RLG00000011257

Auxilin-like protein 1

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
8032783 .. 8039330
6548 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011257

Sequence Viewer

Length: 5424 bp
ATGGAGTACCAGACTTCATCTGTGGCTCTTTCGCAGAAGCTGTCCTCCGGCCACTCCATATACGACGGCGTTTTCACCTCTGCTCCCTCTAAGTTCACTGTGTCGTCTTTCTCTTCCCGGCTCGAAGACTACTGCGAGATTTTCGGCGGCTCAGGCGCCGCCTCCTCTATTCCGGTTCTGGAAGTTCCGGAGCCGAATGAGCGAAAAGCTTCGGTGGATGTTCGGAGCTCGAAGCTTGATTACTCCAATGTCTTCGGTGGCTTTGGCGATTCCGATTTCGCAGTGCGCTATGAGGAGCTCTTTGCTGAGCCGAAGAAAAGGACTAAATTGCACAAAGAAAGCAGGAGACAAGCTGAAAGAGTGTCACCTCCAAAAGAGGCAAAACGATCATGTTCAGAGGAAAATATTGATTTACCAAATGAAGCAGCTTATGAGTCATTTGATGGTGTTAAGAAGTTCAGCATGTCATACAATCAAAGCAACAATAGAAGCAAGAGTTTTGCAGGTGTGCATTCTGTTCCAGCATATACCTGCTTGGTTGATGAGACCGCTCCCTTGCCCGCCACCGAAGGAGATAAATCGGTGTCAATGTCGTCGGTAGCGAAAGAGAGAACAATGGAGGGCAACCGGTCCGTGAAAGATGCCGGCAAACAGGCTTCTGGAGGAGGAGGTGTCAAGGCTCAGAACAATTCTAATTGGAAAAATTCAATTGATGAGTTATTTAACTCGAATAAAACGGGGCAAGGAACTCCTCCTTCAAGCAGTCCTCCATTTTCAAGTCAGGTTTCTGAAGGTGATAAACCAGTGTCGTTAGTAGCAAATGGTGCTAGCAGTGTTAATGGTGTCGAGAGAAAAATGGAGGGCAACCATCACATGAAAGCCGCAGGGGACCACCAAGCTACTGATGCAAGTAAGCAGACCTCTGGAGGAGTTGCCAAGTTTCAGAACAATTTCAAGTGGAGAAGTTCCGGCTCAAATGATAAGTTATTTTATTCAGGGGAAATTGCGCAAGAAACTCGTCCTTCAAACATGCCTCCATTTTCAAGCATGCGTTCTGATGGGGAGGGTGAATTTGAGAAACCAATGGCTTCTATGTTTGGGGTTTTTAATCGTGATACTTTTGAAGGTGCTGACAGTGTTTCCTCACCACCATACTTCGATGAGGAAGTAGACACAAACTCTGTTGCAGCTGCATCTGTTGCTGCTTTGACAAAGGCAATAGAGGAGGCTCAAGCAAGTATACAAATGGCAAAGGAGTTGATGGATAGAAAGAAGTTTGGTCCTCAAAATCGTGTCAAATTGAGCTTTGACAGCAGTATGAAACCTAAGTCGAGAAAGGGCGGTAGATTTGCAGACAAAGTTAGCATATCCAAAGAGACGAAGACTCAGGAACTGTATGACACAGTGGATGTTCCTGTCCATGTTTCCGCTGAGCCAGAACAAGTAACTCCAGTATTTGAAAATGCATCTATAATTAGTGATGTGATGGTAACTGGAGAGGAAGTACGTGAAAAGGAAATTGCTGATAATGCAAGCATATTTACAAAGAAGAAGACCCAGGAATTACAAGAAGAGGTTCATGTCTCTGCTGGGCCAGAACAAGTATCTGTAGCACTTGAAGACACGGATAAACTTAGTGGTGTGATGGAAACTCGAGAGAAAGTACATGGACAGGAATTTAAACTAACTCCAACAGATCACAGGCATGAAGAAGCTGACGACTCAGAAGCAGCAGAACAGTTTTATGAATTTGCTGACACAAGTGAACAAGATGTATCAGAAGCAACAGAACAGTTCTATGAAGTTGCTGACAGCAGTGAACCTGATGTATCAGAAGCGACAGAAGAATTTTATGAATTTGCTGACTCAAATGGACAGCATGATACAGAATTAGAGAATCAAGAAGCCAACAATACAAGGAAAATGTTCCGATCTGTAGATAATGATGAACAGGAGAAGGAAACGGACATGGAAGCCTTTGAAAATCCAGAGCAAGTTGGCAAGACATCAAAAGCAGCTACAGAAGAAGAACAAAGAGAAGTAGAGAATATATTCAATATTGTTGGAGAGGTTTCTGAGTTTGATGAAAATGAGAATGGATTAGCATCATCTCAAGAGGGTCCTAATCAGGAAGATAATGAGAAGCCACAGGAAGCTCCCAGAGAGCATGAAGAAACTGCAAAGCTTACAACAACACATGTAAAGGAAACATGTGAAGAGAAACAAAATGGAGATGACAAGAGGTTTGAAACTCAGGAATTACAGGAGATTGAATATGTGGATATAAAATTGGTGGCTCAGGAGTGGGTTGAAAATGAGAAGATTGACAGGGAGGCTTGCATGTTGGAAGAAAATGAGACGGAACAAACATATGCCGAGAGTGAAGAAGACACTGACAGGAGTCTCAATGAAGATAACAAGGAAGAAATCATCGAGACAGTGAATGACTTATATGATAAGGAAGAGTTTGAAAAGAGACTTAAAGATGACAGCAAGTCTGAAGGAAATGAGAAGCTTCAAGACACGAGACCGAATGAGAAGATACTTGAAGAGGCTACTTGTCACAAGGAAAATGAGACGGAACAAACATATGCCGAGAGTGAAGAAGACACTGACAGGAGTCTCAATGAAGATAACAAGGAAGAAATCATCGAGACAGTGAATGACTTATATGATAAGGAAGAGTTTGAAAAGAGACTTAAAGATGACAGCAAGTCTGAAGGAAATGAGAAGCTTCAAGACACGAGACCGAATGAGAAGATACTTGAAGAGGCTACTTGTCACAAGGAGTGTGAGAATCGCCAAGAAGAGAGTTTTGAATTTGTCGAAGCTGGGAGAATGCAAATACTGATGGATGAGAGCACAGAAAATGAGAAAGTGCAGGTGACTCAAGAGGATCAAAAGAACCTGGAATGCAATTTTGAGGCAGCAGATAACCTCTATGAGCAGGGTGTAAGTGGGGACCTAAACAGCAAACAGGGATCTGCTAGACATGTAGATTGCGACCATGTACTGATGGATGAGAGCACAGAAAATGAGAAACTGCAGGCGACTCAAGAGGATCAAAAGAACCTGGAGTGCAATTCTGAGGCAGCAGATAACCTGTATGAGCAGGGTGTAAGTGGGGACCTAAACAGCAAACAGGGATCCGCTAGACATGTAGATTGCGATCAAGATGTAGAAGAAACTCAGAACTTACCAACAAACAAAGAGGATGGAGGGGTGAGAGAAGTTGCTGAAACTTCAATTCAACTCGAAGAGAATGAGCACCAGACAGAACTGGTTGAAGAGGAGAATGGCATGGCAGAGAAAGAGATATGTGAAACAGATGGCTTGACTCCAAGTGTCAAACTTCCTGAGAGGCCGAAGAAAATGGAAGATGCAACAGAGATCCATTCTTTTGACAAAAATGGAATAAGCGCAAGTGAAAGTGACATGAGCTTTGTGCAAAAGCAAGATGACAAGCTTGCTGGAGAGTCCAATGTAGACTACAGTGTAGGAAGGCAGGTTGAAGAGTGTGAAGAATTGGGAGATATCAATAGTGATATGATGGGAGCTGAAGTTGCTGTGAATCAGGAAAGGAACAAGAATGGTCCCAAATCTAGGAAAAGATGGTTTGGTACTAATGAAGTTTCGGAAACTTTCATTAAACTCGAGGAGGATGGGAATCAATCAGAATTAGTTGAAGAGGAGGATGTTATGGAAGAGAAAGTGATATGTGAAATAGAGGGCTTGGCTTCAGGTGTCAAACTTGCTGAGATACTGAAGCAAATGGAAGATGTAATAGAGATCCATTCTTCGGACAAAAATGGGACAAGTGTATATGGGCAAAAGCAAGATGCCCAGCTTGCCAGAGAGCCTGAAGTAGCCTGCAACGTAGGAAAGCATGTTGAAGAATTGGGAGATATTAATAAGAACATGATGGGACCTGAAGTTGCTACTGTGAATCAGGAGGAGAACGTGAATATTACCAAGTCTTCTCACAGGAAAAGATGGTTTGACAATGGGAAGGATACAAACGTAGCTCAGGCTCCTCATATATTTGGTAGAAAAGCAGGAAGTGTGCTACTGGATAATGAGATGAACACAAGCCTGTATACAAAGATAGAGAAGGAGAATCATCATAAAGTCATGACAAGTCAAAGTACAGAAGTAAATGAGGACAGCCAACAAGCAACCTTGAGGCCTAAAGAGAGTGACACCATTCATAGTTCACTGAAGGAATCGGAACAAGAAAACAATGAAAATCCACAAACAACCTTGTCTGCAGAAGAGAGTGAAACTGACCATAATTCGCAGGAAGTGGAACAAGAGGGTCAAGCAACCCTGAGAGCAAAAGAGAGTGAAACGAACTACACTTCTCAAAAAGAAGTGGAACGAGAAAAGGAGAATCAACAAAAATCTCGGACTGCAAACGAGTTTGAAATTAGTGCTAGTTCACAAAAGGTAGTGGAGCTGGAGAAAGAGCACCTGATTCAGAAAGCAGAAAAACGAAGAGAAAGGGAAAGACAAAAAGAGAAAAGAGCTGTTGAACGAGCAATTCGTGAAGCTCGTGAAAGGTCATTTGCTGATGTCAAAGAAAGAGTGGCTGAAACTCGTCAAAAGTTAATGGCTGAGGCCCAAGGAAGGTTAGGGAAGACTTCTGTGCAGGCTAAAGATACTTCATTAGCTGAGCAGGCTTCAAAGGAAGCCAAACAAAAATGGGAACGTGCTGCTGTTGAAAGAGCAACCACAGAGGCTCGGGATCGTTTCTTAGAAAAAGCATTATCTGCAAAAAAGTCGGTTCCAGAGAAATATTCTGGTGCTTCTACAGAAGGAAAGCAGGCTAAAAGATCTGCTTCTGAGAAATTTTCTGGCGCTTCTAGAGATAATGGGGCGAACCGGTCCTTTGATCTAGAGTCCAAAGGCTCACTCTCTTCAAGCGCATCAAGATCCCCAAATTCTTCAAATCAGTCTGATCCTTCCCCAGCTGAGCGGTCTACTGGAACTGATGGTGAATCAGCTCAAAGGAGTAAAGCTAGGTTGGAGAGGAATCAACGGACAGCAGAACGTGCGGCAAAAGCTCTCGCGGAGAAGAATAATCGTGATCTTCTTGTACAACAAGAGCAAGCTGAGAGAAATAGATTAGCAGAAGTGCTTGATGCCGAGGTCAAGAGGTGGTCAAGTGGGAAGGAGAGAAATTTGCGTGCATTGCTCTCAACACTACAATATATCCTTGGGCCTGATAGTGGTTGGCAGCCGGTTCCTCTTACCGATATTGTTACTGCTGCTGCTGTAAAGAAAGCTTATCGTAAAGCTGCACTCTTTGTTCATCCTGACAAGTTACAGCAACGGGGTGCAAGCATTCAGCAGAAGTACACTTGTGAGAAGGTGTTTGATCTTCTAAAGGATGCTTGGAATAGATTCAGCACGGAAGAGCGATAA

Protein Analysis

1808

Amino Acids

202.56

Weight (kDa)

4.7

Isoelectric Point (pI)

55.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 494, 2872
Acc16I TGCGCA 1 cut(s) 1008
Acc36I ACCTGC 4 cut(s) 494, 539, 2872, 3496
AccB1I GGYRCC 1 cut(s) 155
AccBSI CCGCTC 2 cut(s) 551, 4975
AccI GTMKAC 5 cut(s) 1170, 1240, 3486, 4097, 4979
AccII CGCG 1 cut(s) 5069
AccIII TCCGGA 1 cut(s) 187
AcoI YGGCCR 1 cut(s) 49
AcuI CTGAAG 9 cut(s) 810, 2520, 2739, 3579, 3723, 3785, 3882, 3951, 4238
AcyI GRCGYC 1 cut(s) 156
AfaI GTAC 8 cut(s) 8, 1506, 1665, 3012, 3622, 4147, 5097, 5357
AfiI CCNNNNNNNGG 4 cut(s) 3603, 3799, 4626, 5228
AflIII ACRYGT 4 cut(s) 2197, 2210, 2992, 3157
AgeI ACCGGT 2 cut(s) 627, 4881
AhdI GACNNNNNGTC 2 cut(s) 2494, 2713
AjnI CCWGG 3 cut(s) 1557, 2907, 3072
Alw21I GWGCWC 6 cut(s) 230, 300, 2864, 3029, 3270, 4470
AlwNI CAGNNNCTG 2 cut(s) 40, 1393
Ama87I CYCGRG 3 cut(s) 1653, 3653, 4740
Aor13HI TCCGGA 1 cut(s) 187
AoxI GGCC 6 cut(s) 49, 1592, 3362, 4184, 4617, 5219
ArsI GACNNNNNNTTYG 4 cut(s) 2228, 2260, 3425, 3457
AseI ATTAAT 1 cut(s) 3909
AsiGI ACCGGT 2 cut(s) 627, 4881
Asp700I GAANNNNTTC 6 cut(s) 208, 950, 1575, 1925, 2051, 5402
AspLEI GCGC 6 cut(s) 158, 288, 1009, 3422, 4859, 4925
AsuC2I CCSGG 1 cut(s) 118
AsuHPI GGTGA 8 cut(s) 67, 357, 806, 1079, 1137, 2896, 3235, 5006
AsuNHI GCTAGC 1 cut(s) 827
AvaI CYCGRG 3 cut(s) 1653, 3653, 4740
AvaII GGWCC 9 cut(s) 630, 889, 1280, 2120, 2962, 3127, 3593, 3926, 4884
BaeI ACNNNNGTAYC 2 cut(s) 4005, 4038
BamHI GGATCC 1 cut(s) 3146
BanI GGYRCC 1 cut(s) 155
BanII GRGCYC 2 cut(s) 230, 300
