Rroxscaffold_7G00178450

N-glycosylase DNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0015250
Physical Location & Seq
Reverse (-)
18134316 .. 18135860
1545 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00178450.1

Sequence Viewer

Length: 1140 bp
ATGCTCTCACTGAAACTGAGACCTCTCTCAACCATGAAGAAGAGACAAATCCCAATCCAATCGCCTCCATCCACCCCTCCAACCCCACAAACCCTAAGCTCCAAATCCAAAAGACCCAAAACCCTAAACCTCAAATCCCCCAAATGGGTCCCACTCAACCTCACCCAGTCGGAGCTCTCCCTGCCCCTCACTTTCCCCACCGGCCAAACCTTCCGGTGGAGACAAACCGGCCCTCTTCAGTACACCGGCGTTGTTGGGTCCCACCTAGTCTCCCTCCAGCACCTCCAAAACGGCGACGTCTCCTACCGCCTTCACCAATCCGCCACTTCCGAGTCCAATGCCGAGTCGGCTGTGCTCGATTTTCTCAACACGGGTATTTCCCTGGCCGGAATTTGGGCGGTTTTCTCGGCTTCCGATTCCAGGTTTGCCGAGCTCGCCACCCATTTGGGCGGCGCTAGAGTTCTCAGGCAAGACCCACTTGAGTGTTTGATTCAGTTTCTGTGTTCTTCAAATAACAACATTCAGAGAATTACCAAAATGGTGGACTTTGTGTCTTCACTGGGGAACCATTTGGGGTCTGTAGGAGGTTTTGAGTTCCATGAATTTCCATCCTTGGATCGCTTGGCAATGGTGTCGGAACAAGAGCTCAGAGAGGCCGGTTTCGGTTATAGGGCTAAGTACTTAACTGGCACTGTGAAGGCATTGCAGTCGAAACCTGGTGGAGGTGAAGAGTGGCTTTTGTCTCTTCGGAAACTTGAACTCGAAGAGGTGATTGATGCTCTTACCACATTGCCTGGAGTTGGTCCCAAGGTGGCAGCATGTATAGCTCTTTTTCGCTTGATCAACACAATGCCATTCCTGTTGATACACACGTGTGGAAGTCAGATTGCTACAAGATACCTCATACCTGAGCTAGCAGGGGCTCGTCTGACACCGAAGCTCTGCGGCCGCGTGGCGGAGGCATTTGTGAGTAAATATGGGAAATATGCTGGATGGGCTCAGACTCTGCTGTTTGTTGCTGAATTGCCTTCACAAAAAGCCCTCCTACCACCACATTTTTCAAATGCCAAAGAGAGTAAATCTGCAAAGGGAAAGGGCCGTGGAGTGCAGACTGTCGCGGATGCCTCAAACAGTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000702 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005739 GO:0006139 GO:0006220 GO:0006244 GO:0006259 GO:0006281 GO:0006282 GO:0006284 GO:0006285 GO:0006289 GO:0006304 GO:0006355 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0008534 GO:0009056 GO:0009058 GO:0009117 GO:0009166 GO:0009219 GO:0009223 GO:0009262 GO:0009264 GO:0009314 GO:0009394 GO:0009628 GO:0009889 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010605 GO:0016363 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016798 GO:0016799 GO:0018130 GO:0019104 GO:0019219 GO:0019222 GO:0019438 GO:0019439 GO:0019637 GO:0019692 GO:0031323 GO:0031324 GO:0031326 GO:0031974 GO:0031981 GO:0032356 GO:0032357 GO:0032991 GO:0033554 GO:0033683 GO:0034399 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045007 GO:0045008 GO:0045738 GO:0045934 GO:0046386 GO:0046434 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051252 GO:0051716 GO:0055086 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0072527 GO:0072529 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901135 GO:1901136 GO:1901291 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1903506 GO:2000112 GO:2000779 GO:2000780 GO:2001020 GO:2001021 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03410 map03410
