Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0011528

Physical Location & Seq

Genomic Coordinates Forward (+)

45557089 .. 45559108

Gene Structure 2020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0304200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGCTAAGCCTATAGCTCTCGCCTTTTCTCTTTGCTTGCTTGTCCTCTTCCACAGCTGCTTAGCAGCTCGCCAACAATCTCAGTCAAGCCAGCAGAACGAGTGCCAGCTAGATCAGCTCCAAGCTCGCGAACCTGATAACCGCATTGAAACTGAAGCGGGTAGGATCGAGTCCTGGGACTACAACCGCGACGACTTCCAGTGCGCTGGTGTTGCTGTTCAACGAATCACCATTGAAAGAAATGGCCTTCACTTGCCTTCTTACACCCACGCTCCACAACTCATTTACATAGTCCAAGGAAGTGGTTTTCTATCTACTGTATTTCCTGGCTGTCCTGAGACTTTCGAAGAATCTGAACAATCTGATGAAGAACAACAAGGGCAAGGGCAGCAGGGGCGCCATGGACAGCAAGGTCGTGGACAACGGGGTCAACAAGAACAAGAAGAGGAAGAACAACAACAACACCAACGCCAACAGGGACAACAAGGCCATGGACAGCATGATAGACAACAAGGACAGCAAGGCCAACGGGGACAAGAGAGCTTCGAACAGCTAGACAGACACCAGAAGGTTCGACGCATAAAAGAAGGTGATATTATTGCTATTCCTGCCGGAGTCACCTACTGGTCCTACAATGACGGTGACCAACCTCTTGTTGCTGTCAGTCTTCTTGACATTAGCAACAACCAAAACCAGCTTGATCGTAACCCTAGGAGATTCTATCTTGCTGGTAACCCACAAGATGAGTTTAACCAACAAGGGCAAAGCCAGAGTCGAAGGGGCCAGCAAGGACGTGGACAACAAGGGCAAGGCCAAAGTCAATGGGACCAGGACCAGGACCAGCAACAACAACAGCAAGGAGGAAGGAGCAGGCACCAGCAACAACAGCATGGAAACAACAACAACAACATCTTCGCTGGCTTCAACACACAGCTCCTCGCTGACGCTCTGAACATTGACCAACAGACTGCGCAGCAGCTTCAGGGACAAAACGACAACAGACCCCAAATCGTCAGAGTTAGAGGACGTCTTGATTTTATCCAGCCGCCACAGTCACAACAGAAGGAAAGACAAGAACAGGGAATTCAGAGACAACAGGGACAAAATGGTCTTGAGGAAACTCTCTGCAACTGGAAGATCAGAGAGAATATTGGCAGGCCTTCACGTGCTGACGTCTTCAGTCCCCAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAAGTTGCCTATTCTGAGGTACCTTGACCTCAGCGCTGAGAGAGGCTTCTTCTACAATAACTTGAACGCCCACGAAGTGTACTACGTCATTAGAGGTAGCGCTAGGGTTCAGGTTGTGAACGACAACGGCCAGGCCATCTTGGACAACGAAGTCCGCCAGGGACAGCTCTTCATTGTGCCACAGAACCACGCAGTGTTACAAAAGGCTAGCAACAACGGCTACGAGTACGTTGCCTTCAAGACCCAGGACAATGCCAAGATTAACACTCTGGCAGGCCGGACCTCAGTCCTGCGGGCACTCCCCGACGTCGTCCTTGCTAACGCATACCAGATTGACCGACAACAGGCAAGGAATCTCAAATACAACAGACAGGAGACTGTTGCTTTGAGCTCTTCAAGGTCTTCCCAATCCCAGAGGAGCTGGTGGGCTATTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0006898 GO:0008150 GO:0009504 GO:0016020 GO:0016192 GO:0031982 GO:0043226 GO:0043227 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0071944 GO:0072583 GO:0098657

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

551

Amino Acids

62.76

Weight (kDa)

6.48

Isoelectric Point (pI)

62.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 246	1.5e-25	Cupin