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BauI CACGAG 3 cut(s) 2524, 2743, 4551
BbsI GAAGAC 9 cut(s) 132, 244, 1388, 1559, 1626, 2394, 2613, 3969, 4643
Bbv12I GWGCWC 6 cut(s) 230, 300, 2864, 3029, 3270, 4470
BbvCI CCTCAGC 1 cut(s) 4614
BceAI ACGGC 1 cut(s) 82
BcgI CGANNNNNNTGC 4 cut(s) 998, 1032, 4761, 4795
BciT130I CCWGG 3 cut(s) 1559, 2909, 3074
BciVI GTATCC 1 cut(s) 4006
BcnI CCSGG 1 cut(s) 118
BfaI CTAG 8 cut(s) 828, 2988, 3153, 3603, 4434, 4863, 4895, 5019
BfmI CTRYAG 7 cut(s) 1608, 1935, 2019, 3044, 3490, 4266, 4809
BfoI RGCGCY 2 cut(s) 159, 4860
BfuAI ACCTGC 4 cut(s) 494, 539, 2872, 3496
BfuI GTATCC 1 cut(s) 4006
BglII AGATCT 1 cut(s) 4832
BlpI GCTNAGC 4 cut(s) 306, 1431, 4671, 4971
Bme1390I CCNGG 4 cut(s) 118, 1559, 2909, 3074
Bme18I GGWCC 9 cut(s) 630, 889, 1280, 2120, 2962, 3127, 3593, 3926, 4884
BmeRI GACNNNNNGTC 2 cut(s) 2494, 2713
BmeT110I CYCGRG 3 cut(s) 1653, 3653, 4740
BmrFI CCNGG 4 cut(s) 118, 1559, 2909, 3074
BmtI GCTAGC 1 cut(s) 831
BoxI GACNNNNGTC 2 cut(s) 2400, 2619
BpiI GAAGAC 9 cut(s) 132, 244, 1388, 1559, 1626, 2394, 2613, 3969, 4643
BpmI CTGGAG 7 cut(s) 681, 945, 1434, 1515, 3095, 3492, 4478
Bpu10I CCTNAGC 4 cut(s) 151, 2298, 4026, 4614
Bpu1102I GCTNAGC 4 cut(s) 306, 1431, 4671, 4971
BpuEI CTTGAG 5 cut(s) 1215, 2097, 2874, 3039, 4201
BpuMI CCSGG 1 cut(s) 118
BsaAI YACGTR 1 cut(s) 1508
BsaBI GATNNNNATC 3 cut(s) 2104, 3168, 3666
BsaHI GRCGYC 1 cut(s) 156
BsaI GGTCTC 3 cut(s) 539, 2521, 2740
BsaJI CCNNGG 4 cut(s) 1557, 4621, 5145, 5215
BsaWI WCCGGW 4 cut(s) 172, 187, 627, 4881
BsaXI ACNNNNNCTCC 8 cut(s) 67, 97, 657, 687, 1488, 1518, 3546, 3576
Bsc4I CCNNNNNNNGG 4 cut(s) 3603, 3799, 4626, 5228
Bse118I RCCGGY 4 cut(s) 627, 644, 4881, 5239
Bse1I ACTGG 6 cut(s) 803, 1451, 1498, 3285, 4074, 4987
Bse3DI GCAATG 1 cut(s) 5189
Bse8I GATNNNNATC 3 cut(s) 2104, 3168, 3666
BseAI TCCGGA 1 cut(s) 187
BseBI CCWGG 3 cut(s) 1559, 2909, 3074
BseDI CCNNGG 4 cut(s) 1557, 4621, 5145, 5215
BseGI GGATG 9 cut(s) 223, 1414, 2860, 3025, 3220, 3667, 3700, 5311, 5395
BseJI GATNNNNATC 3 cut(s) 2104, 3168, 3666
BseLI CCNNNNNNNGG 4 cut(s) 3603, 3799, 4626, 5228
BseMI GCAATG 1 cut(s) 5189
BseNI ACTGG 6 cut(s) 803, 1451, 1498, 3285, 4074, 4987
BseYI CCCAGC 4 cut(s) 1589, 2831, 3843, 4966
BsgI GTGCAG 3 cut(s) 2900, 4667, 5283
Bsh1236I CGCG 1 cut(s) 5069
BshFI GGCC 6 cut(s) 51, 1594, 3364, 4186, 4619, 5221
BshNI GGYRCC 1 cut(s) 155
BshTI ACCGGT 2 cut(s) 627, 4881