Pfam Domains
Protein Families
HhH-GPD OGG_N

Protein Analysis

379

Amino Acids

41.31

Weight (kDa)

9.58

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OGG_N PF07934 52 - 163 3.4e-23 8-oxoguanine DNA glycosylase, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015250)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21710
fragaria_vesca FvH4_2g27490
prunus_persica Prupe.1G492700_v2.0.a1
pyrus_communis pycom15g30910
rosa_chinensis RchiOBHm_Chr6g0296321
rosa_laevigata RLG00000011706
rosa_multiflora Rmu_co8447813.1_g000001 Rmu_sc0001478.1_g000002
rosa_roxburghii Rroxscaffold_7G00171630 Rroxscaffold_7G00178450
rosa_rugosa Rorug06G0261100
rosa_samantha Rh6AG372800 Rh6BG380900 Rh6CG386100 Rh6DG373600
rosa_wichuraiana Rw6G032500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 300
AccII CGCG 2 cut(s) 951, 1118
AciI CCGC 8 cut(s) 307, 321, 398, 450, 945, 949, 956, 1118
AclWI GGATC 1 cut(s) 624
AcoI YGGCCR 3 cut(s) 202, 384, 946
AcsI RAATTY 2 cut(s) 390, 602
AcuI CTGAAG 1 cut(s) 221
AcvI CACGTG 1 cut(s) 873
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 2 cut(s) 242, 680
AfiI CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 955
AflIII ACRYGT 2 cut(s) 870, 872
AgsI TTSAA 3 cut(s) 510, 758, 1062
AhdI GACNNNNNGTC 1 cut(s) 550
AjnI CCWGG 4 cut(s) 381, 419, 715, 793
AleI CACNNNNGTG 2 cut(s) 481, 873
AluBI AGCT 7 cut(s) 99, 175, 433, 646, 827, 913, 940
AluI AGCT 7 cut(s) 99, 175, 433, 646, 827, 913, 940
Alw21I GWGCWC 4 cut(s) 177, 357, 435, 648
Alw26I GTCTC 6 cut(s) 13, 37, 214, 274, 304, 747
AlwI GGATC 1 cut(s) 624
AlwNI CAGNNNCTG 2 cut(s) 499, 1006
AoxI GGCC 6 cut(s) 202, 229, 384, 654, 946, 1096
ApeKI GCWGC 1 cut(s) 815
ApoI RAATTY 2 cut(s) 390, 602
AspLEI GCGC 1 cut(s) 455
AspS9I GGNCC 5 cut(s) 148, 230, 258, 803, 1096
AsuHPI GGTGA 4 cut(s) 154, 305, 737, 781
AsuNHI GCTAGC 1 cut(s) 913
AvaII GGWCC 3 cut(s) 148, 258, 803
BaeI ACNNNNGTAYC 2 cut(s) 857, 890
BanII GRGCYC 5 cut(s) 177, 435, 648, 925, 1000
BbrPI CACGTG 1 cut(s) 873
BbsI GAAGAC 1 cut(s) 546
Bbv12I GWGCWC 4 cut(s) 177, 357, 435, 648
BbvI GCAGC 1 cut(s) 827
BccI CCATC 3 cut(s) 76, 616, 987
BceAI ACGGC 2 cut(s) 307, 1083
BcgI CGANNNNNNTGC 6 cut(s) 320, 354, 615, 649, 690, 724
