RchiOBHm_Chr6g0299071

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0008646
Physical Location & Seq
Reverse (-)
60305587 .. 60312997
7411 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26852

Sequence Viewer

Length: 2229 bp
ATGCTGCCGATGAGGAATGTCTTTGCCACTGTCAAGCGTCACCGCCATGCCACTCTCCTCTCCCAAACTCTATGCCATGAAATTTATGTGGAGACCATAATACAGAAATGCATACCTTTGGGATGCCACAAGTTTATTGAAATTGGATGGAAACAACACAATGGGTCTCCATATTACTGGCTACAACGACATTCTTTTTCCACGGGCTTCACCAGCGTGCACGGTGACAGTCCGTCCGCCGAATATGCAAAGTTGAGGAAGGAGTCATTAGAAAGTGAATTTGGACATGCTCTTGGAGCTAATCGCTCCAGAAGTTTTTCTGCTGCCTACCGTTTTGGTCCATTTTTGGCTTTGTATAGAGCAGCAATTATTTCGTTTCACGTGTTGAAGCTAACAATCTGGCAATTCTTTGTTCAAGACATAAGGAAACGTGCCATCAAGTTTCGTGAAACTCTTATCCGCTTGGGACCTTTCTATATCAAGCTTGGTCAGGCTTTGAGCACTAGGCCAGATATACTACCAACTGAATACTGCCAAGAGCTTGTTAAGTTACAGGATCAAATACCCCCATTTCCAACCCCTGTAGCTATTAAATCTATTGAATCCCAGCTTGGAGTTCGTGTTTCAGACATTTTTGCTGATATTAGCCCACAGCCTATTGCTGCAGCATCCCTAGGGCAGGTCTATAAAGCTCACCTGCACTCTGGGGAGCTGGTAGCTGTTAAAGTACAAAGGCCTGGCATGTCACTTTCATTGACCCTTGATGCCTTGTTATTCCATATGATTGGGGGCCAATTAAAGCGATTTGCCGAGGCCCGCAAAGATCTATTAGTGGCAGTGAATGAGATGGTGAGGCACATGTTTGATGAAATTGATTACATTCTAGAGGCAAAAAATGCTGAACGTTTTGCTTCTCTCTATGCTTCACATCCACGTGATGAGAAAAAGGATTATCCAAATGCTACAGCTGGGAAAACTAGTAGACATAAAGAGGCAAACTGTATAAAAGTGCCAAAAATATATTGGGACCTTACCCGAAGGGCAGTGCTGACAATGGAGTGGATTGATGGAATAAAGCTTACAGATGAAATTGGCCTAAAGACGGCCTTTCTGAACAGAAAAGAACTCATTGACCAGGGATTATACTGTTCTTTGAGACAACTGCTTGAGGTGGGATTCTTCCATGCTGACCCACATCCTGGTAATCTTGTTGCCACTGATAGTGGTGCTCTTGCATATTTTGATTTTGGAATGATGGGTGATATTCCGCGACATTATCGCGTGGGGCTTATTCAAATGCTTGTGCACTTTGTTAATCGTGACTCTCTGGGTTTGGCAAATGACTTTCTTTCGTTGGGATTTATTCCTGAAGGGGTTGATATACAACCAGTTGCAGATGCAATGAAAGCATCCTTTAGTGACAGGAACAGACAATCTCAAGATTTTCAGGGAATAATGGACCAACTATACGATATTATGTATGAATTCAACTTCTCTCTTCCTCCGGACTATGCCCTGGTGATAAGGGCTCTGGGATCACTGGAAGGCACGGCCAAAGTTCTGGATCCTGATTTCAAAGTTGTTGAGAGTGCATATCCTTTTGTGGTTGGAAGACTTTTGGCTGACCCAAATCCTGATATGAGAAGAATTTTAAGAGAACTTCTCATATGCAGTGATGGATCCATAAGGTGGAATAGGCTAGAACGCCTGGTTGCAGCAATATCTGAACAGGCTTCTGAGTCTGTTAGAGAGTCCCCTAATTTGGAGGAGAGTAGTACTCCTAATCCTTTGAGAAGGAAATCATTTGACATGCATGCTGTTGTTGCCGCCACTGAAGATCTTTTACACTTCATTCTCTCTGCGAAGGGTCAAAGGGTACGTGTATTCCTTGTTCGGGATATAATTGGTGCAGCTGATGCTTTTTTTCAGGATGAAGTTGTTGGTAACATGTTCAATGACAATCCCGAAGCCAGAGACACACTTGACTCAGAGGGACATACCATGCTCGTGAGGGTGGTAAATGGGTTTCACTATTTCAGTCAAGCTGTAAAGTTGGCCCCAGAGGAGTGGACAGCAATGCTTATACGCGTGGCGTTTACACCAGAGGTTCATAGGTTTACTTTAGATATCTTTTCGTCGCTACTCATTCATTTTAGTGGCAAAATCCCAGAAACTACTTTCATTTCTCTATCTAGACTTATGCACAAGTTGGTAAAAAACCGCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

