RchiOBHm_Chr6g0296321

N-glycosylase DNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0015250
Physical Location & Seq
Reverse (-)
58053434 .. 58055595
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26598

Sequence Viewer

Length: 1137 bp
ATGCTCTCACTGAAACTGAGACCTCTCTCAACCATGAAGAAGAGACAGATCCCAATCCAATCGCCTCCATCCACCCCTCCAACCCCACAAACCCTAAGCTCCAAATCCAAAAGACCCAAAACCCTCAACCTCAAATCCCCCAAATGGGCCCCACTCAACCTCACCCAGTCCGAGCTCTCCCTGCCCCTCACCTTCCCCACCGGCCAAACCTTCCGGTGGAGACAAACCGGCCCTCTTCAGTACACCGGCGTTGTTGGGTCCCACCTGGTCTCCCTCCAGCACCTCCAAAACGGCGACGTTTCCTACTGCCTTCACCAATCCGCCACTTCCGAGTCCAATGCCGAGTCGGCTCTGCTCGATTTTCTCAACATGGGTATTTCCCTGGCCGGAATTTGGGAGGTTTTCTCGGCTTCCGATTCCAGGTTTGCCGAGCTCGCCACCCATTTGGGCGGCGCTAGAGTTCTCAGGCAGGACCCACTTGAGTGTTTGATTCAGTTCCTGTGTTCTTCAAATAACAACATTCAGAGAATTACCAAAATGGTGGACTTTGTGTCTTCACTGGGGAACCATTTGGGGTCTGTAGGAGGTTTTGAGTTCCATGAATTTCCATCCTTGGATCGCTTGGCAATGGTGTCGGAACAAGAGCTCAGAGAGGCCGGTTTCGGTTATAGGGCTAAGTACTTAACTGGCACTGTGAAGGCATTGCAGTCGAAACCTGGTGGAGGTGAAGAGTGGCTTTTGTCTCTTCGGAAACTTGAACTCGAAGAGGTGATTGACGCTCTTACCACATTGCCTGGAGTTGGTCCCAAGGTGGCAGCATGTATAGCTCTTTTTTCGCTTGATCAACACAATGCCATTCCTGTTGATACACACGTGTGGAAGATTGCTACAAGATACCTCATTCCTGAGCTAGCAGGGGCTCGTCTGACACCGAAGCTCTGTGGCCGCGTGGCGGAGGCATTTGTGAGTAAATATGGGAAATATGCTGGATGGGCTCAAACTCTGCTGTTTGTTGCTGAATTGCCTTCACAAAAAGCCCTCCTACCACCACATTTTTCAAATACCAAGGAGAGTAAATCTGCAAAAGGAAAGGGCCGTGGAGTGCAGACTGTAGCGGATGCCTCAAACAGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000702 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0006139 GO:0006220 GO:0006244 GO:0006259 GO:0006281 GO:0006282 GO:0006284 GO:0006285 GO:0006289 GO:0006304 GO:0006355 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0008534 GO:0009056 GO:0009058 GO:0009117 GO:0009166 GO:0009219 GO:0009223 GO:0009262 GO:0009264 GO:0009314 GO:0009394 GO:0009628 GO:0009889 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010605 GO:0016363 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016798 GO:0016799 GO:0018130 GO:0019104 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0019637 GO:0019692 GO:0031323 GO:0031324 GO:0031326 GO:0031974 GO:0031981 GO:0032356 GO:0032357 GO:0032991 GO:0033554 GO:0033683 GO:0034399 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045007 GO:0045008 GO:0045738 GO:0045934 GO:0046386 GO:0046434 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051716 GO:0055086 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0072527 GO:0072529 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901135 GO:1901136 GO:1901291 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1903506 GO:2000112 GO:2000779 GO:2000780 GO:2001020 GO:2001021 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03410 map03410
Pfam Domains
Protein Families
HhH-GPD OGG_N

Protein Analysis

378

Amino Acids

41.28

Weight (kDa)

9.27

Isoelectric Point (pI)