BciT130I CCWGG 4 cut(s) 383, 421, 717, 795
BclI TGATCA 1 cut(s) 840
BcoDI GTCTC 6 cut(s) 13, 37, 214, 274, 304, 747
BfaI CTAG 3 cut(s) 266, 456, 914
BfmI CTRYAG 1 cut(s) 579
BfoI RGCGCY 1 cut(s) 456
BglI GCCNNNNNGGC 1 cut(s) 347
BisI GCNGC 4 cut(s) 451, 816, 946, 949
BlsI GCNGC 4 cut(s) 452, 817, 947, 950
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 4 cut(s) 383, 421, 717, 795
Bme18I GGWCC 3 cut(s) 148, 258, 803
BmeRI GACNNNNNGTC 1 cut(s) 550
BmgT120I GGNCC 5 cut(s) 148, 230, 258, 803, 1096
BmiI GGNNCC 6 cut(s) 149, 150, 259, 260, 566, 805
BmrFI CCNGG 4 cut(s) 383, 421, 717, 795
BmrI ACTGGG 2 cut(s) 160, 569
BmsI GCATC 2 cut(s) 766, 1111
BmtI GCTAGC 1 cut(s) 917
BmuI ACTGGG 2 cut(s) 160, 569
BpiI GAAGAC 1 cut(s) 546
BpmI CTGGAG 2 cut(s) 260, 816
Bpu10I CCTNAGC 2 cut(s) 95, 909
BpuEI CTTGAG 1 cut(s) 500
BsaAI YACGTR 1 cut(s) 873
BsaHI GRCGYC 1 cut(s) 297
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 4 cut(s) 381, 612, 807, 1099
BsaWI WCCGGW 1 cut(s) 213
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 955
Bse118I RCCGGY 4 cut(s) 200, 227, 245, 656
Bse1I ACTGG 3 cut(s) 166, 564, 691
Bse3DI GCAATG 3 cut(s) 633, 701, 788
BseBI CCWGG 4 cut(s) 383, 421, 717, 795
BseDI CCNNGG 4 cut(s) 381, 612, 807, 1099
BseGI GGATG 4 cut(s) 68, 608, 998, 1126
BseLI CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 955
BseMI GCAATG 3 cut(s) 633, 701, 788
BseMII CTCAG 5 cut(s) 8, 478, 661, 900, 1013
BseNI ACTGG 3 cut(s) 166, 564, 691
BseX3I CGGCCG 1 cut(s) 946
BseXI GCAGC 1 cut(s) 827
BsgI GTGCAG 1 cut(s) 1127
Bsh1236I CGCG 2 cut(s) 951, 1118
Bsh1285I CGRYCG 1 cut(s) 949
BshFI GGCC 6 cut(s) 204, 231, 386, 656, 948, 1098
BsiEI CGRYCG 1 cut(s) 949
BsiHKAI GWGCWC 4 cut(s) 177, 357, 435, 648
BsiSI CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
BslFI GGGAC 3 cut(s) 134, 244, 789
BslI CCNNNNNNNGG 8 cut(s) 144, 145, 216, 393, 420, 722, 800, 955
BsmAI GTCTC 6 cut(s) 13, 37, 214, 274, 304, 747
BsmBI CGTCTC 1 cut(s) 304
BsmFI GGGAC 3 cut(s) 134, 244, 789
BsnI GGCC 6 cut(s) 204, 231, 386, 656, 948, 1098
Bso31I GGTCTC 1 cut(s) 13
Bsp1286I GDGCHC 6 cut(s) 177, 357, 435, 648, 925, 1000
Bsp143I GATC 2 cut(s) 616, 840
BspACI CCGC 8 cut(s) 307, 321, 398, 450, 945, 949, 956, 1118
BspANI GGCC 6 cut(s) 204, 231, 386, 656, 948, 1098
BspCNI CTCAG 5 cut(s) 9, 477, 660, 901, 1012
BspFNI CGCG 2 cut(s) 951, 1118
BspLI GGNNCC 6 cut(s) 149, 150, 259, 260, 566, 805
BspOI GCTAGC 1 cut(s) 917
