Auxilin-like protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g39550 FvH4_2g39550 FvH4_2g39550 |
| malus_domestica | MD08G1028800.v1.1 MD15G1024300.v1.1 |
| prunus_persica | Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1 |
| pyrus_communis | pycom15g02090 |
| rosa_chinensis | RchiOBHm_Chr6g0301361 |
| rosa_laevigata | RLG00000011257 |
| rosa_multiflora | Rmu_sc0013354.1_g000026 |
| rosa_roxburghii | Rroxscaffold_7G00166880 |
| rosa_rugosa | Rorug06G0304100 Rorug06G0304200 |
| rosa_samantha | Rh6AG417600 Rh6BG424300 Rh6CG431400 Rh6DG417300 |
| rosa_wichuraiana | Rw6G036140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 497, 2683, 2848 |
| Acc16I | TGCGCA | 1 cut(s) | 1038 |
| Acc36I | ACCTGC | 5 cut(s) | 497, 542, 2683, 2848, 3247 |
| AccB1I | GGYRCC | 1 cut(s) | 155 |
| AccBSI | CCGCTC | 2 cut(s) | 554, 4726 |
| AccI | GTMKAC | 3 cut(s) | 1270, 3237, 3848 |
| AccII | CGCG | 3 cut(s) | 564, 1081, 4820 |
| AccIII | TCCGGA | 1 cut(s) | 187 |
| AclWI | GGATC | 7 cut(s) | 2715, 2800, 2880, 3535, 4503, 4677, 4703 |
| AcoI | YGGCCR | 1 cut(s) | 49 |
| AcuI | CTGAAG | 8 cut(s) | 849, 2550, 3189, 3330, 3474, 3536, 3633, 3702 |
| AcyI | GRCGYC | 1 cut(s) | 156 |
| AfaI | GTAC | 7 cut(s) | 8, 1536, 1695, 2823, 3898, 4848, 5108 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 3354, 3550, 4377, 4979 |
| AflIII | ACRYGT | 7 cut(s) | 1079, 2227, 2240, 2305, 2588, 2803, 2968 |
| AgeI | ACCGGT | 2 cut(s) | 642, 4632 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2524 |
| AjnI | CCWGG | 2 cut(s) | 2718, 2883 |
| Alw21I | GWGCWC | 5 cut(s) | 230, 300, 2675, 2840, 3081 |
| AlwI | GGATC | 7 cut(s) | 2715, 2800, 2880, 3535, 4503, 4677, 4703 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1423 |
| Ama87I | CYCGRG | 3 cut(s) | 1683, 3404, 4491 |
| Aor13HI | TCCGGA | 1 cut(s) | 187 |
| AoxI | GGCC | 6 cut(s) | 49, 259, 1622, 3935, 4368, 4970 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2258, 2290, 3176, 3208 |
| AseI | ATTAAT | 1 cut(s) | 3660 |
| AsiGI | ACCGGT | 2 cut(s) | 642, 4632 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 208, 1605, 1955, 2081, 5153 |
| AspLEI | GCGC | 6 cut(s) | 158, 564, 566, 1039, 4610, 4676 |
| AsuC2I | CCSGG | 1 cut(s) | 118 |
| AsuII | TTCGAA | 1 cut(s) | 2010 |
| AsuNHI | GCTAGC | 1 cut(s) | 1391 |
| AvaI | CYCGRG | 3 cut(s) | 1683, 3404, 4491 |
