RLG00000011706

N-glycosylase DNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0015250
Physical Location & Seq
Forward (+)
12032901 .. 12035772
2872 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011706

Sequence Viewer

Length: 1599 bp
ATGGGCACCAAATTGGAGGAAACCCATAGAAATCAGGCCAAATTCCGGCCACCAGAAATTAGGTCGGATCTTGGGTGCAGGCATGCAGCTGAGGGATCCCTATCGTCATCATTATCGGAGAGACCGGTTCCCGTCGAAACAAGGCCGCGTGGTTCGCGTCGGCTCTGTCTCCAACTACGAAGTCCAGATCTGTCACGCCACACCACTGTCTGCACTGGGTGCTCTGTTTACGGCTTAAACGACAAGGTCTCGTTCTCGGGATCTGACCAGACCGACCAGCCGGCGAGCCTCTACGCAGCCACGAAGAAAGCCGGCGAGGCCCACACAATCGACGGCGGAGGATTGGCCGATTTACATGCCTCGAGAAGAGTAACGAGTCTTCCCCTTCCTCTTTTCCCTCTTTCTGGGATTGGAGGGAATTGCAATCCGGACCTGAAATTCCAATTCCAATTCCAAGTTTTGATGCTCTCACTGAAACTGAGACCTCTCTCAACCATGAAGAAGAAGAGACAAATCCCAATCCAATCGCCTCCATCCACCCCTCCAACCCCACAAACCCTAAGCTCCAAATCCAAAAGACCCAAAACCCTCGTCAGATCCCCCAAATGGGTCCCACTCAACCTCACCCAGTCCGAGCTCTCCCTGCCCCTCACTTTCCCCACCGGCCAAACCTTCCGGTGGAGACAAACCGGCCCTCTTCAGTACACCGGCGTTGTTGGGTCCCACCTAGTCTCCCTCCAGCACCTCCAAAACGGCGACGTTTCCTACTGCCTTCACCAATCCAAAACTTCCGAGTCCAGTGCCGAGTCGGCTCTGCTCGATTTTCTCAACACGGGTATTTCCCTGGCCGGAATTTGGGAGGTTTTCTCGGCTTCCGATTCCAGGTTTGCCGAGCTCGCCACCCATTTGGGCGGCGCTAGAGTTCTCAGGCAAGACCCACTTGAGTGTTTGATTCAGTTCCTGTGTTCTTCAAATAACAACATTCAGAGAATTACCAAAATGGTGGACTTTGTGTCTTCATTGGGCACCCATTTGGGGTCTGTTGCAGGTTTTGAGTTCCATGAATTTCCATCCTTGGATCGCTTGTCAATGGTGTCAGAACAAGAGCTCAGAGAGGCCGGTTTCGGTTATAGGGCTAAGTACTTAACTGGCACTGTGAAGGCATTGCAGTCGAAACCTGGGGGAGGTGAAGAGTGGCTTTTGTCTCTTCGGAAACTTGAACTCGAAGAGGTGATTGATGCTCTTACCACATTGCCTGGAGTTGGTCCCAAGGTGGCAGCATGTATAGCTCTTTTTTCGCTTGATCAACACAATGCCATTCCTGTTGATACACATGTGTGGAAGATTGCTACCAGATACCTCATACCTGAGCTAGCAGGGGCTCGTCTGACACCGAAGCTCTGCGGCCGTGTGGCGGAGGCATTTGTGAGTAAATATGGGAAATATGCTGGATGGGCTCAAACTCTGCTGTTTGTTGCTGAATTGCCTTCACAAAAAGCCCTCCTACCACCACATTTTTCAAATGCCAAAGAGACTAAATCTGCAAAGGGAAACGGCCGTGGAGTGCAGACTGTAGCGGATGCCTCAAACAGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000702 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0006139 GO:0006220 GO:0006244 GO:0006259 GO:0006281 GO:0006282 GO:0006284 GO:0006285 GO:0006289 GO:0006304 GO:0006355 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0008534 GO:0009056 GO:0009058 GO:0009117 GO:0009166 GO:0009219 GO:0009223 GO:0009262 GO:0009264 GO:0009314 GO:0009394 GO:0009628 GO:0009889 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010605 GO:0016363 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016798 GO:0016799 GO:0018130 GO:0019104 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0019637 