Rroxscaffold_7G00169030

AarF domain-containing protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0008646
Physical Location & Seq
Forward (+)
9726210 .. 9733454
7245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169030.1

Sequence Viewer

Length: 2292 bp
ATGCAGGATGAAACTATAATCCAATTGCTTAATTCTCTTGATTTTTTGCTTAATCATATAGGCAAATACATACATCCATACATAGACAGCATAGCTCTATGCCATGAAATTTATGTGGAGACCGTCATACAGAAATGCCTACCTTTGGGATGCCACAAGTTTATTGAAATCGGATGGAAACAACACAATGGGTCTCCATATTACTGGCTACAACGACATTCTTTTTCCACGGGTTTCACCAGCGTGCACGGTGAGAGTCCGTCTGCGGAATATGCAAAGTTGAGGAAGGAGTCACTAGAAAGTGAATTTGGACATGCTCTTGGAGCTAATCGCTCCAGAAGTTTTTCTGCTGCCTACCGTTTTGGTCCATTTTTGGCTTTGTATAGAGCAGCAATTATTTCATTTCATGTGTTGAAGCTAACATTCTGGCAATTCTTTGTTCAAGACATAAGGAAACGTGCCATCAAGTTCCGTGAAACTCTTATCCGCTTGGGACCTTTCTATATCAAGGCAATACAGCTTGGTCAGGCTTTGAGCACTAGGCCAGATATACTACCAACTGAATACTGCCAAGAGCTTGTTAAGTTACAGGATCAAATACCCCCATTTCCAACCCCTGTAGCTATTAAATCTATTGAATCCCAGCTTGGAGTTAGTGTTTCAGACATTTTTGCTGATATTAGCCCACAGCCTATTGCTGCGGCATCCCTAGGGCAGGTCTATAAAGCTCACCTGCACTCTGGGGAGCTGGTAGCTGTTAAAGTACAAAGGCCTGGCATGTCACTTTCATTGACCCTTGATGCCTTGTTATTCCATATGATTGGGGGCCAATTAAAGCGATTTGCCAAGGCCCGCAAAGATCTATTAGTGGCAGTGAATGAGATGGTGAGGCACATGTTTGATGAAATTGATTACATTCTAGAGGCAAAAAATGCTGAACGTTTTGCTTCTCTCTATGCTTCACATCCACGTGACGAGAAAAAAGATTATCCAAATGCTACAGCTGGGAAAACTTGTAGAAATAAAGAGGCAAACTGTATAAAAGTGCCAAAAATATATTGGGACCTTACCCGTAGGGCAGTGCTGACAATGGAGTGGATTGATGGAATAAAGCTTACAGATGAAATTGGCCTAAAGACGGCCTTTCTGAACAGAAAAGAACTCATTGACCAGGGATTATACTGTTCTTTGAGACAACTGCTTGAGGTGGGATTCTTCCATGCTGACCCACATCCTGGTAATCTTGTTGCCACTGATAGTGGTGCTCTTGCATATTTTGATTTTGGAATGATGGGTGATATTCCGCGACATTATCGCGTGGGGCTTATTCAAATGCTTGTGCACTTTGTTAATCGTGACTCTCTGGGTTTGGCAAATGACTTTCTTTCATTGGGATTTATTCCTGAAGGGGTTGATATACAACCAGTTGCAGATGCAATGAAAGCATCCTTTAGTGACAGGAACAGACAATCTCAAGATTTTCAGGGAATAATGGACCAACTATACAATATTATGTATGAATTCAACTTCTCTCTTCCTCCGGACTATGCCCTGGTGATAAGGGCTCTGGGATCACTAGAAGGCACAGCCAAAGTTCTGGATCCTGATTTCAAAGTTGTTGAGAGTGCATATCCTTTTGTGGTTGGAAGACTTTTGGCTGACCCAAATCCTGATATGAGAAGAATTTTAAGAGAACTTCTCATACGCAGTGATGGATCCATACGGTGGAATAGGCTAGAACGCCTGGTTGCAGCAATATCTGAACAGGCTTCTGAGTCTGTTAGAGAGTCCCCTAATTCGGAGGAGATTAGTACTCCTAATCCTTTGAGAAGGAAATCATTTGACATGCATGCTGTTGTTGCTGCCACTGAAGATCTTTTACACTTCATTCTCTCTGCGAAGGGTCAAAGGGTACGTGTATTCCTTGTTCAGGATATAATTGGTGCAGCTGATGCTTTTTTTCAGGATGAAGTTGTTGGTAACATGTTCAATGACAATCCTGAAGCCAGAGACACACTTGACTCGGAGGGACATACCATGCTCGTGAGGGTGGTAAATGGGTTTCACTATTTCAGTCAAGCTGTAAAGTTGGCCCCAGAGGTGTGGACAGCAATGCTTATACGCGTGGCGTTTACACCAGAGGTTCATAGGTTTACGTTAGATATCTTTTCGTCGCTACTCATTCATTTTTGTGGCAAAATCCCAGAAACTACTTTCATTACTCTATCGAGACTTATGCACAAGTTGGGCTTCTCACTTATGTATGAAAGGGAAAAGGTCACCGTGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ABC1