BspPI GGATC 1 cut(s) 624
BspTNI GGTCTC 1 cut(s) 13
BsrDI GCAATG 3 cut(s) 633, 701, 788
BsrFI RCCGGY 4 cut(s) 200, 227, 245, 656
BsrI ACTGG 3 cut(s) 166, 564, 691
BssAI RCCGGY 4 cut(s) 200, 227, 245, 656
BssECI CCNNGG 4 cut(s) 381, 612, 807, 1099
BssMI GATC 2 cut(s) 616, 840
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 2 cut(s) 612, 807
Bst2UI CCWGG 4 cut(s) 383, 421, 717, 795
Bst4CI ACNGT 3 cut(s) 694, 1114, 1133
Bst6I CTCTTC 5 cut(s) 35, 240, 723, 750, 759
BstACI GRCGYC 1 cut(s) 297
BstBAI YACGTR 1 cut(s) 873
BstC8I GCNNGC 2 cut(s) 435, 915
BstDEI CTNAG 7 cut(s) 17, 95, 464, 647, 675, 909, 999
BstDSI CCRYGG 1 cut(s) 1099
BstENI CCTNNNNNAGG 1 cut(s) 720
BstF5I GGATG 4 cut(s) 68, 608, 998, 1126
BstFNI CGCG 2 cut(s) 951, 1118
BstH2I RGCGCY 1 cut(s) 456
BstHHI GCGC 1 cut(s) 455
BstKTI GATC 2 cut(s) 619, 843
BstMAI GTCTC 6 cut(s) 13, 37, 214, 274, 304, 747
BstMBI GATC 2 cut(s) 616, 840
BstMCI CGRYCG 1 cut(s) 949
BstMWI GCNNNNNNNGC 5 cut(s) 181, 347, 434, 824, 995
BstNI CCWGG 4 cut(s) 383, 421, 717, 795
BstNSI RCATGY 1 cut(s) 822
BstSCI CCNGG 4 cut(s) 381, 419, 715, 793
BstSFI CTRYAG 1 cut(s) 579
BstUI CGCG 2 cut(s) 951, 1118
BstV1I GCAGC 1 cut(s) 827
BstV2I GAAGAC 1 cut(s) 546
BstXI CCANNNNNNTGG 2 cut(s) 445, 541
BstZI CGGCCG 1 cut(s) 946
BsuRI GGCC 6 cut(s) 204, 231, 386, 656, 948, 1098
BtgI CCRYGG 1 cut(s) 1099
BtsCI GGATG 4 cut(s) 68, 608, 998, 1126
BtsIMutI CAGTG 4 cut(s) 8, 557, 690, 1138
Cac8I GCNNGC 2 cut(s) 435, 915
CaiI CAGNNNCTG 2 cut(s) 499, 1006
CciNI GCGGCCGC 1 cut(s) 946
CfoI GCGC 1 cut(s) 455
Cfr10I RCCGGY 4 cut(s) 200, 227, 245, 656
Cfr13I GGNCC 5 cut(s) 148, 230, 258, 803, 1096
CsiI ACCWGGT 1 cut(s) 715
Csp6I GTAC 2 cut(s) 241, 679
CviAII CATG 3 cut(s) 34, 599, 819
CviQI GTAC 2 cut(s) 241, 679
DdeI CTNAG 7 cut(s) 17, 95, 464, 647, 675, 909, 999
DpnI GATC 2 cut(s) 618, 842
DpnII GATC 2 cut(s) 616, 840
DriI GACNNNNNGTC 1 cut(s) 550
EaeI YGGCCR 3 cut(s) 202, 384, 946
EagI CGGCCG 1 cut(s) 946
Eam1104I CTCTTC 5 cut(s) 35, 240, 723, 750, 759
Eam1105I GACNNNNNGTC 1 cut(s) 550
EarI CTCTTC 5 cut(s) 35, 240, 723, 750, 759
EciI GGCGGA 2 cut(s) 310, 971
Ecl136II GAGCTC 3 cut(s) 175, 433, 646
EclXI CGGCCG 1 cut(s) 946
Eco130I CCWWGG 2 cut(s) 612, 807
Eco24I GRGCYC 5 cut(s) 177, 435, 648, 925, 1000
Eco31I GGTCTC 1 cut(s) 13
Eco47I GGWCC 3 cut(s) 148, 258, 803
Eco52I CGGCCG 1 cut(s) 946
Eco53kI GAGCTC 3 cut(s) 175, 433, 646
Eco57I CTGAAG 1 cut(s) 221
Eco72I CACGTG 1 cut(s) 873
EcoICRI GAGCTC 3 cut(s) 175, 433, 646