| AvaII | GGWCC | 8 cut(s) | 645, 919, 1310, 2773, 2938, 3344, 3677, 4635 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3756, 3789 |
| BanI | GGYRCC | 1 cut(s) | 155 |
| BanII | GRGCYC | 2 cut(s) | 230, 300 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 224, 256 |
| BauI | CACGAG | 1 cut(s) | 4302 |
| BbsI | GAAGAC | 8 cut(s) | 132, 244, 1418, 1589, 1656, 2424, 3720, 4394 |
| Bbv12I | GWGCWC | 5 cut(s) | 230, 300, 2675, 2840, 3081 |
| BbvCI | CCTCAGC | 1 cut(s) | 4365 |
| BceAI | ACGGC | 2 cut(s) | 82, 271 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1028, 1062 |
| BciT130I | CCWGG | 2 cut(s) | 2720, 2885 |
| BciVI | GTATCC | 1 cut(s) | 3757 |
| BcnI | CCSGG | 1 cut(s) | 118 |
| BfaI | CTAG | 8 cut(s) | 1392, 2799, 2964, 3354, 4185, 4614, 4646, 4770 |
| BfmI | CTRYAG | 8 cut(s) | 1638, 1965, 2049, 2208, 2855, 3241, 4017, 4560 |
| BfoI | RGCGCY | 2 cut(s) | 159, 4611 |
| BfuAI | ACCTGC | 5 cut(s) | 497, 542, 2683, 2848, 3247 |
| BfuI | GTATCC | 1 cut(s) | 3757 |
| BglII | AGATCT | 1 cut(s) | 4583 |
| BlpI | GCTNAGC | 4 cut(s) | 306, 1461, 4422, 4722 |
| Bme1390I | CCNGG | 3 cut(s) | 118, 2720, 2885 |
| Bme18I | GGWCC | 8 cut(s) | 645, 919, 1310, 2773, 2938, 3344, 3677, 4635 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2524 |
| BmeT110I | CYCGRG | 3 cut(s) | 1683, 3404, 4491 |
| BmrFI | CCNGG | 3 cut(s) | 118, 2720, 2885 |
| BmsI | GCATC | 9 cut(s) | 670, 925, 1232, 1505, 2144, 3580, 4685, 4882, 5131 |
| BmtI | GCTAGC | 1 cut(s) | 1395 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2430 |
| BpiI | GAAGAC | 8 cut(s) | 132, 244, 1418, 1589, 1656, 2424, 3720, 4394 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1193, 1225 |
| BpmI | CTGGAG | 6 cut(s) | 720, 975, 1464, 1545, 2906, 4229 |
| Bpu10I | CCTNAGC | 4 cut(s) | 151, 2328, 3777, 4365 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 306, 1461, 4422, 4722 |
| Bpu14I | TTCGAA | 1 cut(s) | 2010 |
| BpuEI | CTTGAG | 5 cut(s) | 1245, 2127, 2685, 2850, 3952 |
| BpuMI | CCSGG | 1 cut(s) | 118 |
| Bsa29I | ATCGAT | 1 cut(s) | 1008 |
| BsaAI | YACGTR | 2 cut(s) | 1538, 2589 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2134, 2979, 3417 |
| BsaHI | GRCGYC | 1 cut(s) | 156 |
| BsaI | GGTCTC | 2 cut(s) | 542, 657 |
| BsaJI | CCNNGG | 4 cut(s) | 262, 4372, 4896, 4966 |