742

Amino Acids

84.11

Weight (kDa)

7.72

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 183 - 446 3.1e-70 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 705
Acc36I ACCTGC 2 cut(s) 670, 705
AccB7I CCANNNNNTGG 2 cut(s) 1199, 1689
AccI GTMKAC 1 cut(s) 982
AccII CGCG 3 cut(s) 1270, 1281, 2088
AccIII TCCGGA 1 cut(s) 1504
AciI CCGC 7 cut(s) 43, 237, 460, 817, 1268, 1827, 2221
AclI AACGTT 1 cut(s) 904
AclWI GGATC 6 cut(s) 564, 1543, 1559, 1572, 1674, 1687
AcoI YGGCCR 1 cut(s) 1551
AcsI RAATTY 4 cut(s) 81, 278, 1484, 1647
AcuI CTGAAG 2 cut(s) 1389, 1854
AcvI CACGTG 2 cut(s) 382, 935
AfaI GTAC 3 cut(s) 729, 1777, 1878
AfiI CCNNNNNNNGG 6 cut(s) 679, 1102, 1199, 1689, 1762, 1894
AflIII ACRYGT 5 cut(s) 381, 858, 1879, 1947, 2086
AgsI TTSAA 8 cut(s) 140, 388, 416, 602, 1295, 1489, 1576, 1954
AhdI GACNNNNNGTC 1 cut(s) 232
AhlI ACTAGT 1 cut(s) 977
AjnI CCWGG 5 cut(s) 736, 1134, 1198, 1515, 1707
AjuI GAANNNNNNNTTGG 4 cut(s) 264, 296, 594, 626
AleI CACNNNNGTG 1 cut(s) 215
Alw21I GWGCWC 4 cut(s) 222, 503, 1231, 1308
Alw26I GTCTC 4 cut(s) 86, 171, 1150, 1968
Alw44I GTGCAC 2 cut(s) 218, 1304
AlwI GGATC 6 cut(s) 564, 1543, 1559, 1572, 1674, 1687
Aor13HI TCCGGA 1 cut(s) 1504
AoxI GGCC 8 cut(s) 506, 734, 790, 813, 1093, 1104, 1551, 2055
ApaLI GTGCAC 2 cut(s) 218, 1304
ApeKI GCWGC 8 cut(s) 4, 323, 362, 662, 665, 1715, 1910, 2223
ApoI RAATTY 4 cut(s) 81, 278, 1484, 1647
Asp700I GAANNNNTTC 1 cut(s) 316
AspA2I CCTAGG 1 cut(s) 673
AspS9I GGNCC 7 cut(s) 338, 467, 790, 814, 1027, 1459, 2056
AsuHPI GGTGA 7 cut(s) 32, 202, 236, 686, 862, 1271, 1531
AvaII GGWCC 4 cut(s) 338, 467, 1027, 1459
AvrII CCTAGG 1 cut(s) 673
BaeGI GKGCMC 2 cut(s) 222, 1308
BamHI GGATCC 2 cut(s) 1564, 1679
BanII GRGCYC 1 cut(s) 1531
BarI GAAGNNNNNNTAC 2 cut(s) 1827, 1859
BauI CACGAG 1 cut(s) 2006
BbrPI CACGTG 2 cut(s) 382, 935
BbsI GAAGAC 1 cut(s) 1618
Bbv12I GWGCWC 4 cut(s) 222, 503, 1231, 1308
BbvI GCAGC 6 cut(s) 310, 374, 649, 677, 1727, 1922
BccI CCATC 6 cut(s) 141, 443, 841, 1061, 1249, 1670
BceAI ACGGC 2 cut(s) 1119, 1566
BcgI CGANNNNNNTGC 2 cut(s) 354, 388
BciT130I CCWGG 5 cut(s) 738, 1136, 1200, 1517, 1709
