Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0323521 RchiOBHm_Chr1g0323551 RchiOBHm_Chr1g0323691 RchiOBHm_Chr6g0265171 RchiOBHm_Chr6g0311141 |
| rosa_laevigata | RLG00000030330 |
| rosa_rugosa | Rorug01G0038300 |
| rosa_samantha | Rh1AG056000 Rh1CG056400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 10 |
| AclWI | GGATC | 1 cut(s) | 43 |
| AcsI | RAATTY | 1 cut(s) | 118 |
| AcyI | GRCGYC | 1 cut(s) | 11 |
| AdeI | CACNNNGTG | 1 cut(s) | 94 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 20 |
| AluBI | AGCT | 2 cut(s) | 7, 126 |
| AluI | AGCT | 2 cut(s) | 7, 126 |
| AlwI | GGATC | 1 cut(s) | 43 |
| ApeKI | GCWGC | 1 cut(s) | 130 |
| ApoI | RAATTY | 1 cut(s) | 118 |
| AspLEI | GCGC | 1 cut(s) | 13 |
| BaeGI | GKGCMC | 1 cut(s) | 111 |
| BanI | GGYRCC | 1 cut(s) | 10 |
| BbvI | GCAGC | 1 cut(s) | 117 |
| BfoI | RGCGCY | 1 cut(s) | 14 |
| BisI | GCNGC | 1 cut(s) | 131 |
| BlsI | GCNGC | 1 cut(s) | 132 |
| BmiI | GGNNCC | 1 cut(s) | 12 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BsaHI | GRCGYC | 1 cut(s) | 11 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 20 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseSI | GKGCMC | 1 cut(s) | 111 |
| BseXI | GCAGC | 1 cut(s) | 117 |
| BshNI | GGYRCC | 1 cut(s) | 10 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 20 |
| Bsp1286I | GDGCHC | 1 cut(s) | 111 |
| Bsp143I | GATC | 1 cut(s) | 48 |
| BspLI | GGNNCC | 1 cut(s) | 12 |
| BspPI | GGATC | 1 cut(s) | 43 |
| BspT107I | GGYRCC | 1 cut(s) | 10 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| BssMI | GATC | 1 cut(s) | 48 |
| BssNI | GRCGYC | 1 cut(s) | 11 |
| BstACI | GRCGYC | 1 cut(s) | 11 |
| BstC8I | GCNNGC | 2 cut(s) | 9, 128 |
| BstH2I | RGCGCY | 1 cut(s) | 14 |
| BstHHI | GCGC | 1 cut(s) | 13 |
| BstKTI | GATC | 1 cut(s) | 51 |
| BstMBI | GATC | 1 cut(s) | 48 |
| BstSLI | GKGCMC | 1 cut(s) | 111 |
| BstV1I | GCAGC | 1 cut(s) | 117 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 59 |
| Cac8I | GCNNGC | 2 cut(s) | 9, 128 |
| CfoI | GCGC | 1 cut(s) | 13 |
| CviJI | RGCY | 2 cut(s) | 7, 126 |
| CviKI_1 | RGCY | 2 cut(s) | 7, 126 |
| DinI | GGCGCC | 1 cut(s) | 12 |
| DpnI | GATC | 1 cut(s) | 50 |
| DpnII | GATC | 1 cut(s) | 48 |
| DraIII | CACNNNGTG | 1 cut(s) | 94 |
| EgeI | GGCGCC | 1 cut(s) | 12 |
| EheI | GGCGCC | 1 cut(s) | 12 |
| FaiI | YATR | 3 cut(s) | 27, 60, 77 |
| Fnu4HI | GCNGC | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 1 cut(s) | 131 |
| GlaI | GCGC | 1 cut(s) | 12 |
| GluI | GCNGC | 1 cut(s) | 131 |
| HaeII | RGCGCY | 1 cut(s) | 14 |
| HhaI | GCGC | 1 cut(s) | 13 |
| Hin1I | GRCGYC | 1 cut(s) | 11 |
| Hin6I | GCGC | 1 cut(s) | 11 |
| HinP1I | GCGC | 1 cut(s) | 11 |
| HpyCH4V | TGCA | 2 cut(s) | 86, 133 |
| Hsp92I | GRCGYC | 1 cut(s) | 11 |
| HspAI | GCGC | 1 cut(s) | 11 |
| KasI | GGCGCC | 1 cut(s) | 10 |
| Kzo9I | GATC | 1 cut(s) | 48 |
| LpnPI | CCDG | 1 cut(s) | 44 |
| Lsp1109I | GCAGC | 1 cut(s) | 117 |
| LweI | GCATC | 1 cut(s) | 73 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MalI | GATC | 1 cut(s) | 50 |
| MboI | GATC | 1 cut(s) | 48 |
| MhlI | GDGCHC | 1 cut(s) | 111 |
| MluCI | AATT | 2 cut(s) | 44, 118 |
| Mly113I | GGCGCC | 1 cut(s) | 11 |
| MnlI | CCTC | 2 cut(s) | 57, 151 |
| MseI | TTAA | 2 cut(s) | 35, 42 |
| NarI | GGCGCC | 1 cut(s) | 11 |
| NdeII | GATC | 1 cut(s) | 48 |
| NlaIV | GGNNCC | 1 cut(s) | 12 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| PkrI | GCNGC | 1 cut(s) | 132 |
| PluTI | GGCGCC | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 1 cut(s) | 12 |
| SaqAI | TTAA | 2 cut(s) | 35, 42 |
| SatI | GCNGC | 1 cut(s) | 131 |
| Sau3AI | GATC | 1 cut(s) | 48 |
| SduI | GDGCHC | 1 cut(s) | 111 |
| SetI | ASST | 5 cut(s) | 9, 68, 96, 128, 143 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| SfoI | GGCGCC | 1 cut(s) | 12 |
| SgeI | CNNG | 6 cut(s) | 20, 43, 103, 124, 139, 146 |
| Sse9I | AATT | 2 cut(s) | 44, 118 |
| SspDI | GGCGCC | 1 cut(s) | 10 |
| TasI | AATT | 2 cut(s) | 44, 118 |
| Tru1I | TTAA | 2 cut(s) | 35, 42 |
| Tru9I | TTAA | 2 cut(s) | 35, 42 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| TseI | GCWGC | 1 cut(s) | 130 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |
| TspDTI | ATGAA | 2 cut(s) | 17, 142 |
| XapI | RAATTY | 1 cut(s) | 118 |