Auxilin-like protein 1
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g39550 FvH4_2g39550 FvH4_2g39550 |
| malus_domestica | MD08G1028800.v1.1 MD15G1024300.v1.1 |
| prunus_persica | Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1 Prupe.1G376600_v2.0.a1 |
| pyrus_communis | pycom15g02090 |
| rosa_chinensis | RchiOBHm_Chr6g0301361 |
| rosa_laevigata | RLG00000011257 |
| rosa_multiflora | Rmu_sc0013354.1_g000026 |
| rosa_roxburghii | Rroxscaffold_7G00166880 |
| rosa_rugosa | Rorug06G0304100 Rorug06G0304200 |
| rosa_samantha | Rh6AG417600 Rh6BG424300 Rh6CG431400 Rh6DG417300 |
| rosa_wichuraiana | Rw6G036140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 500, 2692, 2857 |
| Acc16I | TGCGCA | 1 cut(s) | 1047 |
| Acc36I | ACCTGC | 5 cut(s) | 500, 545, 2692, 2857, 3316 |
| AccB1I | GGYRCC | 1 cut(s) | 155 |
| AccBSI | CCGCTC | 2 cut(s) | 557, 4792 |
| AccI | GTMKAC | 4 cut(s) | 1209, 1279, 3306, 3914 |
| AccII | CGCG | 2 cut(s) | 567, 4886 |
| AccIII | TCCGGA | 2 cut(s) | 190, 4603 |
| AcuI | CTGAAG | 8 cut(s) | 594, 849, 2559, 3399, 3543, 3605, 3702, 3771 |
| AcyI | GRCGYC | 1 cut(s) | 156 |
| AfaI | GTAC | 7 cut(s) | 8, 1704, 2832, 3442, 3964, 4914, 5174 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 3423, 3619, 4443, 5045 |
| AflIII | ACRYGT | 5 cut(s) | 2236, 2249, 2314, 2812, 2977 |
| AgeI | ACCGGT | 1 cut(s) | 4698 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2533 |
| AjnI | CCWGG | 3 cut(s) | 1596, 2727, 2892 |
| Alw21I | GWGCWC | 7 cut(s) | 233, 303, 2684, 2849, 2903, 3090, 4287 |
| Alw44I | GTGCAC | 1 cut(s) | 2899 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1432 |
| Ama87I | CYCGRG | 3 cut(s) | 1692, 3473, 4557 |
| Aor13HI | TCCGGA | 2 cut(s) | 190, 4603 |
| AoxI | GGCC | 5 cut(s) | 1631, 3182, 4001, 4434, 5036 |
| ApaLI | GTGCAC | 1 cut(s) | 2899 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2267, 2299, 3245, 3277 |
| AseI | ATTAAT | 1 cut(s) | 809 |
| AsiGI | ACCGGT | 1 cut(s) | 4698 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1614, 1964, 2090, 5219 |
| AspLEI | GCGC | 7 cut(s) | 158, 567, 569, 1048, 3242, 4676, 4742 |
| AsuII | TTCGAA | 1 cut(s) | 2019 |
| AsuNHI | GCTAGC | 2 cut(s) | 866, 1400 |
| AvaI | CYCGRG | 3 cut(s) | 1692, 3473, 4557 |
| AvaII | GGWCC | 8 cut(s) | 642, 928, 1319, 2782, 2947, 3413, 3746, 4701 |
| BaeGI | GKGCMC | 1 cut(s) | 2903 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3825, 3858 |
| BanI | GGYRCC | 1 cut(s) | 155 |