43.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OGG_N PF07934 52 - 163 3.6e-24 8-oxoguanine DNA glycosylase, N-terminal domain
HhH-GPD PF00730 165 - 301 1.7e-09 HhH-GPD superfamily base excision DNA repair protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015250)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21710
fragaria_vesca FvH4_2g27490
prunus_persica Prupe.1G492700_v2.0.a1
pyrus_communis pycom15g30910
rosa_chinensis RchiOBHm_Chr6g0296321
rosa_laevigata RLG00000011706
rosa_multiflora Rmu_co8447813.1_g000001 Rmu_sc0001478.1_g000002
rosa_roxburghii Rroxscaffold_7G00171630 Rroxscaffold_7G00178450
rosa_rugosa Rorug06G0261100
rosa_samantha Rh6AG372800 Rh6BG380900 Rh6CG386100 Rh6DG373600
rosa_wichuraiana Rw6G032500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 948
AciI CCGC 5 cut(s) 321, 450, 946, 953, 1115
AclWI GGATC 2 cut(s) 43, 624
AcoI YGGCCR 3 cut(s) 202, 384, 943
AcsI RAATTY 2 cut(s) 390, 602
AcuI CTGAAG 1 cut(s) 221
AcvI CACGTG 1 cut(s) 874
AfaI GTAC 2 cut(s) 242, 680
AfiI CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 952
AflIII ACRYGT 2 cut(s) 871, 873
AgsI TTSAA 3 cut(s) 510, 758, 1059
AhdI GACNNNNNGTC 1 cut(s) 550
AjnI CCWGG 5 cut(s) 264, 381, 419, 715, 793
AleI CACNNNNGTG 2 cut(s) 481, 874
AluBI AGCT 7 cut(s) 99, 175, 433, 646, 827, 910, 937
AluI AGCT 7 cut(s) 99, 175, 433, 646, 827, 910, 937
Alw21I GWGCWC 3 cut(s) 177, 435, 648
Alw26I GTCTC 5 cut(s) 13, 37, 214, 274, 747
AlwI GGATC 2 cut(s) 43, 624
AlwNI CAGNNNCTG 1 cut(s) 499
AoxI GGCC 7 cut(s) 147, 202, 229, 384, 654, 943, 1093
ApaI GGGCCC 1 cut(s) 151
ApeKI GCWGC 1 cut(s) 815
ApoI RAATTY 2 cut(s) 390, 602
AspLEI GCGC 1 cut(s) 455
AspS9I GGNCC 7 cut(s) 147, 148, 230, 258, 472, 803, 1093
AsuHPI GGTGA 5 cut(s) 154, 181, 305, 737, 781
AsuNHI GCTAGC 1 cut(s) 910
AvaII GGWCC 3 cut(s) 258, 472, 803
BaeGI GKGCMC 1 cut(s) 151
BaeI ACNNNNGTAYC 2 cut(s) 858, 891
BanII GRGCYC 6 cut(s) 151, 177, 435, 648, 922, 997
BbrPI CACGTG 1 cut(s) 874
BbsI GAAGAC 1 cut(s) 546
Bbv12I GWGCWC 3 cut(s) 177, 435, 648
BbvI GCAGC 1 cut(s) 827
BccI CCATC 3 cut(s) 76, 616, 984
BceAI ACGGC 2 cut(s) 307, 1080
BcgI CGANNNNNNTGC 6 cut(s) 320, 354, 615, 649, 690, 724
BciT130I CCWGG 5 cut(s) 266, 383, 421, 717, 795
BclI TGATCA 1 cut(s) 841
BcoDI GTCTC 5 cut(s) 13, 37, 214, 274, 747
BfaI CTAG 2 cut(s) 456, 911
BfmI CTRYAG 2 cut(s) 579, 1110
BfoI RGCGCY 1 cut(s) 456
BglI GCCNNNNNGGC 1 cut(s) 347