BcoDI GTCTC 4 cut(s) 86, 171, 1150, 1968
BcuI ACTAGT 1 cut(s) 977
BfaI CTAG 6 cut(s) 504, 674, 884, 978, 1700, 2193
BfmI CTRYAG 3 cut(s) 582, 663, 963
BfuAI ACCTGC 2 cut(s) 670, 705
BglII AGATCT 2 cut(s) 823, 1837
BisI GCNGC 9 cut(s) 5, 324, 363, 663, 666, 1716, 1827, 1911, 2224
BlnI CCTAGG 1 cut(s) 673
BlsI GCNGC 9 cut(s) 6, 325, 364, 664, 667, 1717, 1828, 1912, 2225
BmcAI AGTACT 1 cut(s) 1777
Bme1390I CCNGG 5 cut(s) 738, 1136, 1200, 1517, 1709
Bme18I GGWCC 4 cut(s) 338, 467, 1027, 1459
BmeRI GACNNNNNGTC 1 cut(s) 232
BmgT120I GGNCC 7 cut(s) 338, 467, 790, 814, 1027, 1459, 2056
BmiI GGNNCC 6 cut(s) 468, 791, 1028, 1566, 1681, 2058
BmrFI CCNGG 5 cut(s) 738, 1136, 1200, 1517, 1709
BmsI GCATC 6 cut(s) 113, 677, 754, 1387, 1418, 1906
BpiI GAAGAC 1 cut(s) 1618
BplI GAGNNNNNCTC 4 cut(s) 1647, 1679, 1762, 1794
BpmI CTGGAG 1 cut(s) 292
BpuEI CTTGAG 2 cut(s) 1187, 1422
BsaAI YACGTR 3 cut(s) 382, 935, 1880
BsaI GGTCTC 2 cut(s) 86, 171
BsaJI CCNNGG 5 cut(s) 201, 673, 810, 1135, 1515
BsaWI WCCGGW 1 cut(s) 1504
BsaXI ACNNNNNCTCC 2 cut(s) 606, 636
Bsc4I CCNNNNNNNGG 6 cut(s) 679, 1102, 1199, 1689, 1762, 1894
Bse1I ACTGG 3 cut(s) 182, 1388, 1545
Bse3DI GCAATG 2 cut(s) 1407, 2082
BseAI TCCGGA 1 cut(s) 1504
BseBI CCWGG 5 cut(s) 738, 1136, 1200, 1517, 1709
BseDI CCNNGG 5 cut(s) 201, 673, 810, 1135, 1515
BseGI GGATG 7 cut(s) 128, 152, 668, 928, 1195, 1409, 1936
BseLI CCNNNNNNNGG 6 cut(s) 679, 1102, 1199, 1689, 1762, 1894
BseMI GCAATG 2 cut(s) 1407, 2082
BseMII CTCAG 2 cut(s) 1728, 2001
BseNI ACTGG 3 cut(s) 182, 1388, 1545
BseRI GAGGAG 3 cut(s) 47, 1781, 2078
BseSI GKGCMC 2 cut(s) 222, 1308
BseXI GCAGC 6 cut(s) 310, 374, 649, 677, 1727, 1922
BseYI CCCAGC 2 cut(s) 606, 968
BsgI GTGCAG 2 cut(s) 683, 1929
Bsh1236I CGCG 3 cut(s) 1270, 1281, 2088
BshFI GGCC 8 cut(s) 508, 736, 792, 815, 1095, 1106, 1553, 2057
BsiHKAI GWGCWC 4 cut(s) 222, 503, 1231, 1308
BsiSI CCGG 1 cut(s) 1505
BslFI GGGAC 4 cut(s) 480, 1040, 1738, 2007
BslI CCNNNNNNNGG 6 cut(s) 679, 1102, 1199, 1689, 1762, 1894
BsmAI GTCTC 4 cut(s) 86, 171, 1150, 1968
BsmFI GGGAC 4 cut(s) 480, 1040, 1738, 2007
BsnI GGCC 8 cut(s) 508, 736, 792, 815, 1095, 1106, 1553, 2057
Bso31I GGTCTC 2 cut(s) 86, 171
Bsp1286I GDGCHC 5 cut(s) 222, 503, 1231, 1308, 1531
Bsp13I TCCGGA 1 cut(s) 1504
Bsp143I GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