EcoNI CCTNNNNNAGG 1 cut(s) 720
EcoO109I RGGNCCY 2 cut(s) 148, 258
EcoRII CCWGG 4 cut(s) 381, 419, 715, 793
EcoT14I CCWWGG 2 cut(s) 612, 807
EcoT38I GRGCYC 5 cut(s) 177, 435, 648, 925, 1000
ErhI CCWWGG 2 cut(s) 612, 807
Esp3I CGTCTC 1 cut(s) 304
FaeI CATG 3 cut(s) 37, 602, 822
FaiI YATR 8 cut(s) 35, 600, 669, 820, 824, 905, 978, 987
FalI AAGNNNNNCTT 4 cut(s) 462, 494, 720, 752
FaqI GGGAC 3 cut(s) 134, 244, 789
FatI CATG 3 cut(s) 33, 598, 818
FbaI TGATCA 1 cut(s) 840
Fnu4HI GCNGC 4 cut(s) 451, 816, 946, 949
FokI GGATG 4 cut(s) 55, 595, 1005, 1133
FriOI GRGCYC 5 cut(s) 177, 435, 648, 925, 1000
Fsp4HI GCNGC 4 cut(s) 451, 816, 946, 949
FspBI CTAG 3 cut(s) 266, 456, 914
GlaI GCGC 1 cut(s) 454
GluI GCNGC 4 cut(s) 451, 816, 946, 949
GsuI CTGGAG 2 cut(s) 260, 816
HaeII RGCGCY 1 cut(s) 456
HaeIII GGCC 6 cut(s) 204, 231, 386, 656, 948, 1098
HapII CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
HhaI GCGC 1 cut(s) 455
Hin1I GRCGYC 1 cut(s) 297
Hin1II CATG 3 cut(s) 37, 602, 822
Hin6I GCGC 1 cut(s) 453
HinP1I GCGC 1 cut(s) 453
HinfI GANTC 5 cut(s) 332, 344, 416, 490, 1003
HpaII CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
HphI GGTGA 4 cut(s) 154, 305, 737, 781
Hpy166II GTNNAC 2 cut(s) 243, 544
Hpy8I GTNNAC 2 cut(s) 243, 544
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 4 cut(s) 220, 320, 691, 1038
HpyCH4III ACNGT 3 cut(s) 694, 1114, 1133
HpyCH4IV ACGT 2 cut(s) 297, 872
HpyCH4V TGCA 3 cut(s) 706, 1085, 1108
HpyF10VI GCNNNNNNNGC 5 cut(s) 181, 347, 434, 824, 995
HpyF3I CTNAG 7 cut(s) 17, 95, 464, 647, 675, 909, 999
HpySE526I ACGT 2 cut(s) 297, 872
Hsp92I GRCGYC 1 cut(s) 297
Hsp92II CATG 3 cut(s) 37, 602, 822
HspAI GCGC 1 cut(s) 453
KflI GGGWCCC 2 cut(s) 148, 258
Ksp22I TGATCA 1 cut(s) 840
Kzo9I GATC 2 cut(s) 616, 840
LmnI GCTCC 2 cut(s) 104, 172
Lsp1109I GCAGC 1 cut(s) 827
LweI GCATC 2 cut(s) 766, 1111
MabI ACCWGGT 1 cut(s) 715
MaeI CTAG 3 cut(s) 266, 456, 914
MaeII ACGT 2 cut(s) 297, 872
MalI GATC 2 cut(s) 618, 842
MboI GATC 2 cut(s) 616, 840
MboII GAAGA 8 cut(s) 49, 52, 227, 498, 546, 737, 740, 776
MhlI GDGCHC 6 cut(s) 177, 357, 435, 648, 925, 1000
MluCI AATT 4 cut(s) 390, 528, 602, 1022
MlyI GAGTC 3 cut(s) 341, 353, 997
MmeI TCCRAC 3 cut(s) 104, 150, 615
MseI TTAA 1 cut(s) 683
MslI CAYNNNNRTG 2 cut(s) 481, 873
MspI CCGG 6 cut(s) 201, 214, 228, 246, 387, 657
MspR9I CCNGG 4 cut(s) 383, 421, 717, 795
MvaI CCWGG 4 cut(s) 383, 421, 717, 795
MvnI CGCG 2 cut(s) 951, 1118