| BsaWI | WCCGGW | 4 cut(s) | 172, 187, 642, 4632 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 67, 97, 696, 726, 1518, 1548 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 3354, 3550, 4377, 4979 |
| Bse118I | RCCGGY | 4 cut(s) | 642, 683, 4632, 4990 |
| Bse1I | ACTGG | 5 cut(s) | 842, 1481, 1528, 3096, 3825 |
| Bse3DI | GCAATG | 1 cut(s) | 4940 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2134, 2979, 3417 |
| BseAI | TCCGGA | 1 cut(s) | 187 |
| BseBI | CCWGG | 2 cut(s) | 2720, 2885 |
| BseCI | ATCGAT | 1 cut(s) | 1008 |
| BseDI | CCNNGG | 4 cut(s) | 262, 4372, 4896, 4966 |
| BseGI | GGATG | 7 cut(s) | 1444, 2671, 2836, 3031, 3418, 5062, 5146 |
| BseJI | GATNNNNATC | 3 cut(s) | 2134, 2979, 3417 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 3354, 3550, 4377, 4979 |
| BseMI | GCAATG | 1 cut(s) | 4940 |
| BseNI | ACTGG | 5 cut(s) | 842, 1481, 1528, 3096, 3825 |
| BsePI | GCGCGC | 1 cut(s) | 562 |
| BseYI | CCCAGC | 5 cut(s) | 1587, 1619, 2642, 3594, 4717 |
| BsgI | GTGCAG | 3 cut(s) | 2711, 4418, 5034 |
| Bsh1236I | CGCG | 3 cut(s) | 564, 1081, 4820 |
| BshFI | GGCC | 6 cut(s) | 51, 261, 1624, 3937, 4370, 4972 |
| BshNI | GGYRCC | 1 cut(s) | 155 |
| BshTI | ACCGGT | 2 cut(s) | 642, 4632 |
| BshVI | ATCGAT | 1 cut(s) | 1008 |
| BsiHKAI | GWGCWC | 5 cut(s) | 230, 300, 2675, 2840, 3081 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1683, 3404, 4491 |
| BsiSI | CCGG | 8 cut(s) | 48, 118, 173, 188, 643, 684, 4633, 4991 |
| BslFI | GGGAC | 5 cut(s) | 932, 2786, 3330, 3577, 3690 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 3354, 3550, 4377, 4979 |
| BsmBI | CGTCTC | 3 cut(s) | 1400, 2381, 3824 |
| BsmFI | GGGAC | 5 cut(s) | 932, 2786, 3330, 3577, 3690 |
| BsmI | GAATGC | 4 cut(s) | 514, 2655, 2729, 5094 |
| BsnI | GGCC | 6 cut(s) | 51, 261, 1624, 3937, 4370, 4972 |
| Bso31I | GGTCTC | 2 cut(s) | 542, 657 |
| BsoBI | CYCGRG | 3 cut(s) | 1683, 3404, 4491 |
| Bsp119I | TTCGAA | 1 cut(s) | 2010 |
| Bsp1286I | GDGCHC | 5 cut(s) | 230, 300, 2675, 2840, 3081 |
| Bsp13I | TCCGGA | 1 cut(s) | 187 |
| Bsp1407I | TGTACA | 1 cut(s) | 4846 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 306, 1461, 4422, 4722 |
| BspANI | GGCC | 6 cut(s) | 51, 261, 1624, 3937, 4370, 4972 |
| BspDI | ATCGAT | 1 cut(s) | 1008 |
| BspEI | TCCGGA | 1 cut(s) | 187 |
| BspFNI | CGCG | 3 cut(s) | 564, 1081, 4820 |
| BspHI | TCATGA | 1 cut(s) | 3882 |
| BspMAI | CTGCAG | 3 cut(s) | 2212, 2859, 4021 |
| BspMI | ACCTGC | 5 cut(s) | 497, 542, 2683, 2848, 3247 |
