Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011528

Physical Location & Seq

Genomic Coordinates Forward (+)

45545675 .. 45548052

Gene Structure 2378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0304100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1575 bp

ATGGCTAAGCCTATAGCTCTCACCTTTTCTCTCTGCTTGCTTTTCCTCTTCCACAGCTGCTTAGCAGCTCGCCAACAATCTCAGTCGAGCCAGCAGAATGAGTGCCAACTAGATCAGCTCCAAGCCCGCGAACCTGATAACCGCATTAAGACTGAAGCGGGTAGGATTGAGTCCTGGGACTACAACCAGGACGACTTCCAGTGTGCTGGTGTTGCCGTTCAACGAATTACCATTGAAAGAAATGGCCTTCACTTGCCTTCTTACACCCACGCTCCACAACTCACTTATGTCGTCCAAGGCAATGGTTTTCTATCAACTGTTTTCCCTGGCTGTCCTGAAACTTTCGAAGAATCTGAGCAATCTGATGAAGAACAACAAGGCCAGCAAGGGCGCCGTGGACAGCAAGGTCGTGGACAACAAGAGCAGCAAGAACAAGAAGAACACCAGAAGGTTCGACGCATCAGAGAAGGTGATGTGATTGCTATTCCTGCTGGAGTCACTTACTGGTCCTACAACGACGGTGACCAACCTCTTGTTGCTGTCAATCTTCTTGATATCAGCAACCAACAAAACCAGCTTGACCGTAACCCCAGGAGATTCTATCTTGCTGGTAACCCACAAGATGAGTTTAACCAACAAGGGCAAAGCCAGAGTCGACGGGGCCAGCAAGGACGTGGACAACAAGGGCAAGGCCAAAGTCAATGGGACCAGGACCAGCAACAGCGACAGCATGGTGGAAGGAGCAGGCACCAGCAACAACAACAAGGAAACAACAACAACAACATCTTCGCCGGCTTCAACACACAGCTTCTCGCTGACGCTCTGAACATCGACCAACAGACTGCCCAGCAGCTTCAGGGACAAAACGACAACCGACCCCAAATTGTGAGAGTTAGAGGACGTCTTGATTTCATCGAACCACCACGATCACAACAGGAGGAAAGACAACAACAGGGAATACAGAGACAACAGGGACAACAACGACAGAATGGTTTTGAGGAGACATTCTGTAACTTCAGGATCAGAGAGAATATTGGCAGGCCTTCACGCGCCGACGTCTTCAGTCGCCAAGCTGGTCGCATCAGCACCCTCAACAGCTTTAAGTTGCCTATTCTCAGGTACCTTGACCTCAGCGCTGAGAGAGGCTTCTTCTACAATAATGCTATCTACAGTCCTCACTGGAACTTGAACGCCCATGAAGTCTACTACGTCATTAGAGGTGGTGCTAGGGTTCAGGTTGTGAATGACAATGGCCAGGCCATCTTGGACAATGAGGTCCGCCAGGGACAGCTCTTCATAGTGCCACAGAACCATGCAGTGTTGCAGAAGGCTAGCAACAATGGATACGAGTACATTGCTTTCAAGACCCAAGATAATGCTAAGATTAACACTCTTGCCGGCCGGACCTCAGTCTTGCGGGCACTCCCCGACGTGGTCCTCGCTAACGCATACCAGATTGATCGACAACAGGCAAGGACTCTCAAGTACAACAGGCAGGAGACTGTTGCTTTGAGCTCATCAAGGTCTTCTCGATCCCAGAGGAACTGGTGGGATATTGCTGAAATGTTTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

524

Amino Acids

60.11

Weight (kDa)

7.67

Isoelectric Point (pI)