| BanII | GRGCYC | 2 cut(s) | 233, 303 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 227, 259 |
| BauI | CACGAG | 1 cut(s) | 4368 |
| BbsI | GAAGAC | 8 cut(s) | 132, 247, 1427, 1598, 1665, 2433, 3789, 4460 |
| Bbv12I | GWGCWC | 7 cut(s) | 233, 303, 2684, 2849, 2903, 3090, 4287 |
| BbvCI | CCTCAGC | 1 cut(s) | 4431 |
| BceAI | ACGGC | 2 cut(s) | 82, 274 |
| BciT130I | CCWGG | 3 cut(s) | 1598, 2729, 2894 |
| BciVI | GTATCC | 1 cut(s) | 3826 |
| BfaI | CTAG | 9 cut(s) | 867, 1401, 2808, 2973, 3423, 4251, 4680, 4712, 4836 |
| BfmI | CTRYAG | 7 cut(s) | 1647, 1974, 2058, 2864, 3310, 4083, 4626 |
| BfoI | RGCGCY | 2 cut(s) | 159, 4677 |
| BfuAI | ACCTGC | 5 cut(s) | 500, 545, 2692, 2857, 3316 |
| BfuI | GTATCC | 1 cut(s) | 3826 |
| BglII | AGATCT | 1 cut(s) | 4649 |
| BlpI | GCTNAGC | 4 cut(s) | 309, 1470, 4488, 4788 |
| Bme1390I | CCNGG | 3 cut(s) | 1598, 2729, 2894 |
| Bme18I | GGWCC | 8 cut(s) | 642, 928, 1319, 2782, 2947, 3413, 3746, 4701 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2533 |
| BmeT110I | CYCGRG | 3 cut(s) | 1692, 3473, 4557 |
| BmrFI | CCNGG | 3 cut(s) | 1598, 2729, 2894 |
| BmtI | GCTAGC | 2 cut(s) | 870, 1404 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2439 |
| BpiI | GAAGAC | 8 cut(s) | 132, 247, 1427, 1598, 1665, 2433, 3789, 4460 |
| BpmI | CTGGAG | 7 cut(s) | 717, 984, 1473, 1554, 2915, 3312, 4295 |
| Bpu10I | CCTNAGC | 3 cut(s) | 2337, 3846, 4431 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 309, 1470, 4488, 4788 |
| Bpu14I | TTCGAA | 1 cut(s) | 2019 |
| BpuEI | CTTGAG | 5 cut(s) | 1254, 2136, 2694, 2859, 4018 |
| Bsa29I | ATCGAT | 1 cut(s) | 1017 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2143, 2988, 3486 |
| BsaHI | GRCGYC | 1 cut(s) | 156 |
| BsaI | GGTCTC | 2 cut(s) | 545, 654 |
| BsaJI | CCNNGG | 4 cut(s) | 1596, 4438, 4962, 5032 |
| BsaWI | WCCGGW | 5 cut(s) | 47, 175, 190, 4603, 4698 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 67, 97, 693, 723, 1527, 1557, 3366, 3396 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 3423, 3619, 4443, 5045 |
| Bse118I | RCCGGY | 3 cut(s) | 680, 4698, 5056 |
| Bse1I | ACTGG | 6 cut(s) | 644, 842, 1490, 1537, 3105, 3891 |
| Bse3DI | GCAATG | 1 cut(s) | 5006 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2143, 2988, 3486 |
| BseAI | TCCGGA | 2 cut(s) | 190, 4603 |
| BseBI | CCWGG | 3 cut(s) | 1598, 2729, 2894 |
| BseCI | ATCGAT | 1 cut(s) | 1017 |