| BspOI | GCTAGC | 1 cut(s) | 1395 |
| BspPI | GGATC | 7 cut(s) | 2715, 2800, 2880, 3535, 4503, 4677, 4703 |
| BspQI | GCTCTTC | 1 cut(s) | 5160 |
| BspT104I | TTCGAA | 1 cut(s) | 2010 |
| BspT107I | GGYRCC | 1 cut(s) | 155 |
| BspTNI | GGTCTC | 2 cut(s) | 542, 657 |
| BsrBI | CCGCTC | 2 cut(s) | 554, 4726 |
| BsrDI | GCAATG | 1 cut(s) | 4940 |
| BsrFI | RCCGGY | 4 cut(s) | 642, 683, 4632, 4990 |
| BsrGI | TGTACA | 1 cut(s) | 4846 |
| BsrI | ACTGG | 5 cut(s) | 842, 1481, 1528, 3096, 3825 |
| BssAI | RCCGGY | 4 cut(s) | 642, 683, 4632, 4990 |
| BssECI | CCNNGG | 4 cut(s) | 262, 4372, 4896, 4966 |
| BssHII | GCGCGC | 1 cut(s) | 562 |
| BssNAI | GTATAC | 2 cut(s) | 1271, 3849 |
| BssNI | GRCGYC | 1 cut(s) | 156 |
| BssSI | CACGAG | 1 cut(s) | 4302 |
| BssT1I | CCWWGG | 3 cut(s) | 262, 4372, 4966 |
| Bst1107I | GTATAC | 2 cut(s) | 1271, 3849 |
| Bst2BI | CACGAG | 1 cut(s) | 4302 |
| Bst2UI | CCWGG | 2 cut(s) | 2720, 2885 |
| BstACI | GRCGYC | 1 cut(s) | 156 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1229, 4520, 4802 |
| BstAUI | TGTACA | 1 cut(s) | 4846 |
| BstBAI | YACGTR | 2 cut(s) | 1538, 2589 |
| BstBI | TTCGAA | 1 cut(s) | 2010 |
| BstF5I | GGATG | 7 cut(s) | 1444, 2671, 2836, 3031, 3418, 5062, 5146 |
| BstFNI | CGCG | 3 cut(s) | 564, 1081, 4820 |
| BstH2I | RGCGCY | 2 cut(s) | 159, 4611 |
| BstHHI | GCGC | 6 cut(s) | 158, 564, 566, 1039, 4610, 4676 |
| BstNI | CCWGG | 2 cut(s) | 2720, 2885 |
| BstNSI | RCATGY | 9 cut(s) | 469, 1063, 2231, 2244, 2309, 2374, 2807, 2972, 3641 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2430 |
| BstSCI | CCNGG | 3 cut(s) | 116, 2718, 2883 |
| BstSFI | CTRYAG | 8 cut(s) | 1638, 1965, 2049, 2208, 2855, 3241, 4017, 4560 |
| BstUI | CGCG | 3 cut(s) | 564, 1081, 4820 |
| BstV2I | GAAGAC | 8 cut(s) | 132, 244, 1418, 1589, 1656, 2424, 3720, 4394 |
| BstX2I | RGATCY | 4 cut(s) | 2792, 3540, 4583, 4682 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 674 |
| BstYI | RGATCY | 4 cut(s) | 2792, 3540, 4583, 4682 |
| BstZ17I | GTATAC | 2 cut(s) | 1271, 3849 |
| Bsu15I | ATCGAT | 1 cut(s) | 1008 |
| BsuI | GTATCC | 1 cut(s) | 3757 |
| BsuRI | GGCC | 6 cut(s) | 51, 261, 1624, 3937, 4370, 4972 |
| BsuTUI | ATCGAT | 1 cut(s) | 1008 |
| BtsCI | GGATG | 7 cut(s) | 1444, 2671, 2836, 3031, 3418, 5062, 5146 |
| BtsI | GCAGTG | 2 cut(s) | 288, 1852 |