63.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 206	3.9e-28	Cupin
Cupin_1	PF00190	344 - 491	3.9e-39	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011528)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g39550 FvH4_2g39550 FvH4_2g39550
malus_domestica	MD08G1028800.v1.1 MD15G1024300.v1.1
prunus_persica	Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1
pyrus_communis	pycom15g02090
rosa_chinensis	RchiOBHm_Chr6g0301361
rosa_laevigata	RLG00000011257
rosa_multiflora	Rmu_sc0013354.1_g000026
rosa_roxburghii	Rroxscaffold_7G00166880
rosa_rugosa	Rorug06G0304100 Rorug06G0304200
rosa_samantha	Rh6AG417600 Rh6BG424300 Rh6CG431400 Rh6DG417300
rosa_wichuraiana	Rw6G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	405, 1274
AatII	GACGTC	2 cut(s)	904, 1059
Acc65I	GGTACC	1 cut(s)	1119
AccB1I	GGYRCC	3 cut(s)	390, 747, 1119
AccI	GTMKAC	2 cut(s)	655, 1203
AccII	CGCG	2 cut(s)	129, 1050
AciI	CCGC	5 cut(s)	127, 142, 158, 1279, 1417
AclWI	GGATC	2 cut(s)	1028, 1527
AcoI	YGGCCR	2 cut(s)	1252, 1399
AcuI	CTGAAG	4 cut(s)	174, 839, 1000, 1045
AcyI	GRCGYC	3 cut(s)	391, 901, 1056
AfaI	GTAC	3 cut(s)	1121, 1352, 1487
AfeI	AGCGCT	1 cut(s)	1135
AfiI	CCNNNNNNNGG	1 cut(s)	1432
AgsI	TTSAA	5 cut(s)	221, 236, 799, 1189, 1363
AjiI	CACGTC	2 cut(s)	674, 1432
AjnI	CCWGG	7 cut(s)	173, 186, 325, 590, 708, 1254, 1281
Alw21I	GWGCWC	1 cut(s)	1517
Alw26I	GTCTC	3 cut(s)	958, 995, 1493
AlwI	GGATC	2 cut(s)	1028, 1527
Aor51HI	AGCGCT	1 cut(s)	1135
AoxI	GGCC	8 cut(s)	244, 379, 661, 691, 1040, 1252, 1257, 1399
ApeKI	GCWGC	4 cut(s)	57, 65, 424, 850
ArsI	GACNNNNNNTTYG	4 cut(s)	637, 669, 1492, 1524
Asp718I	GGTACC	1 cut(s)	1119
AspLEI	GCGC	3 cut(s)	393, 1052, 1136
AspS9I	GGNCC	7 cut(s)	507, 661, 706, 712, 1276, 1404, 1435
AsuHPI	GGTGA	3 cut(s)	13, 482, 533
AsuII	TTCGAA	1 cut(s)	345
AsuNHI	GCTAGC	1 cut(s)	1331
AvaII	GGWCC	6 cut(s)	507, 706, 712, 1276, 1404, 1435
BaeGI	GKGCMC	1 cut(s)	1423
BalI	TGGCCA	1 cut(s)	1254
BanI	GGYRCC	3 cut(s)	390, 747, 1119
BanII	GRGCYC	1 cut(s)	1517
BbsI	GAAGAC	2 cut(s)	1051, 1518
Bbv12I	GWGCWC	1 cut(s)	1517
BbvCI	CCTCAGC	1 cut(s)	1130
BbvI	GCAGC	4 cut(s)	44, 77, 436, 862
BccI	CCATC	1 cut(s)	1268
BceAI	ACGGC	2 cut(s)	200, 378
BcgI	CGANNNNNNTGC	2 cut(s)	1337, 1371
BciT130I	CCWGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