GO:0019692 GO:0031323 GO:0031324 GO:0031326 GO:0031974 GO:0031981 GO:0032356 GO:0032357 GO:0032991 GO:0033554 GO:0033683 GO:0034399 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045007 GO:0045008 GO:0045738 GO:0045934 GO:0046386 GO:0046434 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051716 GO:0055086 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0072527 GO:0072529 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901135 GO:1901136 GO:1901291 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1903506 GO:2000112 GO:2000779 GO:2000780 GO:2001020 GO:2001021 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03410 map03410
Pfam Domains
Protein Families
HhH-GPD OGG_N

Protein Analysis

533

Amino Acids

57.98

Weight (kDa)

9.3

Isoelectric Point (pI)

47.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OGG_N PF07934 206 - 317 1.2e-23 8-oxoguanine DNA glycosylase, N-terminal domain
HhH-GPD PF00730 319 - 455 1.7e-08 HhH-GPD superfamily base excision DNA repair protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015250)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21710
fragaria_vesca FvH4_2g27490
prunus_persica Prupe.1G492700_v2.0.a1
pyrus_communis pycom15g30910
rosa_chinensis RchiOBHm_Chr6g0296321
rosa_laevigata RLG00000011706
rosa_multiflora Rmu_co8447813.1_g000001 Rmu_sc0001478.1_g000002
rosa_roxburghii Rroxscaffold_7G00171630 Rroxscaffold_7G00178450
rosa_rugosa Rorug06G0261100
rosa_samantha Rh6AG372800 Rh6BG380900 Rh6CG386100 Rh6DG373600
rosa_wichuraiana Rw6G032500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1037
AccB1I GGYRCC 2 cut(s) 5, 1025
AccII CGCG 2 cut(s) 148, 157
AccIII TCCGGA 1 cut(s) 427
AciI CCGC 6 cut(s) 146, 336, 912, 1404, 1415, 1577
AclWI GGATC 6 cut(s) 75, 90, 103, 268, 591, 1086
AcoI YGGCCR 6 cut(s) 47, 345, 664, 846, 1405, 1555
AcsI RAATTY 4 cut(s) 41, 437, 852, 1064
AcuI CTGAAG 1 cut(s) 683
AdeI CACNNNGTG 1 cut(s) 219
AfaI GTAC 2 cut(s) 704, 1142
AflIII ACRYGT 1 cut(s) 1333
AgeI ACCGGT 1 cut(s) 124
AgsI TTSAA 3 cut(s) 972, 1220, 1521
AhdI GACNNNNNGTC 1 cut(s) 1012
AjnI CCWGG 4 cut(s) 843, 881, 1177, 1255
AleI CACNNNNGTG 2 cut(s) 943, 1336
AluBI AGCT 8 cut(s) 89, 564, 637, 895, 1108, 1289, 1372, 1399
AluI AGCT 8 cut(s) 89, 564, 637, 895, 1108, 1289, 1372, 1399
Alw21I GWGCWC 4 cut(s) 224, 639, 897, 1110
Alw26I GTCTC 9 cut(s) 115, 173, 253, 475, 502, 676, 736, 1209, 1526
AlwI GGATC 6 cut(s) 75, 90, 103, 268, 591, 1086
AlwNI CAGNNNCTG 1 cut(s) 961