| BseDI | CCNNGG | 4 cut(s) | 1596, 4438, 4962, 5032 |
| BseJI | GATNNNNATC | 3 cut(s) | 2143, 2988, 3486 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 3423, 3619, 4443, 5045 |
| BseMI | GCAATG | 1 cut(s) | 5006 |
| BseNI | ACTGG | 6 cut(s) | 644, 842, 1490, 1537, 3105, 3891 |
| BsePI | GCGCGC | 1 cut(s) | 565 |
| BseSI | GKGCMC | 1 cut(s) | 2903 |
| BseYI | CCCAGC | 4 cut(s) | 1628, 2651, 3663, 4783 |
| BsgI | GTGCAG | 3 cut(s) | 2720, 4484, 5100 |
| Bsh1236I | CGCG | 2 cut(s) | 567, 4886 |
| BshFI | GGCC | 5 cut(s) | 1633, 3184, 4003, 4436, 5038 |
| BshNI | GGYRCC | 1 cut(s) | 155 |
| BshTI | ACCGGT | 1 cut(s) | 4698 |
| BshVI | ATCGAT | 1 cut(s) | 1017 |
| BsiHKAI | GWGCWC | 7 cut(s) | 233, 303, 2684, 2849, 2903, 3090, 4287 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1692, 3473, 4557 |
| BsiSI | CCGG | 8 cut(s) | 48, 153, 176, 191, 681, 4604, 4699, 5057 |
| BslFI | GGGAC | 7 cut(s) | 100, 941, 2795, 2960, 3399, 3646, 3759 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 3423, 3619, 4443, 5045 |
| BsmBI | CGTCTC | 3 cut(s) | 1409, 2390, 3890 |
| BsmFI | GGGAC | 7 cut(s) | 100, 941, 2795, 2960, 3399, 3646, 3759 |
| BsmI | GAATGC | 4 cut(s) | 517, 2664, 2738, 5160 |
| BsnI | GGCC | 5 cut(s) | 1633, 3184, 4003, 4436, 5038 |
| Bso31I | GGTCTC | 2 cut(s) | 545, 654 |
| BsoBI | CYCGRG | 3 cut(s) | 1692, 3473, 4557 |
| Bsp119I | TTCGAA | 1 cut(s) | 2019 |
| Bsp1286I | GDGCHC | 7 cut(s) | 233, 303, 2684, 2849, 2903, 3090, 4287 |
| Bsp13I | TCCGGA | 2 cut(s) | 190, 4603 |
| Bsp1407I | TGTACA | 1 cut(s) | 4912 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 309, 1470, 4488, 4788 |
| BspANI | GGCC | 5 cut(s) | 1633, 3184, 4003, 4436, 5038 |
| BspDI | ATCGAT | 1 cut(s) | 1017 |
| BspEI | TCCGGA | 2 cut(s) | 190, 4603 |
| BspFNI | CGCG | 2 cut(s) | 567, 4886 |
| BspHI | TCATGA | 1 cut(s) | 3948 |
| BspMAI | CTGCAG | 2 cut(s) | 2868, 4087 |
| BspMI | ACCTGC | 5 cut(s) | 500, 545, 2692, 2857, 3316 |
| BspOI | GCTAGC | 2 cut(s) | 870, 1404 |
| BspQI | GCTCTTC | 1 cut(s) | 5226 |
| BspT104I | TTCGAA | 1 cut(s) | 2019 |
| BspT107I | GGYRCC | 1 cut(s) | 155 |
| BspTNI | GGTCTC | 2 cut(s) | 545, 654 |
| BsrBI | CCGCTC | 2 cut(s) | 557, 4792 |
| BsrDI | GCAATG | 1 cut(s) | 5006 |
| BsrFI | RCCGGY | 3 cut(s) | 680, 4698, 5056 |
| BsrGI | TGTACA | 1 cut(s) | 4912 |
| BsrI | ACTGG | 6 cut(s) | 644, 842, 1490, 1537, 3105, 3891 |
| BssAI | RCCGGY | 3 cut(s) | 680, 4698, 5056 |
| BssECI | CCNNGG | 4 cut(s) | 1596, 4438, 4962, 5032 |