Protein Analysis

763

Amino Acids

86.52

Weight (kDa)

6.61

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 195 - 458 1.3e-70 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 741
Acc36I ACCTGC 2 cut(s) 706, 741
AccB7I CCANNNNNTGG 2 cut(s) 1235, 1725
AccII CGCG 3 cut(s) 1306, 1317, 2124
AccIII TCCGGA 1 cut(s) 1540
AciI CCGC 5 cut(s) 266, 487, 701, 853, 1304
AclI AACGTT 1 cut(s) 940
AclWI GGATC 6 cut(s) 600, 1579, 1595, 1608, 1710, 1723
AcsI RAATTY 4 cut(s) 108, 305, 1520, 1683
AcuI CTGAAG 3 cut(s) 1425, 1890, 2022
AcvI CACGTG 1 cut(s) 971
AfaI GTAC 3 cut(s) 765, 1813, 1914
AfiI CCNNNNNNNGG 7 cut(s) 145, 715, 1138, 1235, 1725, 1798, 1930
AflIII ACRYGT 4 cut(s) 894, 1915, 1983, 2122
AgsI TTSAA 8 cut(s) 167, 415, 443, 638, 1331, 1525, 1612, 1990
AjnI CCWGG 5 cut(s) 772, 1170, 1234, 1551, 1743
AjuI GAANNNNNNNTTGG 4 cut(s) 291, 323, 630, 662
AleI CACNNNNGTG 1 cut(s) 242
Alw21I GWGCWC 4 cut(s) 249, 539, 1267, 1344
Alw26I GTCTC 5 cut(s) 113, 198, 1186, 2004, 2224
Alw44I GTGCAC 2 cut(s) 245, 1340
AlwI GGATC 6 cut(s) 600, 1579, 1595, 1608, 1710, 1723
Aor13HI TCCGGA 1 cut(s) 1540
AoxI GGCC 7 cut(s) 542, 770, 826, 849, 1129, 1140, 2091
ApaLI GTGCAC 2 cut(s) 245, 1340
ApeKI GCWGC 6 cut(s) 350, 389, 698, 1751, 1862, 1946
ApoI RAATTY 4 cut(s) 108, 305, 1520, 1683
Asp700I GAANNNNTTC 1 cut(s) 343
AspA2I CCTAGG 1 cut(s) 709
AspS9I GGNCC 7 cut(s) 365, 494, 826, 850, 1063, 1495, 2092
AsuHPI GGTGA 7 cut(s) 229, 263, 722, 898, 1307, 1567, 2272
AvaII GGWCC 4 cut(s) 365, 494, 1063, 1495
AvrII CCTAGG 1 cut(s) 709
BaeGI GKGCMC 2 cut(s) 249, 1344
BamHI GGATCC 2 cut(s) 1600, 1715
BanII GRGCYC 1 cut(s) 1567
BarI GAAGNNNNNNTAC 2 cut(s) 1863, 1895
BauI CACGAG 1 cut(s) 2042
BbrPI CACGTG 1 cut(s) 971
BbsI GAAGAC 1 cut(s) 1654
Bbv12I GWGCWC 4 cut(s) 249, 539, 1267, 1344
BbvI GCAGC 6 cut(s) 337, 401, 685, 1763, 1849, 1958
BccI CCATC 6 cut(s) 168, 470, 877, 1097, 1285, 1706
BceAI ACGGC 1 cut(s) 1155
BcgI CGANNNNNNTGC 2 cut(s) 2218, 2252