Ama87I CYCGRG 2 cut(s) 256, 361
Aor13HI TCCGGA 1 cut(s) 427
ApeKI GCWGC 3 cut(s) 86, 296, 1277
ApoI RAATTY 4 cut(s) 41, 437, 852, 1064
ArsI GACNNNNNNTTYG 2 cut(s) 576, 608
AsiGI ACCGGT 1 cut(s) 124
AspLEI GCGC 1 cut(s) 917
AspS9I GGNCC 6 cut(s) 319, 430, 610, 692, 720, 1265
AsuHPI GGTGA 4 cut(s) 616, 767, 1199, 1243
AsuNHI GCTAGC 1 cut(s) 1372
AvaI CYCGRG 2 cut(s) 256, 361
AvaII GGWCC 4 cut(s) 430, 610, 720, 1265
BaeGI GKGCMC 2 cut(s) 8, 1028
BaeI ACNNNNGTAYC 2 cut(s) 1320, 1353
BamHI GGATCC 1 cut(s) 95
BanI GGYRCC 2 cut(s) 5, 1025
BanII GRGCYC 5 cut(s) 639, 897, 1110, 1384, 1459
BarI GAAGNNNNNNTAC 2 cut(s) 363, 395
BbsI GAAGAC 2 cut(s) 371, 1008
Bbv12I GWGCWC 4 cut(s) 224, 639, 897, 1110
BbvCI CCTCAGC 1 cut(s) 90
BbvI GCAGC 3 cut(s) 98, 308, 1289
BccI CCATC 3 cut(s) 541, 1078, 1446
BceAI ACGGC 6 cut(s) 247, 349, 769, 1392, 1542, 1570
BcgI CGANNNNNNTGC 6 cut(s) 338, 372, 782, 816, 1152, 1186
BciT130I CCWGG 4 cut(s) 845, 883, 1179, 1257
BclI TGATCA 1 cut(s) 1303
BcoDI GTCTC 9 cut(s) 115, 173, 253, 475, 502, 676, 736, 1209, 1526
BfaI CTAG 3 cut(s) 728, 918, 1373
BfmI CTRYAG 1 cut(s) 1572
BfoI RGCGCY 1 cut(s) 918
BfuAI ACCTGC 1 cut(s) 1037
BglI GCCNNNNNGGC 2 cut(s) 317, 809
BglII AGATCT 1 cut(s) 187
BisI GCNGC 6 cut(s) 87, 146, 297, 913, 1278, 1405
BlsI GCNGC 6 cut(s) 88, 147, 298, 914, 1279, 1406
BmcAI AGTACT 1 cut(s) 1142
Bme1390I CCNGG 4 cut(s) 845, 883, 1179, 1257
Bme18I GGWCC 4 cut(s) 430, 610, 720, 1265
BmeRI GACNNNNNGTC 1 cut(s) 1012
BmeT110I CYCGRG 2 cut(s) 256, 361
BmgT120I GGNCC 6 cut(s) 319, 430, 610, 692, 720, 1265
BmiI GGNNCC 9 cut(s) 7, 97, 129, 611, 612, 721, 722, 1027, 1267
BmrFI CCNGG 4 cut(s) 845, 883, 1179, 1257
BmrI ACTGGG 2 cut(s) 225, 622
BmsI GCATC 3 cut(s) 453, 1228, 1570
BmtI GCTAGC 1 cut(s) 1376
BmuI ACTGGG 2 cut(s) 225, 622
BpiI GAAGAC 2 cut(s) 371, 1008
BplI GAGNNNNNCTC 2 cut(s) 851, 883
BpmI CTGGAG 2 cut(s) 722, 1278
Bpu10I CCTNAGC 3 cut(s) 90, 560, 1368
BpuEI CTTGAG 1 cut(s) 962
BsaBI GATNNNNATC 1 cut(s) 100
BsaI GGTCTC 3 cut(s) 115, 253, 475
BsaJI CCNNGG 5 cut(s) 843, 1074, 1178, 1269, 1558
BsaWI WCCGGW 3 cut(s) 124, 427, 675
BsaXI ACNNNNNCTCC 2 cut(s) 716, 746
Bse118I RCCGGY 7 cut(s) 124, 280, 311, 662, 689, 707, 1118
Bse1I ACTGG 4 cut(s) 220, 628, 798, 1153
Bse3DI GCAATG 2 cut(s) 1163, 1250
Bse8I GATNNNNATC 1 cut(s) 100
BseAI TCCGGA 1 cut(s) 427
BseBI CCWGG 4 cut(s) 845, 883, 1179, 1257
BseDI CCNNGG 5 cut(s) 843, 1074, 1178, 1269, 1558
BseGI GGATG 4 cut(s) 533, 1070, 1457, 1585
BseJI GATNNNNATC 1 cut(s) 100