| BtsIMutI | CAGTG | 8 cut(s) | 96, 288, 849, 1171, 1852, 2421, 2475, 3250 |
| BveI | ACCTGC | 5 cut(s) | 497, 542, 2683, 2848, 3247 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1423 |
| CciI | TCATGA | 1 cut(s) | 3882 |
| CfoI | GCGC | 6 cut(s) | 158, 564, 566, 1039, 4610, 4676 |
| Cfr10I | RCCGGY | 4 cut(s) | 642, 683, 4632, 4990 |
| ClaI | ATCGAT | 1 cut(s) | 1008 |
| CpoI | CGGWCCG | 1 cut(s) | 645 |
| CseI | GACGC | 1 cut(s) | 1661 |
| Csp6I | GTAC | 7 cut(s) | 7, 1535, 1694, 2822, 3897, 4847, 5107 |
| CspAI | ACCGGT | 2 cut(s) | 642, 4632 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3202, 3237 |
| CspI | CGGWCCG | 1 cut(s) | 645 |
| CviQI | GTAC | 7 cut(s) | 7, 1535, 1694, 2822, 3897, 4847, 5107 |
| DinI | GGCGCC | 1 cut(s) | 157 |
| DraI | TTTAAA | 1 cut(s) | 1711 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2524 |
| EaeI | YGGCCR | 1 cut(s) | 49 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2524 |
| Ecl136II | GAGCTC | 2 cut(s) | 228, 298 |
| Eco130I | CCWWGG | 3 cut(s) | 262, 4372, 4966 |
| Eco24I | GRGCYC | 2 cut(s) | 230, 300 |
| Eco31I | GGTCTC | 2 cut(s) | 542, 657 |
| Eco32I | GATATC | 1 cut(s) | 3286 |
| Eco47I | GGWCC | 8 cut(s) | 645, 919, 1310, 2773, 2938, 3344, 3677, 4635 |
| Eco53kI | GAGCTC | 2 cut(s) | 228, 298 |
| Eco57I | CTGAAG | 8 cut(s) | 849, 2550, 3189, 3330, 3474, 3536, 3633, 3702 |
| Eco88I | CYCGRG | 3 cut(s) | 1683, 3404, 4491 |
| EcoICRI | GAGCTC | 2 cut(s) | 228, 298 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2773, 3677 |
| EcoRI | GAATTC | 1 cut(s) | 275 |
| EcoRII | CCWGG | 2 cut(s) | 2718, 2883 |
| EcoRV | GATATC | 1 cut(s) | 3286 |
| EcoT14I | CCWWGG | 3 cut(s) | 262, 4372, 4966 |
| EcoT22I | ATGCAT | 1 cut(s) | 1498 |
| EcoT38I | GRGCYC | 2 cut(s) | 230, 300 |
| EgeI | GGCGCC | 1 cut(s) | 157 |
| EheI | GGCGCC | 1 cut(s) | 157 |
| ErhI | CCWWGG | 3 cut(s) | 262, 4372, 4966 |
| Esp3I | CGTCTC | 3 cut(s) | 1400, 2381, 3824 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 4573, 4605 |
| FaqI | GGGAC | 5 cut(s) | 932, 2786, 3330, 3577, 3690 |
| FauNDI | CATATG | 1 cut(s) | 2401 |
| FblI | GTMKAC | 3 cut(s) | 1270, 3237, 3848 |
| FokI | GGATG | 7 cut(s) | 1451, 2678, 2843, 3038, 3425, 5049, 5153 |
| FriOI | GRGCYC | 2 cut(s) | 230, 300 |
| FspBI | CTAG | 8 cut(s) | 1392, 2799, 2964, 3354, 4185, 4614, 4646, 4770 |
| FspI | TGCGCA | 1 cut(s) | 1038 |