Cupin_1	PF00190	383 - 522	4.3e-30	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011528)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g39550 FvH4_2g39550 FvH4_2g39550
malus_domestica	MD08G1028800.v1.1 MD15G1024300.v1.1
prunus_persica	Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1
pyrus_communis	pycom15g02090
rosa_chinensis	RchiOBHm_Chr6g0301361
rosa_laevigata	RLG00000011257
rosa_multiflora	Rmu_sc0013354.1_g000026
rosa_roxburghii	Rroxscaffold_7G00166880
rosa_rugosa	Rorug06G0304100 Rorug06G0304200
rosa_samantha	Rh6AG417600 Rh6BG424300 Rh6CG431400 Rh6DG417300
rosa_wichuraiana	Rw6G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	4 cut(s)	411, 426, 1107, 1367
AatII	GACGTC	3 cut(s)	1030, 1176, 1527
Acc16I	TGCGCA	1 cut(s)	972
Acc65I	GGTACC	1 cut(s)	1236
AccB1I	GGYRCC	3 cut(s)	396, 873, 1236
AccII	CGCG	2 cut(s)	129, 189
AciI	CCGC	6 cut(s)	142, 158, 187, 1046, 1372, 1510
AclWI	GGATC	1 cut(s)	173
AcoI	YGGCCR	1 cut(s)	1345
AcsI	RAATTY	1 cut(s)	1083
AcuI	CTGAAG	3 cut(s)	174, 965, 1162
AcvI	CACGTG	1 cut(s)	1166
AcyI	GRCGYC	4 cut(s)	397, 1027, 1173, 1524
AdeI	CACNNNGTG	2 cut(s)	1294, 1411
AfaI	GTAC	3 cut(s)	1238, 1298, 1445
AfeI	AGCGCT	2 cut(s)	1252, 1318
AfiI	CCNNNNNNNGG	3 cut(s)	835, 1190, 1561
AgsI	TTSAA	7 cut(s)	149, 221, 236, 925, 1282, 1456, 1614
AjiI	CACGTC	1 cut(s)	794
AjnI	CCWGG	7 cut(s)	173, 325, 828, 834, 1347, 1374, 1461
Alw21I	GWGCWC	1 cut(s)	1610
Alw26I	GTCTC	3 cut(s)	332, 1084, 1586
AlwI	GGATC	1 cut(s)	173
Aor51HI	AGCGCT	2 cut(s)	1252, 1318
AoxI	GGCC	9 cut(s)	244, 487, 523, 781, 811, 1157, 1345, 1350, 1492
ApeKI	GCWGC	5 cut(s)	57, 65, 388, 973, 976
ApoI	RAATTY	1 cut(s)	1083
ArsI	GACNNNNNNTTYG	4 cut(s)	757, 789, 1585, 1617
Asp718I	GGTACC	1 cut(s)	1236
AspA2I	CCTAGG	1 cut(s)	710
AspLEI	GCGC	5 cut(s)	206, 399, 973, 1253, 1319
AspS9I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1497
AsuHPI	GGTGA	4 cut(s)	220, 602, 610, 653
AsuII	TTCGAA	2 cut(s)	345, 546
AsuNHI	GCTAGC	1 cut(s)	1424
AvaII	GGWCC	5 cut(s)	627, 826, 832, 838, 1497
AvrII	CCTAGG	1 cut(s)	710
BaeGI	GKGCMC	1 cut(s)	1516
BanI	GGYRCC	3 cut(s)	396, 873, 1236
BanII	GRGCYC	1 cut(s)	1610
BarI	GAAGNNNNNNTAC	2 cut(s)	1436, 1468
BbrPI	CACGTG	1 cut(s)	1166
BbsI	GAAGAC	3 cut(s)	659, 1168, 1611
Bbv12I	GWGCWC	1 cut(s)	1610
BbvCI	CCTCAGC	1 cut(s)	1247
BbvI	GCAGC	5 cut(s)	44, 77, 400, 985, 988