BseMI GCAATG 2 cut(s) 1163, 1250
BseMII CTCAG 5 cut(s) 81, 470, 940, 1123, 1359
BseNI ACTGG 4 cut(s) 220, 628, 798, 1153
BseSI GKGCMC 2 cut(s) 8, 1028
BseX3I CGGCCG 2 cut(s) 1405, 1555
BseXI GCAGC 3 cut(s) 98, 308, 1289
BsgI GTGCAG 3 cut(s) 97, 196, 1586
Bsh1236I CGCG 2 cut(s) 148, 157
Bsh1285I CGRYCG 2 cut(s) 1408, 1558
BshNI GGYRCC 2 cut(s) 5, 1025
BshTI ACCGGT 1 cut(s) 124
BsiEI CGRYCG 2 cut(s) 1408, 1558
BsiHKAI GWGCWC 4 cut(s) 224, 639, 897, 1110
BsiHKCI CYCGRG 2 cut(s) 256, 361
BslFI GGGAC 3 cut(s) 596, 706, 1251
BsmAI GTCTC 9 cut(s) 115, 173, 253, 475, 502, 676, 736, 1209, 1526
BsmFI GGGAC 3 cut(s) 596, 706, 1251
Bso31I GGTCTC 3 cut(s) 115, 253, 475
BsoBI CYCGRG 2 cut(s) 256, 361
Bsp1286I GDGCHC 8 cut(s) 8, 224, 639, 897, 1028, 1110, 1384, 1459
Bsp13I TCCGGA 1 cut(s) 427
Bsp143I GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
BspACI CCGC 6 cut(s) 146, 336, 912, 1404, 1415, 1577
BspCNI CTCAG 5 cut(s) 82, 471, 939, 1122, 1360
BspEI TCCGGA 1 cut(s) 427
BspFNI CGCG 2 cut(s) 148, 157
BspLI GGNNCC 9 cut(s) 7, 97, 129, 611, 612, 721, 722, 1027, 1267
BspMI ACCTGC 1 cut(s) 1037
BspOI GCTAGC 1 cut(s) 1376
BspPI GGATC 6 cut(s) 75, 90, 103, 268, 591, 1086
BspT107I GGYRCC 2 cut(s) 5, 1025
BspTNI GGTCTC 3 cut(s) 115, 253, 475
BsrDI GCAATG 2 cut(s) 1163, 1250
BsrFI RCCGGY 7 cut(s) 124, 280, 311, 662, 689, 707, 1118
BsrI ACTGG 4 cut(s) 220, 628, 798, 1153
BssAI RCCGGY 7 cut(s) 124, 280, 311, 662, 689, 707, 1118
BssECI CCNNGG 5 cut(s) 843, 1074, 1178, 1269, 1558
BssMI GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
BssT1I CCWWGG 2 cut(s) 1074, 1269
Bst2UI CCWGG 4 cut(s) 845, 883, 1179, 1257
Bst4CI ACNGT 4 cut(s) 208, 1156, 1573, 1592
Bst6I CTCTTC 6 cut(s) 361, 500, 702, 1185, 1212, 1221
BstAPI GCANNNNNTGC 1 cut(s) 219
BstC8I GCNNGC 7 cut(s) 80, 84, 282, 286, 313, 897, 1374
BstDEI CTNAG 7 cut(s) 90, 479, 560, 926, 1109, 1137, 1368
BstDSI CCRYGG 1 cut(s) 1558
BstENI CCTNNNNNAGG 1 cut(s) 1182
BstF5I GGATG 4 cut(s) 533, 1070, 1457, 1585
BstFNI CGCG 2 cut(s) 148, 157
BstH2I RGCGCY 1 cut(s) 918
BstHHI GCGC 1 cut(s) 917
BstKTI GATC 7 cut(s) 70, 98, 190, 263, 599, 1081, 1306
BstMAI GTCTC 9 cut(s) 115, 173, 253, 475, 502, 676, 736, 1209, 1526
BstMBI GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
BstMCI CGRYCG 2 cut(s) 1408, 1558
BstMWI GCNNNNNNNGC 8 cut(s) 154, 219, 317, 643, 809, 896, 1286, 1454
BstNI CCWGG 4 cut(s) 845, 883, 1179, 1257
BstNSI RCATGY 4 cut(s) 86, 359, 1284, 1337
BstSCI CCNGG 4 cut(s) 843, 881, 1177, 1255