BciT130I CCWGG 5 cut(s) 774, 1172, 1236, 1553, 1745
BcoDI GTCTC 5 cut(s) 113, 198, 1186, 2004, 2224
BfaI CTAG 6 cut(s) 296, 540, 710, 920, 1577, 1736
BfmI CTRYAG 2 cut(s) 618, 999
BfuAI ACCTGC 2 cut(s) 706, 741
BglII AGATCT 2 cut(s) 859, 1873
BisI GCNGC 7 cut(s) 351, 390, 699, 702, 1752, 1863, 1947
BlnI CCTAGG 1 cut(s) 709
BlsI GCNGC 7 cut(s) 352, 391, 700, 703, 1753, 1864, 1948
BmcAI AGTACT 1 cut(s) 1813
Bme1390I CCNGG 5 cut(s) 774, 1172, 1236, 1553, 1745
Bme18I GGWCC 4 cut(s) 365, 494, 1063, 1495
BmgT120I GGNCC 7 cut(s) 365, 494, 826, 850, 1063, 1495, 2092
BmiI GGNNCC 6 cut(s) 495, 827, 1064, 1602, 1717, 2094
BmrFI CCNGG 5 cut(s) 774, 1172, 1236, 1553, 1745
BmsI GCATC 6 cut(s) 140, 713, 790, 1423, 1454, 1942
BpiI GAAGAC 1 cut(s) 1654
BplI GAGNNNNNCTC 2 cut(s) 1683, 1715
BpmI CTGGAG 1 cut(s) 319
BpuEI CTTGAG 2 cut(s) 1223, 1458
BsaAI YACGTR 2 cut(s) 971, 1916
BsaI GGTCTC 2 cut(s) 113, 198
BsaJI CCNNGG 5 cut(s) 228, 709, 846, 1171, 1551
BsaWI WCCGGW 1 cut(s) 1540
BsaXI ACNNNNNCTCC 2 cut(s) 642, 672
Bsc4I CCNNNNNNNGG 7 cut(s) 145, 715, 1138, 1235, 1725, 1798, 1930
Bse1I ACTGG 2 cut(s) 209, 1424
Bse3DI GCAATG 2 cut(s) 1443, 2118
BseAI TCCGGA 1 cut(s) 1540
BseBI CCWGG 5 cut(s) 774, 1172, 1236, 1553, 1745
BseDI CCNNGG 5 cut(s) 228, 709, 846, 1171, 1551
BseGI GGATG 9 cut(s) 13, 73, 155, 179, 704, 964, 1231, 1445, 1972
BseLI CCNNNNNNNGG 7 cut(s) 145, 715, 1138, 1235, 1725, 1798, 1930
BseMI GCAATG 2 cut(s) 1443, 2118
BseMII CTCAG 1 cut(s) 1764
BseNI ACTGG 2 cut(s) 209, 1424
BseRI GAGGAG 1 cut(s) 1817
BseSI GKGCMC 2 cut(s) 249, 1344
BseXI GCAGC 6 cut(s) 337, 401, 685, 1763, 1849, 1958
BseYI CCCAGC 2 cut(s) 642, 1004
BsgI GTGCAG 2 cut(s) 719, 1965
Bsh1236I CGCG 3 cut(s) 1306, 1317, 2124
BshFI GGCC 7 cut(s) 544, 772, 828, 851, 1131, 1142, 2093
BsiHKAI GWGCWC 4 cut(s) 249, 539, 1267, 1344
BsiSI CCGG 1 cut(s) 1541
BslFI GGGAC 4 cut(s) 507, 1076, 1774, 2043
BslI CCNNNNNNNGG 7 cut(s) 145, 715, 1138, 1235, 1725, 1798, 1930
BsmAI GTCTC 5 cut(s) 113, 198, 1186, 2004, 2224
BsmFI GGGAC 4 cut(s) 507, 1076, 1774, 2043
BsnI GGCC 7 cut(s) 544, 772, 828, 851, 1131, 1142, 2093
Bso31I GGTCTC 2 cut(s) 113, 198
Bsp1286I GDGCHC 5 cut(s) 249, 539, 1267, 1344, 1567
Bsp13I TCCGGA 1 cut(s) 1540
Bsp143I GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
BspACI CCGC 5 cut(s) 266, 487, 701, 853, 1304