BsiHKAI GWGCWC 6 cut(s) 230, 300, 2864, 3029, 3270, 4470
BsiHKCI CYCGRG 3 cut(s) 1653, 3653, 4740
BsiSI CCGG 9 cut(s) 48, 118, 173, 188, 628, 645, 969, 4882, 5240
BslFI GGGAC 6 cut(s) 902, 2975, 3140, 3579, 3826, 3939
BslI CCNNNNNNNGG 4 cut(s) 3603, 3799, 4626, 5228
BsmBI CGTCTC 3 cut(s) 1370, 2351, 2570
BsmFI GGGAC 6 cut(s) 902, 2975, 3140, 3579, 3826, 3939
BsmI GAATGC 4 cut(s) 511, 2844, 2918, 5343
BsnI GGCC 6 cut(s) 51, 1594, 3364, 4186, 4619, 5221
Bso31I GGTCTC 3 cut(s) 539, 2521, 2740
BsoBI CYCGRG 3 cut(s) 1653, 3653, 4740
Bsp1286I GDGCHC 6 cut(s) 230, 300, 2864, 3029, 3270, 4470
Bsp13I TCCGGA 1 cut(s) 187
Bsp1407I TGTACA 1 cut(s) 5095
Bsp1720I GCTNAGC 4 cut(s) 306, 1431, 4671, 4971
BspANI GGCC 6 cut(s) 51, 1594, 3364, 4186, 4619, 5221
BspEI TCCGGA 1 cut(s) 187
BspFNI CGCG 1 cut(s) 5069
BspHI TCATGA 1 cut(s) 4131
BspMAI CTGCAG 2 cut(s) 3048, 4270
BspMI ACCTGC 4 cut(s) 494, 539, 2872, 3496
BspOI GCTAGC 1 cut(s) 831
BspQI GCTCTTC 1 cut(s) 5409
BspT107I GGYRCC 1 cut(s) 155
BspTNI GGTCTC 3 cut(s) 539, 2521, 2740
BsrBI CCGCTC 2 cut(s) 551, 4975
BsrDI GCAATG 1 cut(s) 5189
BsrFI RCCGGY 4 cut(s) 627, 644, 4881, 5239
BsrGI TGTACA 1 cut(s) 5095
BsrI ACTGG 6 cut(s) 803, 1451, 1498, 3285, 4074, 4987
BssAI RCCGGY 4 cut(s) 627, 644, 4881, 5239
BssECI CCNNGG 4 cut(s) 1557, 4621, 5145, 5215
BssNAI GTATAC 2 cut(s) 1241, 4098
BssNI GRCGYC 1 cut(s) 156
BssSI CACGAG 3 cut(s) 2524, 2743, 4551
BssT1I CCWWGG 2 cut(s) 4621, 5215
Bst1107I GTATAC 2 cut(s) 1241, 4098
Bst2BI CACGAG 3 cut(s) 2524, 2743, 4551
Bst2UI CCWGG 3 cut(s) 1559, 2909, 3074
BstACI GRCGYC 1 cut(s) 156
BstAPI GCANNNNNTGC 4 cut(s) 824, 1199, 4769, 5051
BstAUI TGTACA 1 cut(s) 5095
BstBAI YACGTR 1 cut(s) 1508
BstF5I GGATG 9 cut(s) 223, 1414, 2860, 3025, 3220, 3667, 3700, 5311, 5395
BstFNI CGCG 1 cut(s) 5069
BstH2I RGCGCY 2 cut(s) 159, 4860
BstHHI GCGC 6 cut(s) 158, 288, 1009, 3422, 4859, 4925
BstNI CCWGG 3 cut(s) 1559, 2909, 3074
BstNSI RCATGY 9 cut(s) 466, 1033, 1051, 2201, 2214, 2344, 2996, 3161, 3890
BstPAI GACNNNNGTC 2 cut(s) 2400, 2619
BstSCI CCNGG 4 cut(s) 116, 1557, 2907, 3072
BstSFI CTRYAG 7 cut(s) 1608, 1935, 2019, 3044, 3490, 4266, 4809
BstUI CGCG 1 cut(s) 5069
BstV2I GAAGAC 9 cut(s) 132, 244, 1388, 1559, 1626, 2394, 2613, 3969, 4643
BstX2I RGATCY 6 cut(s) 2981, 3146, 3390, 3789, 4832, 4931
BstYI RGATCY 6 cut(s) 2981, 3146, 3390, 3789, 4832, 4931
BstZ17I GTATAC 2 cut(s) 1241, 4098