| GlaI | GCGC | 6 cut(s) | 157, 563, 565, 1038, 4609, 4675 |
| GsaI | CCCAGC | 5 cut(s) | 1591, 1623, 2646, 3598, 4721 |
| GsuI | CTGGAG | 6 cut(s) | 720, 975, 1464, 1545, 2906, 4229 |
| HaeII | RGCGCY | 2 cut(s) | 159, 4611 |
| HaeIII | GGCC | 6 cut(s) | 51, 261, 1624, 3937, 4370, 4972 |
| HapII | CCGG | 8 cut(s) | 48, 118, 173, 188, 643, 684, 4633, 4991 |
| HgaI | GACGC | 1 cut(s) | 1661 |
| HhaI | GCGC | 6 cut(s) | 158, 564, 566, 1039, 4610, 4676 |
| Hin1I | GRCGYC | 1 cut(s) | 156 |
| Hin6I | GCGC | 6 cut(s) | 156, 562, 564, 1037, 4608, 4674 |
| HinP1I | GCGC | 6 cut(s) | 156, 562, 564, 1037, 4608, 4674 |
| HindIII | AAGCTT | 4 cut(s) | 207, 233, 2543, 5034 |
| HpaII | CCGG | 8 cut(s) | 48, 118, 173, 188, 643, 684, 4633, 4991 |
| Hpy99I | CGWCG | 2 cut(s) | 68, 613 |
| HpyCH4IV | ACGT | 6 cut(s) | 1537, 2588, 3627, 3711, 4459, 4801 |
| HpySE526I | ACGT | 6 cut(s) | 1537, 2588, 3627, 3711, 4459, 4801 |
| Hsp92I | GRCGYC | 1 cut(s) | 156 |
| HspAI | GCGC | 6 cut(s) | 156, 562, 564, 1037, 4608, 4674 |
| KasI | GGCGCC | 1 cut(s) | 155 |
| Kpn2I | TCCGGA | 1 cut(s) | 187 |
| KroI | GCCGGC | 1 cut(s) | 683 |
| KroNI | GCCGGC | 1 cut(s) | 685 |
| LguI | GCTCTTC | 1 cut(s) | 5160 |
| LmnI | GCTCC | 8 cut(s) | 88, 190, 225, 295, 559, 2191, 3787, 4204 |
| LweI | GCATC | 9 cut(s) | 670, 925, 1232, 1505, 2144, 3580, 4685, 4882, 5131 |
| MaeI | CTAG | 8 cut(s) | 1392, 2799, 2964, 3354, 4185, 4614, 4646, 4770 |
| MaeII | ACGT | 6 cut(s) | 1537, 2588, 3627, 3711, 4459, 4801 |
| MaeIII | GTNAC | 9 cut(s) | 366, 1474, 2591, 2695, 2860, 3182, 3947, 5011, 5073 |
| MbiI | CCGCTC | 2 cut(s) | 554, 4726 |
| MfeI | CAATTG | 1 cut(s) | 747 |
| MflI | RGATCY | 4 cut(s) | 2792, 3540, 4583, 4682 |
| MhlI | GDGCHC | 5 cut(s) | 230, 300, 2675, 2840, 3081 |
| MluI | ACGCGT | 1 cut(s) | 1079 |
| Mly113I | GGCGCC | 1 cut(s) | 156 |
| MmeI | TCCRAC | 3 cut(s) | 1745, 2074, 4755 |
| Mph1103I | ATGCAT | 1 cut(s) | 1498 |
| MroI | TCCGGA | 1 cut(s) | 187 |
| MroNI | GCCGGC | 1 cut(s) | 683 |
| MroXI | GAANNNNTTC | 5 cut(s) | 208, 1605, 1955, 2081, 5153 |
| MseI | TTAA | 9 cut(s) | 453, 762, 867, 1137, 1710, 2039, 2511, 3399, 3660 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1734 |
| MspA1I | CMGCKG | 4 cut(s) | 674, 1220, 1460, 4721 |
| MspI | CCGG | 8 cut(s) | 48, 118, 173, 188, 643, 684, 4633, 4991 |
| MspR9I | CCNGG | 3 cut(s) | 118, 2720, 2885 |
| MunI | CAATTG | 1 cut(s) | 747 |