BspANI GGCC 7 cut(s) 544, 772, 828, 851, 1131, 1142, 2093
BspCNI CTCAG 1 cut(s) 1765
BspEI TCCGGA 1 cut(s) 1540
BspFNI CGCG 3 cut(s) 1306, 1317, 2124
BspLI GGNNCC 6 cut(s) 495, 827, 1064, 1602, 1717, 2094
BspMI ACCTGC 2 cut(s) 706, 741
BspPI GGATC 6 cut(s) 600, 1579, 1595, 1608, 1710, 1723
BspTNI GGTCTC 2 cut(s) 113, 198
BsrDI GCAATG 2 cut(s) 1443, 2118
BsrI ACTGG 2 cut(s) 209, 1424
BssECI CCNNGG 5 cut(s) 228, 709, 846, 1171, 1551
BssMI GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
BssSI CACGAG 1 cut(s) 2042
BssT1I CCWWGG 2 cut(s) 709, 846
Bst2BI CACGAG 1 cut(s) 2042
Bst2UI CCWGG 5 cut(s) 774, 1172, 1236, 1553, 1745
Bst4CI ACNGT 7 cut(s) 124, 251, 359, 1037, 1184, 1725, 2284
Bst6I CTCTTC 1 cut(s) 1539
BstAPI GCANNNNNTGC 2 cut(s) 932, 1952
BstBAI YACGTR 2 cut(s) 971, 1916
BstC8I GCNNGC 3 cut(s) 245, 853, 1851
BstDEI CTNAG 1 cut(s) 1773
BstDSI CCRYGG 1 cut(s) 228
BstEII GGTNACC 1 cut(s) 2278
BstENI CCTNNNNNAGG 2 cut(s) 713, 1928
BstF5I GGATG 9 cut(s) 13, 73, 155, 179, 704, 964, 1231, 1445, 1972
BstFNI CGCG 3 cut(s) 1306, 1317, 2124
BstKTI GATC 6 cut(s) 595, 862, 1574, 1603, 1718, 1876
BstMAI GTCTC 5 cut(s) 113, 198, 1186, 2004, 2224
BstMBI GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
BstMWI GCNNNNNNNGC 6 cut(s) 272, 323, 932, 1442, 1859, 1952
BstNI CCWGG 5 cut(s) 774, 1172, 1236, 1553, 1745
BstNSI RCATGY 6 cut(s) 317, 781, 898, 1849, 1853, 1987
BstPI GGTNACC 1 cut(s) 2278
BstSCI CCNGG 5 cut(s) 772, 1170, 1234, 1551, 1743
BstSFI CTRYAG 2 cut(s) 618, 999
BstSLI GKGCMC 2 cut(s) 249, 1344
BstUI CGCG 3 cut(s) 1306, 1317, 2124
BstV1I GCAGC 6 cut(s) 337, 401, 685, 1763, 1849, 1958
BstV2I GAAGAC 1 cut(s) 1654
BstX2I RGATCY 4 cut(s) 859, 1600, 1715, 1873
BstXI CCANNNNNNTGG 4 cut(s) 204, 821, 1597, 2103
BstYI RGATCY 4 cut(s) 859, 1600, 1715, 1873
BsuRI GGCC 7 cut(s) 544, 772, 828, 851, 1131, 1142, 2093
BtgI CCRYGG 1 cut(s) 228
BtsCI GGATG 9 cut(s) 13, 73, 155, 179, 704, 964, 1231, 1445, 1972
BtsI GCAGTG 3 cut(s) 879, 1086, 1714
BtsIMutI CAGTG 5 cut(s) 879, 1086, 1251, 1714, 1866
BveI ACCTGC 2 cut(s) 706, 741
Cac8I GCNNGC 3 cut(s) 245, 853, 1851
Cfr13I GGNCC 7 cut(s) 365, 494, 826, 850, 1063, 1495, 2092
Csp6I GTAC 3 cut(s) 764, 1812, 1913
CviQI GTAC 3 cut(s) 764, 1812, 1913
DdeI CTNAG 1 cut(s) 1773