BisI GCNGC 3 cut(s) 451, 816, 946
BlsI GCNGC 3 cut(s) 452, 817, 947
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 5 cut(s) 266, 383, 421, 717, 795
Bme18I GGWCC 3 cut(s) 258, 472, 803
BmeRI GACNNNNNGTC 1 cut(s) 550
BmgT120I GGNCC 7 cut(s) 147, 148, 230, 258, 472, 803, 1093
BmiI GGNNCC 7 cut(s) 149, 150, 259, 260, 474, 566, 805
BmrFI CCNGG 5 cut(s) 266, 383, 421, 717, 795
BmrI ACTGGG 2 cut(s) 160, 569
BmsI GCATC 1 cut(s) 1108
BmtI GCTAGC 1 cut(s) 914
BmuI ACTGGG 2 cut(s) 160, 569
BpiI GAAGAC 1 cut(s) 546
BplI GAGNNNNNCTC 2 cut(s) 389, 421
BpmI CTGGAG 2 cut(s) 260, 816
Bpu10I CCTNAGC 2 cut(s) 95, 906
BpuEI CTTGAG 1 cut(s) 500
BsaAI YACGTR 1 cut(s) 874
BsaBI GATNNNNATC 1 cut(s) 53
BsaI GGTCTC 2 cut(s) 13, 274
BsaJI CCNNGG 5 cut(s) 381, 612, 807, 1065, 1096
BsaWI WCCGGW 1 cut(s) 213
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 952
Bse118I RCCGGY 4 cut(s) 200, 227, 245, 656
Bse1I ACTGG 3 cut(s) 166, 564, 691
Bse3DI GCAATG 3 cut(s) 633, 701, 788
Bse8I GATNNNNATC 1 cut(s) 53
BseBI CCWGG 5 cut(s) 266, 383, 421, 717, 795
BseDI CCNNGG 5 cut(s) 381, 612, 807, 1065, 1096
BseGI GGATG 4 cut(s) 68, 608, 995, 1123
BseJI GATNNNNATC 1 cut(s) 53
BseLI CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 952
BseMI GCAATG 3 cut(s) 633, 701, 788
BseMII CTCAG 4 cut(s) 8, 478, 661, 897
BseNI ACTGG 3 cut(s) 166, 564, 691
BseSI GKGCMC 1 cut(s) 151
BseXI GCAGC 1 cut(s) 827
BsgI GTGCAG 1 cut(s) 1124
Bsh1236I CGCG 1 cut(s) 948
BshFI GGCC 7 cut(s) 149, 204, 231, 386, 656, 945, 1095
BsiHKAI GWGCWC 3 cut(s) 177, 435, 648
BsiSI CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
BslFI GGGAC 2 cut(s) 244, 789
BslI CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 952
BsmAI GTCTC 5 cut(s) 13, 37, 214, 274, 747
BsmFI GGGAC 2 cut(s) 244, 789
BsnI GGCC 7 cut(s) 149, 204, 231, 386, 656, 945, 1095
Bso31I GGTCTC 2 cut(s) 13, 274
Bsp120I GGGCCC 1 cut(s) 147
Bsp1286I GDGCHC 6 cut(s) 151, 177, 435, 648, 922, 997
Bsp143I GATC 3 cut(s) 48, 616, 841
BspACI CCGC 5 cut(s) 321, 450, 946, 953, 1115
BspANI GGCC 7 cut(s) 149, 204, 231, 386, 656, 945, 1095
BspCNI CTCAG 4 cut(s) 9, 477, 660, 898
BspFNI CGCG 1 cut(s) 948
BspLI GGNNCC 7 cut(s) 149, 150, 259, 260, 474, 566, 805
BspOI GCTAGC 1 cut(s) 914
BspPI GGATC 2 cut(s) 43, 624
BspTNI GGTCTC 2 cut(s) 13, 274
BsrDI GCAATG 3 cut(s) 633, 701, 788
BsrFI RCCGGY 4 cut(s) 200, 227, 245, 656
BsrI ACTGG 3 cut(s) 166, 564, 691
BssAI RCCGGY 4 cut(s) 200, 227, 245, 656