| Mva1269I | GAATGC | 4 cut(s) | 514, 2655, 2729, 5094 |
| MvaI | CCWGG | 2 cut(s) | 2720, 2885 |
| MvnI | CGCG | 3 cut(s) | 564, 1081, 4820 |
| NaeI | GCCGGC | 1 cut(s) | 685 |
| NarI | GGCGCC | 1 cut(s) | 156 |
| NciI | CCSGG | 1 cut(s) | 118 |
| NdeI | CATATG | 1 cut(s) | 2401 |
| NgoMIV | GCCGGC | 1 cut(s) | 683 |
| NheI | GCTAGC | 1 cut(s) | 1391 |
| NmeAIII | GCCGAG | 1 cut(s) | 4921 |
| NmuCI | GTSAC | 6 cut(s) | 366, 2591, 2695, 2860, 3182, 3947 |
| NsbI | TGCGCA | 1 cut(s) | 1038 |
| NsiI | ATGCAT | 1 cut(s) | 1498 |
| NspI | RCATGY | 9 cut(s) | 469, 1063, 2231, 2244, 2309, 2374, 2807, 2972, 3641 |
| NspV | TTCGAA | 1 cut(s) | 2010 |
| PaeI | GCATGC | 1 cut(s) | 2374 |
| PaeR7I | CTCGAG | 2 cut(s) | 1683, 3404 |
| PagI | TCATGA | 1 cut(s) | 3882 |
| PaqCI | CACCTGC | 3 cut(s) | 497, 2683, 2848 |
| PauI | GCGCGC | 1 cut(s) | 562 |
| PciI | ACATGT | 5 cut(s) | 2227, 2240, 2305, 2803, 2968 |
| PciSI | GCTCTTC | 1 cut(s) | 5160 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 614, 4291, 4300 |
| PctI | GAATGC | 4 cut(s) | 514, 2655, 2729, 5094 |
| PdiI | GCCGGC | 1 cut(s) | 685 |
| PdmI | GAANNNNTTC | 5 cut(s) | 208, 1605, 1955, 2081, 5153 |
| PinAI | ACCGGT | 2 cut(s) | 642, 4632 |
| PluTI | GGCGCC | 1 cut(s) | 159 |
| Ppu21I | YACGTR | 2 cut(s) | 1538, 2589 |
| PpuMI | RGGWCCY | 2 cut(s) | 2773, 3677 |
| PscI | ACATGT | 5 cut(s) | 2227, 2240, 2305, 2803, 2968 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2430 |
| PshBI | ATTAAT | 1 cut(s) | 3660 |
| Psp124BI | GAGCTC | 2 cut(s) | 230, 300 |
| Psp5II | RGGWCCY | 2 cut(s) | 2773, 3677 |
| Psp6I | CCWGG | 2 cut(s) | 2718, 2883 |
| PspFI | CCCAGC | 5 cut(s) | 1587, 1619, 2642, 3594, 4717 |
| PspGI | CCWGG | 2 cut(s) | 2718, 2883 |
| PspPPI | RGGWCCY | 2 cut(s) | 2773, 3677 |
| PspXI | VCTCGAGB | 1 cut(s) | 3404 |
| PstI | CTGCAG | 3 cut(s) | 2212, 2859, 4021 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1423 |
| PsuI | RGATCY | 4 cut(s) | 2792, 3540, 4583, 4682 |
| PteI | GCGCGC | 1 cut(s) | 562 |
| PvuII | CAGCTG | 3 cut(s) | 674, 1220, 4721 |
| RsaI | GTAC | 7 cut(s) | 8, 1536, 1695, 2823, 3898, 4848, 5108 |
| RsaNI | GTAC | 7 cut(s) | 7, 1535, 1694, 2822, 3897, 4847, 5107 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1734 |
| Rsr2I | CGGWCCG | 1 cut(s) | 645 |
| RsrII | CGGWCCG | 1 cut(s) | 645 |
| SacI | GAGCTC | 2 cut(s) | 230, 300 |