DpnI GATC 6 cut(s) 594, 861, 1573, 1602, 1717, 1875
DpnII GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
Eam1104I CTCTTC 1 cut(s) 1539
EarI CTCTTC 1 cut(s) 1539
Eco130I CCWWGG 2 cut(s) 709, 846
Eco147I AGGCCT 1 cut(s) 772
Eco24I GRGCYC 1 cut(s) 1567
Eco31I GGTCTC 2 cut(s) 113, 198
Eco32I GATATC 1 cut(s) 2164
Eco47I GGWCC 4 cut(s) 365, 494, 1063, 1495
Eco57I CTGAAG 3 cut(s) 1425, 1890, 2022
Eco72I CACGTG 1 cut(s) 971
Eco91I GGTNACC 1 cut(s) 2278
EcoNI CCTNNNNNAGG 2 cut(s) 713, 1928
EcoO109I RGGNCCY 2 cut(s) 494, 1063
EcoO65I GGTNACC 1 cut(s) 2278
EcoRI GAATTC 1 cut(s) 1520
EcoRII CCWGG 5 cut(s) 772, 1170, 1234, 1551, 1743
EcoRV GATATC 1 cut(s) 2164
EcoT14I CCWWGG 2 cut(s) 709, 846
EcoT22I ATGCAT 1 cut(s) 1851
EcoT38I GRGCYC 1 cut(s) 1567
ErhI CCWWGG 2 cut(s) 709, 846
FalI AAGNNNNNCTT 4 cut(s) 1127, 1159, 2234, 2266
FaqI GGGAC 4 cut(s) 507, 1076, 1774, 2043
FauI CCCGC 1 cut(s) 860
FauNDI CATATG 1 cut(s) 816
Fnu4HI GCNGC 7 cut(s) 351, 390, 699, 702, 1752, 1863, 1947
FokI GGATG 9 cut(s) 20, 60, 162, 186, 691, 951, 1218, 1432, 1979
FriOI GRGCYC 1 cut(s) 1567
Fsp4HI GCNGC 7 cut(s) 351, 390, 699, 702, 1752, 1863, 1947
FspBI CTAG 6 cut(s) 296, 540, 710, 920, 1577, 1736
GluI GCNGC 7 cut(s) 351, 390, 699, 702, 1752, 1863, 1947
GsaI CCCAGC 2 cut(s) 646, 1008
GsuI CTGGAG 1 cut(s) 319
HaeIII GGCC 7 cut(s) 544, 772, 828, 851, 1131, 1142, 2093
HapII CCGG 1 cut(s) 1541
HindIII AAGCTT 1 cut(s) 1112
HinfI GANTC 8 cut(s) 256, 290, 638, 1212, 1358, 1775, 1787, 2021
HpaII CCGG 1 cut(s) 1541
HphI GGTGA 7 cut(s) 229, 263, 722, 898, 1307, 1567, 2272
Hpy166II GTNNAC 5 cut(s) 247, 1342, 2106, 2133, 2154
Hpy188I TCNGA 7 cut(s) 173, 664, 1149, 1762, 1774, 1801, 2026
Hpy8I GTNNAC 5 cut(s) 247, 1342, 2106, 2133, 2154
Hpy99I CGWCG 1 cut(s) 2176
HpyAV CCTTC 5 cut(s) 280, 1400, 1574, 1824, 1894
HpyCH4III ACNGT 7 cut(s) 124, 251, 359, 1037, 1184, 1725, 2284
HpyCH4IV ACGT 5 cut(s) 457, 940, 970, 1915, 2156
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 323, 932, 1442, 1859, 1952
HpyF3I CTNAG 1 cut(s) 1773
HpySE526I ACGT 5 cut(s) 457, 940, 970, 1915, 2156
Kpn2I TCCGGA 1 cut(s) 1540
Kzo9I GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
LmnI GCTCC 3 cut(s) 323, 338, 745
Lsp1109I GCAGC 6 cut(s) 337, 401, 685, 1763, 1849, 1958
LweI GCATC 6 cut(s) 140, 713, 790, 1423, 1454, 1942