BciVI	GTATCC	1 cut(s)	1337
BcoDI	GTCTC	3 cut(s)	958, 995, 1493
BfaI	CTAG	3 cut(s)	110, 1227, 1332
BfmI	CTRYAG	2 cut(s)	12, 1168
BfoI	RGCGCY	2 cut(s)	394, 1137
BfuI	GTATCC	1 cut(s)	1337
BisI	GCNGC	4 cut(s)	58, 66, 425, 851
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	4 cut(s)	59, 67, 426, 852
Bme1390I	CCNGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
Bme18I	GGWCC	6 cut(s)	507, 706, 712, 1276, 1404, 1435
BmgBI	CACGTC	2 cut(s)	674, 1432
BmgT120I	GGNCC	7 cut(s)	507, 661, 706, 712, 1276, 1404, 1435
BmiI	GGNNCC	5 cut(s)	392, 662, 707, 749, 1121
BmrFI	CCNGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
BmsI	GCATC	2 cut(s)	468, 1089
BmtI	GCTAGC	1 cut(s)	1335
BoxI	GACNNNNGTC	1 cut(s)	1409
BpiI	GAAGAC	2 cut(s)	1051, 1518
BpmI	CTGGAG	1 cut(s)	513
Bpu10I	CCTNAGC	1 cut(s)	1130
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
Bpu14I	TTCGAA	1 cut(s)	345
BpuEI	CTTGAG	1 cut(s)	1466
BsaHI	GRCGYC	3 cut(s)	391, 901, 1056
BsaJI	CCNNGG	6 cut(s)	174, 295, 325, 394, 590, 1282
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	1 cut(s)	1432
Bse118I	RCCGGY	2 cut(s)	791, 1397
Bse1I	ACTGG	4 cut(s)	199, 509, 1184, 1550
Bse3DI	GCAATG	2 cut(s)	307, 1353
BseBI	CCWGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
BseDI	CCNNGG	6 cut(s)	174, 295, 325, 394, 590, 1282
BseLI	CCNNNNNNNGG	1 cut(s)	1432
BseMI	GCAATG	2 cut(s)	307, 1353
BseMII	CTCAG	6 cut(s)	95, 345, 1128, 1129, 1144, 1422
BseNI	ACTGG	4 cut(s)	199, 509, 1184, 1550
BseRI	GAGGAG	1 cut(s)	1013
BseSI	GKGCMC	1 cut(s)	1423
BseX3I	CGGCCG	1 cut(s)	1399
BseXI	GCAGC	4 cut(s)	44, 77, 436, 862
BseYI	CCCAGC	1 cut(s)	846
Bsh1236I	CGCG	2 cut(s)	129, 1050
Bsh1285I	CGRYCG	1 cut(s)	1402
BshFI	GGCC	8 cut(s)	246, 381, 663, 693, 1042, 1254, 1259, 1401
BshNI	GGYRCC	3 cut(s)	390, 747, 1119
BsiEI	CGRYCG	1 cut(s)	1402
BsiHKAI	GWGCWC	1 cut(s)	1517
BsiSI	CCGG	3 cut(s)	792, 1398, 1402
BslFI	GGGAC	5 cut(s)	191, 719, 873, 987, 1299
BslI	CCNNNNNNNGG	1 cut(s)	1432
BsmAI	GTCTC	3 cut(s)	958, 995, 1493
BsmFI	GGGAC	5 cut(s)	191, 719, 873, 987, 1299
BsnI	GGCC	8 cut(s)	246, 381, 663, 693, 1042, 1254, 1259, 1401
Bsp119I	TTCGAA	1 cut(s)	345
Bsp1286I	GDGCHC	2 cut(s)	1423, 1517
Bsp143I	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
BspACI	CCGC	5 cut(s)	127, 142, 158, 1279, 1417