BccI	CCATC	1 cut(s)	1361
BceAI	ACGGC	2 cut(s)	1360, 1450
BcgI	CGANNNNNNTGC	2 cut(s)	1430, 1464
BciT130I	CCWGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
BcoDI	GTCTC	3 cut(s)	332, 1084, 1586
BfaI	CTAG	5 cut(s)	110, 554, 711, 1320, 1425
BfmI	CTRYAG	1 cut(s)	12
BfoI	RGCGCY	3 cut(s)	400, 1254, 1320
BisI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
BlnI	CCTAGG	1 cut(s)	710
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	6 cut(s)	59, 67, 390, 975, 978, 1047
Bme1390I	CCNGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
Bme18I	GGWCC	5 cut(s)	627, 826, 832, 838, 1497
BmgBI	CACGTC	1 cut(s)	794
BmgT120I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1497
BmiI	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
BmrFI	CCNGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
BmsI	GCATC	1 cut(s)	1206
BmtI	GCTAGC	1 cut(s)	1428
BoxI	GACNNNNGTC	1 cut(s)	1502
BpiI	GAAGAC	3 cut(s)	659, 1168, 1611
Bpu10I	CCTNAGC	1 cut(s)	1247
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
Bpu14I	TTCGAA	2 cut(s)	345, 546
BpuEI	CTTGAG	1 cut(s)	1133
BsaAI	YACGTR	1 cut(s)	1166
BsaHI	GRCGYC	4 cut(s)	397, 1027, 1173, 1524
BsaJI	CCNNGG	7 cut(s)	174, 295, 400, 490, 710, 1375, 1461
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	3 cut(s)	835, 1190, 1561
Bse118I	RCCGGY	1 cut(s)	1190
Bse1I	ACTGG	3 cut(s)	199, 629, 1136
BseBI	CCWGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
BseDI	CCNNGG	7 cut(s)	174, 295, 400, 490, 710, 1375, 1461
BseLI	CCNNNNNNNGG	3 cut(s)	835, 1190, 1561
BseMII	CTCAG	6 cut(s)	95, 327, 1223, 1245, 1261, 1515
BseNI	ACTGG	3 cut(s)	199, 629, 1136
BseRI	GAGGAG	2 cut(s)	926, 1648
BseSI	GKGCMC	1 cut(s)	1516
BseXI	GCAGC	5 cut(s)	44, 77, 400, 985, 988
Bsh1236I	CGCG	2 cut(s)	129, 189
Bsh1285I	CGRYCG	1 cut(s)	1195
BshFI	GGCC	9 cut(s)	246, 489, 525, 783, 813, 1159, 1347, 1352, 1494
BshNI	GGYRCC	3 cut(s)	396, 873, 1236
BsiEI	CGRYCG	1 cut(s)	1195
BsiHKAI	GWGCWC	1 cut(s)	1610
BsiSI	CCGG	3 cut(s)	612, 1191, 1495
BslFI	GGGAC	8 cut(s)	191, 492, 546, 839, 999, 1113, 1167, 1392
BslI	CCNNNNNNNGG	3 cut(s)	835, 1190, 1561
BsmAI	GTCTC	3 cut(s)	332, 1084, 1586
BsmFI	GGGAC	8 cut(s)	191, 492, 546, 839, 999, 1113, 1167, 1392
BsnI	GGCC	9 cut(s)	246, 489, 525, 783, 813, 1159, 1347, 1352, 1494
Bsp119I	TTCGAA	2 cut(s)	345, 546
Bsp1286I	GDGCHC	2 cut(s)	1516, 1610
Bsp143I	GATC	4 cut(s)	112, 165, 700, 1137