BspACI CCGC 7 cut(s) 43, 237, 460, 817, 1268, 1827, 2221
BspANI GGCC 8 cut(s) 508, 736, 792, 815, 1095, 1106, 1553, 2057
BspCNI CTCAG 2 cut(s) 1729, 2000
BspEI TCCGGA 1 cut(s) 1504
BspFNI CGCG 3 cut(s) 1270, 1281, 2088
BspLI GGNNCC 6 cut(s) 468, 791, 1028, 1566, 1681, 2058
BspMAI CTGCAG 1 cut(s) 667
BspMI ACCTGC 2 cut(s) 670, 705
BspPI GGATC 6 cut(s) 564, 1543, 1559, 1572, 1674, 1687
BspTNI GGTCTC 2 cut(s) 86, 171
BsrDI GCAATG 2 cut(s) 1407, 2082
BsrI ACTGG 3 cut(s) 182, 1388, 1545
BssECI CCNNGG 5 cut(s) 201, 673, 810, 1135, 1515
BssMI GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
BssSI CACGAG 1 cut(s) 2006
BssT1I CCWWGG 1 cut(s) 673
Bst2BI CACGAG 1 cut(s) 2006
Bst2UI CCWGG 5 cut(s) 738, 1136, 1200, 1517, 1709
Bst4CI ACNGT 6 cut(s) 31, 224, 230, 332, 1001, 1148
Bst6I CTCTTC 1 cut(s) 1503
BstAPI GCANNNNNTGC 2 cut(s) 896, 1916
BstBAI YACGTR 3 cut(s) 382, 935, 1880
BstC8I GCNNGC 3 cut(s) 218, 817, 1815
BstDEI CTNAG 2 cut(s) 1737, 1987
BstDSI CCRYGG 1 cut(s) 201
BstENI CCTNNNNNAGG 1 cut(s) 677
BstF5I GGATG 7 cut(s) 128, 152, 668, 928, 1195, 1409, 1936
BstFNI CGCG 3 cut(s) 1270, 1281, 2088
BstKTI GATC 6 cut(s) 559, 826, 1538, 1567, 1682, 1840
BstMAI GTCTC 4 cut(s) 86, 171, 1150, 1968
BstMBI GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
BstMWI GCNNNNNNNGC 7 cut(s) 213, 245, 296, 896, 1406, 1823, 1916
BstNI CCWGG 5 cut(s) 738, 1136, 1200, 1517, 1709
BstNSI RCATGY 6 cut(s) 290, 745, 862, 1813, 1817, 1951
BstSCI CCNGG 5 cut(s) 736, 1134, 1198, 1515, 1707
BstSFI CTRYAG 3 cut(s) 582, 663, 963
BstSLI GKGCMC 2 cut(s) 222, 1308
BstUI CGCG 3 cut(s) 1270, 1281, 2088
BstV1I GCAGC 6 cut(s) 310, 374, 649, 677, 1727, 1922
BstV2I GAAGAC 1 cut(s) 1618
BstX2I RGATCY 4 cut(s) 823, 1564, 1679, 1837
BstXI CCANNNNNNTGG 4 cut(s) 177, 785, 1561, 2067
BstYI RGATCY 4 cut(s) 823, 1564, 1679, 1837
BsuRI GGCC 8 cut(s) 508, 736, 792, 815, 1095, 1106, 1553, 2057
BtgI CCRYGG 1 cut(s) 201
BtsCI GGATG 7 cut(s) 128, 152, 668, 928, 1195, 1409, 1936
BtsI GCAGTG 3 cut(s) 843, 1050, 1678
BtsIMutI CAGTG 7 cut(s) 27, 843, 1050, 1215, 1538, 1678, 1830
BveI ACCTGC 2 cut(s) 670, 705
Cac8I GCNNGC 3 cut(s) 218, 817, 1815
Cfr13I GGNCC 7 cut(s) 338, 467, 790, 814, 1027, 1459, 2056
CseI GACGC 1 cut(s) 26
Csp6I GTAC 3 cut(s) 728, 1776, 1877
CviQI GTAC 3 cut(s) 728, 1776, 1877