BspANI	GGCC	8 cut(s)	246, 381, 663, 693, 1042, 1254, 1259, 1401
BspCNI	CTCAG	6 cut(s)	94, 346, 1128, 1129, 1143, 1421
BspFNI	CGCG	2 cut(s)	129, 1050
BspLI	GGNNCC	5 cut(s)	392, 662, 707, 749, 1121
BspOI	GCTAGC	1 cut(s)	1335
BspPI	GGATC	2 cut(s)	1028, 1527
BspQI	GCTCTTC	1 cut(s)	1298
BspT104I	TTCGAA	1 cut(s)	345
BspT107I	GGYRCC	3 cut(s)	390, 747, 1119
BsrDI	GCAATG	2 cut(s)	307, 1353
BsrFI	RCCGGY	2 cut(s)	791, 1397
BsrI	ACTGG	4 cut(s)	199, 509, 1184, 1550
BssAI	RCCGGY	2 cut(s)	791, 1397
BssECI	CCNNGG	6 cut(s)	174, 295, 325, 394, 590, 1282
BssMI	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
BssNI	GRCGYC	3 cut(s)	391, 901, 1056
BssT1I	CCWWGG	1 cut(s)	295
Bst2UI	CCWGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
Bst4CI	ACNGT	5 cut(s)	319, 521, 584, 1172, 1504
Bst6I	CTCTTC	2 cut(s)	53, 1298
BstACI	GRCGYC	3 cut(s)	391, 901, 1056
BstBI	TTCGAA	1 cut(s)	345
BstDEI	CTNAG	9 cut(s)	6, 61, 81, 354, 1115, 1130, 1137, 1380, 1408
BstDSI	CCRYGG	1 cut(s)	394
BstEII	GGTNACC	2 cut(s)	521, 611
BstFNI	CGCG	2 cut(s)	129, 1050
BstH2I	RGCGCY	2 cut(s)	394, 1137
BstHHI	GCGC	3 cut(s)	393, 1052, 1136
BstKTI	GATC	5 cut(s)	115, 929, 1023, 1462, 1535
BstMAI	GTCTC	3 cut(s)	958, 995, 1493
BstMBI	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
BstMCI	CGRYCG	1 cut(s)	1402
BstMWI	GCNNNNNNNGC	2 cut(s)	212, 488
BstNI	CCWGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
BstPAI	GACNNNNGTC	1 cut(s)	1409
BstPI	GGTNACC	2 cut(s)	521, 611
BstSCI	CCNGG	7 cut(s)	173, 186, 325, 590, 708, 1254, 1281
BstSFI	CTRYAG	2 cut(s)	12, 1168
BstSLI	GKGCMC	1 cut(s)	1423
BstUI	CGCG	2 cut(s)	129, 1050
BstV1I	GCAGC	4 cut(s)	44, 77, 436, 862
BstV2I	GAAGAC	2 cut(s)	1051, 1518
BstXI	CCANNNNNNTGG	2 cut(s)	206, 302
BstZI	CGGCCG	1 cut(s)	1399
BsuI	GTATCC	1 cut(s)	1337
BsuRI	GGCC	8 cut(s)	246, 381, 663, 693, 1042, 1254, 1259, 1401
BtgI	CCRYGG	1 cut(s)	394
BtrI	CACGTC	2 cut(s)	674, 1432
BtsI	GCAGTG	1 cut(s)	1323
BtsIMutI	CAGTG	3 cut(s)	206, 1177, 1323
CfoI	GCGC	3 cut(s)	393, 1052, 1136
Cfr10I	RCCGGY	2 cut(s)	791, 1397
Cfr13I	GGNCC	7 cut(s)	507, 661, 706, 712, 1276, 1404, 1435
CseI	GACGC	2 cut(s)	465, 827
Csp6I	GTAC	3 cut(s)	1120, 1351, 1486
CviAII	CATG	3 cut(s)	731, 1196, 1313
CviQI	GTAC	3 cut(s)	1120, 1351, 1486