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
Bsp19I	CCATGG	2 cut(s)	400, 490
Bsp68I	TCGCGA	1 cut(s)	129
BspACI	CCGC	6 cut(s)	142, 158, 187, 1046, 1372, 1510
BspANI	GGCC	9 cut(s)	246, 489, 525, 783, 813, 1159, 1347, 1352, 1494
BspCNI	CTCAG	6 cut(s)	94, 328, 1224, 1246, 1260, 1514
BspFNI	CGCG	2 cut(s)	129, 189
BspLI	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
BspOI	GCTAGC	1 cut(s)	1428
BspPI	GGATC	1 cut(s)	173
BspQI	GCTCTTC	2 cut(s)	1391, 1615
BspT104I	TTCGAA	2 cut(s)	345, 546
BspT107I	GGYRCC	3 cut(s)	396, 873, 1236
BsrFI	RCCGGY	1 cut(s)	1190
BsrI	ACTGG	3 cut(s)	199, 629, 1136
BssAI	RCCGGY	1 cut(s)	1190
BssECI	CCNNGG	7 cut(s)	174, 295, 400, 490, 710, 1375, 1461
BssMI	GATC	4 cut(s)	112, 165, 700, 1137
BssNI	GRCGYC	4 cut(s)	397, 1027, 1173, 1524
BssT1I	CCWWGG	4 cut(s)	295, 400, 490, 710
Bst2UI	CCWGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
Bst4CI	ACNGT	4 cut(s)	319, 641, 1053, 1597
Bst6I	CTCTTC	4 cut(s)	53, 438, 1391, 1615
BstACI	GRCGYC	4 cut(s)	397, 1027, 1173, 1524
BstBAI	YACGTR	1 cut(s)	1166
BstBI	TTCGAA	2 cut(s)	345, 546
BstDEI	CTNAG	8 cut(s)	6, 61, 81, 336, 1232, 1247, 1254, 1501
BstDSI	CCRYGG	2 cut(s)	400, 490
BstEII	GGTNACC	2 cut(s)	641, 731
BstFNI	CGCG	2 cut(s)	129, 189
BstH2I	RGCGCY	3 cut(s)	400, 1254, 1320
BstHHI	GCGC	5 cut(s)	206, 399, 973, 1253, 1319
BstKTI	GATC	4 cut(s)	115, 168, 703, 1140
BstMAI	GTCTC	3 cut(s)	332, 1084, 1586
BstMBI	GATC	4 cut(s)	112, 165, 700, 1137
BstMCI	CGRYCG	1 cut(s)	1195
BstMWI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 608, 886, 1434
BstNI	CCWGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
BstPAI	GACNNNNGTC	1 cut(s)	1502
BstPI	GGTNACC	2 cut(s)	641, 731
BstSCI	CCNGG	7 cut(s)	173, 325, 828, 834, 1347, 1374, 1461
BstSFI	CTRYAG	1 cut(s)	12
BstSLI	GKGCMC	1 cut(s)	1516
BstUI	CGCG	2 cut(s)	129, 189
BstV1I	GCAGC	5 cut(s)	44, 77, 400, 985, 988
BstV2I	GAAGAC	3 cut(s)	659, 1168, 1611
BstXI	CCANNNNNNTGG	2 cut(s)	206, 302
BsuRI	GGCC	9 cut(s)	246, 489, 525, 783, 813, 1159, 1347, 1352, 1494
BtgI	CCRYGG	2 cut(s)	400, 490
BtrI	CACGTC	1 cut(s)	794
BtsI	GCAGTG	1 cut(s)	1416
BtsIMutI	CAGTG	2 cut(s)	206, 1416
BtuMI	TCGCGA	1 cut(s)	129
CfoI	GCGC	5 cut(s)	206, 399, 973, 1253, 1319
Cfr10I	RCCGGY	1 cut(s)	1190
Cfr13I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1497
CseI	GACGC	2 cut(s)	585, 953
Csp6I	GTAC	3 cut(s)	1237, 1297, 1444