BssECI CCNNGG 5 cut(s) 381, 612, 807, 1065, 1096
BssMI GATC 3 cut(s) 48, 616, 841
BssT1I CCWWGG 3 cut(s) 612, 807, 1065
Bst2UI CCWGG 5 cut(s) 266, 383, 421, 717, 795
Bst4CI ACNGT 3 cut(s) 694, 1111, 1130
Bst6I CTCTTC 5 cut(s) 35, 240, 723, 750, 759
BstBAI YACGTR 1 cut(s) 874
BstC8I GCNNGC 2 cut(s) 435, 912
BstDEI CTNAG 6 cut(s) 17, 95, 464, 647, 675, 906
BstDSI CCRYGG 1 cut(s) 1096
BstENI CCTNNNNNAGG 1 cut(s) 720
BstF5I GGATG 4 cut(s) 68, 608, 995, 1123
BstFNI CGCG 1 cut(s) 948
BstH2I RGCGCY 1 cut(s) 456
BstHHI GCGC 1 cut(s) 455
BstKTI GATC 3 cut(s) 51, 619, 844
BstMAI GTCTC 5 cut(s) 13, 37, 214, 274, 747
BstMBI GATC 3 cut(s) 48, 616, 841
BstMWI GCNNNNNNNGC 5 cut(s) 181, 347, 434, 824, 992
BstNI CCWGG 5 cut(s) 266, 383, 421, 717, 795
BstNSI RCATGY 1 cut(s) 822
BstSCI CCNGG 5 cut(s) 264, 381, 419, 715, 793
BstSFI CTRYAG 2 cut(s) 579, 1110
BstSLI GKGCMC 1 cut(s) 151
BstUI CGCG 1 cut(s) 948
BstV1I GCAGC 1 cut(s) 827
BstV2I GAAGAC 1 cut(s) 546
BstX2I RGATCY 1 cut(s) 48
BstXI CCANNNNNNTGG 2 cut(s) 445, 541
BstYI RGATCY 1 cut(s) 48
BsuRI GGCC 7 cut(s) 149, 204, 231, 386, 656, 945, 1095
BtgI CCRYGG 1 cut(s) 1096
BtsCI GGATG 4 cut(s) 68, 608, 995, 1123
BtsIMutI CAGTG 4 cut(s) 8, 557, 690, 1135
Cac8I GCNNGC 2 cut(s) 435, 912
CaiI CAGNNNCTG 1 cut(s) 499
CfoI GCGC 1 cut(s) 455
Cfr10I RCCGGY 4 cut(s) 200, 227, 245, 656
Cfr13I GGNCC 7 cut(s) 147, 148, 230, 258, 472, 803, 1093
CseI GACGC 1 cut(s) 785
CsiI ACCWGGT 2 cut(s) 264, 715
Csp6I GTAC 2 cut(s) 241, 679
CviAII CATG 4 cut(s) 34, 370, 599, 819
CviQI GTAC 2 cut(s) 241, 679
DdeI CTNAG 6 cut(s) 17, 95, 464, 647, 675, 906
DpnI GATC 3 cut(s) 50, 618, 843
DpnII GATC 3 cut(s) 48, 616, 841
DriI GACNNNNNGTC 1 cut(s) 550
EaeI YGGCCR 3 cut(s) 202, 384, 943
Eam1104I CTCTTC 5 cut(s) 35, 240, 723, 750, 759
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 5 cut(s) 35, 240, 723, 750, 759
EciI GGCGGA 2 cut(s) 310, 968
Ecl136II GAGCTC 3 cut(s) 175, 433, 646
Eco130I CCWWGG 3 cut(s) 612, 807, 1065
Eco24I GRGCYC 6 cut(s) 151, 177, 435, 648, 922, 997
Eco31I GGTCTC 2 cut(s) 13, 274
Eco47I GGWCC 3 cut(s) 258, 472, 803
Eco53kI GAGCTC 3 cut(s) 175, 433, 646
Eco57I CTGAAG 1 cut(s) 221
Eco72I CACGTG 1 cut(s) 874
EcoICRI GAGCTC 3 cut(s) 175, 433, 646
EcoNI CCTNNNNNAGG 1 cut(s) 720
EcoO109I RGGNCCY 3 cut(s) 148, 258, 472
EcoRII CCWGG 5 cut(s) 264, 381, 419, 715, 793
EcoT14I CCWWGG 3 cut(s) 612, 807, 1065