DdeI CTNAG 2 cut(s) 1737, 1987
DpnI GATC 6 cut(s) 558, 825, 1537, 1566, 1681, 1839
DpnII GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
DriI GACNNNNNGTC 1 cut(s) 232
EaeI YGGCCR 1 cut(s) 1551
Eam1104I CTCTTC 1 cut(s) 1503
Eam1105I GACNNNNNGTC 1 cut(s) 232
EarI CTCTTC 1 cut(s) 1503
EciI GGCGGA 1 cut(s) 226
Eco130I CCWWGG 1 cut(s) 673
Eco147I AGGCCT 1 cut(s) 736
Eco24I GRGCYC 1 cut(s) 1531
Eco31I GGTCTC 2 cut(s) 86, 171
Eco32I GATATC 1 cut(s) 2128
Eco47I GGWCC 4 cut(s) 338, 467, 1027, 1459
Eco57I CTGAAG 2 cut(s) 1389, 1854
Eco72I CACGTG 2 cut(s) 382, 935
EcoNI CCTNNNNNAGG 1 cut(s) 677
EcoO109I RGGNCCY 2 cut(s) 467, 1027
EcoRI GAATTC 1 cut(s) 1484
EcoRII CCWGG 5 cut(s) 736, 1134, 1198, 1515, 1707
EcoRV GATATC 1 cut(s) 2128
EcoT14I CCWWGG 1 cut(s) 673
EcoT22I ATGCAT 2 cut(s) 113, 1815
EcoT38I GRGCYC 1 cut(s) 1531
ErhI CCWWGG 1 cut(s) 673
FalI AAGNNNNNCTT 2 cut(s) 1091, 1123
FaqI GGGAC 4 cut(s) 480, 1040, 1738, 2007
FauI CCCGC 1 cut(s) 824
FauNDI CATATG 2 cut(s) 780, 1667
FblI GTMKAC 1 cut(s) 982
Fnu4HI GCNGC 9 cut(s) 5, 324, 363, 663, 666, 1716, 1827, 1911, 2224
FokI GGATG 7 cut(s) 135, 159, 655, 915, 1182, 1396, 1943
FriOI GRGCYC 1 cut(s) 1531
Fsp4HI GCNGC 9 cut(s) 5, 324, 363, 663, 666, 1716, 1827, 1911, 2224
FspBI CTAG 6 cut(s) 504, 674, 884, 978, 1700, 2193
GluI GCNGC 9 cut(s) 5, 324, 363, 663, 666, 1716, 1827, 1911, 2224
GsaI CCCAGC 2 cut(s) 610, 972
GsuI CTGGAG 1 cut(s) 292
HaeIII GGCC 8 cut(s) 508, 736, 792, 815, 1095, 1106, 1553, 2057
HapII CCGG 1 cut(s) 1505
HgaI GACGC 1 cut(s) 26
HindIII AAGCTT 2 cut(s) 482, 1076
HinfI GANTC 7 cut(s) 263, 602, 1176, 1322, 1739, 1751, 1985
HpaII CCGG 1 cut(s) 1505
HphI GGTGA 7 cut(s) 32, 202, 236, 686, 862, 1271, 1531
Hpy166II GTNNAC 6 cut(s) 220, 983, 1306, 2070, 2097, 2118
Hpy188I TCNGA 5 cut(s) 628, 1113, 1726, 1738, 1990
Hpy8I GTNNAC 6 cut(s) 220, 983, 1306, 2070, 2097, 2118
Hpy99I CGWCG 1 cut(s) 2140
HpyAV CCTTC 6 cut(s) 253, 1032, 1364, 1538, 1788, 1858
HpyCH4III ACNGT 6 cut(s) 31, 224, 230, 332, 1001, 1148
HpyCH4IV ACGT 5 cut(s) 381, 430, 904, 934, 1879
HpyF10VI GCNNNNNNNGC 7 cut(s) 213, 245, 296, 896, 1406, 1823, 1916
HpyF3I CTNAG 2 cut(s) 1737, 1987
HpySE526I ACGT 5 cut(s) 381, 430, 904, 934, 1879
Kpn2I TCCGGA 1 cut(s) 1504
Kzo9I GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
LmnI GCTCC 3 cut(s) 296, 311, 709