CviAII	CATG	4 cut(s)	401, 491, 500, 890
CviQI	GTAC	3 cut(s)	1237, 1297, 1444
DdeI	CTNAG	8 cut(s)	6, 61, 81, 336, 1232, 1247, 1254, 1501
DinI	GGCGCC	1 cut(s)	398
DpnI	GATC	4 cut(s)	114, 167, 702, 1139
DpnII	GATC	4 cut(s)	112, 165, 700, 1137
DraIII	CACNNNGTG	2 cut(s)	1294, 1411
DrdI	GACNNNNNNGTC	4 cut(s)	411, 426, 1107, 1367
DseDI	GACNNNNNNGTC	4 cut(s)	411, 426, 1107, 1367
EaeI	YGGCCR	1 cut(s)	1345
Eam1104I	CTCTTC	4 cut(s)	53, 438, 1391, 1615
EarI	CTCTTC	4 cut(s)	53, 438, 1391, 1615
EciI	GGCGGA	1 cut(s)	1361
Ecl136II	GAGCTC	1 cut(s)	1608
Eco130I	CCWWGG	4 cut(s)	295, 400, 490, 710
Eco147I	AGGCCT	1 cut(s)	1159
Eco24I	GRGCYC	1 cut(s)	1610
Eco47I	GGWCC	5 cut(s)	627, 826, 832, 838, 1497
Eco47III	AGCGCT	2 cut(s)	1252, 1318
Eco53kI	GAGCTC	1 cut(s)	1608
Eco57I	CTGAAG	3 cut(s)	174, 965, 1162
Eco72I	CACGTG	1 cut(s)	1166
Eco91I	GGTNACC	2 cut(s)	641, 731
EcoICRI	GAGCTC	1 cut(s)	1608
EcoO65I	GGTNACC	2 cut(s)	641, 731
EcoRI	GAATTC	1 cut(s)	1083
EcoRII	CCWGG	7 cut(s)	173, 325, 828, 834, 1347, 1374, 1461
EcoT14I	CCWWGG	4 cut(s)	295, 400, 490, 710
EcoT38I	GRGCYC	1 cut(s)	1610
EgeI	GGCGCC	1 cut(s)	398
EheI	GGCGCC	1 cut(s)	398
ErhI	CCWWGG	4 cut(s)	295, 400, 490, 710
FaeI	CATG	4 cut(s)	404, 494, 503, 893
FaiI	YATR	8 cut(s)	14, 290, 402, 492, 501, 581, 891, 1543
FaqI	GGGAC	8 cut(s)	191, 492, 546, 839, 999, 1113, 1167, 1392
FatI	CATG	4 cut(s)	400, 490, 499, 889
FauI	CCCGC	2 cut(s)	151, 1503
Fnu4HI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
FriOI	GRGCYC	1 cut(s)	1610
Fsp4HI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
FspBI	CTAG	5 cut(s)	110, 554, 711, 1320, 1425
FspI	TGCGCA	1 cut(s)	972
GlaI	GCGC	5 cut(s)	205, 398, 972, 1252, 1318
GluI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
HaeII	RGCGCY	3 cut(s)	400, 1254, 1320
HaeIII	GGCC	9 cut(s)	246, 489, 525, 783, 813, 1159, 1347, 1352, 1494
HapII	CCGG	3 cut(s)	612, 1191, 1495
HgaI	GACGC	2 cut(s)	585, 953
HhaI	GCGC	5 cut(s)	206, 399, 973, 1253, 1319
Hin1I	GRCGYC	4 cut(s)	397, 1027, 1173, 1524
Hin1II	CATG	4 cut(s)	404, 494, 503, 893
Hin6I	GCGC	5 cut(s)	204, 397, 971, 1251, 1317
HinP1I	GCGC	5 cut(s)	204, 397, 971, 1251, 1317
HincII	GTYRAC	1 cut(s)	431
HindII	GTYRAC	1 cut(s)	431
HinfI	GANTC	7 cut(s)	170, 225, 350, 615, 717, 772, 1570
HpaII	CCGG	3 cut(s)	612, 1191, 1495
HphI	GGTGA	4 cut(s)	220, 602, 610, 653
Hpy166II	GTNNAC	5 cut(s)	419, 431, 797, 1297, 1336