EcoT38I GRGCYC 6 cut(s) 151, 177, 435, 648, 922, 997
ErhI CCWWGG 3 cut(s) 612, 807, 1065
FaeI CATG 4 cut(s) 37, 373, 602, 822
FaiI YATR 8 cut(s) 35, 371, 600, 669, 820, 824, 975, 984
FalI AAGNNNNNCTT 2 cut(s) 720, 752
FaqI GGGAC 2 cut(s) 244, 789
FatI CATG 4 cut(s) 33, 369, 598, 818
FbaI TGATCA 1 cut(s) 841
Fnu4HI GCNGC 3 cut(s) 451, 816, 946
FokI GGATG 4 cut(s) 55, 595, 1002, 1130
FriOI GRGCYC 6 cut(s) 151, 177, 435, 648, 922, 997
Fsp4HI GCNGC 3 cut(s) 451, 816, 946
FspBI CTAG 2 cut(s) 456, 911
GlaI GCGC 1 cut(s) 454
GluI GCNGC 3 cut(s) 451, 816, 946
GsuI CTGGAG 2 cut(s) 260, 816
HaeII RGCGCY 1 cut(s) 456
HaeIII GGCC 7 cut(s) 149, 204, 231, 386, 656, 945, 1095
HapII CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
HgaI GACGC 1 cut(s) 785
HhaI GCGC 1 cut(s) 455
Hin1II CATG 4 cut(s) 37, 373, 602, 822
Hin6I GCGC 1 cut(s) 453
HinP1I GCGC 1 cut(s) 453
HinfI GANTC 4 cut(s) 332, 344, 416, 490
HpaII CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
HphI GGTGA 5 cut(s) 154, 181, 305, 737, 781
Hpy166II GTNNAC 2 cut(s) 243, 544
Hpy188I TCNGA 8 cut(s) 172, 331, 415, 525, 637, 650, 750, 927
Hpy188III TCNNGA 1 cut(s) 905
Hpy8I GTNNAC 2 cut(s) 243, 544
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 5 cut(s) 202, 220, 320, 691, 1035
HpyCH4III ACNGT 3 cut(s) 694, 1111, 1130
HpyCH4IV ACGT 2 cut(s) 297, 873
HpyCH4V TGCA 3 cut(s) 706, 1082, 1105
HpyF10VI GCNNNNNNNGC 5 cut(s) 181, 347, 434, 824, 992
HpyF3I CTNAG 6 cut(s) 17, 95, 464, 647, 675, 906
HpySE526I ACGT 2 cut(s) 297, 873
Hsp92II CATG 4 cut(s) 37, 373, 602, 822
HspAI GCGC 1 cut(s) 453
KflI GGGWCCC 1 cut(s) 258
Ksp22I TGATCA 1 cut(s) 841
Kzo9I GATC 3 cut(s) 48, 616, 841
LmnI GCTCC 1 cut(s) 104
Lsp1109I GCAGC 1 cut(s) 827
LweI GCATC 1 cut(s) 1108
MabI ACCWGGT 2 cut(s) 264, 715
MaeI CTAG 2 cut(s) 456, 911
MaeII ACGT 2 cut(s) 297, 873
MalI GATC 3 cut(s) 50, 618, 843
MboI GATC 3 cut(s) 48, 616, 841
MboII GAAGA 9 cut(s) 49, 52, 227, 498, 546, 737, 740, 776, 892
MflI RGATCY 1 cut(s) 48
MhlI GDGCHC 6 cut(s) 151, 177, 435, 648, 922, 997
MluCI AATT 4 cut(s) 390, 528, 602, 1019
MlyI GAGTC 2 cut(s) 341, 353
MmeI TCCRAC 2 cut(s) 104, 615
MseI TTAA 1 cut(s) 683
MslI CAYNNNNRTG 2 cut(s) 481, 874
MspI CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
MspR9I CCNGG 5 cut(s) 266, 383, 421, 717, 795
MvaI CCWGG 5 cut(s) 266, 383, 421, 717, 795
MvnI CGCG 1 cut(s) 948
MwoI GCNNNNNNNGC 5 cut(s) 181, 347, 434, 824, 992
NdeII GATC 3 cut(s) 48, 616, 841