DdeI	CTNAG	9 cut(s)	6, 61, 81, 354, 1115, 1130, 1137, 1380, 1408
DinI	GGCGCC	1 cut(s)	392
DpnI	GATC	5 cut(s)	114, 928, 1022, 1461, 1534
DpnII	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
DrdI	GACNNNNNNGTC	2 cut(s)	405, 1274
DseDI	GACNNNNNNGTC	2 cut(s)	405, 1274
EaeI	YGGCCR	2 cut(s)	1252, 1399
EagI	CGGCCG	1 cut(s)	1399
Eam1104I	CTCTTC	2 cut(s)	53, 1298
EarI	CTCTTC	2 cut(s)	53, 1298
EciI	GGCGGA	1 cut(s)	1268
Ecl136II	GAGCTC	1 cut(s)	1515
EclXI	CGGCCG	1 cut(s)	1399
Eco130I	CCWWGG	1 cut(s)	295
Eco147I	AGGCCT	1 cut(s)	1042
Eco24I	GRGCYC	1 cut(s)	1517
Eco32I	GATATC	1 cut(s)	556
Eco47I	GGWCC	6 cut(s)	507, 706, 712, 1276, 1404, 1435
Eco47III	AGCGCT	1 cut(s)	1135
Eco52I	CGGCCG	1 cut(s)	1399
Eco53kI	GAGCTC	1 cut(s)	1515
Eco57I	CTGAAG	4 cut(s)	174, 839, 1000, 1045
Eco91I	GGTNACC	2 cut(s)	521, 611
EcoICRI	GAGCTC	1 cut(s)	1515
EcoO65I	GGTNACC	2 cut(s)	521, 611
EcoRII	CCWGG	7 cut(s)	173, 186, 325, 590, 708, 1254, 1281
EcoRV	GATATC	1 cut(s)	556
EcoT14I	CCWWGG	1 cut(s)	295
EcoT38I	GRGCYC	1 cut(s)	1517
EgeI	GGCGCC	1 cut(s)	392
EheI	GGCGCC	1 cut(s)	392
ErhI	CCWWGG	1 cut(s)	295
FaeI	CATG	3 cut(s)	734, 1199, 1316
FaiI	YATR	8 cut(s)	14, 288, 732, 1197, 1298, 1314, 1450, 1573
FaqI	GGGAC	5 cut(s)	191, 719, 873, 987, 1299
FatI	CATG	3 cut(s)	730, 1195, 1312
FauI	CCCGC	3 cut(s)	134, 151, 1410
FblI	GTMKAC	2 cut(s)	655, 1203
Fnu4HI	GCNGC	4 cut(s)	58, 66, 425, 851
FriOI	GRGCYC	1 cut(s)	1517
Fsp4HI	GCNGC	4 cut(s)	58, 66, 425, 851
FspBI	CTAG	3 cut(s)	110, 1227, 1332
GlaI	GCGC	3 cut(s)	392, 1051, 1135
GluI	GCNGC	4 cut(s)	58, 66, 425, 851
GsaI	CCCAGC	1 cut(s)	850
GsuI	CTGGAG	1 cut(s)	513
HaeII	RGCGCY	2 cut(s)	394, 1137
HaeIII	GGCC	8 cut(s)	246, 381, 663, 693, 1042, 1254, 1259, 1401
HapII	CCGG	3 cut(s)	792, 1398, 1402
HgaI	GACGC	2 cut(s)	465, 827
HhaI	GCGC	3 cut(s)	393, 1052, 1136
Hin1I	GRCGYC	3 cut(s)	391, 901, 1056
Hin1II	CATG	3 cut(s)	734, 1199, 1316
Hin6I	GCGC	3 cut(s)	391, 1050, 1134
HinP1I	GCGC	3 cut(s)	391, 1050, 1134
HincII	GTYRAC	1 cut(s)	656
HindII	GTYRAC	1 cut(s)	656
HinfI	GANTC	6 cut(s)	170, 350, 495, 597, 652, 1477
HpaII	CCGG	3 cut(s)	792, 1398, 1402
HphI	GGTGA	3 cut(s)	13, 482, 533
Hpy166II	GTNNAC	5 cut(s)	398, 413, 656, 677, 1204
Hpy188I	TCNGA	5 cut(s)	355, 364, 464, 825, 1025
Hpy188III	TCNNGA	6 cut(s)	335, 551, 905, 1018, 1363, 1530