Lsp1109I GCAGC 6 cut(s) 310, 374, 649, 677, 1727, 1922
LweI GCATC 6 cut(s) 113, 677, 754, 1387, 1418, 1906
MaeI CTAG 6 cut(s) 504, 674, 884, 978, 1700, 2193
MaeII ACGT 5 cut(s) 381, 430, 904, 934, 1879
MaeIII GTNAC 7 cut(s) 38, 224, 549, 744, 1319, 1418, 1943
MalI GATC 6 cut(s) 558, 825, 1537, 1566, 1681, 1839
MboI GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
MboII GAAGA 5 cut(s) 1171, 1490, 1623, 1656, 1847
MflI RGATCY 4 cut(s) 823, 1564, 1679, 1837
MhlI GDGCHC 5 cut(s) 222, 503, 1231, 1308, 1531
MluI ACGCGT 1 cut(s) 2086
MlyI GAGTC 5 cut(s) 272, 1316, 1748, 1760, 1979
MmeI TCCRAC 2 cut(s) 599, 1588
Mph1103I ATGCAT 2 cut(s) 113, 1815
MroI TCCGGA 1 cut(s) 1504
MroXI GAANNNNTTC 1 cut(s) 316
MseI TTAA 6 cut(s) 546, 591, 723, 797, 1314, 1652
MslI CAYNNNNRTG 5 cut(s) 45, 215, 933, 2006, 2154
MspA1I CMGCKG 2 cut(s) 968, 1913
MspI CCGG 1 cut(s) 1505
MspR9I CCNGG 5 cut(s) 738, 1136, 1200, 1517, 1709
MvaI CCWGG 5 cut(s) 738, 1136, 1200, 1517, 1709
MvnI CGCG 3 cut(s) 1270, 1281, 2088
MwoI GCNNNNNNNGC 7 cut(s) 213, 245, 296, 896, 1406, 1823, 1916
NdeI CATATG 2 cut(s) 780, 1667
NdeII GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
NlaIV GGNNCC 6 cut(s) 468, 791, 1028, 1566, 1681, 2058
NmeAIII GCCGAG 1 cut(s) 835
NmuCI GTSAC 5 cut(s) 38, 224, 744, 1319, 1418
NsiI ATGCAT 2 cut(s) 113, 1815
NspI RCATGY 6 cut(s) 290, 745, 862, 1813, 1817, 1951
OliI CACNNNNGTG 1 cut(s) 215
PaeI GCATGC 1 cut(s) 1817
PaqCI CACCTGC 1 cut(s) 705
PceI AGGCCT 1 cut(s) 736
PciI ACATGT 2 cut(s) 858, 1947
PdmI GAANNNNTTC 1 cut(s) 316
PfeI GAWTC 2 cut(s) 602, 1176
PflMI CCANNNNNTGG 2 cut(s) 1199, 1689
PkrI GCNGC 9 cut(s) 6, 325, 364, 664, 667, 1717, 1828, 1912, 2225
PleI GAGTC 5 cut(s) 271, 1316, 1747, 1759, 1979
PmaCI CACGTG 2 cut(s) 382, 935
PmlI CACGTG 2 cut(s) 382, 935
PpsI GAGTC 5 cut(s) 271, 1316, 1747, 1759, 1979
Ppu21I YACGTR 3 cut(s) 382, 935, 1880
PpuMI RGGWCCY 2 cut(s) 467, 1027
PscI ACATGT 2 cut(s) 858, 1947
Psp1406I AACGTT 1 cut(s) 904
Psp5II RGGWCCY 2 cut(s) 467, 1027
Psp6I CCWGG 5 cut(s) 736, 1134, 1198, 1515, 1707
PspCI CACGTG 2 cut(s) 382, 935
PspFI CCCAGC 2 cut(s) 606, 968
PspGI CCWGG 5 cut(s) 736, 1134, 1198, 1515, 1707
PspN4I GGNNCC 6 cut(s) 468, 791, 1028, 1566, 1681, 2058
PspPI GGNCC 7 cut(s) 338, 467, 790, 814, 1027, 1459, 2056
PspPPI RGGWCCY 2 cut(s) 467, 1027