MaeI CTAG 6 cut(s) 296, 540, 710, 920, 1577, 1736
MaeII ACGT 5 cut(s) 457, 940, 970, 1915, 2156
MaeIII GTNAC 8 cut(s) 291, 585, 780, 971, 1355, 1454, 1979, 2278
MalI GATC 6 cut(s) 594, 861, 1573, 1602, 1717, 1875
MboI GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
MboII GAAGA 5 cut(s) 1207, 1526, 1659, 1692, 1883
MfeI CAATTG 1 cut(s) 23
MflI RGATCY 4 cut(s) 859, 1600, 1715, 1873
MhlI GDGCHC 5 cut(s) 249, 539, 1267, 1344, 1567
MluI ACGCGT 1 cut(s) 2122
MlyI GAGTC 6 cut(s) 265, 299, 1352, 1784, 1796, 2015
MmeI TCCRAC 2 cut(s) 635, 1624
Mph1103I ATGCAT 1 cut(s) 1851
MroI TCCGGA 1 cut(s) 1540
MroXI GAANNNNTTC 1 cut(s) 343
MseI TTAA 9 cut(s) 30, 51, 582, 627, 759, 833, 1350, 1688, 2290
MslI CAYNNNNRTG 4 cut(s) 242, 969, 2042, 2190
MspA1I CMGCKG 2 cut(s) 1004, 1949
MspI CCGG 1 cut(s) 1541
MspR9I CCNGG 5 cut(s) 774, 1172, 1236, 1553, 1745
MunI CAATTG 1 cut(s) 23
MvaI CCWGG 5 cut(s) 774, 1172, 1236, 1553, 1745
MvnI CGCG 3 cut(s) 1306, 1317, 2124
MwoI GCNNNNNNNGC 6 cut(s) 272, 323, 932, 1442, 1859, 1952
NdeI CATATG 1 cut(s) 816
NdeII GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
NlaIV GGNNCC 6 cut(s) 495, 827, 1064, 1602, 1717, 2094
NmuCI GTSAC 6 cut(s) 291, 780, 971, 1355, 1454, 2278
NsiI ATGCAT 1 cut(s) 1851
NspI RCATGY 6 cut(s) 317, 781, 898, 1849, 1853, 1987
OliI CACNNNNGTG 1 cut(s) 242
PaeI GCATGC 1 cut(s) 1853
PaqCI CACCTGC 1 cut(s) 741
PceI AGGCCT 1 cut(s) 772
PciI ACATGT 2 cut(s) 894, 1983
PdmI GAANNNNTTC 1 cut(s) 343
PfeI GAWTC 2 cut(s) 638, 1212
PflMI CCANNNNNTGG 2 cut(s) 1235, 1725
PkrI GCNGC 7 cut(s) 352, 391, 700, 703, 1753, 1864, 1948
PleI GAGTC 6 cut(s) 264, 298, 1352, 1783, 1795, 2015
PmaCI CACGTG 1 cut(s) 971
PmlI CACGTG 1 cut(s) 971
PpsI GAGTC 6 cut(s) 264, 298, 1352, 1783, 1795, 2015
Ppu21I YACGTR 2 cut(s) 971, 1916
PpuMI RGGWCCY 2 cut(s) 494, 1063
PscI ACATGT 2 cut(s) 894, 1983
Psp1406I AACGTT 1 cut(s) 940
Psp5II RGGWCCY 2 cut(s) 494, 1063
Psp6I CCWGG 5 cut(s) 772, 1170, 1234, 1551, 1743
PspCI CACGTG 1 cut(s) 971
PspEI GGTNACC 1 cut(s) 2278
PspFI CCCAGC 2 cut(s) 642, 1004
PspGI CCWGG 5 cut(s) 772, 1170, 1234, 1551, 1743
PspN4I GGNNCC 6 cut(s) 495, 827, 1064, 1602, 1717, 2094
PspPI GGNCC 7 cut(s) 365, 494, 826, 850, 1063, 1495, 2092
PspPPI RGGWCCY 2 cut(s) 494, 1063
PsrI GAACNNNNNNTAC 4 cut(s) 1686, 1718, 1911, 1943