Hpy8I	GTNNAC	5 cut(s)	398, 413, 656, 677, 1204
Hpy99I	CGWCG	5 cut(s)	459, 521, 660, 1058, 1433
HpyAV	CCTTC	7 cut(s)	257, 267, 442, 461, 732, 1053, 1321
HpyCH4III	ACNGT	5 cut(s)	319, 521, 584, 1172, 1504
HpyCH4IV	ACGT	5 cut(s)	673, 901, 1056, 1209, 1431
HpyCH4V	TGCA	2 cut(s)	1316, 1324
HpyF10VI	GCNNNNNNNGC	2 cut(s)	212, 488
HpyF3I	CTNAG	9 cut(s)	6, 61, 81, 354, 1115, 1130, 1137, 1380, 1408
HpySE526I	ACGT	5 cut(s)	673, 901, 1056, 1209, 1431
Hsp92I	GRCGYC	3 cut(s)	391, 901, 1056
Hsp92II	CATG	3 cut(s)	734, 1199, 1316
HspAI	GCGC	3 cut(s)	391, 1050, 1134
KasI	GGCGCC	1 cut(s)	390
KpnI	GGTACC	1 cut(s)	1123
KroI	GCCGGC	2 cut(s)	791, 1397
KroNI	GCCGGC	2 cut(s)	793, 1399
Kzo9I	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
LguI	GCTCTTC	1 cut(s)	1298
LmnI	GCTCC	3 cut(s)	123, 277, 741
Lsp1109I	GCAGC	4 cut(s)	44, 77, 436, 862
LweI	GCATC	2 cut(s)	468, 1089
MaeI	CTAG	3 cut(s)	110, 1227, 1332
MaeII	ACGT	5 cut(s)	673, 901, 1056, 1209, 1431
MaeIII	GTNAC	5 cut(s)	496, 521, 584, 611, 1010
MalI	GATC	5 cut(s)	114, 928, 1022, 1461, 1534
MboI	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
MhlI	GDGCHC	2 cut(s)	1423, 1517
MlsI	TGGCCA	1 cut(s)	1254
MluCI	AATT	2 cut(s)	225, 882
MluNI	TGGCCA	1 cut(s)	1254
Mly113I	GGCGCC	1 cut(s)	391
MlyI	GAGTC	4 cut(s)	179, 504, 661, 1471
Mox20I	TGGCCA	1 cut(s)	1254
MroNI	GCCGGC	2 cut(s)	791, 1397
MscI	TGGCCA	1 cut(s)	1254
MseI	TTAA	4 cut(s)	147, 630, 1101, 1386
Msp20I	TGGCCA	1 cut(s)	1254
MspA1I	CMGCKG	1 cut(s)	57
MspI	CCGG	3 cut(s)	792, 1398, 1402
MspR9I	CCNGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
MvaI	CCWGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
MvnI	CGCG	2 cut(s)	129, 1050
MwoI	GCNNNNNNNGC	2 cut(s)	212, 488
NaeI	GCCGGC	2 cut(s)	793, 1399
NarI	GGCGCC	1 cut(s)	391
NdeII	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
NgoMIV	GCCGGC	2 cut(s)	791, 1397
NheI	GCTAGC	1 cut(s)	1331
NlaIII	CATG	3 cut(s)	734, 1199, 1316
NlaIV	GGNNCC	5 cut(s)	392, 662, 707, 749, 1121
NmuCI	GTSAC	2 cut(s)	496, 521
NspV	TTCGAA	1 cut(s)	345
PceI	AGGCCT	1 cut(s)	1042
PciSI	GCTCTTC	1 cut(s)	1298
PdiI	GCCGGC	2 cut(s)	793, 1399
PfeI	GAWTC	2 cut(s)	350, 597
PflFI	GACNNNGTC	1 cut(s)	1433
PkrI	GCNGC	4 cut(s)	59, 67, 426, 852
PleI	GAGTC	4 cut(s)	178, 503, 660, 1471
PluTI	GGCGCC	1 cut(s)	394