BstSFI CTRYAG 1 cut(s) 1572
BstSLI GKGCMC 2 cut(s) 8, 1028
BstUI CGCG 2 cut(s) 148, 157
BstV1I GCAGC 3 cut(s) 98, 308, 1289
BstV2I GAAGAC 2 cut(s) 371, 1008
BstX2I RGATCY 5 cut(s) 67, 95, 187, 260, 596
BstXI CCANNNNNNTGG 2 cut(s) 907, 1003
BstYI RGATCY 5 cut(s) 67, 95, 187, 260, 596
BstZI CGGCCG 2 cut(s) 1405, 1555
BtgI CCRYGG 1 cut(s) 1558
BtsCI GGATG 4 cut(s) 533, 1070, 1457, 1585
BtsIMutI CAGTG 6 cut(s) 204, 213, 470, 805, 1152, 1597
BveI ACCTGC 1 cut(s) 1037
Cac8I GCNNGC 7 cut(s) 80, 84, 282, 286, 313, 897, 1374
CaiI CAGNNNCTG 1 cut(s) 961
CfoI GCGC 1 cut(s) 917
Cfr10I RCCGGY 7 cut(s) 124, 280, 311, 662, 689, 707, 1118
Cfr13I GGNCC 6 cut(s) 319, 430, 610, 692, 720, 1265
CseI GACGC 1 cut(s) 146
Csp6I GTAC 2 cut(s) 703, 1141
CspAI ACCGGT 1 cut(s) 124
CviAII CATG 6 cut(s) 83, 356, 496, 1061, 1281, 1334
CviQI GTAC 2 cut(s) 703, 1141
DdeI CTNAG 7 cut(s) 90, 479, 560, 926, 1109, 1137, 1368
DpnI GATC 7 cut(s) 69, 97, 189, 262, 598, 1080, 1305
DpnII GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
DraIII CACNNNGTG 1 cut(s) 219
DriI GACNNNNNGTC 1 cut(s) 1012
EaeI YGGCCR 6 cut(s) 47, 345, 664, 846, 1405, 1555
EagI CGGCCG 2 cut(s) 1405, 1555
Eam1104I CTCTTC 6 cut(s) 361, 500, 702, 1185, 1212, 1221
Eam1105I GACNNNNNGTC 1 cut(s) 1012
EarI CTCTTC 6 cut(s) 361, 500, 702, 1185, 1212, 1221
EciI GGCGGA 2 cut(s) 351, 1430
Ecl136II GAGCTC 3 cut(s) 637, 895, 1108
EclXI CGGCCG 2 cut(s) 1405, 1555
Eco130I CCWWGG 2 cut(s) 1074, 1269
Eco24I GRGCYC 5 cut(s) 639, 897, 1110, 1384, 1459
Eco31I GGTCTC 3 cut(s) 115, 253, 475
Eco47I GGWCC 4 cut(s) 430, 610, 720, 1265
Eco52I CGGCCG 2 cut(s) 1405, 1555
Eco53kI GAGCTC 3 cut(s) 637, 895, 1108
Eco57I CTGAAG 1 cut(s) 683
Eco88I CYCGRG 2 cut(s) 256, 361
EcoICRI GAGCTC 3 cut(s) 637, 895, 1108
EcoNI CCTNNNNNAGG 1 cut(s) 1182
EcoO109I RGGNCCY 2 cut(s) 610, 720
EcoRII CCWGG 4 cut(s) 843, 881, 1177, 1255
EcoT14I CCWWGG 2 cut(s) 1074, 1269
EcoT38I GRGCYC 5 cut(s) 639, 897, 1110, 1384, 1459
ErhI CCWWGG 2 cut(s) 1074, 1269
FaeI CATG 6 cut(s) 86, 359, 499, 1064, 1284, 1337
FalI AAGNNNNNCTT 4 cut(s) 924, 956, 1182, 1214
FaqI GGGAC 3 cut(s) 596, 706, 1251
FatI CATG 6 cut(s) 82, 355, 495, 1060, 1280, 1333
FbaI TGATCA 1 cut(s) 1303
Fnu4HI GCNGC 6 cut(s) 87, 146, 297, 913, 1278, 1405
FokI GGATG 4 cut(s) 520, 1057, 1464, 1592
FriOI GRGCYC 5 cut(s) 639, 897, 1110, 1384, 1459
Fsp4HI GCNGC 6 cut(s) 87, 146, 297, 913, 1278, 1405
FspBI CTAG 3 cut(s) 728, 918, 1373
GlaI GCGC 1 cut(s) 916
GluI GCNGC 6 cut(s) 87, 146, 297, 913, 1278, 1405