BsuI GTATCC 1 cut(s) 4006
BsuRI GGCC 6 cut(s) 51, 1594, 3364, 4186, 4619, 5221
BtsCI GGATG 9 cut(s) 223, 1414, 2860, 3025, 3220, 3667, 3700, 5311, 5395
BtsI GCAGTG 3 cut(s) 288, 838, 1822
BveI ACCTGC 4 cut(s) 494, 539, 2872, 3496
CaiI CAGNNNCTG 2 cut(s) 40, 1393
CciI TCATGA 1 cut(s) 4131
CfoI GCGC 6 cut(s) 158, 288, 1009, 3422, 4859, 4925
Cfr10I RCCGGY 4 cut(s) 627, 644, 4881, 5239
CpoI CGGWCCG 1 cut(s) 630
Csp6I GTAC 8 cut(s) 7, 1505, 1664, 3011, 3621, 4146, 5096, 5356
CspAI ACCGGT 2 cut(s) 627, 4881
CspI CGGWCCG 1 cut(s) 630
CviQI GTAC 8 cut(s) 7, 1505, 1664, 3011, 3621, 4146, 5096, 5356
DinI GGCGCC 1 cut(s) 157
DraI TTTAAA 1 cut(s) 1681
DriI GACNNNNNGTC 2 cut(s) 2494, 2713
EaeI YGGCCR 1 cut(s) 49
Eam1105I GACNNNNNGTC 2 cut(s) 2494, 2713
Ecl136II GAGCTC 2 cut(s) 228, 298
Eco130I CCWWGG 2 cut(s) 4621, 5215
Eco147I AGGCCT 1 cut(s) 4186
Eco24I GRGCYC 2 cut(s) 230, 300
Eco31I GGTCTC 3 cut(s) 539, 2521, 2740
Eco32I GATATC 1 cut(s) 3535
Eco47I GGWCC 9 cut(s) 630, 889, 1280, 2120, 2962, 3127, 3593, 3926, 4884
Eco53kI GAGCTC 2 cut(s) 228, 298
Eco57I CTGAAG 9 cut(s) 810, 2520, 2739, 3579, 3723, 3785, 3882, 3951, 4238
Eco88I CYCGRG 3 cut(s) 1653, 3653, 4740
EcoICRI GAGCTC 2 cut(s) 228, 298
EcoO109I RGGNCCY 4 cut(s) 2120, 2962, 3127, 3926
EcoRII CCWGG 3 cut(s) 1557, 2907, 3072
EcoRV GATATC 1 cut(s) 3535
EcoT14I CCWWGG 2 cut(s) 4621, 5215
EcoT22I ATGCAT 1 cut(s) 1468
EcoT38I GRGCYC 2 cut(s) 230, 300
EgeI GGCGCC 1 cut(s) 157
EheI GGCGCC 1 cut(s) 157
ErhI CCWWGG 2 cut(s) 4621, 5215
Esp3I CGTCTC 3 cut(s) 1370, 2351, 2570
FalI AAGNNNNNCTT 2 cut(s) 4822, 4854
FaqI GGGAC 6 cut(s) 902, 2975, 3140, 3579, 3826, 3939
FauI CCCGC 1 cut(s) 568
FauNDI CATATG 2 cut(s) 2371, 2590
FblI GTMKAC 5 cut(s) 1170, 1240, 3486, 4097, 4979
FokI GGATG 9 cut(s) 230, 1421, 2867, 3032, 3227, 3674, 3707, 5298, 5402
FriOI GRGCYC 2 cut(s) 230, 300
FspBI CTAG 8 cut(s) 828, 2988, 3153, 3603, 4434, 4863, 4895, 5019
FspI TGCGCA 1 cut(s) 1008
GlaI GCGC 6 cut(s) 157, 287, 1008, 3421, 4858, 4924
GsaI CCCAGC 4 cut(s) 1593, 2835, 3847, 4970
GsuI CTGGAG 7 cut(s) 681, 945, 1434, 1515, 3095, 3492, 4478
HaeII RGCGCY 2 cut(s) 159, 4860
HaeIII GGCC 6 cut(s) 51, 1594, 3364, 4186, 4619, 5221
HapII CCGG 9 cut(s) 48, 118, 173, 188, 628, 645, 969, 4882, 5240
HhaI GCGC 6 cut(s) 158, 288, 1009, 3422, 4859, 4925
Hin1I GRCGYC 1 cut(s) 156
Hin6I GCGC 6 cut(s) 156, 286, 1007, 3420, 4857, 4923
HinP1I GCGC 6 cut(s) 156, 286, 1007, 3420, 4857, 4923