PpsI	GAGTC	4 cut(s)	178, 503, 660, 1471
PshAI	GACNNNNGTC	1 cut(s)	1409
Psp124BI	GAGCTC	1 cut(s)	1517
Psp6I	CCWGG	7 cut(s)	173, 186, 325, 590, 708, 1254, 1281
PspEI	GGTNACC	2 cut(s)	521, 611
PspFI	CCCAGC	1 cut(s)	846
PspGI	CCWGG	7 cut(s)	173, 186, 325, 590, 708, 1254, 1281
PspN4I	GGNNCC	5 cut(s)	392, 662, 707, 749, 1121
PspPI	GGNCC	7 cut(s)	507, 661, 706, 712, 1276, 1404, 1435
PsyI	GACNNNGTC	1 cut(s)	1433
PvuII	CAGCTG	1 cut(s)	57
RsaI	GTAC	3 cut(s)	1121, 1352, 1487
RsaNI	GTAC	3 cut(s)	1120, 1351, 1486
SacI	GAGCTC	1 cut(s)	1517
SalI	GTCGAC	1 cut(s)	654
SapI	GCTCTTC	1 cut(s)	1298
SaqAI	TTAA	4 cut(s)	147, 630, 1101, 1386
SatI	GCNGC	4 cut(s)	58, 66, 425, 851
Sau3AI	GATC	5 cut(s)	112, 926, 1020, 1459, 1532
Sau96I	GGNCC	7 cut(s)	507, 661, 706, 712, 1276, 1404, 1435
SchI	GAGTC	4 cut(s)	179, 504, 661, 1471
ScrFI	CCNGG	7 cut(s)	175, 188, 327, 592, 710, 1256, 1283
SduI	GDGCHC	2 cut(s)	1423, 1517
SfaNI	GCATC	2 cut(s)	468, 1089
SfcI	CTRYAG	2 cut(s)	12, 1168
SfoI	GGCGCC	1 cut(s)	392
SfuI	TTCGAA	1 cut(s)	345
SinI	GGWCC	6 cut(s)	507, 706, 712, 1276, 1404, 1435
SmlI	CTYRAG	1 cut(s)	1481
SmoI	CTYRAG	1 cut(s)	1481
Sse9I	AATT	2 cut(s)	225, 882
SseBI	AGGCCT	1 cut(s)	1042
SsiI	CCGC	5 cut(s)	127, 142, 158, 1279, 1417
SspDI	GGCGCC	1 cut(s)	390
SspI	AATATT	1 cut(s)	1033
SspMI	CTAG	3 cut(s)	110, 1227, 1332
SstI	GAGCTC	1 cut(s)	1517
StuI	AGGCCT	1 cut(s)	1042
StyD4I	CCNGG	7 cut(s)	173, 186, 325, 590, 708, 1254, 1281
StyI	CCWWGG	1 cut(s)	295
TaaI	ACNGT	5 cut(s)	319, 521, 584, 1172, 1504
TaiI	ACGT	5 cut(s)	676, 904, 1059, 1212, 1434
TaqI	TCGA	8 cut(s)	86, 345, 454, 655, 831, 915, 1462, 1531
TasI	AATT	2 cut(s)	225, 882
TatI	WGTACW	2 cut(s)	1350, 1485
TfiI	GAWTC	2 cut(s)	350, 597
Tru1I	TTAA	4 cut(s)	147, 630, 1101, 1386
Tru9I	TTAA	4 cut(s)	147, 630, 1101, 1386
TscAI	CASTG	3 cut(s)	206, 1184, 1323
TseFI	GTSAC	2 cut(s)	496, 521
TseI	GCWGC	4 cut(s)	57, 65, 424, 850
Tsp45I	GTSAC	2 cut(s)	496, 521
TspDTI	ATGAA	4 cut(s)	381, 901, 1212, 1285
TspRI	CASTG	3 cut(s)	206, 1184, 1323
Tth111I	GACNNNGTC	1 cut(s)	1433
VpaK11BI	GGWCC	6 cut(s)	507, 706, 712, 1276, 1404, 1435
XcmI	CCANNNNNNNNNTGG	1 cut(s)	671
XmiI	GTMKAC	2 cut(s)	655, 1203
XspI	CTAG	3 cut(s)	110, 1227, 1332
ZraI	GACGTC	2 cut(s)	902, 1057

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.