| BssHII | GCGCGC | 1 cut(s) | 565 |
| BssNAI | GTATAC | 2 cut(s) | 1280, 3915 |
| BssNI | GRCGYC | 1 cut(s) | 156 |
| BssSI | CACGAG | 1 cut(s) | 4368 |
| BssT1I | CCWWGG | 2 cut(s) | 4438, 5032 |
| Bst1107I | GTATAC | 2 cut(s) | 1280, 3915 |
| Bst2BI | CACGAG | 1 cut(s) | 4368 |
| Bst2UI | CCWGG | 3 cut(s) | 1598, 2729, 2894 |
| BstACI | GRCGYC | 1 cut(s) | 156 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 863, 1238, 4586, 4868 |
| BstAUI | TGTACA | 1 cut(s) | 4912 |
| BstBI | TTCGAA | 1 cut(s) | 2019 |
| BstFNI | CGCG | 2 cut(s) | 567, 4886 |
| BstH2I | RGCGCY | 2 cut(s) | 159, 4677 |
| BstHHI | GCGC | 7 cut(s) | 158, 567, 569, 1048, 3242, 4676, 4742 |
| BstNI | CCWGG | 3 cut(s) | 1598, 2729, 2894 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2439 |
| BstSCI | CCNGG | 3 cut(s) | 1596, 2727, 2892 |
| BstSFI | CTRYAG | 7 cut(s) | 1647, 1974, 2058, 2864, 3310, 4083, 4626 |
| BstSLI | GKGCMC | 1 cut(s) | 2903 |
| BstUI | CGCG | 2 cut(s) | 567, 4886 |
| BstV2I | GAAGAC | 8 cut(s) | 132, 247, 1427, 1598, 1665, 2433, 3789, 4460 |
| BstX2I | RGATCY | 6 cut(s) | 2801, 2966, 3210, 3609, 4649, 4748 |
| BstYI | RGATCY | 6 cut(s) | 2801, 2966, 3210, 3609, 4649, 4748 |
| BstZ17I | GTATAC | 2 cut(s) | 1280, 3915 |
| Bsu15I | ATCGAT | 1 cut(s) | 1017 |
| BsuI | GTATCC | 1 cut(s) | 3826 |
| BsuRI | GGCC | 5 cut(s) | 1633, 3184, 4003, 4436, 5038 |
| BsuTUI | ATCGAT | 1 cut(s) | 1017 |
| BtsI | GCAGTG | 3 cut(s) | 291, 877, 1861 |
| BveI | ACCTGC | 5 cut(s) | 500, 545, 2692, 2857, 3316 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1432 |
| CciI | TCATGA | 1 cut(s) | 3948 |
| CfoI | GCGC | 7 cut(s) | 158, 567, 569, 1048, 3242, 4676, 4742 |
| Cfr10I | RCCGGY | 3 cut(s) | 680, 4698, 5056 |
| ClaI | ATCGAT | 1 cut(s) | 1017 |
| Csp6I | GTAC | 7 cut(s) | 7, 1703, 2831, 3441, 3963, 4913, 5173 |
| CspAI | ACCGGT | 1 cut(s) | 4698 |
| CviQI | GTAC | 7 cut(s) | 7, 1703, 2831, 3441, 3963, 4913, 5173 |
| DinI | GGCGCC | 1 cut(s) | 157 |
| DraI | TTTAAA | 1 cut(s) | 1720 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2533 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2533 |
| Ecl136II | GAGCTC | 2 cut(s) | 231, 301 |
| Eco130I | CCWWGG | 2 cut(s) | 4438, 5032 |
| Eco24I | GRGCYC | 2 cut(s) | 233, 303 |
| Eco31I | GGTCTC | 2 cut(s) | 545, 654 |
| Eco32I | GATATC | 1 cut(s) | 3355 |
| Eco47I | GGWCC | 8 cut(s) | 642, 928, 1319, 2782, 2947, 3413, 3746, 4701 |