NheI GCTAGC 1 cut(s) 910
NlaIII CATG 4 cut(s) 37, 373, 602, 822
NlaIV GGNNCC 7 cut(s) 149, 150, 259, 260, 474, 566, 805
NmeAIII GCCGAG 3 cut(s) 367, 386, 454
NspI RCATGY 1 cut(s) 822
OliI CACNNNNGTG 2 cut(s) 481, 874
PfeI GAWTC 2 cut(s) 416, 490
PkrI GCNGC 3 cut(s) 452, 817, 947
PleI GAGTC 2 cut(s) 340, 352
PmaCI CACGTG 1 cut(s) 874
PmlI CACGTG 1 cut(s) 874
PpsI GAGTC 2 cut(s) 340, 352
Ppu21I YACGTR 1 cut(s) 874
PpuMI RGGWCCY 2 cut(s) 258, 472
Psp124BI GAGCTC 3 cut(s) 177, 435, 648
Psp5II RGGWCCY 2 cut(s) 258, 472
Psp6I CCWGG 5 cut(s) 264, 381, 419, 715, 793
PspCI CACGTG 1 cut(s) 874
PspGI CCWGG 5 cut(s) 264, 381, 419, 715, 793
PspN4I GGNNCC 7 cut(s) 149, 150, 259, 260, 474, 566, 805
PspOMI GGGCCC 1 cut(s) 147
PspPI GGNCC 7 cut(s) 147, 148, 230, 258, 472, 803, 1093
PspPPI RGGWCCY 2 cut(s) 258, 472
PstNI CAGNNNCTG 1 cut(s) 499
PsuI RGATCY 1 cut(s) 48
RsaI GTAC 2 cut(s) 242, 680
RsaNI GTAC 2 cut(s) 241, 679
RseI CAYNNNNRTG 2 cut(s) 481, 874
SacI GAGCTC 3 cut(s) 177, 435, 648
SaqAI TTAA 1 cut(s) 683
SatI GCNGC 3 cut(s) 451, 816, 946
Sau3AI GATC 3 cut(s) 48, 616, 841
Sau96I GGNCC 7 cut(s) 147, 148, 230, 258, 472, 803, 1093
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 2 cut(s) 341, 353
ScrFI CCNGG 5 cut(s) 266, 383, 421, 717, 795
SduI GDGCHC 6 cut(s) 151, 177, 435, 648, 922, 997
SexAI ACCWGGT 2 cut(s) 264, 715
SfaNI GCATC 1 cut(s) 1108
SfcI CTRYAG 2 cut(s) 579, 1110
SgrAI CRCCGGYG 1 cut(s) 245
SinI GGWCC 3 cut(s) 258, 472, 803
SmiMI CAYNNNNRTG 2 cut(s) 481, 874
SmlI CTYRAG 1 cut(s) 479
SmoI CTYRAG 1 cut(s) 479
Sse9I AATT 4 cut(s) 390, 528, 602, 1019
SsiI CCGC 5 cut(s) 321, 450, 946, 953, 1115
SspMI CTAG 2 cut(s) 456, 911
SstI GAGCTC 3 cut(s) 177, 435, 648
StyD4I CCNGG 5 cut(s) 264, 381, 419, 715, 793
StyI CCWWGG 3 cut(s) 612, 807, 1065
TaaI ACNGT 3 cut(s) 694, 1111, 1130
TaiI ACGT 2 cut(s) 300, 876
TaqI TCGA 3 cut(s) 357, 710, 762
TasI AATT 4 cut(s) 390, 528, 602, 1019
TatI WGTACW 2 cut(s) 240, 678
TauI GCSGC 2 cut(s) 453, 948
TfiI GAWTC 2 cut(s) 416, 490
Tru1I TTAA 1 cut(s) 683
Tru9I TTAA 1 cut(s) 683
TscAI CASTG 4 cut(s) 15, 564, 697, 1135
TseI GCWGC 1 cut(s) 815
TspDTI ATGAA 2 cut(s) 50, 615
TspRI CASTG 4 cut(s) 15, 564, 697, 1135
VpaK11BI GGWCC 3 cut(s) 258, 472, 803
XagI CCTNNNNNAGG 1 cut(s) 720
XapI RAATTY 2 cut(s) 390, 602
XceI RCATGY 1 cut(s) 822
XspI CTAG 2 cut(s) 456, 911
ZrmI AGTACT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.