Hpy188I	TCNGA	7 cut(s)	355, 364, 951, 1016, 1089, 1142, 1233
Hpy188III	TCNNGA	6 cut(s)	128, 335, 671, 1031, 1112, 1456
Hpy8I	GTNNAC	5 cut(s)	419, 431, 797, 1297, 1336
Hpy99I	CGWCG	4 cut(s)	194, 579, 1526, 1529
HpyAV	CCTTC	9 cut(s)	257, 267, 562, 581, 771, 858, 1057, 1170, 1462
HpyCH4III	ACNGT	4 cut(s)	319, 641, 1053, 1597
HpyCH4IV	ACGT	7 cut(s)	793, 1027, 1165, 1173, 1302, 1446, 1524
HpyCH4V	TGCA	1 cut(s)	1128
HpyF10VI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 608, 886, 1434
HpyF3I	CTNAG	8 cut(s)	6, 61, 81, 336, 1232, 1247, 1254, 1501
HpySE526I	ACGT	7 cut(s)	793, 1027, 1165, 1173, 1302, 1446, 1524
Hsp92I	GRCGYC	4 cut(s)	397, 1027, 1173, 1524
Hsp92II	CATG	4 cut(s)	404, 494, 503, 893
HspAI	GCGC	5 cut(s)	204, 397, 971, 1251, 1317
KasI	GGCGCC	1 cut(s)	396
KpnI	GGTACC	1 cut(s)	1240
Kzo9I	GATC	4 cut(s)	112, 165, 700, 1137
LguI	GCTCTTC	2 cut(s)	1391, 1615
LmnI	GCTCC	5 cut(s)	123, 277, 867, 939, 1635
Lsp1109I	GCAGC	5 cut(s)	44, 77, 400, 985, 988
LweI	GCATC	1 cut(s)	1206
MaeI	CTAG	5 cut(s)	110, 554, 711, 1320, 1425
MaeII	ACGT	7 cut(s)	793, 1027, 1165, 1173, 1302, 1446, 1524
MaeIII	GTNAC	6 cut(s)	616, 641, 704, 731, 1053, 1413
MalI	GATC	4 cut(s)	114, 167, 702, 1139
MboI	GATC	4 cut(s)	112, 165, 700, 1137
MhlI	GDGCHC	2 cut(s)	1516, 1610
MluCI	AATT	1 cut(s)	1083
Mly113I	GGCGCC	1 cut(s)	397
MlyI	GAGTC	3 cut(s)	179, 624, 781
MseI	TTAA	3 cut(s)	750, 1218, 1479
MspA1I	CMGCKG	1 cut(s)	57
MspI	CCGG	3 cut(s)	612, 1191, 1495
MspR9I	CCNGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
MvaI	CCWGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
MvnI	CGCG	2 cut(s)	129, 189
MwoI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 608, 886, 1434
NarI	GGCGCC	1 cut(s)	397
NcoI	CCATGG	2 cut(s)	400, 490
NdeII	GATC	4 cut(s)	112, 165, 700, 1137
NheI	GCTAGC	1 cut(s)	1424
NlaIII	CATG	4 cut(s)	404, 494, 503, 893
NlaIV	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
NmuCI	GTSAC	3 cut(s)	616, 641, 1053
NruI	TCGCGA	1 cut(s)	129
NsbI	TGCGCA	1 cut(s)	972
NspV	TTCGAA	2 cut(s)	345, 546
PceI	AGGCCT	1 cut(s)	1159
PciSI	GCTCTTC	2 cut(s)	1391, 1615
PfeI	GAWTC	4 cut(s)	225, 350, 717, 1570
PflFI	GACNNNGTC	1 cut(s)	1526
PkrI	GCNGC	6 cut(s)	59, 67, 390, 975, 978, 1047
PleI	GAGTC	3 cut(s)	178, 623, 780
PluTI	GGCGCC	1 cut(s)	400
PmaCI	CACGTG	1 cut(s)	1166
PmlI	CACGTG	1 cut(s)	1166
PpsI	GAGTC	3 cut(s)	178, 623, 780