PsrI GAACNNNNNNTAC 2 cut(s) 1875, 1907
PstI CTGCAG 1 cut(s) 667
PsuI RGATCY 4 cut(s) 823, 1564, 1679, 1837
PvuII CAGCTG 2 cut(s) 968, 1913
RsaI GTAC 3 cut(s) 729, 1777, 1878
RsaNI GTAC 3 cut(s) 728, 1776, 1877
RseI CAYNNNNRTG 5 cut(s) 45, 215, 933, 2006, 2154
SaqAI TTAA 6 cut(s) 546, 591, 723, 797, 1314, 1652
SatI GCNGC 9 cut(s) 5, 324, 363, 663, 666, 1716, 1827, 1911, 2224
Sau3AI GATC 6 cut(s) 556, 823, 1535, 1564, 1679, 1837
Sau96I GGNCC 7 cut(s) 338, 467, 790, 814, 1027, 1459, 2056
ScaI AGTACT 1 cut(s) 1777
SchI GAGTC 5 cut(s) 272, 1316, 1748, 1760, 1979
ScrFI CCNGG 5 cut(s) 738, 1136, 1200, 1517, 1709
SduI GDGCHC 5 cut(s) 222, 503, 1231, 1308, 1531
SfaNI GCATC 6 cut(s) 113, 677, 754, 1387, 1418, 1906
SfcI CTRYAG 3 cut(s) 582, 663, 963
SinI GGWCC 4 cut(s) 338, 467, 1027, 1459
SmiMI CAYNNNNRTG 5 cut(s) 45, 215, 933, 2006, 2154
SmlI CTYRAG 2 cut(s) 1166, 1437
SmoI CTYRAG 2 cut(s) 1166, 1437
SpeI ACTAGT 1 cut(s) 977
SphI GCATGC 1 cut(s) 1817
SseBI AGGCCT 1 cut(s) 736
SsiI CCGC 7 cut(s) 43, 237, 460, 817, 1268, 1827, 2221
SspMI CTAG 6 cut(s) 504, 674, 884, 978, 1700, 2193
StuI AGGCCT 1 cut(s) 736
StyD4I CCNGG 5 cut(s) 736, 1134, 1198, 1515, 1707
StyI CCWWGG 1 cut(s) 673
TaaI ACNGT 6 cut(s) 31, 224, 230, 332, 1001, 1148
TaiI ACGT 5 cut(s) 384, 433, 907, 937, 1882
TatI WGTACW 2 cut(s) 727, 1775
TauI GCSGC 1 cut(s) 1829
TfiI GAWTC 2 cut(s) 602, 1176
Tru1I TTAA 6 cut(s) 546, 591, 723, 797, 1314, 1652
Tru9I TTAA 6 cut(s) 546, 591, 723, 797, 1314, 1652
TscAI CASTG 7 cut(s) 34, 843, 1050, 1222, 1545, 1678, 1837
TseFI GTSAC 5 cut(s) 38, 224, 744, 1319, 1418
TseI GCWGC 8 cut(s) 4, 323, 362, 662, 665, 1715, 1910, 2223
Tsp45I GTSAC 5 cut(s) 38, 224, 744, 1319, 1418
TspGWI ACGGA 1 cut(s) 222
TspRI CASTG 7 cut(s) 34, 843, 1050, 1222, 1545, 1678, 1837
Van91I CCANNNNNTGG 2 cut(s) 1199, 1689
VneI GTGCAC 2 cut(s) 218, 1304
VpaK11BI GGWCC 4 cut(s) 338, 467, 1027, 1459
XagI CCTNNNNNAGG 1 cut(s) 677
XapI RAATTY 4 cut(s) 81, 278, 1484, 1647
XbaI TCTAGA 2 cut(s) 883, 2192
XceI RCATGY 6 cut(s) 290, 745, 862, 1813, 1817, 1951
XcmI CCANNNNNNNNNTGG 1 cut(s) 1020
XmaJI CCTAGG 1 cut(s) 673
XmiI GTMKAC 1 cut(s) 982
XmnI GAANNNNTTC 1 cut(s) 316
XspI CTAG 6 cut(s) 504, 674, 884, 978, 1700, 2193
ZrmI AGTACT 1 cut(s) 1777
Zsp2I ATGCAT 2 cut(s) 113, 1815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.