HindIII AAGCTT 7 cut(s) 207, 233, 2183, 2513, 2732, 3464, 5283
HpaII CCGG 9 cut(s) 48, 118, 173, 188, 628, 645, 969, 4882, 5240
HphI GGTGA 8 cut(s) 67, 357, 806, 1079, 1137, 2896, 3235, 5006
Hpy99I CGWCG 2 cut(s) 68, 598
HpyCH4IV ACGT 6 cut(s) 1507, 3876, 3960, 4020, 4708, 5050
HpySE526I ACGT 6 cut(s) 1507, 3876, 3960, 4020, 4708, 5050
Hsp92I GRCGYC 1 cut(s) 156
HspAI GCGC 6 cut(s) 156, 286, 1007, 3420, 4857, 4923
KasI GGCGCC 1 cut(s) 155
Kpn2I TCCGGA 1 cut(s) 187
KroI GCCGGC 1 cut(s) 644
KroNI GCCGGC 1 cut(s) 646
LguI GCTCTTC 1 cut(s) 5409
LmnI GCTCC 9 cut(s) 88, 190, 225, 295, 556, 2161, 3554, 4036, 4453
MaeI CTAG 8 cut(s) 828, 2988, 3153, 3603, 4434, 4863, 4895, 5019
MaeII ACGT 6 cut(s) 1507, 3876, 3960, 4020, 4708, 5050
MbiI CCGCTC 2 cut(s) 551, 4975
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 6 cut(s) 2981, 3146, 3390, 3789, 4832, 4931
MhlI GDGCHC 6 cut(s) 230, 300, 2864, 3029, 3270, 4470
Mly113I GGCGCC 1 cut(s) 156
MmeI TCCRAC 4 cut(s) 1715, 2044, 2325, 5004
Mph1103I ATGCAT 1 cut(s) 1468
MroI TCCGGA 1 cut(s) 187
MroNI GCCGGC 1 cut(s) 644
MroXI GAANNNNTTC 6 cut(s) 208, 950, 1575, 1925, 2051, 5402
MslI CAYNNNNRTG 1 cut(s) 1704
MspA1I CMGCKG 3 cut(s) 1190, 1430, 4970
MspI CCGG 9 cut(s) 48, 118, 173, 188, 628, 645, 969, 4882, 5240
MspR9I CCNGG 4 cut(s) 118, 1559, 2909, 3074
MunI CAATTG 1 cut(s) 708
Mva1269I GAATGC 4 cut(s) 511, 2844, 2918, 5343
MvaI CCWGG 3 cut(s) 1559, 2909, 3074
MvnI CGCG 1 cut(s) 5069
NaeI GCCGGC 1 cut(s) 646
NarI GGCGCC 1 cut(s) 156
NciI CCSGG 1 cut(s) 118
NdeI CATATG 2 cut(s) 2371, 2590
NgoMIV GCCGGC 1 cut(s) 644
NheI GCTAGC 1 cut(s) 827
NmeAIII GCCGAG 3 cut(s) 2401, 2620, 5170
NmuCI GTSAC 6 cut(s) 363, 2561, 2780, 2884, 3431, 4196
NsbI TGCGCA 1 cut(s) 1008
NsiI ATGCAT 1 cut(s) 1468
NspI RCATGY 9 cut(s) 466, 1033, 1051, 2201, 2214, 2344, 2996, 3161, 3890
PaeI GCATGC 1 cut(s) 1051
PaeR7I CTCGAG 2 cut(s) 1653, 3653
PagI TCATGA 1 cut(s) 4131
PaqCI CACCTGC 2 cut(s) 494, 2872
PceI AGGCCT 1 cut(s) 4186
PciI ACATGT 4 cut(s) 2197, 2210, 2992, 3157
PciSI GCTCTTC 1 cut(s) 5409
PcsI WCGNNNNNNNCGW 3 cut(s) 599, 4540, 4549
PctI GAATGC 4 cut(s) 511, 2844, 2918, 5343
PdiI GCCGGC 1 cut(s) 646
PdmI GAANNNNTTC 6 cut(s) 208, 950, 1575, 1925, 2051, 5402
PinAI ACCGGT 2 cut(s) 627, 4881
PluTI GGCGCC 1 cut(s) 159
Ppu21I YACGTR 1 cut(s) 1508
PpuMI RGGWCCY 4 cut(s) 2120, 2962, 3127, 3926
PscI ACATGT 4 cut(s) 2197, 2210, 2992, 3157