GsuI CTGGAG 2 cut(s) 722, 1278
HaeII RGCGCY 1 cut(s) 918
HgaI GACGC 1 cut(s) 146
HhaI GCGC 1 cut(s) 917
Hin1II CATG 6 cut(s) 86, 359, 499, 1064, 1284, 1337
Hin6I GCGC 1 cut(s) 915
HinP1I GCGC 1 cut(s) 915
HinfI GANTC 5 cut(s) 376, 794, 806, 878, 952
HphI GGTGA 4 cut(s) 616, 767, 1199, 1243
Hpy166II GTNNAC 3 cut(s) 229, 705, 1006
Hpy188III TCNNGA 4 cut(s) 185, 258, 363, 428
Hpy8I GTNNAC 3 cut(s) 229, 705, 1006
Hpy99I CGWCG 4 cut(s) 137, 162, 335, 761
HpyAV CCTTC 5 cut(s) 395, 682, 782, 1153, 1497
HpyCH4III ACNGT 4 cut(s) 208, 1156, 1573, 1592
HpyCH4IV ACGT 1 cut(s) 759
HpyCH4V TGCA 8 cut(s) 78, 86, 213, 423, 1046, 1168, 1544, 1567
HpyF10VI GCNNNNNNNGC 8 cut(s) 154, 219, 317, 643, 809, 896, 1286, 1454
HpyF3I CTNAG 7 cut(s) 90, 479, 560, 926, 1109, 1137, 1368
HpySE526I ACGT 1 cut(s) 759
Hsp92II CATG 6 cut(s) 86, 359, 499, 1064, 1284, 1337
HspAI GCGC 1 cut(s) 915
KflI GGGWCCC 2 cut(s) 610, 720
Kpn2I TCCGGA 1 cut(s) 427
KroI GCCGGC 2 cut(s) 280, 311
KroNI GCCGGC 2 cut(s) 282, 313
Ksp22I TGATCA 1 cut(s) 1303
Kzo9I GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
LmnI GCTCC 1 cut(s) 569
Lsp1109I GCAGC 3 cut(s) 98, 308, 1289
LweI GCATC 3 cut(s) 453, 1228, 1570
MaeI CTAG 3 cut(s) 728, 918, 1373
MaeII ACGT 1 cut(s) 759
MaeIII GTNAC 2 cut(s) 192, 370
MalI GATC 7 cut(s) 69, 97, 189, 262, 598, 1080, 1305
MboI GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
MflI RGATCY 5 cut(s) 67, 95, 187, 260, 596
MhlI GDGCHC 8 cut(s) 8, 224, 639, 897, 1028, 1110, 1384, 1459
MlyI GAGTC 3 cut(s) 385, 803, 815
MmeI TCCRAC 3 cut(s) 45, 196, 569
MroI TCCGGA 1 cut(s) 427
MroNI GCCGGC 2 cut(s) 280, 311
MseI TTAA 2 cut(s) 236, 1145
MslI CAYNNNNRTG 2 cut(s) 943, 1336
MspA1I CMGCKG 1 cut(s) 89
MspR9I CCNGG 4 cut(s) 845, 883, 1179, 1257
MvaI CCWGG 4 cut(s) 845, 883, 1179, 1257
MvnI CGCG 2 cut(s) 148, 157
MwoI GCNNNNNNNGC 8 cut(s) 154, 219, 317, 643, 809, 896, 1286, 1454
NaeI GCCGGC 2 cut(s) 282, 313
NdeII GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
NgoMIV GCCGGC 2 cut(s) 280, 311
NheI GCTAGC 1 cut(s) 1372
NlaIII CATG 6 cut(s) 86, 359, 499, 1064, 1284, 1337
NlaIV GGNNCC 9 cut(s) 7, 97, 129, 611, 612, 721, 722, 1027, 1267
NmeAIII GCCGAG 3 cut(s) 829, 848, 916
NmuCI GTSAC 1 cut(s) 192
NspI RCATGY 4 cut(s) 86, 359, 1284, 1337
OliI CACNNNNGTG 2 cut(s) 943, 1336
PaeI GCATGC 1 cut(s) 86
PaeR7I CTCGAG 1 cut(s) 361
PciI ACATGT 1 cut(s) 1333
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PdiI GCCGGC 2 cut(s) 282, 313
PfeI GAWTC 2 cut(s) 878, 952
PflFI GACNNNGTC 1 cut(s) 245