| Eco53kI | GAGCTC | 2 cut(s) | 231, 301 |
| Eco57I | CTGAAG | 8 cut(s) | 594, 849, 2559, 3399, 3543, 3605, 3702, 3771 |
| Eco88I | CYCGRG | 3 cut(s) | 1692, 3473, 4557 |
| EcoICRI | GAGCTC | 2 cut(s) | 231, 301 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2782, 2947, 3746 |
| EcoRI | GAATTC | 1 cut(s) | 278 |
| EcoRII | CCWGG | 3 cut(s) | 1596, 2727, 2892 |
| EcoRV | GATATC | 1 cut(s) | 3355 |
| EcoT14I | CCWWGG | 2 cut(s) | 4438, 5032 |
| EcoT22I | ATGCAT | 1 cut(s) | 1507 |
| EcoT38I | GRGCYC | 2 cut(s) | 233, 303 |
| EgeI | GGCGCC | 1 cut(s) | 157 |
| EheI | GGCGCC | 1 cut(s) | 157 |
| ErhI | CCWWGG | 2 cut(s) | 4438, 5032 |
| Esp3I | CGTCTC | 3 cut(s) | 1409, 2390, 3890 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 4639, 4671 |
| FaqI | GGGAC | 7 cut(s) | 100, 941, 2795, 2960, 3399, 3646, 3759 |
| FauI | CCCGC | 1 cut(s) | 125 |
| FauNDI | CATATG | 1 cut(s) | 2410 |
| FblI | GTMKAC | 4 cut(s) | 1209, 1279, 3306, 3914 |
| FriOI | GRGCYC | 2 cut(s) | 233, 303 |
| FspBI | CTAG | 9 cut(s) | 867, 1401, 2808, 2973, 3423, 4251, 4680, 4712, 4836 |
| FspI | TGCGCA | 1 cut(s) | 1047 |
| GlaI | GCGC | 7 cut(s) | 157, 566, 568, 1047, 3241, 4675, 4741 |
| GsaI | CCCAGC | 4 cut(s) | 1632, 2655, 3667, 4787 |
| GsuI | CTGGAG | 7 cut(s) | 717, 984, 1473, 1554, 2915, 3312, 4295 |
| HaeII | RGCGCY | 2 cut(s) | 159, 4677 |
| HaeIII | GGCC | 5 cut(s) | 1633, 3184, 4003, 4436, 5038 |
| HapII | CCGG | 8 cut(s) | 48, 153, 176, 191, 681, 4604, 4699, 5057 |
| HhaI | GCGC | 7 cut(s) | 158, 567, 569, 1048, 3242, 4676, 4742 |
| Hin1I | GRCGYC | 1 cut(s) | 156 |
| Hin6I | GCGC | 7 cut(s) | 156, 565, 567, 1046, 3240, 4674, 4740 |
| HinP1I | GCGC | 7 cut(s) | 156, 565, 567, 1046, 3240, 4674, 4740 |
| HindIII | AAGCTT | 5 cut(s) | 236, 2222, 2552, 3284, 5100 |
| HpaII | CCGG | 8 cut(s) | 48, 153, 176, 191, 681, 4604, 4699, 5057 |
| Hpy99I | CGWCG | 2 cut(s) | 68, 610 |
| HpyCH4IV | ACGT | 4 cut(s) | 3696, 3780, 4525, 4867 |
| HpySE526I | ACGT | 4 cut(s) | 3696, 3780, 4525, 4867 |
| Hsp92I | GRCGYC | 1 cut(s) | 156 |
| HspAI | GCGC | 7 cut(s) | 156, 565, 567, 1046, 3240, 4674, 4740 |
| KasI | GGCGCC | 1 cut(s) | 155 |
| Kpn2I | TCCGGA | 2 cut(s) | 190, 4603 |
| KroI | GCCGGC | 1 cut(s) | 680 |
| KroNI | GCCGGC | 1 cut(s) | 682 |
| LguI | GCTCTTC | 1 cut(s) | 5226 |
| LmnI | GCTCC | 9 cut(s) | 88, 155, 193, 228, 298, 562, 2200, 3374, 4270 |
| MaeI | CTAG | 9 cut(s) | 867, 1401, 2808, 2973, 3423, 4251, 4680, 4712, 4836 |