PshAI GACNNNNGTC 2 cut(s) 2400, 2619
PshBI ATTAAT 1 cut(s) 3909
Psp124BI GAGCTC 2 cut(s) 230, 300
Psp5II RGGWCCY 4 cut(s) 2120, 2962, 3127, 3926
Psp6I CCWGG 3 cut(s) 1557, 2907, 3072
PspFI CCCAGC 4 cut(s) 1589, 2831, 3843, 4966
PspGI CCWGG 3 cut(s) 1557, 2907, 3072
PspPPI RGGWCCY 4 cut(s) 2120, 2962, 3127, 3926
PspXI VCTCGAGB 1 cut(s) 3653
PstI CTGCAG 2 cut(s) 3048, 4270
PstNI CAGNNNCTG 2 cut(s) 40, 1393
PsuI RGATCY 6 cut(s) 2981, 3146, 3390, 3789, 4832, 4931
PvuII CAGCTG 2 cut(s) 1190, 4970
RsaI GTAC 8 cut(s) 8, 1506, 1665, 3012, 3622, 4147, 5097, 5357
RsaNI GTAC 8 cut(s) 7, 1505, 1664, 3011, 3621, 4146, 5096, 5356
RseI CAYNNNNRTG 1 cut(s) 1704
Rsr2I CGGWCCG 1 cut(s) 630
RsrII CGGWCCG 1 cut(s) 630
SacI GAGCTC 2 cut(s) 230, 300
SapI GCTCTTC 1 cut(s) 5409
ScrFI CCNGG 4 cut(s) 118, 1559, 2909, 3074
SduI GDGCHC 6 cut(s) 230, 300, 2864, 3029, 3270, 4470
SfcI CTRYAG 7 cut(s) 1608, 1935, 2019, 3044, 3490, 4266, 4809
SfoI GGCGCC 1 cut(s) 157
Sfr274I CTCGAG 2 cut(s) 1653, 3653
SinI GGWCC 9 cut(s) 630, 889, 1280, 2120, 2962, 3127, 3593, 3926, 4884
SlaI CTCGAG 2 cut(s) 1653, 3653
SmiMI CAYNNNNRTG 1 cut(s) 1704
SmlI CTYRAG 7 cut(s) 1230, 1653, 2112, 2889, 3054, 3653, 4180
SmoI CTYRAG 7 cut(s) 1230, 1653, 2112, 2889, 3054, 3653, 4180
SphI GCATGC 1 cut(s) 1051
SseBI AGGCCT 1 cut(s) 4186
SspDI GGCGCC 1 cut(s) 155
SspI AATATT 4 cut(s) 406, 2059, 3967, 4796
SspMI CTAG 8 cut(s) 828, 2988, 3153, 3603, 4434, 4863, 4895, 5019
SstI GAGCTC 2 cut(s) 230, 300
StuI AGGCCT 1 cut(s) 4186
StyD4I CCNGG 4 cut(s) 116, 1557, 2907, 3072
StyI CCWWGG 2 cut(s) 4621, 5215
TaiI ACGT 6 cut(s) 1510, 3879, 3963, 4023, 4711, 5053
TaqII GACCGA 2 cut(s) 2545, 2764
TatI WGTACW 5 cut(s) 1663, 3010, 4145, 5095, 5355
TauI GCSGC 4 cut(s) 150, 161, 884, 5057
TseFI GTSAC 6 cut(s) 363, 2561, 2780, 2884, 3431, 4196
Tsp45I GTSAC 6 cut(s) 363, 2561, 2780, 2884, 3431, 4196
TspGWI ACGGA 6 cut(s) 622, 1640, 1979, 2375, 2594, 5053
VpaK11BI GGWCC 9 cut(s) 630, 889, 1280, 2120, 2962, 3127, 3593, 3926, 4884
VspI ATTAAT 1 cut(s) 3909
XbaI TCTAGA 2 cut(s) 4862, 4894
XceI RCATGY 9 cut(s) 466, 1033, 1051, 2201, 2214, 2344, 2996, 3161, 3890
XhoI CTCGAG 2 cut(s) 1653, 3653
XmiI GTMKAC 5 cut(s) 1170, 1240, 3486, 4097, 4979
XmnI GAANNNNTTC 6 cut(s) 208, 950, 1575, 1925, 2051, 5402
XspI CTAG 8 cut(s) 828, 2988, 3153, 3603, 4434, 4863, 4895, 5019
Zsp2I ATGCAT 1 cut(s) 1468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.