PinAI ACCGGT 1 cut(s) 124
PkrI GCNGC 6 cut(s) 88, 147, 298, 914, 1279, 1406
PleI GAGTC 3 cut(s) 384, 802, 814
PpsI GAGTC 3 cut(s) 384, 802, 814
PpuMI RGGWCCY 2 cut(s) 610, 720
PscI ACATGT 1 cut(s) 1333
Psp124BI GAGCTC 3 cut(s) 639, 897, 1110
Psp5II RGGWCCY 2 cut(s) 610, 720
Psp6I CCWGG 4 cut(s) 843, 881, 1177, 1255
PspGI CCWGG 4 cut(s) 843, 881, 1177, 1255
PspN4I GGNNCC 9 cut(s) 7, 97, 129, 611, 612, 721, 722, 1027, 1267
PspPI GGNCC 6 cut(s) 319, 430, 610, 692, 720, 1265
PspPPI RGGWCCY 2 cut(s) 610, 720
PstNI CAGNNNCTG 1 cut(s) 961
PsuI RGATCY 5 cut(s) 67, 95, 187, 260, 596
PsyI GACNNNGTC 1 cut(s) 245
PvuII CAGCTG 1 cut(s) 89
RsaI GTAC 2 cut(s) 704, 1142
RsaNI GTAC 2 cut(s) 703, 1141
RseI CAYNNNNRTG 2 cut(s) 943, 1336
SacI GAGCTC 3 cut(s) 639, 897, 1110
SaqAI TTAA 2 cut(s) 236, 1145
SatI GCNGC 6 cut(s) 87, 146, 297, 913, 1278, 1405
Sau3AI GATC 7 cut(s) 67, 95, 187, 260, 596, 1078, 1303
Sau96I GGNCC 6 cut(s) 319, 430, 610, 692, 720, 1265
ScaI AGTACT 1 cut(s) 1142
SchI GAGTC 3 cut(s) 385, 803, 815
ScrFI CCNGG 4 cut(s) 845, 883, 1179, 1257
SduI GDGCHC 8 cut(s) 8, 224, 639, 897, 1028, 1110, 1384, 1459
SfaNI GCATC 3 cut(s) 453, 1228, 1570
SfcI CTRYAG 1 cut(s) 1572
Sfr274I CTCGAG 1 cut(s) 361
SgrAI CRCCGGYG 1 cut(s) 707
SinI GGWCC 4 cut(s) 430, 610, 720, 1265
SlaI CTCGAG 1 cut(s) 361
SmiMI CAYNNNNRTG 2 cut(s) 943, 1336
SmlI CTYRAG 2 cut(s) 361, 941
SmoI CTYRAG 2 cut(s) 361, 941
SphI GCATGC 1 cut(s) 86
SsiI CCGC 6 cut(s) 146, 336, 912, 1404, 1415, 1577
SspMI CTAG 3 cut(s) 728, 918, 1373
SstI GAGCTC 3 cut(s) 639, 897, 1110
StyD4I CCNGG 4 cut(s) 843, 881, 1177, 1255
StyI CCWWGG 2 cut(s) 1074, 1269
TaaI ACNGT 4 cut(s) 208, 1156, 1573, 1592
TaiI ACGT 1 cut(s) 762
TaqI TCGA 6 cut(s) 135, 330, 362, 819, 1172, 1224
TaqII GACCGA 1 cut(s) 287
TatI WGTACW 2 cut(s) 702, 1140
TauI GCSGC 3 cut(s) 148, 915, 1407
TfiI GAWTC 2 cut(s) 878, 952
Tru1I TTAA 2 cut(s) 236, 1145
Tru9I TTAA 2 cut(s) 236, 1145
TscAI CASTG 6 cut(s) 211, 220, 477, 805, 1159, 1597
TseFI GTSAC 1 cut(s) 192
TseI GCWGC 3 cut(s) 86, 296, 1277
Tsp45I GTSAC 1 cut(s) 192
TspDTI ATGAA 3 cut(s) 512, 1008, 1077
TspRI CASTG 6 cut(s) 211, 220, 477, 805, 1159, 1597
Tth111I GACNNNGTC 1 cut(s) 245
VpaK11BI GGWCC 4 cut(s) 430, 610, 720, 1265
XagI CCTNNNNNAGG 1 cut(s) 1182
XapI RAATTY 4 cut(s) 41, 437, 852, 1064
XceI RCATGY 4 cut(s) 86, 359, 1284, 1337
XhoI CTCGAG 1 cut(s) 361
XspI CTAG 3 cut(s) 728, 918, 1373
ZrmI AGTACT 1 cut(s) 1142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.