PsuI RGATCY 4 cut(s) 859, 1600, 1715, 1873
PvuII CAGCTG 2 cut(s) 1004, 1949
RsaI GTAC 3 cut(s) 765, 1813, 1914
RsaNI GTAC 3 cut(s) 764, 1812, 1913
RseI CAYNNNNRTG 4 cut(s) 242, 969, 2042, 2190
SaqAI TTAA 9 cut(s) 30, 51, 582, 627, 759, 833, 1350, 1688, 2290
SatI GCNGC 7 cut(s) 351, 390, 699, 702, 1752, 1863, 1947
Sau3AI GATC 6 cut(s) 592, 859, 1571, 1600, 1715, 1873
Sau96I GGNCC 7 cut(s) 365, 494, 826, 850, 1063, 1495, 2092
ScaI AGTACT 1 cut(s) 1813
SchI GAGTC 6 cut(s) 265, 299, 1352, 1784, 1796, 2015
ScrFI CCNGG 5 cut(s) 774, 1172, 1236, 1553, 1745
SduI GDGCHC 5 cut(s) 249, 539, 1267, 1344, 1567
SfaNI GCATC 6 cut(s) 140, 713, 790, 1423, 1454, 1942
SfcI CTRYAG 2 cut(s) 618, 999
SinI GGWCC 4 cut(s) 365, 494, 1063, 1495
SmiMI CAYNNNNRTG 4 cut(s) 242, 969, 2042, 2190
SmlI CTYRAG 2 cut(s) 1202, 1473
SmoI CTYRAG 2 cut(s) 1202, 1473
SphI GCATGC 1 cut(s) 1853
SseBI AGGCCT 1 cut(s) 772
SsiI CCGC 5 cut(s) 266, 487, 701, 853, 1304
SspI AATATT 1 cut(s) 1510
SspMI CTAG 6 cut(s) 296, 540, 710, 920, 1577, 1736
StuI AGGCCT 1 cut(s) 772
StyD4I CCNGG 5 cut(s) 772, 1170, 1234, 1551, 1743
StyI CCWWGG 2 cut(s) 709, 846
TaaI ACNGT 7 cut(s) 124, 251, 359, 1037, 1184, 1725, 2284
TaiI ACGT 5 cut(s) 460, 943, 973, 1918, 2159
TaqI TCGA 1 cut(s) 2228
TatI WGTACW 2 cut(s) 763, 1811
TauI GCSGC 1 cut(s) 704
TfiI GAWTC 2 cut(s) 638, 1212
Tru1I TTAA 9 cut(s) 30, 51, 582, 627, 759, 833, 1350, 1688, 2290
Tru9I TTAA 9 cut(s) 30, 51, 582, 627, 759, 833, 1350, 1688, 2290
TscAI CASTG 5 cut(s) 879, 1086, 1258, 1714, 1873
TseFI GTSAC 6 cut(s) 291, 780, 971, 1355, 1454, 2278
TseI GCWGC 6 cut(s) 350, 389, 698, 1751, 1862, 1946
Tsp45I GTSAC 6 cut(s) 291, 780, 971, 1355, 1454, 2278
TspGWI ACGGA 2 cut(s) 249, 461
TspRI CASTG 5 cut(s) 879, 1086, 1258, 1714, 1873
Van91I CCANNNNNTGG 2 cut(s) 1235, 1725
VneI GTGCAC 2 cut(s) 245, 1340
VpaK11BI GGWCC 4 cut(s) 365, 494, 1063, 1495
XagI CCTNNNNNAGG 2 cut(s) 713, 1928
XapI RAATTY 4 cut(s) 108, 305, 1520, 1683
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 6 cut(s) 317, 781, 898, 1849, 1853, 1987
XcmI CCANNNNNNNNNTGG 1 cut(s) 1056
XmaJI CCTAGG 1 cut(s) 709
XmnI GAANNNNTTC 1 cut(s) 343
XspI CTAG 6 cut(s) 296, 540, 710, 920, 1577, 1736
ZrmI AGTACT 1 cut(s) 1813
Zsp2I ATGCAT 1 cut(s) 1851
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.