| MaeII | ACGT | 4 cut(s) | 3696, 3780, 4525, 4867 |
| MbiI | CCGCTC | 2 cut(s) | 557, 4792 |
| MfeI | CAATTG | 1 cut(s) | 744 |
| MflI | RGATCY | 6 cut(s) | 2801, 2966, 3210, 3609, 4649, 4748 |
| MhlI | GDGCHC | 7 cut(s) | 233, 303, 2684, 2849, 2903, 3090, 4287 |
| Mly113I | GGCGCC | 1 cut(s) | 156 |
| MmeI | TCCRAC | 3 cut(s) | 1754, 2083, 4821 |
| Mph1103I | ATGCAT | 1 cut(s) | 1507 |
| MroI | TCCGGA | 2 cut(s) | 190, 4603 |
| MroNI | GCCGGC | 1 cut(s) | 680 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1614, 1964, 2090, 5219 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1743 |
| MspA1I | CMGCKG | 4 cut(s) | 671, 1229, 1469, 4787 |
| MspI | CCGG | 8 cut(s) | 48, 153, 176, 191, 681, 4604, 4699, 5057 |
| MspR9I | CCNGG | 3 cut(s) | 1598, 2729, 2894 |
| MunI | CAATTG | 1 cut(s) | 744 |
| Mva1269I | GAATGC | 4 cut(s) | 517, 2664, 2738, 5160 |
| MvaI | CCWGG | 3 cut(s) | 1598, 2729, 2894 |
| MvnI | CGCG | 2 cut(s) | 567, 4886 |
| NaeI | GCCGGC | 1 cut(s) | 682 |
| NarI | GGCGCC | 1 cut(s) | 156 |
| NdeI | CATATG | 1 cut(s) | 2410 |
| NgoMIV | GCCGGC | 1 cut(s) | 680 |
| NheI | GCTAGC | 2 cut(s) | 866, 1400 |
| NmeAIII | GCCGAG | 1 cut(s) | 4987 |
| NmuCI | GTSAC | 7 cut(s) | 50, 369, 2600, 2704, 2869, 3251, 4013 |
| NsbI | TGCGCA | 1 cut(s) | 1047 |
| NsiI | ATGCAT | 1 cut(s) | 1507 |
| NspV | TTCGAA | 1 cut(s) | 2019 |
| PaeI | GCATGC | 2 cut(s) | 1090, 2383 |
| PaeR7I | CTCGAG | 2 cut(s) | 1692, 3473 |
| PagI | TCATGA | 1 cut(s) | 3948 |
| PaqCI | CACCTGC | 3 cut(s) | 500, 2692, 2857 |
| PauI | GCGCGC | 1 cut(s) | 565 |
| PciI | ACATGT | 5 cut(s) | 2236, 2249, 2314, 2812, 2977 |
| PciSI | GCTCTTC | 1 cut(s) | 5226 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 110, 611, 4357, 4366 |
| PctI | GAATGC | 4 cut(s) | 517, 2664, 2738, 5160 |
| PdiI | GCCGGC | 1 cut(s) | 682 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1614, 1964, 2090, 5219 |
| PinAI | ACCGGT | 1 cut(s) | 4698 |
| PluTI | GGCGCC | 1 cut(s) | 159 |
| PpuMI | RGGWCCY | 3 cut(s) | 2782, 2947, 3746 |
| PscI | ACATGT | 5 cut(s) | 2236, 2249, 2314, 2812, 2977 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2439 |
| PshBI | ATTAAT | 1 cut(s) | 809 |
| Psp124BI | GAGCTC | 2 cut(s) | 233, 303 |
| Psp5II | RGGWCCY | 3 cut(s) | 2782, 2947, 3746 |
| Psp6I | CCWGG | 3 cut(s) | 1596, 2727, 2892 |
| PspFI | CCCAGC | 4 cut(s) | 1628, 2651, 3663, 4783 |
| PspGI | CCWGG | 3 cut(s) | 1596, 2727, 2892 |
| PspPPI | RGGWCCY | 3 cut(s) | 2782, 2947, 3746 |