Ppu21I	YACGTR	1 cut(s)	1166
PshAI	GACNNNNGTC	1 cut(s)	1502
Psp124BI	GAGCTC	1 cut(s)	1610
Psp6I	CCWGG	7 cut(s)	173, 325, 828, 834, 1347, 1374, 1461
PspCI	CACGTG	1 cut(s)	1166
PspEI	GGTNACC	2 cut(s)	641, 731
PspGI	CCWGG	7 cut(s)	173, 325, 828, 834, 1347, 1374, 1461
PspN4I	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
PspPI	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1497
PsyI	GACNNNGTC	1 cut(s)	1526
PvuII	CAGCTG	1 cut(s)	57
RruI	TCGCGA	1 cut(s)	129
RsaI	GTAC	3 cut(s)	1238, 1298, 1445
RsaNI	GTAC	3 cut(s)	1237, 1297, 1444
SacI	GAGCTC	1 cut(s)	1610
SapI	GCTCTTC	2 cut(s)	1391, 1615
SaqAI	TTAA	3 cut(s)	750, 1218, 1479
SatI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
Sau3AI	GATC	4 cut(s)	112, 165, 700, 1137
Sau96I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1497
SchI	GAGTC	3 cut(s)	179, 624, 781
ScrFI	CCNGG	7 cut(s)	175, 327, 830, 836, 1349, 1376, 1463
SduI	GDGCHC	2 cut(s)	1516, 1610
SfaNI	GCATC	1 cut(s)	1206
SfcI	CTRYAG	1 cut(s)	12
SfoI	GGCGCC	1 cut(s)	398
SfuI	TTCGAA	2 cut(s)	345, 546
SinI	GGWCC	5 cut(s)	627, 826, 832, 838, 1497
SmlI	CTYRAG	1 cut(s)	1112
SmoI	CTYRAG	1 cut(s)	1112
Sse9I	AATT	1 cut(s)	1083
SseBI	AGGCCT	1 cut(s)	1159
SsiI	CCGC	6 cut(s)	142, 158, 187, 1046, 1372, 1510
SspDI	GGCGCC	1 cut(s)	396
SspI	AATATT	1 cut(s)	1150
SspMI	CTAG	5 cut(s)	110, 554, 711, 1320, 1425
SstI	GAGCTC	1 cut(s)	1610
StuI	AGGCCT	1 cut(s)	1159
StyD4I	CCNGG	7 cut(s)	173, 325, 828, 834, 1347, 1374, 1461
StyI	CCWWGG	4 cut(s)	295, 400, 490, 710
TaaI	ACNGT	4 cut(s)	319, 641, 1053, 1597
TaiI	ACGT	7 cut(s)	796, 1030, 1168, 1176, 1305, 1449, 1527
TaqI	TCGA	5 cut(s)	168, 345, 546, 574, 775
TaqII	GACCGA	1 cut(s)	1569
TasI	AATT	1 cut(s)	1083
TatI	WGTACW	1 cut(s)	1296
TauI	GCSGC	1 cut(s)	1048
TfiI	GAWTC	4 cut(s)	225, 350, 717, 1570
Tru1I	TTAA	3 cut(s)	750, 1218, 1479
Tru9I	TTAA	3 cut(s)	750, 1218, 1479
TscAI	CASTG	2 cut(s)	206, 1416
TseFI	GTSAC	3 cut(s)	616, 641, 1053
TseI	GCWGC	5 cut(s)	57, 65, 388, 973, 976
Tsp45I	GTSAC	3 cut(s)	616, 641, 1053
TspDTI	ATGAA	2 cut(s)	381, 1378
TspRI	CASTG	2 cut(s)	206, 1416
Tth111I	GACNNNGTC	1 cut(s)	1526
VpaK11BI	GGWCC	5 cut(s)	627, 826, 832, 838, 1497
XapI	RAATTY	1 cut(s)	1083
XcmI	CCANNNNNNNNNTGG	1 cut(s)	791
XmaJI	CCTAGG	1 cut(s)	710
XspI	CTAG	5 cut(s)	110, 554, 711, 1320, 1425
ZraI	GACGTC	3 cut(s)	1028, 1174, 1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.