| SapI | GCTCTTC | 1 cut(s) | 5160 |
| SaqAI | TTAA | 9 cut(s) | 453, 762, 867, 1137, 1710, 2039, 2511, 3399, 3660 |
| ScrFI | CCNGG | 3 cut(s) | 118, 2720, 2885 |
| SduI | GDGCHC | 5 cut(s) | 230, 300, 2675, 2840, 3081 |
| SfaNI | GCATC | 9 cut(s) | 670, 925, 1232, 1505, 2144, 3580, 4685, 4882, 5131 |
| SfcI | CTRYAG | 8 cut(s) | 1638, 1965, 2049, 2208, 2855, 3241, 4017, 4560 |
| SfoI | GGCGCC | 1 cut(s) | 157 |
| Sfr274I | CTCGAG | 2 cut(s) | 1683, 3404 |
| SfuI | TTCGAA | 1 cut(s) | 2010 |
| SinI | GGWCC | 8 cut(s) | 645, 919, 1310, 2773, 2938, 3344, 3677, 4635 |
| SlaI | CTCGAG | 2 cut(s) | 1683, 3404 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1734 |
| SmlI | CTYRAG | 7 cut(s) | 1260, 1683, 2142, 2700, 2865, 3404, 3931 |
| SmoI | CTYRAG | 7 cut(s) | 1260, 1683, 2142, 2700, 2865, 3404, 3931 |
| SphI | GCATGC | 1 cut(s) | 2374 |
| SspDI | GGCGCC | 1 cut(s) | 155 |
| SspI | AATATT | 4 cut(s) | 409, 2089, 3718, 4547 |
| SspMI | CTAG | 8 cut(s) | 1392, 2799, 2964, 3354, 4185, 4614, 4646, 4770 |
| SstI | GAGCTC | 2 cut(s) | 230, 300 |
| StyD4I | CCNGG | 3 cut(s) | 116, 2718, 2883 |
| StyI | CCWWGG | 3 cut(s) | 262, 4372, 4966 |
| TaiI | ACGT | 6 cut(s) | 1540, 2591, 3630, 3714, 4462, 4804 |
| TaqII | GACCGA | 1 cut(s) | 2575 |
| TatI | WGTACW | 5 cut(s) | 1693, 2821, 3896, 4846, 5106 |
| TauI | GCSGC | 4 cut(s) | 150, 161, 914, 4808 |
| Tru1I | TTAA | 9 cut(s) | 453, 762, 867, 1137, 1710, 2039, 2511, 3399, 3660 |
| Tru9I | TTAA | 9 cut(s) | 453, 762, 867, 1137, 1710, 2039, 2511, 3399, 3660 |
| TscAI | CASTG | 8 cut(s) | 103, 288, 849, 1171, 1852, 2428, 2475, 3250 |
| TseFI | GTSAC | 6 cut(s) | 366, 2591, 2695, 2860, 3182, 3947 |
| Tsp45I | GTSAC | 6 cut(s) | 366, 2591, 2695, 2860, 3182, 3947 |
| TspGWI | ACGGA | 8 cut(s) | 637, 647, 1917, 2009, 2405, 3848, 3982, 4804 |
| TspRI | CASTG | 8 cut(s) | 103, 288, 849, 1171, 1852, 2428, 2475, 3250 |
| VpaK11BI | GGWCC | 8 cut(s) | 645, 919, 1310, 2773, 2938, 3344, 3677, 4635 |
| VspI | ATTAAT | 1 cut(s) | 3660 |
| XbaI | TCTAGA | 2 cut(s) | 4613, 4645 |
| XceI | RCATGY | 9 cut(s) | 469, 1063, 2231, 2244, 2309, 2374, 2807, 2972, 3641 |
| XhoI | CTCGAG | 2 cut(s) | 1683, 3404 |
| XmiI | GTMKAC | 3 cut(s) | 1270, 3237, 3848 |
| XmnI | GAANNNNTTC | 5 cut(s) | 208, 1605, 1955, 2081, 5153 |
| XspI | CTAG | 8 cut(s) | 1392, 2799, 2964, 3354, 4185, 4614, 4646, 4770 |
| Zsp2I | ATGCAT | 1 cut(s) | 1498 |