAATGATAGAATTATTGGGAACATGCTTTACTCAATTCTGGATGCTGCATCTGATAGGGAACCAAAAGTGAGGTCACATGTTGCAATAGTATTGGAGCTGTTGCTACAGCCAAGGCTTGTACATCCTGTTTACTTTTATAGCATGGCTGATCGAAGTGGTGTTGGGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

15.12

Weight (kDa)

5.91

Isoelectric Point (pI)

26.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 3 cut(s) 86, 159, 354
AflIII ACRYGT 1 cut(s) 310
AluBI AGCT 2 cut(s) 107, 331
AluI AGCT 2 cut(s) 107, 331
Alw26I GTCTC 1 cut(s) 121
ApeKI GCWGC 1 cut(s) 278
ArsI GACNNNNNNTTYG 2 cut(s) 290, 322
AspLEI GCGC 1 cut(s) 148
BbvI GCAGC 1 cut(s) 265
BcoDI GTCTC 1 cut(s) 121
BfmI CTRYAG 1 cut(s) 338
BisI GCNGC 1 cut(s) 279
BlsI GCNGC 1 cut(s) 280
BmiI GGNNCC 1 cut(s) 294
BmsI GCATC 2 cut(s) 265, 290
BsaJI CCNNGG 1 cut(s) 344
BseDI CCNNGG 1 cut(s) 344
BseGI GGATG 3 cut(s) 10, 280, 355
BseMII CTCAG 1 cut(s) 68
BseRI GAGGAG 1 cut(s) 114
BseXI GCAGC 1 cut(s) 265
BsmAI GTCTC 1 cut(s) 121
Bsp1407I TGTACA 1 cut(s) 352
Bsp143I GATC 1 cut(s) 382
BspCNI CTCAG 1 cut(s) 69
BspLI GGNNCC 1 cut(s) 294
BsrGI TGTACA 1 cut(s) 352
BssECI CCNNGG 1 cut(s) 344
BssMI GATC 1 cut(s) 382
BssT1I CCWWGG 1 cut(s) 344
Bst4CI ACNGT 1 cut(s) 89
Bst6I CTCTTC 1 cut(s) 124
BstAUI TGTACA 1 cut(s) 352
BstDEI CTNAG 1 cut(s) 77
BstF5I GGATG 3 cut(s) 10, 280, 355
BstHHI GCGC 1 cut(s) 148
BstKTI GATC 1 cut(s) 385
BstMAI GTCTC 1 cut(s) 121
BstMBI GATC 1 cut(s) 382
BstNSI RCATGY 2 cut(s) 259, 314
BstSFI CTRYAG 1 cut(s) 338
BstV1I GCAGC 1 cut(s) 265
BtsCI GGATG 3 cut(s) 10, 280, 355
CfoI GCGC 1 cut(s) 148
Csp6I GTAC 3 cut(s) 85, 158, 353
CviAII CATG 4 cut(s) 113, 256, 311, 376
CviJI RGCY 5 cut(s) 107, 331, 343, 349, 380
CviKI_1 RGCY 5 cut(s) 107, 331, 343, 349, 380
CviQI GTAC 3 cut(s) 85, 158, 353
DdeI CTNAG 1 cut(s) 77
DpnI GATC 1 cut(s) 384
DpnII GATC 1 cut(s) 382
Eam1104I CTCTTC 1 cut(s) 124
EarI CTCTTC 1 cut(s) 124
Eco130I CCWWGG 1 cut(s) 344
EcoT14I CCWWGG 1 cut(s) 344
ErhI CCWWGG 1 cut(s) 344
FaeI CATG 4 cut(s) 116, 259, 314, 379
FaiI YATR 7 cut(s) 114, 222, 231, 257, 312, 372, 377
FatI CATG 4 cut(s) 112, 255, 310, 375
Fnu4HI GCNGC 1 cut(s) 279
FokI GGATG 3 cut(s) 17, 287, 342
Fsp4HI GCNGC 1 cut(s) 279
GlaI GCGC 1 cut(s) 147
GluI GCNGC 1 cut(s) 279
HhaI GCGC 1 cut(s) 148
Hin1II CATG 4 cut(s) 116, 259, 314, 379
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HinfI GANTC 1 cut(s) 73
Hpy166II GTNNAC 1 cut(s) 364
Hpy188I TCNGA 4 cut(s) 16, 78, 202, 286
Hpy188III TCNNGA 1 cut(s) 272
Hpy8I GTNNAC 1 cut(s) 364
HpyCH4III ACNGT 1 cut(s) 89
HpyCH4V TGCA 3 cut(s) 131, 281, 317
HpyF3I CTNAG 1 cut(s) 77
Hsp92II CATG 4 cut(s) 116, 259, 314, 379
HspAI GCGC 1 cut(s) 146
Kzo9I GATC 1 cut(s) 382
LmnI GCTCC 1 cut(s) 328
LpnPI CCDG 3 cut(s) 134, 257, 372
Lsp1109I GCAGC 1 cut(s) 265
LweI GCATC 2 cut(s) 265, 290
MaeIII GTNAC 3 cut(s) 7, 139, 306
MalI GATC 1 cut(s) 384
MboI GATC 1 cut(s) 382
MboII GAAGA 1 cut(s) 111
MluCI AATT 3 cut(s) 20, 243, 267
MnlI CCTC 3 cut(s) 22, 135, 297
MseI TTAA 3 cut(s) 27, 135, 189
MslI CAYNNNNRTG 1 cut(s) 219
NdeII GATC 1 cut(s) 382
NlaIII CATG 4 cut(s) 116, 259, 314, 379
NlaIV GGNNCC 1 cut(s) 294
NmuCI GTSAC 1 cut(s) 306
NspI RCATGY 2 cut(s) 259, 314
PciI ACATGT 1 cut(s) 310
PfeI GAWTC 1 cut(s) 73
PkrI GCNGC 1 cut(s) 280
PscI ACATGT 1 cut(s) 310
PspN4I GGNNCC 1 cut(s) 294
PsrI GAACNNNNNNTAC 2 cut(s) 245, 277
RsaI GTAC 3 cut(s) 86, 159, 354
RsaNI GTAC 3 cut(s) 85, 158, 353
RseI CAYNNNNRTG 1 cut(s) 219
SaqAI TTAA 3 cut(s) 27, 135, 189
SatI GCNGC 1 cut(s) 279
Sau3AI GATC 1 cut(s) 382
SetI ASST 4 cut(s) 14, 109, 308, 333
SfaNI GCATC 2 cut(s) 265, 290
SfcI CTRYAG 1 cut(s) 338
SmiMI CAYNNNNRTG 1 cut(s) 219
Sse9I AATT 3 cut(s) 20, 243, 267
StyI CCWWGG 1 cut(s) 344
TaaI ACNGT 1 cut(s) 89
TaqI TCGA 1 cut(s) 385
TasI AATT 3 cut(s) 20, 243, 267
TatI WGTACW 2 cut(s) 84, 352
TfiI GAWTC 1 cut(s) 73
Tru1I TTAA 3 cut(s) 27, 135, 189
Tru9I TTAA 3 cut(s) 27, 135, 189
TseFI GTSAC 1 cut(s) 306
TseI GCWGC 1 cut(s) 278
Tsp45I GTSAC 1 cut(s) 306
TspDTI ATGAA 2 cut(s) 63, 237
XceI RCATGY 2 cut(s) 259, 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.