MwoI GCNNNNNNNGC 5 cut(s) 181, 347, 434, 824, 995
NdeII GATC 2 cut(s) 616, 840
NheI GCTAGC 1 cut(s) 913
NlaIII CATG 3 cut(s) 37, 602, 822
NlaIV GGNNCC 6 cut(s) 149, 150, 259, 260, 566, 805
NmeAIII GCCGAG 3 cut(s) 367, 386, 454
NotI GCGGCCGC 1 cut(s) 946
NspI RCATGY 1 cut(s) 822
OliI CACNNNNGTG 2 cut(s) 481, 873
PfeI GAWTC 2 cut(s) 416, 490
PkrI GCNGC 4 cut(s) 452, 817, 947, 950
PleI GAGTC 3 cut(s) 340, 352, 997
PmaCI CACGTG 1 cut(s) 873
PmlI CACGTG 1 cut(s) 873
PpsI GAGTC 3 cut(s) 340, 352, 997
Ppu21I YACGTR 1 cut(s) 873
PpuMI RGGWCCY 2 cut(s) 148, 258
Psp124BI GAGCTC 3 cut(s) 177, 435, 648
Psp5II RGGWCCY 2 cut(s) 148, 258
Psp6I CCWGG 4 cut(s) 381, 419, 715, 793
PspCI CACGTG 1 cut(s) 873
PspGI CCWGG 4 cut(s) 381, 419, 715, 793
PspN4I GGNNCC 6 cut(s) 149, 150, 259, 260, 566, 805
PspPI GGNCC 5 cut(s) 148, 230, 258, 803, 1096
PspPPI RGGWCCY 2 cut(s) 148, 258
PstNI CAGNNNCTG 2 cut(s) 499, 1006
RsaI GTAC 2 cut(s) 242, 680
RsaNI GTAC 2 cut(s) 241, 679
RseI CAYNNNNRTG 2 cut(s) 481, 873
SacI GAGCTC 3 cut(s) 177, 435, 648
SaqAI TTAA 1 cut(s) 683
SatI GCNGC 4 cut(s) 451, 816, 946, 949
Sau3AI GATC 2 cut(s) 616, 840
Sau96I GGNCC 5 cut(s) 148, 230, 258, 803, 1096
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 3 cut(s) 341, 353, 997
ScrFI CCNGG 4 cut(s) 383, 421, 717, 795
SduI GDGCHC 6 cut(s) 177, 357, 435, 648, 925, 1000
SexAI ACCWGGT 1 cut(s) 715
SfaNI GCATC 2 cut(s) 766, 1111
SfcI CTRYAG 1 cut(s) 579
SgrAI CRCCGGYG 1 cut(s) 245
SinI GGWCC 3 cut(s) 148, 258, 803
SmiMI CAYNNNNRTG 2 cut(s) 481, 873
SmlI CTYRAG 1 cut(s) 479
SmoI CTYRAG 1 cut(s) 479
Sse9I AATT 4 cut(s) 390, 528, 602, 1022
SsiI CCGC 8 cut(s) 307, 321, 398, 450, 945, 949, 956, 1118
SspMI CTAG 3 cut(s) 266, 456, 914
SstI GAGCTC 3 cut(s) 177, 435, 648
StyD4I CCNGG 4 cut(s) 381, 419, 715, 793
StyI CCWWGG 2 cut(s) 612, 807
TaaI ACNGT 3 cut(s) 694, 1114, 1133
TaiI ACGT 2 cut(s) 300, 875
TaqI TCGA 3 cut(s) 357, 710, 762
TasI AATT 4 cut(s) 390, 528, 602, 1022
TatI WGTACW 2 cut(s) 240, 678
TauI GCSGC 3 cut(s) 453, 948, 951
TfiI GAWTC 2 cut(s) 416, 490
Tru1I TTAA 1 cut(s) 683
Tru9I TTAA 1 cut(s) 683
TscAI CASTG 4 cut(s) 15, 564, 697, 1138
TseI GCWGC 1 cut(s) 815
TspDTI ATGAA 2 cut(s) 50, 615
TspRI CASTG 4 cut(s) 15, 564, 697, 1138
VpaK11BI GGWCC 3 cut(s) 148, 258, 803
XagI CCTNNNNNAGG 1 cut(s) 720
XapI RAATTY 2 cut(s) 390, 602
XceI RCATGY 1 cut(s) 822
XspI CTAG 3 cut(s) 266, 456, 914
ZraI GACGTC 1 cut(s) 298
ZrmI AGTACT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.