| PspXI | VCTCGAGB | 1 cut(s) | 3473 |
| PstI | CTGCAG | 2 cut(s) | 2868, 4087 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1432 |
| PsuI | RGATCY | 6 cut(s) | 2801, 2966, 3210, 3609, 4649, 4748 |
| PteI | GCGCGC | 1 cut(s) | 565 |
| PvuII | CAGCTG | 3 cut(s) | 671, 1229, 4787 |
| RsaI | GTAC | 7 cut(s) | 8, 1704, 2832, 3442, 3964, 4914, 5174 |
| RsaNI | GTAC | 7 cut(s) | 7, 1703, 2831, 3441, 3963, 4913, 5173 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1743 |
| SacI | GAGCTC | 2 cut(s) | 233, 303 |
| SapI | GCTCTTC | 1 cut(s) | 5226 |
| ScrFI | CCNGG | 3 cut(s) | 1598, 2729, 2894 |
| SduI | GDGCHC | 7 cut(s) | 233, 303, 2684, 2849, 2903, 3090, 4287 |
| SfcI | CTRYAG | 7 cut(s) | 1647, 1974, 2058, 2864, 3310, 4083, 4626 |
| SfoI | GGCGCC | 1 cut(s) | 157 |
| Sfr274I | CTCGAG | 2 cut(s) | 1692, 3473 |
| SfuI | TTCGAA | 1 cut(s) | 2019 |
| SinI | GGWCC | 8 cut(s) | 642, 928, 1319, 2782, 2947, 3413, 3746, 4701 |
| SlaI | CTCGAG | 2 cut(s) | 1692, 3473 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1743 |
| SmlI | CTYRAG | 7 cut(s) | 1269, 1692, 2151, 2709, 2874, 3473, 3997 |
| SmoI | CTYRAG | 7 cut(s) | 1269, 1692, 2151, 2709, 2874, 3473, 3997 |
| SphI | GCATGC | 2 cut(s) | 1090, 2383 |
| SspDI | GGCGCC | 1 cut(s) | 155 |
| SspI | AATATT | 4 cut(s) | 412, 2098, 3787, 4613 |
| SspMI | CTAG | 9 cut(s) | 867, 1401, 2808, 2973, 3423, 4251, 4680, 4712, 4836 |
| SstI | GAGCTC | 2 cut(s) | 233, 303 |
| StyD4I | CCNGG | 3 cut(s) | 1596, 2727, 2892 |
| StyI | CCWWGG | 2 cut(s) | 4438, 5032 |
| TaiI | ACGT | 4 cut(s) | 3699, 3783, 4528, 4870 |
| TaqII | GACCGA | 2 cut(s) | 678, 2584 |
| TatI | WGTACW | 5 cut(s) | 1702, 2830, 3962, 4912, 5172 |
| TauI | GCSGC | 4 cut(s) | 150, 161, 923, 4874 |
| TseFI | GTSAC | 7 cut(s) | 50, 369, 2600, 2704, 2869, 3251, 4013 |
| Tsp45I | GTSAC | 7 cut(s) | 50, 369, 2600, 2704, 2869, 3251, 4013 |
| TspGWI | ACGGA | 6 cut(s) | 634, 1926, 2018, 2414, 3914, 4870 |
| VneI | GTGCAC | 1 cut(s) | 2899 |
| VpaK11BI | GGWCC | 8 cut(s) | 642, 928, 1319, 2782, 2947, 3413, 3746, 4701 |
| VspI | ATTAAT | 1 cut(s) | 809 |
| XbaI | TCTAGA | 2 cut(s) | 4679, 4711 |
| XhoI | CTCGAG | 2 cut(s) | 1692, 3473 |
| XmiI | GTMKAC | 4 cut(s) | 1209, 1279, 3306, 3914 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1614, 1964, 2090, 5219 |
| XspI | CTAG | 9 cut(s) | 867, 1401, 2808, 2973, 3423, 4251, 4680, 4712, 4836 |
| Zsp2I | ATGCAT | 1 cut(s) | 1507 |